mRNA_H-elongata_contig48215.11970.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: D8LEZ1_ECTSI (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ1_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 1.680e-152 Identity = 242/329 (73.56%), Postives = 273/329 (82.98%), Query Frame = 1
Query: 13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEAT----PSEKGDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLVCAAGGA 987
SRVSLFDA+FPGTLPVLNASAVDQAV+ ALALGS V+R SVFERKHY+YSDLPHGYQITQQR PIA+GGSLPLIF+ P G K + + GS+ P ++GITRIQLEVDSGKSLHDR KG RS VDLNRAGTALMEIV EPEIRSAAEAGAA+RSLQL LR++G CDGNME+GSMRCDLNVSVRP+G+ +GERVEVKN+NSVR+LMTAA AEA RQ RQLE+G +ERETRGFDV+KGET+ LRRKEGS DYRFFPEPDLPPLV+T VEA++ TLPELPEATMARLS E+GL+ +LSRL+VCAAGGA
Sbjct: 51 SRVSLFDASFPGTLPVLNASAVDQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGSLPLIFDPAGPTKPKAGGAAKARSADELQGGSNDPGFHVP-AIGITRIQLEVDSGKSLHDR---KGEGAERSLVDLNRAGTALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPAGTEGLGERVEVKNMNSVRHLMTAAAAEAVRQARQLEMGEGPIERETRGFDVSKGETIHLRRKEGSVDYRFFPEPDLPPLVVTHEHVEALRATLPELPEATMARLSAEYGLAEHLSRLIVCAAGGA 375
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A3R6Z786_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Z786_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.040e-101 Identity = 186/328 (56.71%), Postives = 218/328 (66.46%), Query Frame = 1
Query: 13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEK-------GDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR--MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
SRVS FDAA PGTLP LN S V QAVRTA AL S+VN SVFERKHY+Y DLP GYQITQQR PIAS G L + T E K+ Q + + + V I RIQ+E DSGKSLH +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP + GERVEVKN+NS+R+LM A E RQ R +E G +E+ETR FD A G T +R KEG+ DYRFFPEPDLPPLVI+ V+ K +LPELP+ ARLSR++GLS S +LV
Sbjct: 41 SRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKDTAGETVARNTNFSSRKEKNAAQKQLAAADADEWVEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNSIRHLMRAVEFEMERQVRHIEATGLPIEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISATFVDDAKASLPELPDQMKARLSRDYGLSAYESAILV 360
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: W4FIX4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIX4_9STRA) HSP 1 Score: 311 bits (797), Expect = 2.460e-99 Identity = 184/328 (56.10%), Postives = 217/328 (66.16%), Query Frame = 1
Query: 13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEK-------GDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR--MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
SRVS FDAA PGTLP LN S V QAVRTA AL S+VN SVFERKHY+Y DLP GYQITQQR PIAS G L + T + K+ Q + + + V I RIQ+E DSGKSLH +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP + GERVEVKN+NS+R+LM A E RQ R +E G +E+ETR FD A G T +R KEG+ DYRFFPEPDLPPLVI+ V+ K +LPELP+ ARL R++GLS S +LV
Sbjct: 41 SRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKDTAGDTVARNTNFSSRKEKNAAQKQLAAADANEWVEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNSIRHLMRAVEFEMERQVRHIEATGLPIEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISARFVDDAKASLPELPDQMKARLGRDYGLSAYESAILV 360
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A024UAY1_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAY1_9STRA) HSP 1 Score: 308 bits (788), Expect = 5.690e-98 Identity = 182/330 (55.15%), Postives = 222/330 (67.27%), Query Frame = 1
Query: 13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEKG---------DPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR--MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
SRVS FDAA PGTLP +N + V QAVRTA AL S+VN SVFERKHY+Y DLP GYQITQQR PIAS G L + + ++ K++ Q ++ E+ + R V I RIQ+E DSGKSLH +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP GERVEVKN+NS+R+LM A E RQ + +E GR +E+ETR FD A G T +R KEG+ DYRFFPEPDLPPLVI+ A V K +LPELP+ ARL +++GL+ S +LV
Sbjct: 41 SRVSFFDAAMPGTLPSVNKACVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKHSSNDVAARNTNFSSRKEKNAAQKQLAAATEVEEGIE-RQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKSDVEAPFGERVEVKNMNSIRHLMRAVEYEMERQVQHIETTGRPIEKETRTFDAATGMTKRMRSKEGAKDYRFFPEPDLPPLVISPAFVADAKASLPELPDQMKARLVQQYGLTAYESSVLV 361
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A8K1CM91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM91_PYTOL) HSP 1 Score: 308 bits (788), Expect = 2.140e-97 Identity = 183/355 (51.55%), Postives = 225/355 (63.38%), Query Frame = 1
Query: 16 RVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATP--SEKGDPKDSPPPQGEEGSDG-----------------EQSSK---------PRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR---MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLVCAAGGA 987
VS FDAA PGTLP +N V QA+RT+LA+G+ V+ S+FERKHY+Y DLP GYQ+TQQR PIA+ G L AT +E D +G+ DG EQ +K PRSV I RIQ+E DSGKS H+ ++ + VDLNRAGTALMEIV+EP++RS EAG ++ LQ LLR LG CDGNMEEGSMRCDLNVSVR + GERVEVKN+NS+R +M AA EARRQ +E G +VERETR FD GET +R KEG+ DYRFFPEPDLPPLV+ + ++ +LPELP+A ARL+ +GL+ S +LV AG A
Sbjct: 57 HVSFFDAALPGTLPAINRECVHQAIRTSLAVGAQVHPRSIFERKHYFYCDLPLGYQLTQQRAPIATNGMLQFDLPATAVVNESADSA-----EGDAVFDGSKYKNRKEKNEALRKWKEQQAKKATTTEDIIPRSVRIARIQIEQDSGKSNHE------LEDDSTLVDLNRAGTALMEIVMEPDLRSPVEAGQVMKQLQHLLRHLGVCDGNMEEGSMRCDLNVSVRQADGAEATPFGERVEVKNMNSIRNMMRAAEYEARRQMELIEATGTQVERETRAFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVVDHNVIGSLSESLPELPDALKARLTTAYGLTPYESSVLVNEAGAA 400
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A6G0X9N4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9N4_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.040e-95 Identity = 178/333 (53.45%), Postives = 217/333 (65.17%), Query Frame = 1
Query: 1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEK-------GDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPS---GSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
L+ SRVS FDAA PGTLP +N + V QA+RTA AL S+V+ SVFERKHY+Y DLP GYQITQQR PIAS G L + + + + Q + S + + V I RIQ+E DSGKSLH +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP S G+RVEVKN+NS+R+LM A E RQ ++E G + +ETR FD G T +R KEG+ DYRFFPEPDLPPLV++ VE K +LPELP+A RLSR +GLS S +LV
Sbjct: 38 LLPNSRVSFFDAALPGTLPTVNRACVAQAIRTAHALQSDVHLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKQAQANALKNTNFTSRKEKNAALQAAQASSAAEEWIEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGKRVEVKNMNSIRHLMRAVEYEMERQIEEIERTGAPIAKETRTFDAVTGMTKRMRTKEGAKDYRFFPEPDLPPLVLSPDFVEETKQSLPELPDAMKTRLSRTYGLSSYESSVLV 362
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: T0QX86_SAPDV (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QX86_SAPDV) HSP 1 Score: 300 bits (769), Expect = 1.940e-95 Identity = 186/338 (55.03%), Postives = 220/338 (65.09%), Query Frame = 1
Query: 1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPL-IFEATP-------SEKGDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR-------MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
L+ +RVS FDAA PGTLP +N + V QAVRTA AL S+V SVFERKHY+Y DLP GYQITQQR PIA+ G L + EATP S K K++ + +D E K SV I RIQ+E DSGKS+H +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNMEEGSMRCDLNVSVRP S GERVEVKN+NS++ L+ A E RQ + G + +ETR FD A G T +R KEG+ DYRFFPEPDLPPLVIT A V+ VTLPELPE ARL +GLS + +LV
Sbjct: 40 LVPNTRVSFFDAALPGTLPSVNVACVQQAVRTARALQSDVQLRSVFERKHYFYCDLPLGYQITQQRAPIATNGVLKFQVQEATPVVQTNFTSRK--EKNAASKKAATKADDEWVEK--SVRINRIQIEQDSGKSIHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEEGSMRCDLNVSVRPKPSTLEEETSIPFGERVEVKNMNSIKNLVKAVEYEMERQVDHILATGTSITKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVITPAFVDDALVTLPELPEKMKARLRATYGLSAYEASVLV 365
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A485LE09_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE09_9STRA) HSP 1 Score: 300 bits (768), Expect = 1.370e-94 Identity = 180/336 (53.57%), Postives = 221/336 (65.77%), Query Frame = 1
Query: 1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEKG-DPKDSPPPQGEEGSDGEQSSKP---------RSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPS---GSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
L+ SRVS FDAA PGTLP +N + V QAVRTA AL S+V SVFERKHY+Y DLP GYQITQQR PIAS G L + G D +++ +E + +++ + V I RIQ+E DSGKSLH +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP S GERVEVKN+NS+R LM A E RQ ++ G +E+ETR FD G T +R KEG+ DYRFFPEPDLPPLVI+ VE K++LPELP+A RL+R++GL+ S +LV
Sbjct: 66 LVPNSRVSFFDAALPGTLPAVNRACVAQAVRTAHALQSDVQLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKKVDVNAGADVRNTNFATRKEKNAALKAASSAAATEEWIEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGERVEVKNMNSIRNLMRAVEYEMGRQVEHIQATGTPIEKETRTFDAVTGMTKRMRTKEGAKDYRFFPEPDLPPLVISPDFVEDAKLSLPELPDAMKTRLARDYGLTAYESAVLV 393
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A484EDM4_BRELC (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDM4_BRELC) HSP 1 Score: 300 bits (769), Expect = 1.890e-94 Identity = 180/357 (50.42%), Postives = 223/357 (62.46%), Query Frame = 1
Query: 16 RVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSL--PLIFEATPSEKGDPKDSPPPQGEEGSDGEQSSK-------------------PRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSG------------------SCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
VS FDAA PGTLPV+N V QA+RT LAL + V+ S+FERKHY+Y DLP GYQ+TQQR P+ASGG L L A SE + K + + + K PRSV ITRIQ+E DSGKS HD V+ A + VDLNRAGTAL+EIV+EP++RS+ EAG +R LQ LLR L CDGNMEEGSMRCDLNVSVRP+ + GERVEVKN+NS+R +M AA EARRQ +E G++V RETR FD GET +R KEG+ DYRFFPEPDLPPLV+ E ++ ++ ++PELP+A RL ++GL+ S +LV
Sbjct: 60 NVSFFDAALPGTLPVINRECVRQAIRTGLALDATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGILHFELPASAVISEHINAKCDDVTRFDTSKFKSRKEKNEALIRRKANQSAQLQEIIPRSVRITRIQIEQDSGKSNHD------VEEASTVVDLNRAGTALLEIVMEPDLRSSLEAGHVLRQLQHLLRHLNVCDGNMEEGSMRCDLNVSVRPTAMNAEADVETLHRALALRLTTPFGERVEVKNMNSIRNMMRAADYEARRQISLIENEGKEVHRETRSFDAVSGETKRMRSKEGAKDYRFFPEPDLPPLVVPEKLIQEIRDSMPELPDALKHRLCTQYGLTIYESSVLV 410
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A067DA72_SAPPC (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DA72_SAPPC) HSP 1 Score: 298 bits (764), Expect = 2.910e-94 Identity = 180/334 (53.89%), Postives = 217/334 (64.97%), Query Frame = 1
Query: 1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPL-IFEATPSEKGD---PKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR-------MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
L+ +RVS FDAA PGTLP +N + V QAVRTA AL S+V SVFERKHY+Y DLP GYQITQQR PIA+ G L + EA P + + K+ + S + +SV I RIQ+E DSGKS+H +D + VDLNRAGT LMEIV EP++RSAAEAG +R +Q LLR +GTCDGNMEEGSMRCDLNVSVRP S R GERVEVKN+NS++ L+ A E RQ + G ++ +ETR FD A G T +R KEG+ DYRFFPEPDLPPLVIT V+ TLPELPE ARL +GLS + +LV
Sbjct: 40 LVPNTRVSFFDAALPGTLPSVNTACVQQAVRTARALQSDVQLRSVFERKHYFYCDLPLGYQITQQRAPIATKGVLKFQVQEAKPVVQTNFTSRKEKNAASKKAASKADDEWVEKSVRINRIQIEQDSGKSIHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEEGSMRCDLNVSVRPKPSTREEETSIPFGERVEVKNMNSIKNLVKAVEYEMERQVDHILATGTRIAKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVITPTFVDDALATLPELPEKMKARLRATYGLSAYEASVLV 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48215.11970.1 >prot_H-elongata_contig48215.11970.1 ID=prot_H-elongata_contig48215.11970.1|Name=mRNA_H-elongata_contig48215.11970.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHback to top mRNA from alignment at H-elongata_contig48215:2089..3549- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48215.11970.1 ID=mRNA_H-elongata_contig48215.11970.1|Name=mRNA_H-elongata_contig48215.11970.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1461bp|location=Sequence derived from alignment at H-elongata_contig48215:2089..3549- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48215:2089..3549- >mRNA_H-elongata_contig48215.11970.1 ID=mRNA_H-elongata_contig48215.11970.1|Name=mRNA_H-elongata_contig48215.11970.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1974bp|location=Sequence derived from alignment at H-elongata_contig48215:2089..3549- (Himanthalia elongata Himel1 dioecious)back to top |