mRNA_H-elongata_contig48215.11970.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48215.11970.1
Unique NamemRNA_H-elongata_contig48215.11970.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: D8LEZ1_ECTSI (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ1_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 1.680e-152
Identity = 242/329 (73.56%), Postives = 273/329 (82.98%), Query Frame = 1
Query:   13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEAT----PSEKGDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLVCAAGGA 987
            SRVSLFDA+FPGTLPVLNASAVDQAV+ ALALGS V+R SVFERKHY+YSDLPHGYQITQQR PIA+GGSLPLIF+      P   G  K     + + GS+      P ++GITRIQLEVDSGKSLHDR   KG    RS VDLNRAGTALMEIV EPEIRSAAEAGAA+RSLQL LR++G CDGNME+GSMRCDLNVSVRP+G+  +GERVEVKN+NSVR+LMTAA AEA RQ RQLE+G   +ERETRGFDV+KGET+ LRRKEGS DYRFFPEPDLPPLV+T   VEA++ TLPELPEATMARLS E+GL+ +LSRL+VCAAGGA
Sbjct:   51 SRVSLFDASFPGTLPVLNASAVDQAVKAALALGSTVHRRSVFERKHYFYSDLPHGYQITQQRHPIATGGSLPLIFDPAGPTKPKAGGAAKARSADELQGGSNDPGFHVP-AIGITRIQLEVDSGKSLHDR---KGEGAERSLVDLNRAGTALMEIVFEPEIRSAAEAGAALRSLQLFLRRVGACDGNMEDGSMRCDLNVSVRPAGTEGLGERVEVKNMNSVRHLMTAAAAEAVRQARQLEMGEGPIERETRGFDVSKGETIHLRRKEGSVDYRFFPEPDLPPLVVTHEHVEALRATLPELPEATMARLSAEYGLAEHLSRLIVCAAGGA 375          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A3R6Z786_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Z786_9STRA)

HSP 1 Score: 314 bits (805), Expect = 1.040e-101
Identity = 186/328 (56.71%), Postives = 218/328 (66.46%), Query Frame = 1
Query:   13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEK-------GDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR--MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            SRVS FDAA PGTLP LN S V QAVRTA AL S+VN  SVFERKHY+Y DLP GYQITQQR PIAS G L    + T  E           K+    Q +  +        + V I RIQ+E DSGKSLH       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP  +     GERVEVKN+NS+R+LM A   E  RQ R +E  G  +E+ETR FD A G T  +R KEG+ DYRFFPEPDLPPLVI+   V+  K +LPELP+   ARLSR++GLS   S +LV
Sbjct:   41 SRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKDTAGETVARNTNFSSRKEKNAAQKQLAAADADEWVEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNSIRHLMRAVEFEMERQVRHIEATGLPIEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISATFVDDAKASLPELPDQMKARLSRDYGLSAYESAILV 360          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: W4FIX4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIX4_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.460e-99
Identity = 184/328 (56.10%), Postives = 217/328 (66.16%), Query Frame = 1
Query:   13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEK-------GDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR--MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            SRVS FDAA PGTLP LN S V QAVRTA AL S+VN  SVFERKHY+Y DLP GYQITQQR PIAS G L    + T  +           K+    Q +  +        + V I RIQ+E DSGKSLH       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP  +     GERVEVKN+NS+R+LM A   E  RQ R +E  G  +E+ETR FD A G T  +R KEG+ DYRFFPEPDLPPLVI+   V+  K +LPELP+   ARL R++GLS   S +LV
Sbjct:   41 SRVSFFDAAMPGTLPSLNRSCVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKDTAGDTVARNTNFSSRKEKNAAQKQLAAADANEWVEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKAAEEHPFGERVEVKNMNSIRHLMRAVEFEMERQVRHIEATGLPIEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISARFVDDAKASLPELPDQMKARLGRDYGLSAYESAILV 360          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A024UAY1_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAY1_9STRA)

HSP 1 Score: 308 bits (788), Expect = 5.690e-98
Identity = 182/330 (55.15%), Postives = 222/330 (67.27%), Query Frame = 1
Query:   13 SRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEKG---------DPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR--MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            SRVS FDAA PGTLP +N + V QAVRTA AL S+VN  SVFERKHY+Y DLP GYQITQQR PIAS G L    + + ++             K++   Q    ++ E+  + R V I RIQ+E DSGKSLH       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP        GERVEVKN+NS+R+LM A   E  RQ + +E  GR +E+ETR FD A G T  +R KEG+ DYRFFPEPDLPPLVI+ A V   K +LPELP+   ARL +++GL+   S +LV
Sbjct:   41 SRVSFFDAAMPGTLPSVNKACVAQAVRTAHALQSDVNLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKHSSNDVAARNTNFSSRKEKNAAQKQLAAATEVEEGIE-RQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKSDVEAPFGERVEVKNMNSIRHLMRAVEYEMERQVQHIETTGRPIEKETRTFDAATGMTKRMRSKEGAKDYRFFPEPDLPPLVISPAFVADAKASLPELPDQMKARLVQQYGLTAYESSVLV 361          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A8K1CM91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM91_PYTOL)

HSP 1 Score: 308 bits (788), Expect = 2.140e-97
Identity = 183/355 (51.55%), Postives = 225/355 (63.38%), Query Frame = 1
Query:   16 RVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATP--SEKGDPKDSPPPQGEEGSDG-----------------EQSSK---------PRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR---MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLVCAAGGA 987
             VS FDAA PGTLP +N   V QA+RT+LA+G+ V+  S+FERKHY+Y DLP GYQ+TQQR PIA+ G L     AT   +E  D       +G+   DG                 EQ +K         PRSV I RIQ+E DSGKS H+      ++   + VDLNRAGTALMEIV+EP++RS  EAG  ++ LQ LLR LG CDGNMEEGSMRCDLNVSVR +        GERVEVKN+NS+R +M AA  EARRQ   +E  G +VERETR FD   GET  +R KEG+ DYRFFPEPDLPPLV+    + ++  +LPELP+A  ARL+  +GL+   S +LV  AG A
Sbjct:   57 HVSFFDAALPGTLPAINRECVHQAIRTSLAVGAQVHPRSIFERKHYFYCDLPLGYQLTQQRAPIATNGMLQFDLPATAVVNESADSA-----EGDAVFDGSKYKNRKEKNEALRKWKEQQAKKATTTEDIIPRSVRIARIQIEQDSGKSNHE------LEDDSTLVDLNRAGTALMEIVMEPDLRSPVEAGQVMKQLQHLLRHLGVCDGNMEEGSMRCDLNVSVRQADGAEATPFGERVEVKNMNSIRNMMRAAEYEARRQMELIEATGTQVERETRAFDAVTGETKRMRSKEGAKDYRFFPEPDLPPLVVDHNVIGSLSESLPELPDALKARLTTAYGLTPYESSVLVNEAGAA 400          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A6G0X9N4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9N4_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.040e-95
Identity = 178/333 (53.45%), Postives = 217/333 (65.17%), Query Frame = 1
Query:    1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEK-------GDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPS---GSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            L+  SRVS FDAA PGTLP +N + V QA+RTA AL S+V+  SVFERKHY+Y DLP GYQITQQR PIAS G L    +   +            + +   Q  + S   +    + V I RIQ+E DSGKSLH       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP     S   G+RVEVKN+NS+R+LM A   E  RQ  ++E  G  + +ETR FD   G T  +R KEG+ DYRFFPEPDLPPLV++   VE  K +LPELP+A   RLSR +GLS   S +LV
Sbjct:   38 LLPNSRVSFFDAALPGTLPTVNRACVAQAIRTAHALQSDVHLQSVFERKHYFYCDLPLGYQITQQRAPIASNGILKFHVKQAQANALKNTNFTSRKEKNAALQAAQASSAAEEWIEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGKRVEVKNMNSIRHLMRAVEYEMERQIEEIERTGAPIAKETRTFDAVTGMTKRMRTKEGAKDYRFFPEPDLPPLVLSPDFVEETKQSLPELPDAMKTRLSRTYGLSSYESSVLV 362          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: T0QX86_SAPDV (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QX86_SAPDV)

HSP 1 Score: 300 bits (769), Expect = 1.940e-95
Identity = 186/338 (55.03%), Postives = 220/338 (65.09%), Query Frame = 1
Query:    1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPL-IFEATP-------SEKGDPKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR-------MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            L+  +RVS FDAA PGTLP +N + V QAVRTA AL S+V   SVFERKHY+Y DLP GYQITQQR PIA+ G L   + EATP       S K   K++   +    +D E   K  SV I RIQ+E DSGKS+H       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNMEEGSMRCDLNVSVRP  S          GERVEVKN+NS++ L+ A   E  RQ   +   G  + +ETR FD A G T  +R KEG+ DYRFFPEPDLPPLVIT A V+   VTLPELPE   ARL   +GLS   + +LV
Sbjct:   40 LVPNTRVSFFDAALPGTLPSVNVACVQQAVRTARALQSDVQLRSVFERKHYFYCDLPLGYQITQQRAPIATNGVLKFQVQEATPVVQTNFTSRK--EKNAASKKAATKADDEWVEK--SVRINRIQIEQDSGKSIHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEEGSMRCDLNVSVRPKPSTLEEETSIPFGERVEVKNMNSIKNLVKAVEYEMERQVDHILATGTSITKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVITPAFVDDALVTLPELPEKMKARLRATYGLSAYEASVLV 365          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A485LE09_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE09_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.370e-94
Identity = 180/336 (53.57%), Postives = 221/336 (65.77%), Query Frame = 1
Query:    1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEKG-DPKDSPPPQGEEGSDGEQSSKP---------RSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPS---GSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            L+  SRVS FDAA PGTLP +N + V QAVRTA AL S+V   SVFERKHY+Y DLP GYQITQQR PIAS G L    +      G D +++     +E +   +++           + V I RIQ+E DSGKSLH       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNME+GSMRCDLNVSVRP     S   GERVEVKN+NS+R LM A   E  RQ   ++  G  +E+ETR FD   G T  +R KEG+ DYRFFPEPDLPPLVI+   VE  K++LPELP+A   RL+R++GL+   S +LV
Sbjct:   66 LVPNSRVSFFDAALPGTLPAVNRACVAQAVRTAHALQSDVQLQSVFERKHYFYCDLPLGYQITQQRAPIASNGVLKFHVKKVDVNAGADVRNTNFATRKEKNAALKAASSAAATEEWIEKQVRINRIQIEQDSGKSLHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEDGSMRCDLNVSVRPKTDDDSAPFGERVEVKNMNSIRNLMRAVEYEMGRQVEHIQATGTPIEKETRTFDAVTGMTKRMRTKEGAKDYRFFPEPDLPPLVISPDFVEDAKLSLPELPDAMKTRLARDYGLTAYESAVLV 393          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A484EDM4_BRELC (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDM4_BRELC)

HSP 1 Score: 300 bits (769), Expect = 1.890e-94
Identity = 180/357 (50.42%), Postives = 223/357 (62.46%), Query Frame = 1
Query:   16 RVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSL--PLIFEATPSEKGDPKDSPPPQGEEGSDGEQSSK-------------------PRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSG------------------SCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
             VS FDAA PGTLPV+N   V QA+RT LAL + V+  S+FERKHY+Y DLP GYQ+TQQR P+ASGG L   L   A  SE  + K     + +      +  K                   PRSV ITRIQ+E DSGKS HD      V+ A + VDLNRAGTAL+EIV+EP++RS+ EAG  +R LQ LLR L  CDGNMEEGSMRCDLNVSVRP+                   +   GERVEVKN+NS+R +M AA  EARRQ   +E  G++V RETR FD   GET  +R KEG+ DYRFFPEPDLPPLV+ E  ++ ++ ++PELP+A   RL  ++GL+   S +LV
Sbjct:   60 NVSFFDAALPGTLPVINRECVRQAIRTGLALDATVHPRSLFERKHYFYCDLPLGYQLTQQRAPVASGGILHFELPASAVISEHINAKCDDVTRFDTSKFKSRKEKNEALIRRKANQSAQLQEIIPRSVRITRIQIEQDSGKSNHD------VEEASTVVDLNRAGTALLEIVMEPDLRSSLEAGHVLRQLQHLLRHLNVCDGNMEEGSMRCDLNVSVRPTAMNAEADVETLHRALALRLTTPFGERVEVKNMNSIRNMMRAADYEARRQISLIENEGKEVHRETRSFDAVSGETKRMRSKEGAKDYRFFPEPDLPPLVVPEKLIQEIRDSMPELPDALKHRLCTQYGLTIYESSVLV 410          
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Match: A0A067DA72_SAPPC (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DA72_SAPPC)

HSP 1 Score: 298 bits (764), Expect = 2.910e-94
Identity = 180/334 (53.89%), Postives = 217/334 (64.97%), Query Frame = 1
Query:    1 LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKHYYYSDLPHGYQITQQRKPIASGGSLPL-IFEATPSEKGD---PKDSPPPQGEEGSDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGTALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVSVRPSGSCR-------MGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERETRGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPELPEATMARLSREFGLSRNLSRLLV 969
            L+  +RVS FDAA PGTLP +N + V QAVRTA AL S+V   SVFERKHY+Y DLP GYQITQQR PIA+ G L   + EA P  + +    K+      +  S  +     +SV I RIQ+E DSGKS+H       +D   + VDLNRAGT LMEIV EP++RSAAEAG  +R +Q LLR +GTCDGNMEEGSMRCDLNVSVRP  S R        GERVEVKN+NS++ L+ A   E  RQ   +   G ++ +ETR FD A G T  +R KEG+ DYRFFPEPDLPPLVIT   V+    TLPELPE   ARL   +GLS   + +LV
Sbjct:   40 LVPNTRVSFFDAALPGTLPSVNTACVQQAVRTARALQSDVQLRSVFERKHYFYCDLPLGYQITQQRAPIATKGVLKFQVQEAKPVVQTNFTSRKEKNAASKKAASKADDEWVEKSVRINRIQIEQDSGKSIHT------LDA--THVDLNRAGTGLMEIVFEPDLRSAAEAGQVLREVQHLLRHIGTCDGNMEEGSMRCDLNVSVRPKPSTREEETSIPFGERVEVKNMNSIKNLVKAVEYEMERQVDHILATGTRIAKETRTFDAATGMTKRMRTKEGAKDYRFFPEPDLPPLVITPTFVDDALATLPELPEKMKARLRATYGLSAYEASVLV 365          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48215.11970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ1_ECTSI1.680e-15273.56Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A3R6Z786_9STRA1.040e-10156.71Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4FIX4_9STRA2.460e-9956.10Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A024UAY1_9STRA5.690e-9855.15Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A8K1CM91_PYTOL2.140e-9751.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0X9N4_9STRA1.040e-9553.45Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
T0QX86_SAPDV1.940e-9555.03Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A485LE09_9STRA1.370e-9453.57Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A484EDM4_BRELC1.890e-9450.42Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A067DA72_SAPPC2.910e-9453.89Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48215contigH-elongata_contig48215:2089..3549 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.5
Seed ortholog evalue4.1e-125
Seed eggNOG ortholog2880.D8LEZ1
Preferred namePET112
KEGG rclassRC00010
KEGG koko:K02434
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019538,GO:0019752,GO:0030956,GO:0032543,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140053,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln)
EggNOG OGsCOG0064@1,KOG2438@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAspartyl/glutamyl-tRNA amidotransferase subunit B-related
Ec32 orthologEc-21_006080.1
Exons2
Model size987
Cds size987
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930795.232891-CDS-H-elongata_contig48215:2088..23041622930795.232891-CDS-H-elongata_contig48215:2088..2304Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48215 2089..2304 -
1691679573.6249394-CDS-H-elongata_contig48215:2088..23041691679573.6249394-CDS-H-elongata_contig48215:2088..2304Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48215 2089..2304 -
1622930795.2464151-CDS-H-elongata_contig48215:2778..35491622930795.2464151-CDS-H-elongata_contig48215:2778..3549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48215 2779..3549 -
1691679573.6377125-CDS-H-elongata_contig48215:2778..35491691679573.6377125-CDS-H-elongata_contig48215:2778..3549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48215 2779..3549 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48215.11970.1prot_H-elongata_contig48215.11970.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48215 2089..3549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48215.11970.1

>prot_H-elongata_contig48215.11970.1 ID=prot_H-elongata_contig48215.11970.1|Name=mRNA_H-elongata_contig48215.11970.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp
LISCSRVSLFDAAFPGTLPVLNASAVDQAVRTALALGSNVNRCSVFERKH
YYYSDLPHGYQITQQRKPIASGGSLPLIFEATPSEKGDPKDSPPPQGEEG
SDGEQSSKPRSVGITRIQLEVDSGKSLHDRGEAKGVDTARSFVDLNRAGT
ALMEIVLEPEIRSAAEAGAAIRSLQLLLRKLGTCDGNMEEGSMRCDLNVS
VRPSGSCRMGERVEVKNLNSVRYLMTAAGAEARRQTRQLELGGRKVERET
RGFDVAKGETVLLRRKEGSADYRFFPEPDLPPLVITEAQVEAMKVTLPEL
PEATMARLSREFGLSRNLSRLLVCAAGGA
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mRNA from alignment at H-elongata_contig48215:2089..3549-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48215.11970.1 ID=mRNA_H-elongata_contig48215.11970.1|Name=mRNA_H-elongata_contig48215.11970.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1461bp|location=Sequence derived from alignment at H-elongata_contig48215:2089..3549- (Himanthalia elongata Himel1 dioecious)
TTGATATCTTGTTCCAGGGTTAGCCTGTTCGACGCAGCCTTTCCGGGTAC GCTGCCGGTGCTTAACGCCTCCGCGGTGGACCAGGCCGTCCGCACGGCGC TCGCTCTGGGTTCAAACGTGAACCGTTGTAGCGTGTTCGAGCGCAAGCAC TACTACTACAGCGACTTGCCTCACGGCTACCAGATCACGCAGCAACGGAA ACCCATCGCCTCGGGGGGGTCACTGCCCTTGATTTTCGAGGCAACGCCTT CAGAAAAAGGCGATCCAAAAGATAGCCCACCGCCCCAGGGCGAAGAGGGC AGCGACGGCGAGCAATCGTCGAAGCCGCGCTCGGTTGGCATCACTCGCAT CCAGCTCGAGGTCGACTCTGGCAAGAGCTTGCACGATCGTGGGGAGGCAA AAGGCGTAGACACGGCCCGGAGCTTCGTGGATCTTAACCGAGCCGGCACA GCCCTGATGGAGATCGTCCTCGAGCCGGAGATACGGAGCGCCGCGGAGGC AGGCGCGGCAATACGATCGCTGCAGCTGCTCCTAAGGAAACTCGGGACCT GTGACGGCAACATGGAGGAGGGCTCGATGCGCTGCGACCTAAACGTGTCC GTCAGACCCTCGGGGTCTTGTAGGATGGGAGAGAGGGTCGAGGTGAAAAA TCTGAACAGCGTAAGGTACCTCATGACAGCGGCTGGGGCGGAAGCGCGGA GGCAGACGCGACAGCTGGAGCTGGGCGGGCGTAAGGTGGAGAGAGAGACT CGTGGTTTTGACGTGGCCAAGGTGACGACGGAAAACTTGATCGCTGTGTT TCTGTTTTTTGTCTGTACGAGGAGGGCGAACTAATATTTTTCCCGGTGGA AACCCACTCCGCAATGGATAGGCACCCGATTTGTCACGATTTTGAGGCAA CGCGCAGGTATTGCGTGCAATCATCGCGGCCTGGGTTGAACCGATGCCCG GTAACCCGCCGATCAATCGTCTTGAACGGCGGGCGCTCGACCCTGTTGCG AGCGCTTAGATAACTCCTTGGTGCCCCCAGCCTCAACAACGTCAGCTCCT CGCATAATCGAGGTAGCCCTCGGTTGCTCCGCGAAACGTGCCGCTTTTGG GGAGGTGGATCAAATTTAGTACAGGGAATACCCGACCAGTCTGTCTACTA CCAGGCTGTCTTGATCACAAAATCTATCTACGGGTATATATTTGTTTTTG TTTTGTGTTTCGCTCACTCCTCTTTCTCCTTTATCTCCTCCTCAGGGTGA AACCGTCCTCCTGCGTCGCAAAGAAGGATCCGCAGACTACCGCTTCTTCC CCGAACCGGACTTGCCCCCATTAGTCATCACCGAGGCTCAGGTGGAGGCC ATGAAGGTAACCCTGCCCGAGCTGCCCGAGGCGACCATGGCGAGACTCTC GCGAGAATTTGGCCTCTCGAGGAATCTGAGCCGATTGTTGGTTTGCGCTG CTGGGGGCGCC
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Coding sequence (CDS) from alignment at H-elongata_contig48215:2089..3549-

>mRNA_H-elongata_contig48215.11970.1 ID=mRNA_H-elongata_contig48215.11970.1|Name=mRNA_H-elongata_contig48215.11970.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1974bp|location=Sequence derived from alignment at H-elongata_contig48215:2089..3549- (Himanthalia elongata Himel1 dioecious)
TTGATATCTTGTTCCAGGGTTAGCCTGTTCGACGCAGCCTTTCCGGGTAC
GCTGCCGGTGCTTAACGCCTCCGCGGTGGACCAGGCCGTCCGCACGGCGC
TCGCTCTGGGTTCAAACGTGAACCGTTGTAGCGTGTTCGAGCGCAAGCAC
TACTACTACAGCGACTTGCCTCACGGCTACCAGATCACGCAGCAACGGAA
ACCCATCGCCTCGGGGGGGTCACTGCCCTTGATTTTCGAGGCAACGCCTT
CAGAAAAAGGCGATCCAAAAGATAGCCCACCGCCCCAGGGCGAAGAGGGC
AGCGACGGCGAGCAATCGTCGAAGCCGCGCTCGGTTGGCATCACTCGCAT
CCAGCTCGAGGTCGACTCTGGCAAGAGCTTGCACGATCGTGGGGAGGCAA
AAGGCGTAGACACGGCCCGGAGCTTCGTGGATCTTAACCGAGCCGGCACA
GCCCTGATGGAGATCGTCCTCGAGCCGGAGATACGGAGCGCCGCGGAGGC
AGGCGCGGCAATACGATCGCTGCAGCTGCTCCTAAGGAAACTCGGGACCT
GTGACGGCAACATGGAGGAGGGCTCGATGCGCTGCGACCTAAACGTGTCC
GTCAGACCCTCGGGGTCTTGTAGGATGGGAGAGAGGGTCGAGGTGAAAAA
TCTGAACAGCGTAAGGTACCTCATGACAGCGGCTGGGGCGGAAGCGCGGA
GGCAGACGCGACAGCTGGAGCTGGGCGGGCGTAAGGTGGAGAGAGAGACT
CGTGGTTTTGACGTGGCCAAGTTGATATCTTGTTCCAGGGTTAGCCTGTT
CGACGCAGCCTTTCCGGGTACGCTGCCGGTGCTTAACGCCTCCGCGGTGG
ACCAGGCCGTCCGCACGGCGCTCGCTCTGGGTTCAAACGTGAACCGTTGT
AGCGTGTTCGAGCGCAAGCACTACTACTACAGCGACTTGCCTCACGGCTA
CCAGATCACGCAGCAACGGAAACCCATCGCCTCGGGGGGGTCACTGCCCT
TGATTTTCGAGGCAACGCCTTCAGAAAAAGGCGATCCAAAAGATAGCCCA
CCGCCCCAGGGCGAAGAGGGCAGCGACGGCGAGCAATCGTCGAAGCCGCG
CTCGGTTGGCATCACTCGCATCCAGCTCGAGGTCGACTCTGGCAAGAGCT
TGCACGATCGTGGGGAGGCAAAAGGCGTAGACACGGCCCGGAGCTTCGTG
GATCTTAACCGAGCCGGCACAGCCCTGATGGAGATCGTCCTCGAGCCGGA
GATACGGAGCGCCGCGGAGGCAGGCGCGGCAATACGATCGCTGCAGCTGC
TCCTAAGGAAACTCGGGACCTGTGACGGCAACATGGAGGAGGGCTCGATG
CGCTGCGACCTAAACGTGTCCGTCAGACCCTCGGGGTCTTGTAGGATGGG
AGAGAGGGTCGAGGTGAAAAATCTGAACAGCGTAAGGTACCTCATGACAG
CGGCTGGGGCGGAAGCGCGGAGGCAGACGCGACAGCTGGAGCTGGGCGGG
CGTAAGGTGGAGAGAGAGACTCGTGGTTTTGACGTGGCCAAGGGTGAAAC
CGTCCTCCTGCGTCGCAAAGAAGGATCCGCAGACTACCGCTTCTTCCCCG
AACCGGACTTGCCCCCATTAGTCATCACCGAGGCTCAGGTGGAGGCCATG
AAGGTAACCCTGCCCGAGCTGCCCGAGGCGACCATGGCGAGACTCTCGCG
AGAATTTGGCCTCTCGAGGAATCTGAGCCGATTGTTGGTTTGCGCTGCTG
GGGGCGCCGGTGAAACCGTCCTCCTGCGTCGCAAAGAAGGATCCGCAGAC
TACCGCTTCTTCCCCGAACCGGACTTGCCCCCATTAGTCATCACCGAGGC
TCAGGTGGAGGCCATGAAGGTAACCCTGCCCGAGCTGCCCGAGGCGACCA
TGGCGAGACTCTCGCGAGAATTTGGCCTCTCGAGGAATCTGAGCCGATTG
TTGGTTTGCGCTGCTGGGGGCGCC
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