mRNA_H-elongata_contig48120.11953.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48120.11953.1
Unique NamemRNA_H-elongata_contig48120.11953.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A6H5JE14_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE14_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.020e-53
Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKEDA 314
            YPMKPP+VMM+TPNGRFACSRRLCLSMSDFHPESWNP+WSVSTILMGL+SFMLD  ATLGS+TSSTAQKK+FA +SLE NCKN AFRKLFPDLVELHERRK +A
Sbjct:   64 YPMKPPSVMMMTPNGRFACSRRLCLSMSDFHPESWNPVWSVSTILMGLYSFMLDNAATLGSITSSTAQKKRFATESLEVNCKNPAFRKLFPDLVELHERRKSEA 167
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: H3GEL4_PHYRM (UBC core domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GEL4_PHYRM)

HSP 1 Score: 164 bits (415), Expect = 1.610e-43
Identity = 76/103 (73.79%), Postives = 91/103 (88.35%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 311
            YPMKPPAVMM+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML++ ATLGS+++S AQK+K+AA SLE NC NA FRKLFPDLV L E R++D
Sbjct:   64 YPMKPPAVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLESQATLGSISTSDAQKRKYAAASLETNCSNATFRKLFPDLVALQEEREKD 166
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A3M6VRT7_9STRA (UBC core domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRT7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.240e-43
Identity = 74/102 (72.55%), Postives = 90/102 (88.24%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKE 308
            YPMKPP+V+M+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++ AQKKK+AA SLE NC NA FRKLFPDLV LHE R++
Sbjct:   64 YPMKPPSVLMMTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKKKYAAASLETNCSNATFRKLFPDLVALHEEREK 165
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A7S1TQ46_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ46_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.500e-42
Identity = 74/104 (71.15%), Postives = 90/104 (86.54%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKEDA 314
            YP+KPP+++M TPNGRF  +RRLCLSMSDFHPESWNPMWSVSTIL GLFSFMLDT  TLGS+ +S A+K+  AA+SL +NCKN  FR+LFPDLVE+ E++KE+A
Sbjct:   94 YPLKPPSILMYTPNGRFKTNRRLCLSMSDFHPESWNPMWSVSTILTGLFSFMLDTAPTLGSIETSAARKRALAAESLSYNCKNEIFRELFPDLVEVCEKQKEEA 197
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A3F2RXI9_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXI9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 6.060e-42
Identity = 74/103 (71.84%), Postives = 90/103 (87.38%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 311
            YPMKPP+VMM TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+T ATLGS++++ AQK+K+AA SLE NC NA FRKLFPDLV L E+R ++
Sbjct:   64 YPMKPPSVMMTTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLETQATLGSISTTDAQKRKYAAASLEANCTNATFRKLFPDLVTLQEQRDKE 166
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: W2KBB3_PHYPR (UBC core domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2KBB3_PHYPR)

HSP 1 Score: 159 bits (403), Expect = 7.950e-42
Identity = 73/103 (70.87%), Postives = 89/103 (86.41%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 311
            YPMKPP+VMM+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++ AQK+K+A  SLE NC NA FRKLFPDLV L E R++D
Sbjct:   64 YPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKYAVASLETNCTNATFRKLFPDLVALQEEREKD 166
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A0P1AWA5_PLAHL (Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA5_PLAHL)

HSP 1 Score: 157 bits (396), Expect = 7.080e-41
Identity = 72/103 (69.90%), Postives = 88/103 (85.44%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 311
            YPMKPP+VMM+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++  QK+K+AA SLE NC NA FRKLFPDLV L   R++D
Sbjct:   60 YPMKPPSVMMITPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSMSTTDGQKRKYAATSLETNCANATFRKLFPDLVALQAEREKD 162
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BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: M4BC77_HYAAE (UBC core domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC77_HYAAE)

HSP 1 Score: 156 bits (395), Expect = 1.170e-40
Identity = 72/103 (69.90%), Postives = 88/103 (85.44%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 311
            YPMKPP+V+MLTPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML+  ATLGS++++ AQK+KFAA SLE NC NA FR LFPDLV L + R+ +
Sbjct:   64 YPMKPPSVLMLTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLENQATLGSISTTDAQKRKFAAASLETNCSNAVFRNLFPDLVALQKARERE 166
[Close]
BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A6U5LMW0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LMW0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.490e-40
Identity = 71/105 (67.62%), Postives = 88/105 (83.81%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKEDAS 317
            YP+KPP+V+M TP+GRF   RRLCLSMSD+HPESWNPMWS+STIL GLFSFM DT  TLGS+ +S + K++FA DSLEFNC+NA F+ LFPDLVEL + R+ +A+
Sbjct:   64 YPLKPPSVLMYTPSGRFMTGRRLCLSMSDYHPESWNPMWSISTILTGLFSFMNDTSPTLGSLETSDSTKREFARDSLEFNCRNATFKTLFPDLVELQDERRRNAA 168
[Close]
BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Match: A0A5D6XIA3_9STRA (UBC core domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIA3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.000e-40
Identity = 71/103 (68.93%), Postives = 89/103 (86.41%), Query Frame = 3 
Query:    3 YPMKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFMLDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKED 311
            YPMKPPAV M+TPNGRF  ++RLCLSMSDFHPE+WNPMWSVS+IL GL+SFML++  TLGS+T++ AQK+KFAA SLE NC NA FRK+FP+LV L  +R+++
Sbjct:   64 YPMKPPAVYMVTPNGRFKTNQRLCLSMSDFHPETWNPMWSVSSILTGLYSFMLESQPTLGSITTTDAQKRKFAAASLETNCANATFRKMFPELVALQRQREDE 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48120.11953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE14_9PHAE1.020e-5386.54UBC core domain-containing protein n=2 Tax=Ectocar... [more]
H3GEL4_PHYRM1.610e-4373.79UBC core domain-containing protein n=6 Tax=Phytoph... [more]
A0A3M6VRT7_9STRA7.240e-4372.55UBC core domain-containing protein n=1 Tax=Peronos... [more]
A0A7S1TQ46_9STRA1.500e-4271.15Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A3F2RXI9_9STRA6.060e-4271.84UBC core domain-containing protein n=3 Tax=Phytoph... [more]
W2KBB3_PHYPR7.950e-4270.87UBC core domain-containing protein n=12 Tax=Phytop... [more]
A0A0P1AWA5_PLAHL7.080e-4169.90Ubiquitin-conjugating enzyme e2 n=1 Tax=Plasmopara... [more]
M4BC77_HYAAE1.170e-4069.90UBC core domain-containing protein n=2 Tax=Hyalope... [more]
A0A6U5LMW0_9STRA1.490e-4067.62Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A5D6XIA3_9STRA3.000e-4068.93UBC core domain-containing protein n=1 Tax=Pythium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48120contigH-elongata_contig48120:1000..4102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.8
Seed ortholog evalue2.8e-46
Seed eggNOG ortholog2880.D7G983
KEGG koko:K04554
KEGG Pathwayko04120,ko04141,ko05012,map04120,map04141,map05012
EggNOG free text desc.ubiquitin-dependent ERAD pathway
EggNOG OGsKOG0894@1,KOG0894@2759
EC2.3.2.23
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative ubiquitin-conjugating enzyme E2
Ec32 orthologEc-13_002970.1
Exons3
Model size1725
Cds size561
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48120.11953.1prot_H-elongata_contig48120.11953.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48120 2156..4094 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930793.6228278-UTR-H-elongata_contig48120:999..21551622930793.6228278-UTR-H-elongata_contig48120:999..2155Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48120 1000..2155 -
1691679572.9341383-UTR-H-elongata_contig48120:999..21551691679572.9341383-UTR-H-elongata_contig48120:999..2155Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48120 1000..2155 -
1622930793.7007396-UTR-H-elongata_contig48120:4094..41021622930793.7007396-UTR-H-elongata_contig48120:4094..4102Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48120 4095..4102 -
1691679572.9706492-UTR-H-elongata_contig48120:4094..41021691679572.9706492-UTR-H-elongata_contig48120:4094..4102Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48120 4095..4102 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930793.6461663-CDS-H-elongata_contig48120:2155..23891622930793.6461663-CDS-H-elongata_contig48120:2155..2389Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48120 2156..2389 -
1691679572.9439259-CDS-H-elongata_contig48120:2155..23891691679572.9439259-CDS-H-elongata_contig48120:2155..2389Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48120 2156..2389 -
1622930793.6583438-CDS-H-elongata_contig48120:2604..27331622930793.6583438-CDS-H-elongata_contig48120:2604..2733Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48120 2605..2733 -
1691679572.9521482-CDS-H-elongata_contig48120:2604..27331691679572.9521482-CDS-H-elongata_contig48120:2604..2733Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48120 2605..2733 -
1622930793.6790254-CDS-H-elongata_contig48120:3896..40941622930793.6790254-CDS-H-elongata_contig48120:3896..4094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48120 3897..4094 -
1691679572.960791-CDS-H-elongata_contig48120:3896..40941691679572.960791-CDS-H-elongata_contig48120:3896..4094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48120 3897..4094 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48120.11953.1

>prot_H-elongata_contig48120.11953.1 ID=prot_H-elongata_contig48120.11953.1|Name=mRNA_H-elongata_contig48120.11953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
MKPPAVMMLTPNGRFACSRRLCLSMSDFHPESWNPMWSVSTILMGLFSFM
LDTPATLGSVTSSTAQKKKFAADSLEFNCKNAAFRKLFPDLVELHERRKE
DASTPAAGSVAGGGGNNKSTRCNSAARESGPAGGTGGSRNGGAPPKAGGV
GNARREAGGITFFWVSLGVAVGVMGVAYVFRPSLEA*
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mRNA from alignment at H-elongata_contig48120:1000..4102-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48120.11953.1 ID=mRNA_H-elongata_contig48120.11953.1|Name=mRNA_H-elongata_contig48120.11953.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3103bp|location=Sequence derived from alignment at H-elongata_contig48120:1000..4102- (Himanthalia elongata Himel1 dioecious)
AGTATCCGATGAAGCCGCCCGCGGTGATGATGCTCACCCCCAACGGGAGG
TTTGCGTGCTCGAGGAGGCTGTGTTTGAGCATGTCCGACTTCCACCCGGA
GTCGTGGAACCCCATGTGGAGCGTGAGCACGATCCTGATGGGGCTGTTTA
GCTTCATGCTCGACACCCCCGCCACCTTGGGCAGCGTCACAAGCTCGACC
GCCCAGGTACATATATCTTTCTCATATAGAGATAGATAGTGTTGATAAGG
GATGGATGTCGGATGCGATCGTTCTCTTCTACATAGCACGTTTGGAAGAT
GGGGNNNNNNNNNNTTTTTGTTGTGGTTTGTGGGGTGTTTGCGTTTTCTC
TTTCGTCGGTGCGGCGTGGGGAGGGGGGGGGGGTGGGAGGGGGGTCATAT
ATATATATATAATATATATATATGGATTCGGTTCGGTTCGGTTCGGTTCG
GTTCGGTTTGATTTGATTCGGTCCAACCGTTCGGGATATTCGTTTTTGGA
GGGTTCGAATCAACGGCCTTCTAGTATATATAGGCTCTTGTACAAGTGCG
ATAGATGCAGCTGCTATCAATAGCTTGCCGAGGCCGATAGACAAAGCTAA
GATATTCGATTTGATTCGATCCGATCCGATCCGATTCGATGGTGAGGATG
TGATGTAATCGCGCACGGAAATCTACGCGGCACTTTGGCCCTCGTGTTCT
AAAGGACCACTGCCAGCCCAGCTCAAGCTGAACGGTTCAGCTTTCCGATT
TTGATTCGGGATTAGCTTTGGTCGGATTTAGTGCGGGGCATAGAAACGTA
CACATATCAGCATGTACTGCACGTCGCTGGTTGAAAAAAAGAAATAGTTT
AATTTAATGTGAAATAGCTCGATACTATTTCTTCTGCTGGTAAAGCTCGA
TACCGTATACCGATTACCTTTAGTATGTATACCTTTCCCCATGGCATTTG
GCGTCATTTTTCCCAGTACAGTAGTTGCATCTTTTCCAGGGATGTTCACG
GGTCAAGTTTGACGGGTCGGGTCGTTGCGTGTCATCCTGGCACGCAACGA
CCCGTCAGATTTTGAGATTGCGGGTCATTGACACGCAACGACCGGTCAAA
GGCGGGTCAATGAGACGCAACGACCAGTCAGAATGTTATGACCCGTGAAC
AGCTCTGATCTTTTCCCCGGAGCACTTTTTCAATAATAATAATAATTTGC
TGTTTATTGATGGGTTTCATATTTTAGTGTGCTGTTTATTACTATTAAAT
GTTATAATAGCGGTATTATAGGCCATAATAAAATAATCTCTATCTTTTGG
CTATTGCTTATAACTTATAATATGGCGCTTGTTGTTGATTCTATGCTGTT
TATTCGTTTCAATCTGCAGAAAAAGAAATTTGCCGCGGACTCGCTGGAGT
TCAACTGCAAGAATGCGGCGTTTCGAAAGCTCTTCCCCGATCTAGTCGAG
CTTCACGAGAGACGAAAGGAAGATGCTTCGACGCCGGCAGCGGGTTCGGT
GAGTTGTTCGCGAGAGACTTTGCGACCAGTGACGTGTGATGTGTGACGTG
TGAATTCCACCGGCCAGGAACCGCTTAACGGCCCCTCTTTTCTACTCCGG
TTTCGTCTTTAATGCTAGAAAAAAGTGGCGTTTCTCTCGCCCCCCCCGTC
CCCCCCGTCCCCTCAAATCTTTACACAACAATGATCGCGAACCGTAACGC
CTCGACTTCAAAGGTCGCAGGCGGTGGTGGAAATAATAAAAGCACGCGCT
GCAACTCCGCGGCAAGGGAATCTGGGCCCGCAGGGGGAACAGGGGGTTCG
CGCAACGGGGGTGCTCCACCGAAGGCTGGAGGCGTCGGCAATGCGAGGAG
AGAAGCGGGGGGTATCACCTTCTTCTGGGTTTCTCTGGGAGTTGCGGTAG
GCGTTATGGGGGTGGCGTACGTTTTTAGACCGTCTTTGGAAGCCTGACGC
ACGATCGATTACCGGTACGGCGCGAGTGACGAGGGGTACGAGTTTGATAT
ACAGGGGATGGATGGAGCCCGCCCCCGTGTCCCAAATCCCCATGACGTCG
ACCCATCGCACGTATAGCAGCAGGAAACCGCTACTGCCCCTGTAACGAGA
TATCGGGGTTTTCGGCGGTAAATCTTTCTCTGCTCTGTTTTATTGTTGTG
CGCCCTTGTGCACGATCATTGCCCCCCCCCCTCCGGTCGGGGATACCTCT
TATGCATCCCCGGAGTGAGGAGGAGGGAGGGAGGGAGGGGGGTATGTCCA
CCGTTTTTCACCGAGGGTATCTCCACTCGATGCGGGTGGTGTATATATGT
AGTGTTGTGTTGTGTATTGCATTATGTTATTGTAGTAAAGTACAGCATAC
TCCTCTTTGCCTGGAGATTTAGCAGTAATATATATATATATACATATATA
CCCATATACAGTATTTTATATTTTGCTTTTATTTCAACCAATCGTCTGGG
AGTGTGTGCCTCAGGGGTTCAGAGCATAAAAAAAAGGGGACGGTTTGGAT
TCTTGGTTGGACGTGAAGATACGATCTTTGACGGGGGCTATGAATGAGAG
TAGCACGCGAGGGCGTTCATACCGGTGTGCGGTACTGAGGAGGAGGGGAT
GTTCGGGTTATCCCCCCTGGTGTTCGACAATCCGTGGACGATCTATGGTC
CCGCTGAGGGATCACCCCGTGGGCTCGCGCGCTTGGAGTATTGGGAACGG
CCTGGAAAGTGGTGGGTGGTAGGGGTTTTGTTTCAGGGGTCGAGTGGTCG
GGGTGGATTAAGGGGGCGCGATCGTCTGAACGGTACTGTCCCCTTATTGA
AGCTATTAACACCGATGCCTCGAGCAGGACTTGGGGAAGGCTCTTCAGGC
CGATCCGACTCGACCCCACCATTTCTCATCAGTGATGCTATCTGCTCAGG
GGGGGGTGGGGGGGGCGTGATATTGTTTGTCGTTTGCATGTGGTGCATGT
ACGCGTTTGGAACAGAAACAATCGTGAGACTTGAATTCAGAGAGTGACTG
TAAGAGATATGTCAAGAGCTCGATCAACGCCGGCCACATAAATTGGCTCG
TTTTATCTCCAAGGCTACTGAATTGTGGTGGATTTGAAATTTTAGCGCGA
ACG
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Coding sequence (CDS) from alignment at H-elongata_contig48120:1000..4102-

>mRNA_H-elongata_contig48120.11953.1 ID=mRNA_H-elongata_contig48120.11953.1|Name=mRNA_H-elongata_contig48120.11953.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at H-elongata_contig48120:1000..4102- (Himanthalia elongata Himel1 dioecious)
ATGAAGCCGCCCGCGGTGATGATGCTCACCCCCAACGGGAGGTTTGCGTG
CTCGAGGAGGCTGTGTTTGAGCATGTCCGACTTCCACCCGGAGTCGTGGA
ACCCCATGTGGAGCGTGAGCACGATCCTGATGGGGCTGTTTAGCTTCATG
CTCGACACCCCCGCCACCTTGGGCAGCGTCACAAGCTCGACCGCCCAGAT
GAAGCCGCCCGCGGTGATGATGCTCACCCCCAACGGGAGGTTTGCGTGCT
CGAGGAGGCTGTGTTTGAGCATGTCCGACTTCCACCCGGAGTCGTGGAAC
CCCATGTGGAGCGTGAGCACGATCCTGATGGGGCTGTTTAGCTTCATGCT
CGACACCCCCGCCACCTTGGGCAGCGTCACAAGCTCGACCGCCCAGAAAA
AGAAATTTGCCGCGGACTCGCTGGAGTTCAACTGCAAGAATGCGGCGTTT
CGAAAGCTCTTCCCCGATCTAGTCGAGCTTCACGAGAGACGAAAGGAAGA
TGCTTCGACGCCGGCAGCGGGTTCGAAAAAGAAATTTGCCGCGGACTCGC
TGGAGTTCAACTGCAAGAATGCGGCGTTTCGAAAGCTCTTCCCCGATCTA
GTCGAGCTTCACGAGAGACGAAAGGAAGATGCTTCGACGCCGGCAGCGGG
TTCGGTCGCAGGCGGTGGTGGAAATAATAAAAGCACGCGCTGCAACTCCG
CGGCAAGGGAATCTGGGCCCGCAGGGGGAACAGGGGGTTCGCGCAACGGG
GGTGCTCCACCGAAGGCTGGAGGCGTCGGCAATGCGAGGAGAGAAGCGGG
GGGTATCACCTTCTTCTGGGTTTCTCTGGGAGTTGCGGTAGGCGTTATGG
GGGTGGCGTACGTTTTTAGACCGTCTTTGGAAGCCTGAGTCGCAGGCGGT
GGTGGAAATAATAAAAGCACGCGCTGCAACTCCGCGGCAAGGGAATCTGG
GCCCGCAGGGGGAACAGGGGGTTCGCGCAACGGGGGTGCTCCACCGAAGG
CTGGAGGCGTCGGCAATGCGAGGAGAGAAGCGGGGGGTATCACCTTCTTC
TGGGTTTCTCTGGGAGTTGCGGTAGGCGTTATGGGGGTGGCGTACGTTTT
TAGACCGTCTTTGGAAGCCTGA
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