mRNA_H-elongata_contig48088.11948.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48088.11948.1
Unique NamemRNA_H-elongata_contig48088.11948.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: D8LL94_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL94_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 1.060e-130
Identity = 208/277 (75.09%), Postives = 244/277 (88.09%), Query Frame = 1
Query:    1 EAGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHP-GRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDSAPHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDLRLREVKK-DAILLQGGR 825
            + GVIPRAVS +LADA ARR QGWEF LTAT+VEIY+E+IRDLL+P+ND+L+V EHP GRGVEAAGA EV++++L+EA+ VL++G+ HR TAAT+MN  SSRSHSIFMLRL+Q ++V +CKVS RLTLVDLAGSERAGK G EG+ LEEA+SINVSLHTLGRVIR LS++ PHVPFRDSKLTRLLQESLGGNSRT LI+CCSP+EA A+ETLSTL FGECAKRVTTFASANVVAAPD+V+ QLSELR EVVRLKRQLHD +LRE ++ +A    GGR
Sbjct:   68 QVGVIPRAVSTLLADAEARRAQGWEFALTATYVEIYNEKIRDLLNPANDNLQVKEHPSGRGVEAAGAKEVRVTSLEEAVGVLKKGAEHRATAATLMNNVSSRSHSIFMLRLDQRDVVHDCKVSARLTLVDLAGSERAGKTGAEGKRLEEANSINVSLHTLGRVIRTLSENGPHVPFRDSKLTRLLQESLGGNSRTVLIICCSPDEAQAQETLSTLKFGECAKRVTTFASANVVAAPDKVSQQLSELRAEVVRLKRQLHDCQLREARRSEAFPSIGGR 344          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6H5KQA5_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 1.780e-115
Identity = 202/277 (72.92%), Postives = 235/277 (84.84%), Query Frame = 1
Query:    1 EAGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHP-GRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDSAPHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDLRLREVKK-DAILLQGGR 825
            E GVIPRAVS +LADA ARR QGWEF LTAT+VEIY+E+IRDLL+P+ND+L+V EHP GRGVEAAGA EV++++L+EA+ VL++G+ HR TAAT+MN  SSRSHSIFMLRL+Q     +CKVS RLTLVDLAGSERAGK G+EG+ LEEA+SINVSLHTLGRVIR LS++ PHVPFRDSKLTRLLQESLGGNSR        P+EA A+ETLSTL FGECAKRVTTFASANVVAAPD+V+ QLSELR EVVRLKRQLHD +LRE ++ +A    GGR
Sbjct:  393 EVGVIPRAVSTLLADAEARRAQGWEFALTATYVEIYNEKIRDLLNPANDNLQVKEHPSGRGVEAAGAKEVRVTSLEEAVGVLKKGAEHRATAATLMNNVSSRSHSIFMLRLDQ-----DCKVSARLTLVDLAGSERAGKTGVEGKRLEEANSINVSLHTLGRVIRTLSENGPHVPFRDSKLTRLLQESLGGNSR--------PDEAQAQETLSTLKFGECAKRVTTFASANVVAAPDKVSQQLSELRAEVVRLKRQLHDCQLREARRSEAFPSIGGR 656          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A8K0RHM3_9PLEO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0RHM3_9PLEO)

HSP 1 Score: 211 bits (538), Expect = 3.690e-63
Identity = 123/241 (51.04%), Postives = 154/241 (63.90%), Query Frame = 1
Query:    7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQL 726
            GVIPR V +V A   A      E+ +  +++EIY ERIRDLL P ND+L V E   RGV   G  EV +++ DE  +VLR G + R  +AT MN  SSRSHSIF++ + Q N+    + SG+L LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L+D  + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP   +  ETLSTL FG  AK +   A  N   +P E+ A L
Sbjct:  109 GVIPRIVQQVFASILAS-PSNIEYTVRVSYMEIYMERIRDLLMPQNDNLPVHEEKNRGVYVKGLLEVYVASDDEVYEVLRRGGAARAVSATNMNAESSRSHSIFVVTVSQKNVETGSQKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINSLTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKINAELSPAELKAML 348          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A1Y2D7F0_9FUNG (Kinesin-like protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2D7F0_9FUNG)

HSP 1 Score: 208 bits (530), Expect = 1.200e-62
Identity = 120/254 (47.24%), Postives = 166/254 (65.35%), Query Frame = 1
Query:    7 GVIPRAVSKV---LADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRL 756
            GVIPR +  +   + DA +  E    F +  +F+EIY ERIRDLL+PSND+L + E   RGV   G  EV +S++ E ++V+R G++ R+ A T MN  SSRSHSIF++ + Q +L    + SG++ LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L+D  + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP   +  ETLSTL FG  AK +   A  N   +  E+ A L+++++++  +
Sbjct:   13 GVIPRIIEAIFTTIMDAPSTIE----FTVKVSFMEIYMERIRDLLNPSNDNLPIHEEKNRGVYVKGLLEVYVSSVQEVMEVMRRGTASRVVAFTNMNAESSRSHSIFVVTVNQKDLTNGTQKSGKIYLVDLAGSEKVGKTGATGQTLEEAKKINKSLSALGMVINALTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSFNDTETLSTLRFGIRAKTIKNKAKINQELSVAELKALLTKVKKKLASM 262          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: M2V0T4_COCH5 (Kinesin-like protein (Fragment) n=2 Tax=Cochliobolus heterostrophus TaxID=5016 RepID=M2V0T4_COCH5)

HSP 1 Score: 213 bits (543), Expect = 1.730e-62
Identity = 125/248 (50.40%), Postives = 159/248 (64.11%), Query Frame = 1
Query:    7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEV 747
            GVIPR V ++ A+  A      E+ +  +++EIY ERIRDLL P ND+L V E   RGV   G  EV +S+ +E  +VLR G S R  +AT MNQ SSRSHSIF++ + Q N+      SG+L LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L+DS   H+P+RDSKLTR+LQESLGGNSRT LI+ CSP   +  ETL TL FG  AK +   A  N   +P E+ A L +++ +V
Sbjct:  101 GVIPRIVQQIFANILAS-PSNIEYTVRVSYMEIYMERIRDLLVPQNDNLPVHEEKSRGVYVKGLLEVYVSSEEEVYEVLRRGGSARAVSATNMNQESSRSHSIFVITVNQKNVETGSLKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINCLTDSKTQHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDVETLGTLRFGMRAKTIKNKAKVNAELSPAELKAMLKKVQGQV 347          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6A7C9S8_9PEZI (Kinesin-like protein n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7C9S8_9PEZI)

HSP 1 Score: 220 bits (561), Expect = 1.910e-62
Identity = 126/258 (48.84%), Postives = 167/258 (64.73%), Query Frame = 1
Query:    7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
            G+IPR +S+ + D+ AR +   EFV+  +++EIY E+IRDLL P ND+L V E   RGV   G  E  + ++ E  +VL  G   R+ AAT MNQ SSRSHSIF++ + Q N+      SGRL LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L+D  + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP   +  ET+STL FGE AK +   A  N   +P ++ A L + + +VV  ++ +H L
Sbjct:  107 GIIPR-ISEQIFDSIARADSNIEFVVKVSYMEIYMEKIRDLLVPQNDNLPVHEDKQRGVYVKGLQEFYVGSVGEVYEVLDRGGQARVVAATNMNQESSRSHSIFLIEVMQKNIETGAARSGRLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALADGRSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETISTLRFGERAKTIKQKAKINEELSPAQLKALLKQAQTQVVSFEQYIHSL 363          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: D3B313_POLPP (Kinesin family member 3 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B313_POLPP)

HSP 1 Score: 219 bits (558), Expect = 1.400e-61
Identity = 127/258 (49.22%), Postives = 167/258 (64.73%), Query Frame = 1
Query:    7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
            GVIPR ++ V  D   + ++  EF++ A+++EIY ERIRDLLD   D+LKV E  G+GV   G TEV I   D+ L+V+R G ++R  A T MN  SSRSHSIF+L ++Q NL      SG+L LVDLAGSE+  K G +G  L+EA  IN SL +LG VI  L+D  + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP   +  ETLSTL FG  AK +   A  N   +  E+   LS+  +E+  LK  + +L
Sbjct:  106 GVIPRMINTVF-DCITKADENIEFIVKASYIEIYMERIRDLLDVRKDNLKVREEKGKGVWVDGTTEVYIYREDDILEVMRAGQANRAIAETKMNAESSRSHSIFILTIQQKNLKEGSNKSGKLYLVDLAGSEKIAKTGAQGLTLDEAKMINKSLSSLGNVINALTDGKSTHIPYRDSKLTRVLQESLGGNSRTTLIINCSPSSYNETETLSTLRFGNRAKSIKNKAKINQERSAAELKILLSKAEKEIESLKDYIKEL 362          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6A6QR82_9PEZI (Kinesin-like protein n=1 Tax=Lophium mytilinum TaxID=390894 RepID=A0A6A6QR82_9PEZI)

HSP 1 Score: 218 bits (556), Expect = 1.660e-61
Identity = 125/258 (48.45%), Postives = 165/258 (63.95%), Query Frame = 1
Query:    7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
            GVIPR V+++ A   +      EF++  +++EIY ERIRDLL P ND+L V E   RGV   G  EV ++++DE  +VLR G   R  AAT MNQ SSRSHSIF++ ++Q N+       G+L LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L+D  + HVP+RDSKLTR+LQESLGGNSRT LI+ CSP   + +ETL TL FG  AK +   A  N   +P E+  QL +++ +V   +  + +L
Sbjct:  108 GVIPRIVNQIFASIMSSGSN-MEFMVQVSYMEIYMERIRDLLAPQNDNLPVHEDKTRGVYVKGLLEVYVTSVDEVYEVLRRGGMARAVAATNMNQESSRSHSIFVITIQQKNVETGSAKRGQLFLVDLAGSEKIGKTGASGQTLEEAKKINKSLSALGMVINSLTDGKSTHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDQETLGTLRFGVRAKSIKNKAKVNAELSPQELKMQLKKIQSQVTTFESYISNL 364          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A812NKF6_9DINO (Kinesin-like protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NKF6_9DINO)

HSP 1 Score: 206 bits (525), Expect = 3.260e-61
Identity = 122/246 (49.59%), Postives = 164/246 (66.67%), Query Frame = 1
Query:    4 AGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRG-VEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSEL 735
            AG+IPR V+++   A+A  E   EF +  +FVEIY ERIRDLLDPS D+L+V E P +G V     TEV +++++E L+V+  G+++R  AAT MN  SSRSHSIF++ L Q +       +GRL L DLAGSE   K G++G+ L+EA +IN SL  LG VI  L+D    HVP+RDSKLTR+LQESLGGNSRT+LI+  SP   +  ETLSTL FG+ AK +   A+ N    P+E+   ++ L
Sbjct:   94 AGIIPRVVNQIFEFASAADETV-EFTVQVSFVEIYLERIRDLLDPSKDNLQVGEDPAQGGVYIKHVTEVYVTSVEEMLEVMERGNANRAVAATGMNAGSSRSHSIFVVALTQKDSAAGETKTGRLYLCDLAGSETVNKTGVQGQQLKEAQNINKSLSALGNVINALTDGRTKHVPYRDSKLTRVLQESLGGNSRTSLIINASPAAYNQMETLSTLRFGKRAKSIKNKATINKRRTPEEMERYIAVL 338          
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6A5W984_9PLEO (Kinesin-like protein n=1 Tax=Amniculicola lignicola CBS 123094 TaxID=1392246 RepID=A0A6A5W984_9PLEO)

HSP 1 Score: 217 bits (552), Expect = 3.840e-61
Identity = 124/258 (48.06%), Postives = 164/258 (63.57%), Query Frame = 1
Query:    7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
            G+IPR V ++ A   A      E+ +  +++EIY ERIRDLL+P+ND+L V E   RGV   G  EV +S++ E  +V+R G + R  AAT MNQ SSRSHSIF++ + Q NL      SG+L LVDLAGSE+ GK G  G+ LEEA  IN SL  LG VI  L+D  + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP   +A ET+ TL FG  AK +   A  N   +P E+ A L + + +V   +  + +L
Sbjct:   54 GIIPRIVEQIFASMLAS-PSNIEYTVRVSYMEIYMERIRDLLNPANDNLPVHEEKNRGVYVKGLLEVYVSSVMEVYEVMRRGGNARAVAATNMNQESSRSHSIFVVTITQKNLETGSMKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINSLTDGRSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNAEETIGTLRFGMRAKTIKNKAKVNAELSPAELKALLKKAQSQVTNFESYIANL 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL94_ECTSI1.060e-13075.09Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KQA5_9PHAE1.780e-11572.92Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A8K0RHM3_9PLEO3.690e-6351.04P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1Y2D7F0_9FUNG1.200e-6247.24Kinesin-like protein n=1 Tax=Neocallimastix califo... [more]
M2V0T4_COCH51.730e-6250.40Kinesin-like protein (Fragment) n=2 Tax=Cochliobol... [more]
A0A6A7C9S8_9PEZI1.910e-6248.84Kinesin-like protein n=1 Tax=Piedraia hortae CBS 4... [more]
D3B313_POLPP1.400e-6149.22Kinesin family member 3 n=1 Tax=Polysphondylium pa... [more]
A0A6A6QR82_9PEZI1.660e-6148.45Kinesin-like protein n=1 Tax=Lophium mytilinum Tax... [more]
A0A812NKF6_9DINO3.260e-6149.59Kinesin-like protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A6A5W984_9PLEO3.840e-6148.06Kinesin-like protein n=1 Tax=Amniculicola lignicol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48088contigH-elongata_contig48088:863..3539 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.9
Seed ortholog evalue1.2e-109
Seed eggNOG ortholog2880.D8LL94
KEGG koko:K10396
KEGG Pathwayko04144,ko04728,map04144,map04728
GOsGO:0003674,GO:0003774,GO:0003777,GO:0003779,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005871,GO:0005875,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008574,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0030029,GO:0030036,GO:0030705,GO:0032991,GO:0033036,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046907,GO:0048471,GO:0051015,GO:0051017,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061572,GO:0071840,GO:0097435,GO:1990939
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0240@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons5
Model size828
Cds size828
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48088.11948.1prot_H-elongata_contig48088.11948.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48088 863..3539 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930793.1540985-CDS-H-elongata_contig48088:862..10181622930793.1540985-CDS-H-elongata_contig48088:862..1018Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 863..1018 +
1691679572.7555072-CDS-H-elongata_contig48088:862..10181691679572.7555072-CDS-H-elongata_contig48088:862..1018Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 863..1018 +
1622930793.1734385-CDS-H-elongata_contig48088:1291..14711622930793.1734385-CDS-H-elongata_contig48088:1291..1471Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 1292..1471 +
1691679572.765064-CDS-H-elongata_contig48088:1291..14711691679572.765064-CDS-H-elongata_contig48088:1291..1471Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 1292..1471 +
1622930793.1951373-CDS-H-elongata_contig48088:2001..22431622930793.1951373-CDS-H-elongata_contig48088:2001..2243Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 2002..2243 +
1691679572.772898-CDS-H-elongata_contig48088:2001..22431691679572.772898-CDS-H-elongata_contig48088:2001..2243Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 2002..2243 +
1622930793.211065-CDS-H-elongata_contig48088:2887..30741622930793.211065-CDS-H-elongata_contig48088:2887..3074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 2888..3074 +
1691679572.7807093-CDS-H-elongata_contig48088:2887..30741691679572.7807093-CDS-H-elongata_contig48088:2887..3074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 2888..3074 +
1622930793.2388606-CDS-H-elongata_contig48088:3476..35391622930793.2388606-CDS-H-elongata_contig48088:3476..3539Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 3477..3539 +
1691679572.7889473-CDS-H-elongata_contig48088:3476..35391691679572.7889473-CDS-H-elongata_contig48088:3476..3539Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48088 3477..3539 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48088.11948.1

>prot_H-elongata_contig48088.11948.1 ID=prot_H-elongata_contig48088.11948.1|Name=mRNA_H-elongata_contig48088.11948.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp
EAGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDS
LKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASS
RSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEAS
SINVSLHTLGRVIRKLSDSAPHVPFRDSKLTRLLQESLGGNSRTALIVCC
SPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVV
RLKRQLHDLRLREVKKDAILLQGGR*
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mRNA from alignment at H-elongata_contig48088:863..3539+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48088.11948.1 ID=mRNA_H-elongata_contig48088.11948.1|Name=mRNA_H-elongata_contig48088.11948.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2677bp|location=Sequence derived from alignment at H-elongata_contig48088:863..3539+ (Himanthalia elongata Himel1 dioecious)
GAGGCGGGGGTGATACCGAGGGCCGTGTCGAAGGTTCTGGCAGATGCGAA CGCCCGCCGGGAGCAAGGGTGGGAGTTTGTCTTGACGGCGACCTTCGTGG AAATCTACAGCGAAAGGATACGGGACCTCCTTGACCCCTCCAATGATAGC CTTAAGGTCAGTGGGAGTCTGATGCATCGGGCGAGGAAAGTGCCCCAGTT CCTTCAGCGCTTCGGACGAGCTGTGACCGACCGACAGACCGACCGAGCAC TCTGCTTTCGCCCGCGCTATGTCGGATAGTGATTAGCCTCCCAGTGTGTG GTCTGTTTCCTGAAGCTAGGCCGCCACTGCTGCTCCAAATCCATCCCTGC GCATTGAATTGACGGACTAATGACTCATGACTCATGATGGTTATACATTC AACGTTTTGCATCCGAATCGCCTCATTAGGTTACGGAGCACCCCGGACGC GGCGTGGAGGCGGCCGGTGCTACGGAAGTGCAGATTTCAACGCTGGATGA GGCCTTAGACGTGCTGCGAGAAGGGTCGAGTCACCGGATGACGGCCGCGA CGATGATGAACCAGGCGTCTAGCCGGAGCCACAGCATTTTCATGCTGAGG CTAGAACAGGTGAAGGGGTTAGACGCGCGTAGTGCCCTCCTCTTCATATT TTGGTTTCGACAATGACGGCCGGTCTACACGCGCAAGATGGCCATCTCCG TTGATACTCTAGCAGCAGGACGTGAACGAACTAGATCAGTCTGCGCTGAT TCATCAGAGCAGGAATGGGAAACGTCCTCGGATGAGAAACAAGTGGTTAG TCTTCGAGCTCCCCAACGGCGAAGCTCTTGGGAGCAGGACACGTTTTACC TCCTATACCAGCCTTAAGTTACCCGTAACTGCTGCCGTATGGGAGCGTAT GCTGTAATCGATAAAATAACGAAAAAGTGTACAGTACGGATGAACTGCAA GTACTTTTGCTGCTGCGCCACAAAACGGTCGCGCAACCCCCGATCTGTCG GTCCCTCGCCCGTTTCGCACGTCCACTTATCACCGCCACCACCCACCATC GCCCCGATCCCCGACCCTGCGTTTCGCCTCTTGATCGTGGCGCACTGCGG CGCAACGTTTCTTCTTGCAACCACGGGTGTTCCGTGTAGCACAATCTCGT GCGAAACTGTAAGGTTTCCGGCCGCCTCACCCTCGTCGATCTGGCTGGTT CGGAAAGAGCCGGCAAGGCGGGGTTGGAGGGACGGCATCTAGAAGAGGCG AGCAGCATCAACGTCAGCCTGCACACCCTGGGCAGGGTCATCCGGAAATT GAGCGACAGCGCGCCGCACGTCCCCTTCCGCGACAGCAAGCTCACGCGCC TCTTGCAGGAGTCTCTGGGGGGAAATAGCCGGTAAGGGACAGAAGTGTAC GCGTTCACATCGGCGTCGAATGAAACTTTCGGCTAGCTGCGCTATACGGG GACGCCGACGGTTTCTCTGCCTCTTGGGAGTTGGTTCCGTTATAAACCGT GAGTTCCAGTGCTTAGTGCTCTTGCGCTTTGCTCAGCAGCTGAAGCAACT ATCGAAGTTTGTCGAGGAGCTTCCCTCTGGCCTGGGTTACGCCTCGCGTA CATCTTGTGACTACGTATCAAGAAACTCGTGGCGCTGTTCCGGAAGGCGC GAGACCCGCAGTGTGTTTTTTTCCGTCGTTATCTCCAATTCGCCTGCCAA GTCTTTGCCGTTCTGTAAACACCGTTCCAAGTTCCACGAGTCCGGCATCT CTCTCCCGGTCCTTGGCTTTCGCGGCACGCCCTTCAGCCAGCGAAACCCC TGCGGCATCTTAGCCCCCGCCGTGTATCCCTTGCACACCGGCAAGTGTAG ATTGAACCTATTTATGCATATATATATATATATATATATATTGCCGTGTT TGTGTCGTGATATCGTTTACTTCGCGTTCTCCGCGCGCTTTAGTTGTTTG CACACGCCAAAACAATCACTTTGTCCCCCCGCCCCCCCCGTCCCCCCCAA AAATGCCACGCTTTTATCTCTCCAGTACGGCGCTCATCGTTTGCTGCAGC CCGGAAGAGGCGCACGCGCGGGAGACTCTCTCCACTCTAACTTTCGGCGA GTGCGCCAAACGGGTGACCACGTTCGCATCCGCAAACGTGGTCGCCGCTC CGGACGAAGTTGCCGCCCAGCTGTCGGAACTCCGGGAGGAAGTAGTCCGT CTCAAGCGGCAGGTGAAGAGTGACGGTTTTTGTTTCGCCTTTCAGTGCAT TTTTTTCCGGGGGATGATCGGTCACTGTCCAAGGTTGGGCTGCTTTGACT CGCCGCGATGTAAAATAAAATCTACCCGGTATACGTCGGCAAACAACGAA ACAAAACAAAAAAACGTCAGTTAGTTCGTTTGTTCGATGGCCTCGTGGGC CCCTGTCGGTTTTTGCCCTTACGTTTATTCCCCAATGCAGAGCTACTTAA ACGGGAGGGGATGGGGATAAGGCGTGTAGAAAGACTCGACCACAGTCATC GTTAGCAAACATCACCCCCCTCCTTCCTGCCGCCTCAAGCACCATGTAAG CCCCCGATGTTATCCCTACGATCCCGTGTTTTTTTGTTTGTTTTTTTTGC TCGCCCATGCAAAGCTACACGACCTTCGACTGCGAGAGGTGAAGAAGGAC GCCATTCTGCTGCAAGGCGGAAGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig48088:863..3539+

>mRNA_H-elongata_contig48088.11948.1 ID=mRNA_H-elongata_contig48088.11948.1|Name=mRNA_H-elongata_contig48088.11948.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig48088:863..3539+ (Himanthalia elongata Himel1 dioecious)
GAGGCGGGGGTGATACCGAGGGCCGTGTCGAAGGTTCTGGCAGATGCGAA
CGCCCGCCGGGAGCAAGGGTGGGAGTTTGTCTTGACGGCGACCTTCGTGG
AAATCTACAGCGAAAGGATACGGGACCTCCTTGACCCCTCCAATGATAGC
CTTAAGGAGGCGGGGGTGATACCGAGGGCCGTGTCGAAGGTTCTGGCAGA
TGCGAACGCCCGCCGGGAGCAAGGGTGGGAGTTTGTCTTGACGGCGACCT
TCGTGGAAATCTACAGCGAAAGGATACGGGACCTCCTTGACCCCTCCAAT
GATAGCCTTAAGGTTACGGAGCACCCCGGACGCGGCGTGGAGGCGGCCGG
TGCTACGGAAGTGCAGATTTCAACGCTGGATGAGGCCTTAGACGTGCTGC
GAGAAGGGTCGAGTCACCGGATGACGGCCGCGACGATGATGAACCAGGCG
TCTAGCCGGAGCCACAGCATTTTCATGCTGAGGCTAGAACAGGTTACGGA
GCACCCCGGACGCGGCGTGGAGGCGGCCGGTGCTACGGAAGTGCAGATTT
CAACGCTGGATGAGGCCTTAGACGTGCTGCGAGAAGGGTCGAGTCACCGG
ATGACGGCCGCGACGATGATGAACCAGGCGTCTAGCCGGAGCCACAGCAT
TTTCATGCTGAGGCTAGAACAGCACAATCTCGTGCGAAACTGTAAGGTTT
CCGGCCGCCTCACCCTCGTCGATCTGGCTGGTTCGGAAAGAGCCGGCAAG
GCGGGGTTGGAGGGACGGCATCTAGAAGAGGCGAGCAGCATCAACGTCAG
CCTGCACACCCTGGGCAGGGTCATCCGGAAATTGAGCGACAGCGCGCCGC
ACGTCCCCTTCCGCGACAGCAAGCTCACGCGCCTCTTGCAGGAGTCTCTG
GGGGGAAATAGCCGCACAATCTCGTGCGAAACTGTAAGGTTTCCGGCCGC
CTCACCCTCGTCGATCTGGCTGGTTCGGAAAGAGCCGGCAAGGCGGGGTT
GGAGGGACGGCATCTAGAAGAGGCGAGCAGCATCAACGTCAGCCTGCACA
CCCTGGGCAGGGTCATCCGGAAATTGAGCGACAGCGCGCCGCACGTCCCC
TTCCGCGACAGCAAGCTCACGCGCCTCTTGCAGGAGTCTCTGGGGGGAAA
TAGCCGTACGGCGCTCATCGTTTGCTGCAGCCCGGAAGAGGCGCACGCGC
GGGAGACTCTCTCCACTCTAACTTTCGGCGAGTGCGCCAAACGGGTGACC
ACGTTCGCATCCGCAAACGTGGTCGCCGCTCCGGACGAAGTTGCCGCCCA
GCTGTCGGAACTCCGGGAGGAAGTAGTCCGTCTCAAGCGGCAGTACGGCG
CTCATCGTTTGCTGCAGCCCGGAAGAGGCGCACGCGCGGGAGACTCTCTC
CACTCTAACTTTCGGCGAGTGCGCCAAACGGGTGACCACGTTCGCATCCG
CAAACGTGGTCGCCGCTCCGGACGAAGTTGCCGCCCAGCTGTCGGAACTC
CGGGAGGAAGTAGTCCGTCTCAAGCGGCAGCTACACGACCTTCGACTGCG
AGAGGTGAAGAAGGACGCCATTCTGCTGCAAGGCGGAAGGTAACTACACG
ACCTTCGACTGCGAGAGGTGAAGAAGGACGCCATTCTGCTGCAAGGCGGA
AGGTAA
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