mRNA_H-elongata_contig47999.11935.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: D7FPU9_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU9_ECTSI) HSP 1 Score: 226 bits (576), Expect = 6.280e-67 Identity = 144/199 (72.36%), Postives = 153/199 (76.88%), Query Frame = 1
Query: 178 ADDRKARNRERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSCSARSPTSGSKVPALA------GRDWGRELAAHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
A DRKARNRERNRLHARKTRQRKKQHVQELQLKI GLRQERQRLLQLST+HRTAGVLLALSCSP QC EG + S H S A + PA + GRDWG E+A+HE+ALRKITQEFE MDG Q AGDD A A GG SRG +KGTL+DRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM
Sbjct: 80 AADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQ--EGPAGSQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEA-ATHAGGKXXXGSRG-AKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 274
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A6H5L2A4_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A4_9PHAE) HSP 1 Score: 209 bits (532), Expect = 1.020e-63 Identity = 133/199 (66.83%), Postives = 145/199 (72.86%), Query Frame = 1
Query: 178 ADDRKARNRERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSCSARSPTSGSKVPALA------GRDWGRELAAHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
A DRKARNRERNRLHARKTRQRKKQHVQELQLKI GLRQERQRLLQLST+H TAGVLLALSCSP QC EG + + H S A + PA + RDWG+E+A+HE+ALRKITQEFE MDG Q AGD + +KGTL+DRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM
Sbjct: 81 AADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHHTAGVLLALSCSPQQCQ--EGPAGNQHQSSRSSPALKLPKAAATPAASRSSKGSSRDWGQEVASHEDALRKITQEFERMDGSQQAGDXXXXXXXXXXXXXXXSRA--AKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 275
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A7S2REX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REX0_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.490e-12 Identity = 75/192 (39.06%), Postives = 102/192 (53.12%), Query Frame = 1
Query: 154 SGKRKRMSADDRKARNRERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSCSARSPTSGSKVPALAGRDWGRELAAHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVE 729
S KR+R+S+++R R+RERNR+HA+KTRQRKK ++ LQ +I L+ E L Q+ E TA +LL +S + G GAS S G + S + + + + GRD E EEA +K T+ RG K T A+R +RRERNRMHAKRTR+RKKLF+E
Sbjct: 185 SKKRRRLSSEERLQRSRERNRMHAKKTRQRKKMQIEALQARIDELKTEFLGLRQIVDERYTAYILLVMSGAAEN---GSGASFLSSSAEGPSTLGSKFTSASLAQIIGRDPDAE-DDKEEAPQKRTRR-----------------------------RG--KYTPAEREHIRRERNRMHAKRTRDRKKLFLE 341
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A6U2ACZ3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2ACZ3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 6.790e-9 Identity = 73/197 (37.06%), Postives = 102/197 (51.78%), Query Frame = 1
Query: 202 RERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGS----CSARSPTSGSKVPALAGRDW-GRELAAHEEALRKITQEFES--MDGGQHAGDDGCASAAGG----GGVEGKA-SRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
RERNR+HARKTRQRKK+H+Q LQ + L+ E+ RL Q E TA +LL + G SA +P SA SK+P L G+ + +A ++ + +DGG G GG G++ + S+ SK T A+ +RRERNRMHAKRTR+RK++F+E VMI ++
Sbjct: 32 RERNRMHARKTRQRKKEHMQSLQNRADELKNEQLRLKQAINEKNTASILLGMFSRDGPA---SGGSAKDVNPKVEELLRRSAEEIPDASKIPELPALILPGQHNSKKNKAAAQMQPPAAAAPLDGGGLEGSPEMGPQHGGLMPDDGIDYELLSKDRSKCTPAELDRIRRERNRMHAKRTRDRKRIFMEEMEVMIKQL 225
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A7S2L7Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L7Q6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.030e-8 Identity = 77/208 (37.02%), Postives = 105/208 (50.48%), Query Frame = 1
Query: 202 RERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGA----SASSHDPGGSCSARSPTS----GSKVPALAGRDWGRELAAHEEALRKITQEFESMDGGQHAGDDGCASA--AGGGGV---EGKASRG----------GSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
RERNR+HARKTRQRKK+H+Q+LQ + L+ E+ RL Q E TA +L+ L + +G+ +A S DP + PT SK+P L + + RK + S DG A+A A G GV EG+ G GS T A+ +RRERNRMHAKRTR+RK++F+E MI ++
Sbjct: 18 RERNRMHARKTRQRKKEHMQQLQNRADELKLEQIRLKQCINEKNTANILVGLFQTGEDSAAADGSDDTETAVSMDPQVEVLLKRPTEEIPDASKIPELPAL-----ILPGQHTKRKSSS---SNDGASEDNTPTAAAAPAADGEGVTIPEGEQEDGIDYVLLGKDRGSC-TPAELDQIRRERNRMHAKRTRDRKRIFMEEMETMIKQL 216
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.310e-8 Identity = 73/206 (35.44%), Postives = 100/206 (48.54%), Query Frame = 1
Query: 202 RERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSC----SARSPTSGSKVPALA-----GRDWGR-----------ELA-AHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q E TA +LL + C E + DP SA SK+P L G+ G+ E+A A EA+ + DG + + GK SK T A+ +RRERNRMHAKRTR+RK++F+E VMI ++
Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCK-------EKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYE-------------LLGKDR---SKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQL 193
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: BZP14_PHATC (bZIP transcription factor 14 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=BZP14_PHATC) HSP 1 Score: 63.9 bits (154), Expect = 4.500e-8 Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 1
Query: 166 KRMSADDRKARNRERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLAL-----SCSPNQCILGEGASASSHDPGGSCSARSPTSGSKVPALA--GRDWGRELAAHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGG----------SKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVM 744
K+ DDR R+RERNR+HARKTRQRKK+ +Q L+ + L+ E+ RL Q+ E TA +L+ L S SPN+ E S + P+ ++PAL G+ +++ A+ + +SM G G + AS + G E + G SK T + +RRERNRMHAKRTR+RK++F E + M
Sbjct: 112 KKADTDDRVQRSRERNRIHARKTRQRKKEQMQSLEGRATDLKHEQIRLKQIINEKNTANILVGLFSKGQSQSPNEDPRVEALMYRSVE-----EIPDPSKIPELPALILPGQHASKKIKV---AVPVVAASPQSMSDG---GGEEVASTSDVSGDEQQVPDDGIDYDLLGKDRSKCTPEELDQIRRERNRMHAKRTRDRKRIFTEEMAEM 310
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A7S2V3V7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3V7_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 6.500e-8 Identity = 69/206 (33.50%), Postives = 108/206 (52.43%), Query Frame = 1
Query: 145 DSASGKRKRM---SADDRKARNRERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSCSARSPTSGSKVPALAGRDWGRELAAHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDK 753
D +S RKR S D+++ R+RERNR HARKTR+RKK + LQ ++ +R+ER+ L++L E TA +LL LS +C E SH G P + +L G++ + A LR++ E E+ + + + G ++G + K +L + LRRERNR HAK TR+RKK +++ M+++
Sbjct: 62 DLSSNSRKRRKCGSPDEKQNRSRERNREHARKTRERKKDQLLSLQSRLEDVRKEREHLIRLVEECNTAAILLGLSDVIRKCDTTE-----SHKDG------EP----EEQSLKGKNNIAKEACKNPELRQLELELEADKKMKQSSKCNGINWKDGYMIDGNGNT--KKLSLQELEVLRRERNRAHAKLTRDRKKAYIKMIEQMVER 250
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 6.800e-8 Identity = 73/206 (35.44%), Postives = 100/206 (48.54%), Query Frame = 1
Query: 202 RERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSC----SARSPTSGSKVPALA-----GRDWGR-----------ELA-AHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q E TA +LL + C E + DP SA SK+P L G+ G+ E+A A EA+ + DG + + GK SK T A+ +RRERNRMHAKRTR+RK++F+E VMI ++
Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCK-------EKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYE-------------LLGKDR---SKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQL 193
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.800e-8 Identity = 73/206 (35.44%), Postives = 100/206 (48.54%), Query Frame = 1
Query: 202 RERNRLHARKTRQRKKQHVQELQLKILGLRQERQRLLQLSTEHRTAGVLLALSCSPNQCILGEGASASSHDPGGSC----SARSPTSGSKVPALA-----GRDWGR-----------ELA-AHEEALRKITQEFESMDGGQHAGDDGCASAAGGGGVEGKASRGGSKGTLADRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 756
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q E TA +LL + C E + DP SA SK+P L G+ G+ E+A A EA+ + DG + + GK SK T A+ +RRERNRMHAKRTR+RK++F+E VMI ++
Sbjct: 183 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCK-------EKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYE-------------LLGKDR---SKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQL 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47999.11935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47999.11935.1 >prot_H-elongata_contig47999.11935.1 ID=prot_H-elongata_contig47999.11935.1|Name=mRNA_H-elongata_contig47999.11935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp MEVIEVAGKLLGLAVADLGTDSASEDEDASWTRQESNASYECGASEDEDSback to top mRNA from alignment at H-elongata_contig47999:3371..4168+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47999.11935.1 ID=mRNA_H-elongata_contig47999.11935.1|Name=mRNA_H-elongata_contig47999.11935.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=798bp|location=Sequence derived from alignment at H-elongata_contig47999:3371..4168+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47999:3371..4168+ >mRNA_H-elongata_contig47999.11935.1 ID=mRNA_H-elongata_contig47999.11935.1|Name=mRNA_H-elongata_contig47999.11935.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1512bp|location=Sequence derived from alignment at H-elongata_contig47999:3371..4168+ (Himanthalia elongata Himel1 dioecious)back to top |