mRNA_H-elongata_contig4785.11921.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig4785.11921.1
Unique Name	mRNA_H-elongata_contig4785.11921.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 5.080e-26
Identity = 123/417 (29.50%), Postives = 161/417 (38.61%), Query Frame = 2

Query:  473 GRGEPSDADADDSKWACQRCTYLNHSSMPRCEICDASVPEDERPPDERFADTLLD-----------YNDLGCYGSRGQRQRRRSTSDYSENSPYTLMHERVGVGVSTRGGASGGLPRVGGANIDAGRAASDAVRGSAIGAVGAGVLTSMNHNARRGQILASMLQGAVAGGVAGAALGRGLRPEAGSSGGRREDHGVEHD-------------------DAFRSEQDPDGFGRPTRGR-------AGLLGESLESVS---QRQAFRQQG----------LASGVDDDVALLLRHNRRVGDPERVFVRLNRNEWETPTRDGMPPARLLHMLSFLNRRQNPATERRRASPEAIAALPEETLSATSLSCLGDD-TQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            G GE  D     + WAC  CTYLN   + RC++C   +   +RPPD  + DTL+                                                           GL       +D     S A  GSAIGA+G  +L+++   AR   +++SM QGA+ GG+AGAALG GL  E G+                                 +F   + P    R  RGR       + +L   LE++S      A R++G          + +G+   +A    H+   GD                   G  PA                      S  AIAALP E L+A +L+ L DD  QCCICLEDF  G   TRLPCLH YHT CI +WL+TSGTCP CK RV
Sbjct:  106 GEGESGDT----TTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQGL-------LDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALG-GLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFEFVRGP--TARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIYAGILRQLAEAQNHDAAGGDAXXXX--------------GTSPA----------------------SARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRV 472

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A7S3LGX2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGX2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.940e-14
Identity = 102/365 (27.95%), Postives = 138/365 (37.81%), Query Frame = 2

Query:  515 WACQRCTYLNHSSMPRCEICDASVPEDERPPDERFADTLLDYNDLGCYGSRGQRQRRRSTSDYSENSPYTLMHERVGVGVSTRGGASGGLPRVGGANIDAGRAASDAVRGSAIGAVGAGVLTSMNHNARRGQILAS-MLQGAVAGGVAGAALGRGLRPEAGSSGGRREDHGVEHDDA--------FRSEQDPDGFGRPTRGRAGLLGESLESVSQRQAFRQQGLASGVDDDVALLLRHNRRVGDPERVFVRLNRNEWETPTR----DGMPPARLLHMLSFLNRRQNPATERRRASPEAIAALPEETLSATSLSCLGDDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            W C RCT  N +S   CE C    PE ERPPD+                                     +  ER+ +G    GG SGGL  + GA          A+ GS +G  GA +         RGQ L+S +L GA+ G V+G  L    R E    G   +        A            + PDG    TR   G    +        A     +A+  ++++  LL           +  +L RN+     +    D M   +LL M           TE   A    I +LP  T+         D  QC ICLEDF  G     +PCLH +H  C+  WLRT+G+CP+CKHR+
Sbjct:  192 WCCPRCTLQNSASSSSCEACSFRRPETERPPDQ-------------------------------------VRRERL-IGEPQPGG-SGGL--ISGA----------ALLGSVLGGTGAYL---------RGQPLSSGLLNGAMTGAVSGVVLNELARNETRQGGPLMQQQSQTFVSAGSWPAIQSISIVRTPDGRVVATRSGNGTSSTASYGGGGGVARANPPVANNPNNELNQLL--------SSLIAHQLIRNQGGAQQQRMNPDQMSYEQLLQMFGS-------GTENMAAGERQIRSLPSATIQDVD-KLPPDSRQCSICLEDFKTGDERKIMPCLHGFHADCVDKWLRTNGSCPICKHRL 480

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A1E7FA57_9STRA (RING-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA57_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.680e-12
Identity = 39/81 (48.15%), Postives = 46/81 (56.79%), Query Frame = 2

Query: 1340 TERRRASPEAIAALPEETLSATSL---SCLGDDT-QCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            TE   A    I  LP   L    L   S L +D  QC ICLEDF  G   + LPCLH +HT C   WLRT+G+CP+CKHR+
Sbjct:   14 TENLGADEGDIRQLPTHILKDDPLKGPSALPEDARQCLICLEDFAKGERRSILPCLHGFHTNCSTKWLRTNGSCPICKHRI 94

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A6G1C942_9ORYZ (RING-type domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1C942_9ORYZ)

HSP 1 Score: 71.6 bits (174), Expect = 1.600e-11
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 2

Query: 1355 ASPEAIAALPEETLSATSLSCLGDDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            A+ EAIA L E  L   ++     + +C +C+EDF  G  +  +PC H +H  CI DWLR SG CP+C+HR+
Sbjct:   22 ATSEAIAGLREARLDDEAMI---REEECAVCMEDFEAGDKLRAMPCSHCFHERCIFDWLRVSGICPLCRHRL 90

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A7S0GK16_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GK16_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.350e-10
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 2

Query: 1424 DDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKH 1564
            +D +C ICL+D+C G  V  LPC H +H+ C+  WLR++G+CP+CKH
Sbjct:   90 EDDRCTICLDDYCPGERVKTLPCRHNFHSECLEKWLRSNGSCPICKH 136

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A7J0H3T5_9ERIC (RING-type domain-containing protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0H3T5_9ERIC)

HSP 1 Score: 69.3 bits (168), Expect = 3.260e-10
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 2

Query: 1418 LGDDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            L     C ICL++FC+G  VTR+PC H YH  CI +WL+TS  CP+C+ R+
Sbjct:   86 LDGSDHCTICLDEFCVGSEVTRMPCSHVYHQDCIVEWLKTSNLCPLCRFRM 136

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A7S1W7T4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1W7T4_ALECA)

HSP 1 Score: 70.9 bits (172), Expect = 3.520e-10
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 2

Query: 1337 ATERRRASPEA-IAALPEETLSATSLSCLGDDT-QCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKH 1564
            A E+  AS  A + ALP  TL++  L+   +D  +C IC+ +F  G     LPC H +H AC+  WLR  G+CP+CKH
Sbjct:  109 AEEQNSASFSAMVRALPVRTLTSADLANADEDQRECAICIREFTRGDKQRTLPCFHHFHPACVDQWLRRKGSCPICKH 186

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A448ZCN4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCN4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.530e-10
Identity = 36/77 (46.75%), Postives = 44/77 (57.14%), Query Frame = 2

Query: 1340 TERRRASPEAIAALPEETLSATSLSCLGDDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            TE   A    I  LP   +    L    D  QC ICLEDF  G + T LPCLH +H  C H WL+T+G+CPVCK+R+
Sbjct:  601 TENLGAQESEIRRLPVHVVGDVPLP--EDARQCLICLEDFEKGEMRTILPCLHGFHQNCCHKWLKTNGSCPVCKYRI 675

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A0D9XP18_9ORYZ (RING-type domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XP18_9ORYZ)

HSP 1 Score: 68.2 bits (165), Expect = 7.840e-10
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 2

Query: 1355 ASPEAIAALPEETLSATSLSCLGDDTQCCICLEDFCLG----HVVTRLPCLHPYHTACIHDWLRTSGTCPVCKHRV 1570
            A+ EAIA L      A S+     + +C +C+EDF  G      + ++PC H +H  CI DWLR SG CP+C+HR+
Sbjct:   61 AASEAIAGL-----MAASVDEASRERECAVCMEDFVAGGGGEQQLRKMPCSHCFHEGCIFDWLRVSGVCPLCRHRL 131

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BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Match: A0A194PUU1_PAPXU (RING-type E3 ubiquitin transferase n=4 Tax=Papilio TaxID=7145 RepID=A0A194PUU1_PAPXU)

HSP 1 Score: 71.2 bits (173), Expect = 2.680e-9
Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 2

Query: 1364 EAIAALPEETLSATSLSCLGDDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWLRTSGTCPVCK 1561
            + +AALP ET++A   +   ++T C IC E+F  G  V+RL CLH YH+ CI  WL+   TCP+C+
Sbjct:  172 DQLAALPTETITAEQAA---ENTTCSICWENFLEGESVSRLECLHMYHSTCIRPWLQLHATCPICR 234

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot

BLAST of mRNA_H-elongata_contig4785.11921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LR18_ECTSI	5.080e-26	29.50	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A7S3LGX2_9STRA	5.940e-14	27.95	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A1E7FA57_9STRA	2.680e-12	48.15	RING-type domain-containing protein n=1 Tax=Fragil...	[more]
A0A6G1C942_9ORYZ	1.600e-11	43.06	RING-type domain-containing protein n=1 Tax=Oryza ...	[more]
A0A7S0GK16_9STRA	1.350e-10	51.06	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A7J0H3T5_9ERIC	3.260e-10	50.98	RING-type domain-containing protein n=1 Tax=Actini...	[more]
A0A7S1W7T4_ALECA	3.520e-10	42.31	Hypothetical protein n=1 Tax=Alexandrium catenella...	[more]
A0A448ZCN4_9STRA	5.530e-10	46.75	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A0D9XP18_9ORYZ	7.840e-10	40.79	RING-type domain-containing protein n=1 Tax=Leersi...	[more]
A0A194PUU1_PAPXU	2.680e-9	45.45	RING-type E3 ubiquitin transferase n=4 Tax=Papilio...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig4785	contig	H-elongata_contig4785:2975..5771 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	128.6
Seed ortholog evalue	8.1e-27
Seed eggNOG ortholog	2880.D8LR18
EggNOG free text desc.	ubiquitin-protein transferase activity
EggNOG OGs	KOG0800@1,KOG0800@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Zinc finger, RING/FYVE/PHD-type
Ec32 ortholog	Ec-06_004730.1
Exons	1
Model size	2797
Cds size	1542
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig4785.11921.1	prot_H-elongata_contig4785.11921.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig4785 3006..4547 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930789.6990788-UTR-H-elongata_contig4785:2974..3005	1622930789.6990788-UTR-H-elongata_contig4785:2974..3005	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig4785 2975..3005 +
1691679571.160224-UTR-H-elongata_contig4785:2974..3005	1691679571.160224-UTR-H-elongata_contig4785:2974..3005	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig4785 2975..3005 +
1622930789.7273188-UTR-H-elongata_contig4785:4547..5771	1622930789.7273188-UTR-H-elongata_contig4785:4547..5771	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig4785 4548..5771 +
1691679571.1813798-UTR-H-elongata_contig4785:4547..5771	1691679571.1813798-UTR-H-elongata_contig4785:4547..5771	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig4785 4548..5771 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930789.7132585-CDS-H-elongata_contig4785:3005..4547	1622930789.7132585-CDS-H-elongata_contig4785:3005..4547	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig4785 3006..4547 +
1691679571.1732378-CDS-H-elongata_contig4785:3005..4547	1691679571.1732378-CDS-H-elongata_contig4785:3005..4547	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig4785 3006..4547 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig4785:2975..5771+
coding sequence from alignment at H-elongata_contig4785:2975..5771+

protein sequence of mRNA_H-elongata_contig4785.11921.1

>prot_H-elongata_contig4785.11921.1 ID=prot_H-elongata_contig4785.11921.1|Name=mRNA_H-elongata_contig4785.11921.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=514bp
MHCARSGCSSPEPLNVFASDEPVSTETGSWRECDIQRIRAAAAVEDRTRR
EQERRRILFPRPSQPQEPPESSMSDGDDPTWERFLAEAIARSLRDDDARG
EPRWSSAIGAATEPGESRLVPAGIDEHGAAVGMTEERTRQSRGDGRGGRG
EPSDADADDSKWACQRCTYLNHSSMPRCEICDASVPEDERPPDERFADTL
LDYNDLGCYGSRGQRQRRRSTSDYSENSPYTLMHERVGVGVSTRGGASGG
LPRVGGANIDAGRAASDAVRGSAIGAVGAGVLTSMNHNARRGQILASMLQ
GAVAGGVAGAALGRGLRPEAGSSGGRREDHGVEHDDAFRSEQDPDGFGRP
TRGRAGLLGESLESVSQRQAFRQQGLASGVDDDVALLLRHNRRVGDPERV
FVRLNRNEWETPTRDGMPPARLLHMLSFLNRRQNPATERRRASPEAIAAL
PEETLSATSLSCLGDDTQCCICLEDFCLGHVVTRLPCLHPYHTACIHDWL
RTSGTCPVCKHRV*

mRNA from alignment at H-elongata_contig4785:2975..5771+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig4785.11921.1 ID=mRNA_H-elongata_contig4785.11921.1|Name=mRNA_H-elongata_contig4785.11921.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2797bp|location=Sequence derived from alignment at H-elongata_contig4785:2975..5771+ (Himanthalia elongata Himel1 dioecious)
GGTCCCGATTGGCAACCGCCAAGTTCACGAGATGCACTGCGCTCGTAGCG
GTTGCTCTAGCCCCGAACCGCTTAATGTATTTGCGTCCGACGAGCCGGTG
TCGACAGAGACGGGGAGCTGGCGAGAATGTGATATCCAAAGGATCCGGGC
GGCCGCGGCAGTAGAGGACAGGACTCGAAGGGAGCAGGAGCGACGGCGCA
TTTTGTTTCCGAGGCCTTCGCAGCCTCAGGAGCCGCCGGAATCATCAATG
TCGGACGGGGACGACCCTACCTGGGAGCGCTTTCTTGCCGAGGCAATCGC
GAGATCGCTCAGAGATGATGATGCTCGAGGGGAACCTCGATGGTCCTCGG
CGATTGGTGCGGCAACCGAACCCGGCGAAAGCCGCCTTGTGCCCGCCGGG
ATTGACGAACACGGAGCAGCGGTTGGTATGACGGAAGAAAGGACAAGGCA
AAGCCGCGGTGATGGCAGGGGTGGTCGAGGTGAACCGAGCGATGCTGACG
CCGACGATTCGAAGTGGGCGTGCCAGCGTTGCACTTACTTGAACCACAGC
AGCATGCCGCGTTGCGAGATCTGCGATGCATCTGTGCCCGAAGACGAGAG
GCCACCGGACGAGAGGTTCGCCGATACGCTTTTAGATTATAACGACTTGG
GGTGCTATGGTTCTCGGGGGCAGCGGCAGCGGCGGCGTTCAACATCGGAT
TATAGCGAGAATTCGCCGTACACCCTTATGCACGAACGCGTCGGCGTCGG
CGTCAGCACCCGCGGTGGGGCCAGTGGCGGCCTTCCCCGCGTCGGCGGAG
CTAACATTGACGCTGGAAGAGCGGCGTCAGACGCAGTGAGAGGATCGGCG
ATCGGCGCCGTGGGCGCGGGAGTCTTAACGTCGATGAACCATAACGCTCG
GAGGGGACAGATTCTCGCGTCGATGTTGCAAGGTGCTGTCGCTGGTGGGG
TGGCCGGAGCCGCGCTTGGACGTGGGCTCAGACCCGAAGCTGGAAGTTCT
GGTGGCCGCCGGGAAGACCACGGTGTGGAGCACGACGATGCTTTCCGTTC
GGAGCAAGATCCAGATGGCTTCGGCCGCCCGACGCGGGGCCGGGCGGGGT
TGTTAGGCGAAAGTCTGGAAAGCGTGAGTCAACGCCAGGCCTTCCGTCAA
CAGGGGCTTGCCAGCGGCGTCGACGATGACGTTGCTTTGCTATTGAGACA
CAATCGGAGGGTTGGCGACCCCGAACGGGTTTTTGTCAGGCTAAACCGGA
ATGAGTGGGAAACACCGACGCGGGACGGCATGCCCCCCGCGCGTTTGCTT
CATATGTTAAGCTTCCTCAATCGGAGGCAAAATCCTGCAACAGAAAGAAG
GCGAGCGTCGCCGGAGGCGATCGCCGCTCTTCCTGAGGAGACGCTGTCGG
CGACGTCGCTATCGTGCCTCGGGGACGATACACAGTGTTGTATCTGCCTC
GAAGACTTCTGCCTGGGGCACGTGGTCACGCGCCTCCCCTGCCTCCATCC
TTACCACACCGCCTGCATCCACGACTGGCTGCGTACCTCGGGCACCTGTC
CCGTGTGCAAGCACAGGGTGTGACTGAGAACACGTTTTATACCGCGAGAG
ATAAGCGTGTATCCTCTACTTCTCGAACTGGGGACGCTCTCTCTCTCGGC
TTCTTGCCTCCTGCCGGGCTCGACGGGTGCCTGTTCAGTAGACCGTCACC
AGCGGGATTGGCCACCGCCGCGTACAGCCAGCCTCAGCGGCCAGCTTGGG
TTTCAACAGGCACATGAAATGATCGGTACCCGGGAAATCAGAGATCAGGA
GTTAATATTTTTTTGTACGTGGTTCTGCTGCCGGGCGCCCTAGTGATGAT
GGTTTGCTCGGAGCATTTGTTGTTGTTCGCTCCTGGCTATTGAAGCTATT
TTTGGGAACGCGGATAAAACCGCCAGCGCAGAGCATCCCTTTTTGTTCTC
AAGACGAGTATGTTGCTGACACCATCAGTGACGGGGTTTTCTTCCTCAAG
ATGACCACAGACGAGCTCATCAGAGTTCTCAAGGAGCGAGACGGACCGTA
GAGGTCGTGTAAGCGGGAGTCAATGATGAAAATCCCCGGGTTTTCTTAAC
CAGCGCGCTTTTTCGTGGAGAGAGCAAGAAATATATACTATAATAAAATA
ATATGGCATTCAAGGGATGTATATATTATTGTTGAATCGTACCGGTGTTA
GATGTGAACGCCGATGTGGCATCCTAATCGAGGTTTTATTTTTGGATGAC
TGTGTAGGGTCTCTCTTAGGTAATCCTCCCTTGGGCATCATAATTGATAT
AGACATATTTTCCGAATGCCACTCGCCATGTTGACTCGGAATTTCTCATG
GGTGCCGCCGAATTCGGGGTCGCCAAAACCTGAAATTTACAACATCTGTT
TGACCGTTGCTATGGGCCAAAGCGGCCCGAACTTGTTTCCATAGGTCTAG
GGGTGTGTGTGTGTGTGGGGGGGGGGTTACCTTTATTAGGGGATGATGCC
TATTTCTACGCAGCATTGACTAATCTACTGATGTCATAGATCATAAAGGG
ATTCCAGAAGTATTCTCCGAGGCGGTTATACTAAATTTATGGTAAATCTT
GTAGATATTTAGTTTGCGATGCCCTACTTCTACCCCTTTTTTCTTTTCTT
TACTACTGTATATAGATCCTTCTCATACGTGACGGCTATTGGTATGCCTC
CGAAATAAATGTTCTCGAGCGAAGTTGGCGGTTGGAGGACGGGAGGGGTG
GGCATCGAACAAGAACTCTTCCCCCCGCTGTTAATTCATGTCAGCTC

Coding sequence (CDS) from alignment at H-elongata_contig4785:2975..5771+

>mRNA_H-elongata_contig4785.11921.1 ID=mRNA_H-elongata_contig4785.11921.1|Name=mRNA_H-elongata_contig4785.11921.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3084bp|location=Sequence derived from alignment at H-elongata_contig4785:2975..5771+ (Himanthalia elongata Himel1 dioecious)
ATGCACTGCGCTCGTAGCGGTTGCTCTAGCCCCGAACCGCTTAATGTATT
TGCGTCCGACGAGCCGGTGTCGACAGAGACGGGGAGCTGGCGAGAATGTG
ATATCCAAAGGATCCGGGCGGCCGCGGCAGTAGAGGACAGGACTCGAAGG
GAGCAGGAGCGACGGCGCATTTTGTTTCCGAGGCCTTCGCAGCCTCAGGA
GCCGCCGGAATCATCAATGTCGGACGGGGACGACCCTACCTGGGAGCGCT
TTCTTGCCGAGGCAATCGCGAGATCGCTCAGAGATGATGATGCTCGAGGG
GAACCTCGATGGTCCTCGGCGATTGGTGCGGCAACCGAACCCGGCGAAAG
CCGCCTTGTGCCCGCCGGGATTGACGAACACGGAGCAGCGGTTGGTATGA
CGGAAGAAAGGACAAGGCAAAGCCGCGGTGATGGCAGGGGTGGTCGAGGT
GAACCGAGCGATGCTGACGCCGACGATTCGAAGTGGGCGTGCCAGCGTTG
CACTTACTTGAACCACAGCAGCATGCCGCGTTGCGAGATCTGCGATGCAT
CTGTGCCCGAAGACGAGAGGCCACCGGACGAGAGGTTCGCCGATACGCTT
TTAGATTATAACGACTTGGGGTGCTATGGTTCTCGGGGGCAGCGGCAGCG
GCGGCGTTCAACATCGGATTATAGCGAGAATTCGCCGTACACCCTTATGC
ACGAACGCGTCGGCGTCGGCGTCAGCACCCGCGGTGGGGCCAGTGGCGGC
CTTCCCCGCGTCGGCGGAGCTAACATTGACGCTGGAAGAGCGGCGTCAGA
CGCAGTGAGAGGATCGGCGATCGGCGCCGTGGGCGCGGGAGTCTTAACGT
CGATGAACCATAACGCTCGGAGGGGACAGATTCTCGCGTCGATGTTGCAA
GGTGCTGTCGCTGGTGGGGTGGCCGGAGCCGCGCTTGGACGTGGGCTCAG
ACCCGAAGCTGGAAGTTCTGGTGGCCGCCGGGAAGACCACGGTGTGGAGC
ACGACGATGCTTTCCGTTCGGAGCAAGATCCAGATGGCTTCGGCCGCCCG
ACGCGGGGCCGGGCGGGGTTGTTAGGCGAAAGTCTGGAAAGCGTGAGTCA
ACGCCAGGCCTTCCGTCAACAGGGGCTTGCCAGCGGCGTCGACGATGACG
TTGCTTTGCTATTGAGACACAATCGGAGGGTTGGCGACCCCGAACGGGTT
TTTGTCAGGCTAAACCGGAATGAGTGGGAAACACCGACGCGGGACGGCAT
GCCCCCCGCGCGTTTGCTTCATATGTTAAGCTTCCTCAATCGGAGGCAAA
ATCCTGCAACAGAAAGAAGGCGAGCGTCGCCGGAGGCGATCGCCGCTCTT
CCTGAGGAGACGCTGTCGGCGACGTCGCTATCGTGCCTCGGGGACGATAC
ACAGTGTTGTATCTGCCTCGAAGACTTCTGCCTGGGGCACGTGGTCACGC
GCCTCCCCTGCCTCCATCCTTACCACACCGCCTGCATCCACGACTGGCTG
CGTACCTCGGGCACCTGTCCCGTGTGCAAGCACAGGGTGTGAATGCACTG
CGCTCGTAGCGGTTGCTCTAGCCCCGAACCGCTTAATGTATTTGCGTCCG
ACGAGCCGGTGTCGACAGAGACGGGGAGCTGGCGAGAATGTGATATCCAA
AGGATCCGGGCGGCCGCGGCAGTAGAGGACAGGACTCGAAGGGAGCAGGA
GCGACGGCGCATTTTGTTTCCGAGGCCTTCGCAGCCTCAGGAGCCGCCGG
AATCATCAATGTCGGACGGGGACGACCCTACCTGGGAGCGCTTTCTTGCC
GAGGCAATCGCGAGATCGCTCAGAGATGATGATGCTCGAGGGGAACCTCG
ATGGTCCTCGGCGATTGGTGCGGCAACCGAACCCGGCGAAAGCCGCCTTG
TGCCCGCCGGGATTGACGAACACGGAGCAGCGGTTGGTATGACGGAAGAA
AGGACAAGGCAAAGCCGCGGTGATGGCAGGGGTGGTCGAGGTGAACCGAG
CGATGCTGACGCCGACGATTCGAAGTGGGCGTGCCAGCGTTGCACTTACT
TGAACCACAGCAGCATGCCGCGTTGCGAGATCTGCGATGCATCTGTGCCC
GAAGACGAGAGGCCACCGGACGAGAGGTTCGCCGATACGCTTTTAGATTA
TAACGACTTGGGGTGCTATGGTTCTCGGGGGCAGCGGCAGCGGCGGCGTT
CAACATCGGATTATAGCGAGAATTCGCCGTACACCCTTATGCACGAACGC
GTCGGCGTCGGCGTCAGCACCCGCGGTGGGGCCAGTGGCGGCCTTCCCCG
CGTCGGCGGAGCTAACATTGACGCTGGAAGAGCGGCGTCAGACGCAGTGA
GAGGATCGGCGATCGGCGCCGTGGGCGCGGGAGTCTTAACGTCGATGAAC
CATAACGCTCGGAGGGGACAGATTCTCGCGTCGATGTTGCAAGGTGCTGT
CGCTGGTGGGGTGGCCGGAGCCGCGCTTGGACGTGGGCTCAGACCCGAAG
CTGGAAGTTCTGGTGGCCGCCGGGAAGACCACGGTGTGGAGCACGACGAT
GCTTTCCGTTCGGAGCAAGATCCAGATGGCTTCGGCCGCCCGACGCGGGG
CCGGGCGGGGTTGTTAGGCGAAAGTCTGGAAAGCGTGAGTCAACGCCAGG
CCTTCCGTCAACAGGGGCTTGCCAGCGGCGTCGACGATGACGTTGCTTTG
CTATTGAGACACAATCGGAGGGTTGGCGACCCCGAACGGGTTTTTGTCAG
GCTAAACCGGAATGAGTGGGAAACACCGACGCGGGACGGCATGCCCCCCG
CGCGTTTGCTTCATATGTTAAGCTTCCTCAATCGGAGGCAAAATCCTGCA
ACAGAAAGAAGGCGAGCGTCGCCGGAGGCGATCGCCGCTCTTCCTGAGGA
GACGCTGTCGGCGACGTCGCTATCGTGCCTCGGGGACGATACACAGTGTT
GTATCTGCCTCGAAGACTTCTGCCTGGGGCACGTGGTCACGCGCCTCCCC
TGCCTCCATCCTTACCACACCGCCTGCATCCACGACTGGCTGCGTACCTC
GGGCACCTGTCCCGTGTGCAAGCACAGGGTGTGA