mRNA_H-elongata_contig4782.11917.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig4782.11917.1
Unique NamemRNA_H-elongata_contig4782.11917.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI)

HSP 1 Score: 699 bits (1803), Expect = 1.410e-244
Identity = 378/511 (73.97%), Postives = 416/511 (81.41%), Query Frame = 3 
Query:   30 GSSSLSKSDGRIAERLSSLTITSGLAAVHVMPKSVEFYDKACQADLGGASGAHGVGIAG---GVETEAGTQSSSAKKTPDKRRNHLRVFGRGGKGVPVHEGSEGEELGHSSGGGPSLVAASSPLRSGAGGPRPMVSTPVSKLGRLP-DGVG-LFSVPMTPPQQQQPSTVVEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQHRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSHEGVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANPSSSKSLRGLVLSSSVDWTTRLWRLGKTNNP-VQTLTHGTYDYVCDAKW 1544
            G SS + SD R A+RLSSLTI  GL +V V PKS EFYDK CQADLGGA+G    G AG   GV+      SSSAK+TPDKRRNH RVFGRGGKGVPV +GSEGE+LG+   G PSLVAASSP R G    +P+ STP S+ GR   DG G + ++PMTPP     +T  + +S D+K++I+QTDHFQDFLRRSSRVLERALGEKEALDVLLDYA DEGDS  RGDQGQRLNEAMTLHEDRWCQER+LTDLQWSPH PELVLASY+ARGHG++A SSS+L    +TDADGLVLVWS+AMQHRPEYQLSSQSPVLTARFHP+D HVIIGGTYSGQVV WDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTAST+GRV T                  G PV IS+MAVA+GDEQK +VVGSESGGIYTTPLHFRNSG VE+Y GHYGLVTSVDANPS+SK LRGLVLSSSVDWTTRLWRLG+ +N  VQTLTHGTYDYVCDAKW
Sbjct:  105 GGSSWAGSDRRAADRLSSLTIVCGLGSVDVAPKSTEFYDKGCQADLGGAAGTGAQGTAGADEGVDAVGAQSSSSAKRTPDKRRNHRRVFGRGGKGVPVPDGSEGEDLGYPPSGAPSLVAASSPSRPGVR--QPVASTPGSRSGRWTGDGTGGMTALPMTPP-----ATAAKPLSVDEKKEIVQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSG-RGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSAL----HTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGRVSTXXXXXXXXXXXXXXXXXXGKPVTISSMAVAQGDEQKNIVVGSESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKPLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKW 603
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA)

HSP 1 Score: 310 bits (795), Expect = 6.980e-96
Identity = 161/337 (47.77%), Postives = 226/337 (67.06%), Query Frame = 3 
Query:  564 TDHFQDFLRRSSRVLERALGEKEALDVLLDYAADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLL---TTTNTDADGLVLVWSLAMQHRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLS-------HEGVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANPSSSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            TD F  FL+R   V+ERAL E+   D+L DY+  +G +S R     +L++ +  ++  WC +RA+TD+ WSPH PEL+L +YSA G G    S+  LL      +   DGLVLVWSLA+  RPE+ L SQSP+LTARFH +D H+++GG+YSGQVV WD RA SLPVQ+TP+S   HT P++ + + GT  A +L+TASTDGRV  WNP QL QP +V++L+         G  + +S +A   G E  QL+VG +SG I    +H  ++G   ++ GH+G+VT++D NPS +K+L+ LVLSSS+DWTTRLW L +++ P+ T +H +YDYVCD +W
Sbjct:   54 TDSFSKFLKRCGTVVERALTEQATFDILKDYS--KGATSERTHGSDQLHKLLRFYDPTWCGDRAITDVHWSPHYPELLLVAYSASGRGQNLESA--LLGAPAAGDAHPDGLVLVWSLALPSRPEFILYSQSPILTARFHEFDAHLVVGGSYSGQVVTWDLRATSLPVQQTPVSDAAHTRPIFGMAMEGTGAAHALVTASTDGRVAWWNPRQLLQPNEVLQLALAQSDNDASGGGLSVSCIACVPG-ETVQLLVGMDSGRILAVAVHTHSAGVQREFHGHFGMVTALDTNPSKAKALQELVLSSSMDWTTRLWSLRQSDKPLVTFSHDSYDYVCDVRW 385
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: F4PS77_CAVFA (Cytoplasmic dynein intermediate chain n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PS77_CAVFA)

HSP 1 Score: 262 bits (670), Expect = 1.040e-75
Identity = 147/352 (41.76%), Postives = 211/352 (59.94%), Query Frame = 3 
Query:  522 VEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYA-ADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLA-MQHRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSHEG--------VPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANPS-SSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            V ++   +K++IL+++ F+ F  RSS+V+ERAL   + +D+L+DY   D+ D S      + L    TL ++RW + R++TD+ WSP  PELV+ SYSA   G             + D DG+VLVWS+     +PEY  + QSPV+T  F  + P +I+GGTYSGQ+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA +L++ STDG++C+WN   L+QP++ + L+ +            +  T  V +  E     VGSE G IY    H   +G  ++Y GH+G +TS+D +PS  S     L LSSS DWTTRLW   KT  PV +      DYV DA+W
Sbjct:  195 VIELDEQEKKEILESESFRTFFTRSSKVIERALMLDDNIDILVDYTKTDDEDKS----SSKELKLMGTLVDERWSKHRSVTDINWSPKHPELVVTSYSANETG-------------SHDPDGVVLVWSVNNFYQKPEYVFNCQSPVMTTFFSRFHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNANTLISVSTDGKLCSWNLDNLSQPVETLDLNAKNNTSSTVSATSSIAVTSLVFQETEMNAFFVGSEDGSIYQAHRHGSKTGISDRYKGHHGPITSIDFHPSRGSIDFGNLFLSSSTDWTTRLWSTNKTEAPVYSF-EDYVDYVYDARW 528
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: D3AZM5_POLPP (Cytoplasmic dynein intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZM5_POLPP)

HSP 1 Score: 258 bits (660), Expect = 3.550e-74
Identity = 143/343 (41.69%), Postives = 203/343 (59.18%), Query Frame = 3 
Query:  546 KRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQ-HRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSHEGVPVMISTMA-------VAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANPSS--SKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            K  IL++D F+ F  R+S+V+ERAL   +++D+L+DY   + +S       + L    TL ++RW + R++TD+ WSP  PELV+ SYSA   G             + D DG+VLVW++     +PEY  + QSPV+T  F  Y P +I+GGTYSGQ+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ STDG++C+W+   L+QP++ + L+       +ST         V    E     VG+E G IY    H   +G  E++  HYG VTS+D +P S  S     L LSSS DWT RLW   K + P+ +    T DYV DA+W
Sbjct:  207 KSNILESDSFKSFFSRTSKVIERALCLDDSIDILVDYTKSDEESKS---SSKELTLIGTLQDERWSKHRSVTDINWSPKHPELVVTSYSANEAG-------------SHDPDGVVLVWTVNNYFQKPEYVFNCQSPVMTTFFSRYHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDGKLCSWSLDNLSQPIETLDLNSRANTATVSTTTSIAVTSLVFPETEMNTFYVGTEEGVIYQAQAHGAKAGVNERFKAHYGPVTSIDFHPPSRNSSEFSNLFLSSSTDWTCRLWSSSKPDQPIYSFEDYT-DYVFDARW 532
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: UPI0006449257 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449257)

HSP 1 Score: 258 bits (659), Expect = 4.260e-74
Identity = 141/349 (40.40%), Postives = 208/349 (59.60%), Query Frame = 3 
Query:  522 VEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQ-HRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSHEGVPVMISTMAVA------EGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANPS-SSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            +E++S   K  IL++D F+ F  RSS+V+ERAL   +++D+L+DY   +    +     + L    TL ++RW + R++TD+ WSP  PELV+ SYS+   G             + D DG+VLVWS+     +PEY  + QSPV+T  F  +   +I+GGTYSGQ+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ STDG++C+W+   L+QP++ + L+      + +T ++A         E     VG+E G IY    H   +G  E++ GHYG +TSVD +PS  S     L LSSS DWT +LW   KT  P+ +      +YV DA+W
Sbjct:  198 IEELSEHDKNNILESDSFRSFFSRSSKVIERALYLDDSIDILVDYTKSD---EVTKSSTKELTLVGTLADERWTKHRSVTDINWSPKHPELVVTSYSSNEAG-------------SHDPDGVVLVWSVNNYFQKPEYTFNCQSPVMTTFFSRFHHTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSIGHTHPVYSMSVVGSANANSLVSISTDGKLCSWSLENLSQPIETLDLNSRNNTNISTTASIAVTSLVFPESEMNSFYVGTEEGVIYQAQRHGAKAGVNERFKGHYGPITSVDFHPSRGSTDFSNLFLSSSTDWTCKLWSTNKTETPIYSF-EDYVEYVYDARW 529
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: UPI000B8E9CE9 (cytoplasmic dynein 1 intermediate chain-like isoform X1 n=9 Tax=Zootermopsis nevadensis TaxID=136037 RepID=UPI000B8E9CE9)

HSP 1 Score: 247 bits (630), Expect = 1.190e-70
Identity = 143/355 (40.28%), Postives = 206/355 (58.03%), Query Frame = 3 
Query:  495 PQQQQPSTVVEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAA-DEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSH-EGVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANP-SSSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            PQ+Q+P+  V ++S ++K+ I+ T+ FQ FL R+ RV+ERAL E  ++D+  DY    +GD +     G RL+     ++DRW + R +T L WSP  PEL++ASY    +  ++P+          D DG+ L+W+   +   PEY    QSPVL A F  + P++I+GGTYSGQ+V WD R  K  PVQRTPLS   HT+PVY L + GT NA +L++ STDGR+C+W+   L+QP + + L H +G P+ ++ +A    D     +VGSE G +YT   H    G  E Y+GH G VT + A+          L L+SS DWT +LW + K N P+ +      DYV D  W
Sbjct:   99 PQKQEPAKQVRELSEEEKQMIILTEDFQRFLDRAGRVMERALSE--SVDIYTDYTGVGDGDEAADEKSGLRLSLNRCFYDDRWSRNRCVTSLDWSPQYPELLVASYH---NNEDSPN----------DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLILGGTYSGQIVLWDNRVQKRTPVQRTPLSTAAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHSDVNN-FIVGSEEGSVYTACRHGSKVGVTETYEGHQGPVTGISAHSVQGGIDFSHLFLTSSFDWTVKLWSV-KENRPLYSFEDNG-DYVYDVAW 435
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: A0A2J7R9K8_9NEOP (Cytoplasmic dynein 1 intermediate chain n=4 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7R9K8_9NEOP)

HSP 1 Score: 244 bits (624), Expect = 3.930e-70
Identity = 149/384 (38.80%), Postives = 220/384 (57.29%), Query Frame = 3 
Query:  438 SKL--GRLPDGV--------GLFSVPMTPPQQQQPSTVVEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAA-DEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSH-EGVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANP-SSSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            SKL  G LP G+         L S+   PP+Q+ P+  V ++S ++K+  + T+ FQ FL R+ R++ERA+ E  ++D+  DY    +GD +     G RL+     ++DRW + R LT L WSP  PEL++ASY    +  ++P+          D DG+ L+W+   +   PEY    QSPVL A F  + P++++GGTYSGQ+V WD R  K  P+QRTPLS + HT+PVY L + GT NA +L++ STDGR+C+W+   L+QP + + L H +G P+ ++ +A   GD     +VGSE G +YT   H   +G  E Y+GH G VT + A+    +     L L+SS DWT +LW + K N P+ +      DYV D  W
Sbjct:   37 SKLPPGILPHGLPQVKEVQPALTSLENAPPKQE-PAKQVRELSEEEKQMTILTEEFQRFLDRAGRLMERAVSE--SVDIYTDYTGVADGDEAGDEKSGLRLSLNRCFYDDRWSRNRCLTSLDWSPQYPELLVASYH---NNEDSPN----------DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLVLGGTYSGQIVLWDNRVQKRTPIQRTPLSTSAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHGDVNN-FIVGSEEGSVYTACRHGSKAGVTETYEGHQGPVTGISAHSVQGAIDFSHLFLTSSFDWTVKLWSV-KENRPLYSFEDNG-DYVYDVAW 401
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: A0A2J7R9J9_9NEOP (Cytoplasmic dynein 1 intermediate chain n=15 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7R9J9_9NEOP)

HSP 1 Score: 244 bits (624), Expect = 1.400e-68
Identity = 149/384 (38.80%), Postives = 220/384 (57.29%), Query Frame = 3 
Query:  438 SKL--GRLPDGV--------GLFSVPMTPPQQQQPSTVVEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAA-DEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQHR-PEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSH-EGVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANP-SSSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            SKL  G LP G+         L S+   PP+Q+ P+  V ++S ++K+  + T+ FQ FL R+ R++ERA+ E  ++D+  DY    +GD +     G RL+     ++DRW + R LT L WSP  PEL++ASY    +  ++P+          D DG+ L+W+   +   PEY    QSPVL A F  + P++++GGTYSGQ+V WD R  K  P+QRTPLS + HT+PVY L + GT NA +L++ STDGR+C+W+   L+QP + + L H +G P+ ++ +A   GD     +VGSE G +YT   H   +G  E Y+GH G VT + A+    +     L L+SS DWT +LW + K N P+ +      DYV D  W
Sbjct:  203 SKLPPGILPHGLPQVKEVQPALTSLENAPPKQE-PAKQVRELSEEEKQMTILTEEFQRFLDRAGRLMERAVSE--SVDIYTDYTGVADGDEAGDEKSGLRLSLNRCFYDDRWSRNRCLTSLDWSPQYPELLVASYH---NNEDSPN----------DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLVLGGTYSGQIVLWDNRVQKRTPIQRTPLSTSAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHGDVNN-FIVGSEEGSVYTACRHGSKAGVTETYEGHQGPVTGISAHSVQGAIDFSHLFLTSSFDWTVKLWSV-KENRPLYSFEDNG-DYVYDVAW 567
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: A0A8J4Q098_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q098_9MYCE)

HSP 1 Score: 241 bits (615), Expect = 1.860e-67
Identity = 139/365 (38.08%), Postives = 207/365 (56.71%), Query Frame = 3 
Query:  519 VVEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQ-HRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSHE---------------------GVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDANPSSSK-SLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            V+ ++   +K+ IL +D F+ F  +SS+V+ERAL   +++D+L+DY     D S     G+ L    TL ++RW + R++TD+ WSP  PELV++SYSA   G             + D DG+VLVWS+     +PEY  + QSPV+T  F  + P +I+GGTYSGQ+V WDTRAKS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ STD ++C+WN   L QP++ + L++                      G  + ++++   E +E  Q  +G+E G +     H       E+Y GH+G +TSVD +PS          +SSS DWT +LW   K   P+ +      DYV DA+W
Sbjct:  209 VIPELDDFEKQNILDSDAFKSFFTKSSKVIERALYLDDSVDILVDYTL--SDDSKSKSSGKELKLVATLADERWTKHRSVTDINWSPKHPELVVSSYSANEAG-------------SHDPDGVVLVWSVNNYFQKPEYVFNCQSPVMTTFFSKFHPTLIVGGTYSGQIVIWDTRAKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDAKLCSWNLENLLQPIETIELNNTKNTSSSGXXXXXXXXXXXXXXGSSIAVTSLIFPE-NELSQFYIGTEEGVVCQASRHGSKIVMNERYKGHFGPITSVDLHPSKGNVDFSQYFISSSTDWTVKLWST-KKEAPIYSF-EDYVDYVYDARW 555
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BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Match: A0A6L5C6N5_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5C6N5_9INSE)

HSP 1 Score: 236 bits (602), Expect = 1.100e-66
Identity = 140/346 (40.46%), Postives = 202/346 (58.38%), Query Frame = 3 
Query:  522 VEDMSSDQKRKILQTDHFQDFLRRSSRVLERALGEKEALDVLLDYA-ADEGDSSLRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTNTDADGLVLVWSLAMQ-HRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQVVEWDTRA-KSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVCTWNPSQLNQPLQVMRLSH-EGVPVMISTMAVAEGDEQKQLVVGSESGGIYTTPLHFRNSGAVEKYDGHYGLVTSVDA-NPSSSKSLRGLVLSSSVDWTTRLWRLGKTNNPVQTLTHGTYDYVCDAKW 1544
            + ++S +QK+ I+ ++ F+ F+  S R++ERAL E+   DV +DY+ A  G+       G +L+      ++RW + R +T L WSPH PEL+LASY +     ++P           D DG+ LVW+   + + PEY    QSPV++A F  ++PH+I+GGTYSGQ+V WD R  K  P+QRTPLSA+ HT+PVY L + GT NA +L++ STDGR+C+W+   L+QP + M L + +G  + + ++A    D     VVG E G I T   H   +G +E Y+GH G VT +D  N         L LSSS DWT +LW L K N P+ +L     DYV D  W
Sbjct:  100 LRELSEEQKQMIILSEEFRRFIDHSGRIMERALAEQ---DVCIDYSGAMGGEDGADEKSGAKLSLNRVFVDERWSKSRCVTSLDWSPHYPELLLASYHSNE---DSPH----------DPDGVCLVWNTKFKKNTPEYIFHCQSPVMSAIFARFNPHLILGGTYSGQIVLWDNRVQKRTPIQRTPLSASAHTHPVYCLSVVGTPNAHNLISISTDGRLCSWSLDMLSQPQETMELQNKQGKAMAVKSLAFPNNDVNN-FVVGCEEGAICTACRHGARAGVIETYEGHQGPVTGIDTHNVQGPMDFSHLFLSSSFDWTIKLWSL-KENKPLYSLEDNG-DYVYDVAW 426
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4782.11917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FML5_ECTSI1.410e-24473.97Putative: similar to cytoplasmic dynein intermedia... [more]
A0A836C896_9STRA6.980e-9647.77WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
F4PS77_CAVFA1.040e-7541.76Cytoplasmic dynein intermediate chain n=1 Tax=Cave... [more]
D3AZM5_POLPP3.550e-7441.69Cytoplasmic dynein intermediate chain n=1 Tax=Poly... [more]
UPI00064492574.260e-7440.40hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI000B8E9CE91.190e-7040.28cytoplasmic dynein 1 intermediate chain-like isofo... [more]
A0A2J7R9K8_9NEOP3.930e-7038.80Cytoplasmic dynein 1 intermediate chain n=4 Tax=Te... [more]
A0A2J7R9J9_9NEOP1.400e-6838.80Cytoplasmic dynein 1 intermediate chain n=15 Tax=T... [more]
A0A8J4Q098_9MYCE1.860e-6738.08Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A6L5C6N5_9INSE1.100e-6640.46Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4782contigH-elongata_contig4782:439..8980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score685.6
Seed ortholog evalue1.6e-194
Seed eggNOG ortholog2880.D7FML5
KEGG koko:K10415
KEGG Pathwayko04145,ko04962,ko05132,map04145,map04962,map05132
GOsGO:0000003,GO:0000280,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005816,GO:0005856,GO:0005868,GO:0005875,GO:0005938,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007097,GO:0007127,GO:0008150,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022402,GO:0022414,GO:0030286,GO:0030473,GO:0030705,GO:0030863,GO:0030981,GO:0030989,GO:0032781,GO:0032991,GO:0035974,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045503,GO:0045504,GO:0046907,GO:0048285,GO:0050790,GO:0051179,GO:0051234,GO:0051321,GO:0051336,GO:0051345,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0061982,GO:0065007,GO:0065009,GO:0071840,GO:0071944,GO:0072384,GO:0099111,GO:0099568,GO:0140013,GO:1902494,GO:1903046,GO:2000574,GO:2000576,GO:2000580,GO:2000582
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG1587@1,KOG1587@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD domain protein similar to cytoplasmic dynein intermediate chain
Ec32 orthologEc-23_000750.1
Exons13
Model size1789
Cds size1428
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930789.132028-UTR-H-elongata_contig4782:438..5571622930789.132028-UTR-H-elongata_contig4782:438..557Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4782 439..557 +
1691679570.9084015-UTR-H-elongata_contig4782:438..5571691679570.9084015-UTR-H-elongata_contig4782:438..557Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4782 439..557 +
1622930789.429504-UTR-H-elongata_contig4782:8738..89801622930789.429504-UTR-H-elongata_contig4782:8738..8980Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4782 8739..8980 +
1691679571.0798037-UTR-H-elongata_contig4782:8738..89801691679571.0798037-UTR-H-elongata_contig4782:8738..8980Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4782 8739..8980 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930789.1470456-CDS-H-elongata_contig4782:557..5661622930789.1470456-CDS-H-elongata_contig4782:557..566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 558..566 +
1691679570.9239507-CDS-H-elongata_contig4782:557..5661691679570.9239507-CDS-H-elongata_contig4782:557..566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 558..566 +
1622930789.1565497-CDS-H-elongata_contig4782:847..9991622930789.1565497-CDS-H-elongata_contig4782:847..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 848..999 +
1691679570.9331117-CDS-H-elongata_contig4782:847..9991691679570.9331117-CDS-H-elongata_contig4782:847..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 848..999 +
1622930789.2735906-CDS-H-elongata_contig4782:1476..15901622930789.2735906-CDS-H-elongata_contig4782:1476..1590Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 1477..1590 +
1691679570.9492154-CDS-H-elongata_contig4782:1476..15901691679570.9492154-CDS-H-elongata_contig4782:1476..1590Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 1477..1590 +
1622930789.2931945-CDS-H-elongata_contig4782:2128..23121622930789.2931945-CDS-H-elongata_contig4782:2128..2312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 2129..2312 +
1691679570.961866-CDS-H-elongata_contig4782:2128..23121691679570.961866-CDS-H-elongata_contig4782:2128..2312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 2129..2312 +
1622930789.308122-CDS-H-elongata_contig4782:3463..36161622930789.308122-CDS-H-elongata_contig4782:3463..3616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 3464..3616 +
1691679570.978083-CDS-H-elongata_contig4782:3463..36161691679570.978083-CDS-H-elongata_contig4782:3463..3616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 3464..3616 +
1622930789.3215256-CDS-H-elongata_contig4782:4280..44471622930789.3215256-CDS-H-elongata_contig4782:4280..4447Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 4281..4447 +
1691679570.990944-CDS-H-elongata_contig4782:4280..44471691679570.990944-CDS-H-elongata_contig4782:4280..4447Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 4281..4447 +
1622930789.3342164-CDS-H-elongata_contig4782:5051..51691622930789.3342164-CDS-H-elongata_contig4782:5051..5169Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 5052..5169 +
1691679571.000294-CDS-H-elongata_contig4782:5051..51691691679571.000294-CDS-H-elongata_contig4782:5051..5169Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 5052..5169 +
1622930789.3468797-CDS-H-elongata_contig4782:5449..55491622930789.3468797-CDS-H-elongata_contig4782:5449..5549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 5450..5549 +
1691679571.0100029-CDS-H-elongata_contig4782:5449..55491691679571.0100029-CDS-H-elongata_contig4782:5449..5549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 5450..5549 +
1622930789.3603175-CDS-H-elongata_contig4782:5885..59881622930789.3603175-CDS-H-elongata_contig4782:5885..5988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 5886..5988 +
1691679571.0226972-CDS-H-elongata_contig4782:5885..59881691679571.0226972-CDS-H-elongata_contig4782:5885..5988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 5886..5988 +
1622930789.3738508-CDS-H-elongata_contig4782:6950..70171622930789.3738508-CDS-H-elongata_contig4782:6950..7017Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 6951..7017 +
1691679571.0389013-CDS-H-elongata_contig4782:6950..70171691679571.0389013-CDS-H-elongata_contig4782:6950..7017Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 6951..7017 +
1622930789.389161-CDS-H-elongata_contig4782:7630..76991622930789.389161-CDS-H-elongata_contig4782:7630..7699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 7631..7699 +
1691679571.049919-CDS-H-elongata_contig4782:7630..76991691679571.049919-CDS-H-elongata_contig4782:7630..7699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 7631..7699 +
1622930789.4025915-CDS-H-elongata_contig4782:8131..81811622930789.4025915-CDS-H-elongata_contig4782:8131..8181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 8132..8181 +
1691679571.0622032-CDS-H-elongata_contig4782:8131..81811691679571.0622032-CDS-H-elongata_contig4782:8131..8181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 8132..8181 +
1622930789.416878-CDS-H-elongata_contig4782:8596..87381622930789.416878-CDS-H-elongata_contig4782:8596..8738Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 8597..8738 +
1691679571.071876-CDS-H-elongata_contig4782:8596..87381691679571.071876-CDS-H-elongata_contig4782:8596..8738Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4782 8597..8738 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4782.11917.1prot_H-elongata_contig4782.11917.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig4782 558..8738 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig4782.11917.1

>prot_H-elongata_contig4782.11917.1 ID=prot_H-elongata_contig4782.11917.1|Name=mRNA_H-elongata_contig4782.11917.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=476bp
MPKSVEFYDKACQADLGGASGAHGVGIAGGVETEAGTQSSSAKKTPDKRR
NHLRVFGRGGKGVPVHEGSEGEELGHSSGGGPSLVAASSPLRSGAGGPRP
MVSTPVSKLGRLPDGVGLFSVPMTPPQQQQPSTVVEDMSSDQKRKILQTD
HFQDFLRRSSRVLERALGEKEALDVLLDYAADEGDSSLRGDQGQRLNEAM
TLHEDRWCQERALTDLQWSPHRPELVLASYSARGHGVEAPSSSSLLTTTN
TDADGLVLVWSLAMQHRPEYQLSSQSPVLTARFHPYDPHVIIGGTYSGQV
VEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTDGRVC
TWNPSQLNQPLQVMRLSHEGVPVMISTMAVAEGDEQKQLVVGSESGGIYT
TPLHFRNSGAVEKYDGHYGLVTSVDANPSSSKSLRGLVLSSSVDWTTRLW
RLGKTNNPVQTLTHGTYDYVCDAKW*
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mRNA from alignment at H-elongata_contig4782:439..8980+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig4782.11917.1 ID=mRNA_H-elongata_contig4782.11917.1|Name=mRNA_H-elongata_contig4782.11917.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8542bp|location=Sequence derived from alignment at H-elongata_contig4782:439..8980+ (Himanthalia elongata Himel1 dioecious)
ACGCAGAGGCCGGCAGCGGGCCTGCAAACGGGTCCTCCAGCTTATCGAAA
TCGGACGGGCGCATTGCCGAACGGCTGAGCTCCCTCACCATCACATCTGG
GCTGGCTGCCGTACACGTCATGCCAAAGGTACAGTACGCGCTATGTGTAC
AGCTGCCGTAAAGTTTCTGTCGCCTCAGCAAAACGATGAAGCACTAGAAA
CAGTCCGGATGGCATATGAAACACGCCTCCTTCCATCAGCATGTACCGGT
ACTGTCGCATGGACGGTACCGTCGAGCGATGACACATGAAGCATGACATA
TCAATAAGATCAATAAGATATCAAATGTTCTACAGCGTCGGTAAGGTACA
CACACTGTTCAATGGAGTGATGATCATTTTCATTCGTTCGGTGTTGGTCT
CGTGTTCAGTCGGTTGAGTTTTACGACAAGGCTTGTCAGGCTGACTTGGG
CGGGGCCTCGGGGGCGCACGGGGTCGGGATAGCGGGAGGCGTTGAGACGG
AGGCTGGCACTCAGAGCTCTTCGGCGAAAAAGACGCCGGATAAAAGGCGA
AACCATCTCAGGTAGAGTATTATAAATAGAACCGTACTAAATGAACACAC
TACACTACACGCTACTTCCTGTACGCTTCAAGTATTTGCTCCATTACAAG
ACAGTACAGAAGAGAACTTCGATGGTACCAACAGCACAGGACGAAACCCG
TATCGAGGCGTACTATTCTCCAGTATTATTATTTTTTAGCTACTGCACTG
GGACTTGTTTTTTTAGAGATATTTGTGTCTACCGGTACTTACTGTAGTTG
GTGTTGAAATAATTATATTTTTTCTCCGCGCAATGAACAAACGCCCCGTG
GATTCAGATTTAAATTAATATATGTGTGTATTTTGTGGATACAATTACAG
TATAGTATAGTGAAAGACTAGAAGGGTGAGGAGACGTGGGAAATCCAAAT
ACAGTATGCTGATTCTCCTTAACATTGACCCCTCCCTTATGTATTAATGT
ATTAATGTATTAATCTACTATTAATAATATATTAATAGGGTGTTCGGCCG
TGGTGGAAAGGGGGTACCGGTGCACGAAGGCTCTGAGGGGGAAGAATTGG
GGCACTCTTCCGGCGGTGGACCCAGCCTCGTCGCCGCATCCAGTCCATTA
AGGTAAAGCAGCACCTATTGGGCAGAGTTTTTTATAGTACCACTGATACT
AATATATATCAAGGACTCGGACACCCACAGAAAGTTTGTTGTGCTTTGTT
TGTGTTGCTTTGCTGGCACCTTGGCAGAGGAGGGTTTTATTTCTTCCTTC
CTTTCTTTCTTTTCTTCTCAAACACCGAAAAATATCACAGTACGCAAAGA
AATACAGCAATAATCTTCGAGTCAAGCTACTCGTCAGCCAGAGTTATGTT
TCTTGTTTTTAGCTACATGCGGTAGCGATTGCTTTCGCTAAAAAGCGCAA
TGCAAGAGATGTCATTGACACTTGAGCAACATTGAGTGAGGCAGTCGCGC
GAGCCTTCCTTCCGGCACACCGCTTTCCCAATTACAGTATTTAGTACAGT
ATTCATTATGAAGTACAGTTAGTTAATGTTGGAGTCGACGGGACAGTCTG
TGTGCAACGGTTACTTTATCTCCCTTTGACACTTCATTTTGATATTAATA
TTGATATTAATATTAATTATACTTCACTTGGGAGTGGCAGGAGTGGAGCT
GGAGGACCTCGACCAATGGTATCCACCCCAGTGTCCAAGCTTGGGAGATT
GCCGGACGGGGTCGGACTGTTTTCCGTTCCAATGACGCCGCCGCAGCAGC
AGCAACCGTCTACCGTGGTCGAGGACATGTCGTCTGACCAGAAACGGAAG
ATCTTGCAGACGGACCACTTTCAGGTGTGGGCCGCGTTGATACTGACTAG
GATCATGATCATGTCAATTTCGTCTGTCTTGGCTTCTCTAAGCGCCGATG
ACTTCTCTCGGACGCCGAAATAGATCAAGTCGTGGTAGAGGTCAAAAACT
TGGGAGGGTTTAGTTCCTCGCCTCTTTTGAATCGCACTGTTTTTTCAGTG
AGATGAAATATTTAGTTTGCTGCTGCAAGGTTCCCGCCAGCAGGCGTTTC
TGTAGAGAAGGCTACCGAGGATTGAATCTGGTTCCGGTCCTGTCCCGCTC
ATGGTGTGTGATTGTGTCAGCAGCTGAGCAAAGATGGAAAATATATAAAT
ACGGTAAATAAGAACATGGCCACTGCTTTACATGCAGGAAGAGATTTAAA
AGATATTATATGGCATGACGTCACGAGGTGGTGGCCACGGCAAATATAGA
AAGAGATATTAGAAATTGAAAAAAATATTATATAAATTATAGATTATACT
CTACCAGGTAAAGAGGCAGACAGAAAGAAAACGCGGGTTTCCGCTCCACA
TCCATCCCCAATTCTCCATTCATCGCTCTCCATTCATCACATGGATCGAA
GAGGGGGGAGGGGGGAGTGGAGAGGGAGTGTACTCAGCAACTTTTAATAG
CATCCTGCCCCCATCTTCCATCTTCCATCTCTTATCTCCCATCTTCCTCC
TCGCCTTATCCATCCCATGCAGTAGTAGGAACTTAGTTGGGCAGACGGGC
AGACTGTATTTTGTTCTCTGCCACACTTGGGTTTGATGGTTTAATGGTTT
GATAACGACGAGTGACGAGTATTGCAATATTGCACTATTGCACTAAAGAT
GGTCTGATGGGCGCTGATGGAGTAGTGGACCCTTATTTCTCTCCTTTTTC
GTCACGTAACTGTTTTTGGTTGAAGTGGTTGTTCGACTCTAGAGCTCTAC
AGCTAGCGTCAAGTAGAAAAGTTGAAGAAACATGTTAAAAAAATATCACC
AGAATGGCACGCCTGCGGCATGGCCGTCTGCAGTTCGGTCCTACGGGTGA
TGATTTGGATCACCCATCACCATGACCATCACCCATCACCATGACCATGA
CCCCCTCGAATGCACTATTTAATAGTAATGTTAATAAACCTCTCTTCTTG
TTCAAAATCAATGAAACTTGGGCAGGATTTCTTGCGAAGATCCTCGAGGG
TGTTGGAGCGCGCTCTTGGCGAGAAAGAAGCGTTGGACGTGCTGCTGGAC
TACGCCGCGGATGAGGGAGACAGCAGCTTGAGGGGAGATCAGGGTCAGCG
ACTGAACGAGGCCATGACATTACACGAGGTGTTGCGTCCGTCCGATGAAA
AAACATTCAAGATATAGAAAATAAAGCAGAAAGCGACGCGAGCGTTTTTC
TTCCGATACGCACGACATGCTTAGATCCGATATTTTAATGTGGCGCAGGA
CCGATTCATGACTGATTCTCCGTCCCGACGTTGCGCGATTTTGTCACTTT
TTTTTACCTCCTCGATGTCCCCATTGTAATGCTAACCCCGACACCACTGT
TCTGCATTGTATTTTATTGAACTAGACTAGACTACAGTATAGACTGAACT
GCTGGTGTCGGCAACACCCGCTGCGCATTATTCGCCCGAAGTAGCTCGCC
CTCTCAAGGCATGTCTCTGTCCGTAACCCCTCCCCACCCCGTCCCTCTGA
AATGATGACGTCATGACGATTATCATGTCCCCTGTATGATGCACCAAAAC
GGATTATAATAGTATCCCCCTCCCTTCATTGGTTCGTCGCTATATCTGCG
GTTGTCTGCGGTTGTACACTAGCGTCTATCTCTCTTCTGCACCAGCGTAT
ATATACAGTAGGTTCTGCATTAGTATATAATATATATATGTTGTACACTC
TATATCTCTGTTGTATGTGCTCGTGAAAACATTAGTTAACTCTCTCGTAC
GTTTTGGGTGCAATCGATTATTGTTCGGGGCTGCCGCTCTAGGATCGGTG
GTGTCAGGAGCGCGCCCTCACGGACTTGCAATGGTCTCCGCACCGGCCGG
AGCTCGTACTGGCAAGCTACAGCGCAAGGGGACACGGTGTGGAGGCCCCC
TCCTCTTCGTCGCTGCTGACAACCACAAACACGGACGCCGATGGTCTGGT
GCTCGTGTGGTGAGCCCTGGGACGTGGAAACACAGCATAGCTCCACTACG
TGCGATGCCCTTTTTTTGACATCGTATTGTGGGAAGTGTTTGTTCTTCTG
TAGTATTTAGTAGTATAGTGTAGTATTTAGTAGTATAGTGTAGTATTTAG
TAGTATAGTGGAGTATTTAGTAGTATAGTGGAGTATTTAGTAGTATAGTG
GAGTATAGTCTAATCTAGTTTAGAGTGTTATTTCGTTGCCCTGTAGTTAG
GAGCACCGAGTTGTGATGTTTTGTTTGTTTTATACACTATTATGCAACAT
ACATATTACACTACGGATGAAGATATCTCAACCTCTGATATTACCCATGT
AAACTTGTATATAAGTATTAATATTGTGTGTCATACAAATAGTATACACG
TCGGGTAAGGTATGGGAGGGCTGCTTGGCGGCGACATGGTTATCCGTTTA
AATTCGCGAGAGAGTACGTATGACACGTATGACGTCAAGCTATATTTTCT
CGGTCAAAAATATTTCGAGCATGTTATTTTGCTTTTTTATCTCTCTTCCA
AGTATTTCGGTTTTGAGCATTGAGAGCTCTCTTCCACCCACGCGATGCAT
GTCTTGGCGACAGGTCTCTGGCGATGCAGCACAGGCCGGAGTACCAACTG
TCCTCCCAGAGCCCTGTCTTGACTGCACGTTTTCACCCTTACGACCCGCA
CGTGATCATTGGGGGAACCTACTCCGGGCAGGTGAGTAAACCACCCATTT
AGTACCATAAAAAATAAGGCTGCTCCGACACGAGTTGTTTTTGTTATGAA
CTTTGGCTTTCCGACTGTTGTATTGATTGTAGTACCGTCGACACAGAAAA
AAATAATAATCCAGATTGTAGCTTGTAATCTGCACAACATGGGGAGGACA
TAGAAAGGGATGCATGCAGGCACAACGACAGCGTACCAGTGTTCCATAAT
ATATCCCCCCTCGCCCCATCTCTATATTACCTACTTTATGTGCGTTGCTT
TGTTTTCCCAGGTAGTCGAGTGGGACACTAGAGCCAAGTCGCTTCCTGTG
CAGCGAACGCCCCTGTCAGCAACAGGGCACACGTATCCCGTCTACAACTT
GCACATTGGAGGTCAGGGAACGCGCCACACGCGATCAGCAAACTGTTAGC
AGGCGCCACAAACGGCCGCCTCATCAAGACTACCGTCTGCGACCACCGAT
TGAGGCGCAGGCTCTTTGCGCAGACCAGACCACAAAGCGTTTTATTGTGT
TTATTTTTGACTCAGATGATAACGGTGATTGGTGACATCACGCGGAAGAT
TGCAGCCTAGTGGACAAGATCGAGATCTGACGTCGTGTTGTTTTTTTAAT
CTAATAGCCTTTCTGTCGTGTCCTCGCTGCCCTCGTTCGCTCGTCTTGCT
TTTTTTATCTTGTTTTATCTTGTTTTTAATGCCTCGTCGTGTTTCAGGGA
CTGACAACGCACCTTCCCTCTTGACTGCGTCCACGGACGGGCGAGTCTGC
ACGTGGAACCCAAGCCAGCTCAACCAGCCCCTACAGGTCATGCGACTCAG
GTGACCTGTCTCGCTGGGAGGGATGTTGGCAGCGGCCAAAGCAGTCGCGG
CAGCGGCGACGGCTAATTGAGGTTTAGGATTAGTTTGGGCTGTGAGGACA
GTTAAGGTAATGTCCGATTAATACATGCTGGATGTATGTAGGCTGGATGA
GGGATGAGGGAACGGCGGCGGCAGACGAGAGAAAATATAAAAAAAGCTAC
TCGTATATTAAATTATATCGGTATAGCCTAGAGTATCAACACGTAGTCAT
TCGTATTCATTATTAATAGTACATGGCTGAAAGAAGCAGTACCAAAATGA
CGTAAATTAAAAGCCATGGAGTGAAGTGTAATAGAAATGGAACACCTGGT
TGAAGTAAACCGAGGCGTTTTTAAAAATGCAAGAGGAAGAGGTGGTGTAG
CCCCATTGAAGGGATAGTGTAGTGTGGTGTGGTGTAGAGTTGGTTAGGCG
CCTTCGATATCTGATTGATCTGATTGGTTTTTAGTCAAATCAGCTCTCTC
TCTCCTATATAATAGTGGAATGTTGTGGGTAGTTTTTTCCCCGTCTCATC
CTACCACACTGACTGGATTAGGCTTCCGTTTTTTCTCTTCGCCTCTCTTG
GGCCTTTGTTTTTTAGTGGCAGTAGTCGTGGTAATAATGCTCATCTTCAA
GAAGATATGTGTCAAATACAGCACAGCACGTACCGTATATCGTATTTTTT
TTATCTCCCCTCCCAAAGTGTCAGTCGTTCCATCACTTTCTTCGCCGTGT
TTAACATATATATATATTACCTATTACCTATTACCTTAAAAACGGCAAGC
GCCGGATCATCTCTCTCGAGGATTTCTCACGAGACCTCTGTCCGTCCGTC
CGTCCGTCCTTCCGGGTAACGCCTTCGGATTATGCCTGTGGATGATGCCT
TCGGATGATCTTCGCTACCCCACCACACAACAATACCACCCCACCCCGCC
ATGATACCCCAGTCACGAAGGAGTGCCGGTGATGATCAGCACCATGGCCG
TCGCAGAGGGTGATGAACAAAAACAGTTGGTGAGCGCGTCTTGGCGGTTC
TGACCTTATTCTGGGTTCTGGGTTCTGTGTTCTGTGTTCTAAATAAACCA
CCGCCTTTGACCTTATTCCGAACGCCTCCTAACAGCCTAGAGTTTATAGG
ACAGTATATTACACAGTAAATTGTGCAGTACATTGTACAGTATATTATAT
AATCTACTGTATTACTATATTAGAAGAATGGCGAGAACTATTACACGCCA
CAAAAAGTGCCAGCTTCCATGCACCATGCAAAACGGGGGGGGGGGGGGGG
AATGCGAAAAAAAGCTGCTCATACTGAAATTGGTAATGCGAAATATTACT
ATAAAACCTTTTATTTATTTTTCTGGGTAAGTAACTGATTGATAGCTTTC
CGAAGTCTCGACAAGTACAAATATGAACCCCGTAAAACGACAAGCTTTCT
GAAAATGCTACTTTACGAAACCTATAAATACATGCCTCGACCTGTGATTT
TTCATAAACCTGAGGATGTGCGAGATATAAGCTCAAGGTGTTTGAGAGAG
CGCCTGAACGAAAGAATTAGCTTGATGCTCACCTCTTTTCGATGAGTACT
ATCCCTTGTGTCTTGTGGCTTGGATCGATCGCGTTCCATCAGGTTGTTGG
CTCGGAGAGCGGCGGTATCTACACGACCCCTCTTCATTTCCGTAATTCGG
GCGCTGTGGAGGTGAAATCGCAGGCGTCCGGTATGCAAGTAGTGAACCTG
GGCCAGCCCTGCGCTTCAGACCTGCCCTTCGCCCTATGTCCCTCCCATCG
CTTTTGTCACCCTATGTCCTCACGAGCCATCATAAAATATCATCAGACAT
CCGAATTCACCCGTAATCAACCATTATCGGGCGTACAGCTATGTTCGTTC
GACGAGGTAGAGTTTGCTAGGCGTCGTCCAAGACGAAGCATTTGTCGAAC
TTTTGTAAACGCATTAGAGTTAAGAAGCGCCGGTTAATTTTTGTATCGCC
TTTTTTCCGGGGCGTTGCAGTGCCGCAGACGGCGTTTGTCCTTGACAAAA
GGGGAACGGAAAGGGTGGACGCATCACAATTCACAAATCGTCAATTTTTT
CACCGTTATCCATGATCCGTTTGTTATTTTGTGCGCTTTCCAGAAATACG
ATGGACACTACGGGCTAGTCACGTCAGTTGATGCGAATCCTAGGTACGGA
AAAGTAGGATGTAGGATGTATATTTTTCCTAAAAAAACTTATGAACTCAT
GCCAACCCTCCGAGCATCCATGTCTTTTTAGCACTTAGCACCGTGAGAGG
TGCAGTAGGATCGAAGGACTCACCCGTTAGGTCATTCACGACGTAGTCGA
GGGCTCCGATAGACACATTTTCAGAAGAAATTGAAAAAAAAACAACGTGA
AGCGCTCGTGACTTTACCAGCGCTATCCCCTACATCGCCATGCTACCATG
CCTTACTGTTGCACTACATCGCCAAACATTTCGTTTAAATTTAAGCCTAC
AAAAAATGGCTGAAATATGTCGAAGATGATAAAGATATTTTACCGCGTCC
AAGACGAACAGTTTTTCTCTGGCCCAAACGTGATCCTTGCGTCGCGGGGT
TTTCGCAGCTCGTCCAAGTCCCTGCGAGGCCTTGTTCTTTCTTCCTCTGT
GGATTGGACGACTCGCTTGTGGCGACTGGGGAAGACAAATAATCCCGTAC
AAACGCTCACTCACGGAACGTACGACTACGTTTGCGACGCCAAATGGTAA
GGGAGTGAAAGAGTGGGGATATTAGTTTCGCGATGAGCAATAAAATTCCT
TTGCTTCTTTGAAATACACCTATTTTTGTGGTTTGCTCGCGTCTACCTTG
TCCGACAAAAATCGTGCCCCGCCTTCATAACGACCACTCATGATACGGAA
CTCTGTTCTTGGTAGGCCATTGTTGGCAGAGGGTCGCCGCAAATGCTGGT
GCTTTAAAATACGATACGAAACGTTTTGATGTAACTGCGATG
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Coding sequence (CDS) from alignment at H-elongata_contig4782:439..8980+

>mRNA_H-elongata_contig4782.11917.1 ID=mRNA_H-elongata_contig4782.11917.1|Name=mRNA_H-elongata_contig4782.11917.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2856bp|location=Sequence derived from alignment at H-elongata_contig4782:439..8980+ (Himanthalia elongata Himel1 dioecious)
ATGCCAAAGATGCCAAAGTCGGTTGAGTTTTACGACAAGGCTTGTCAGGC
TGACTTGGGCGGGGCCTCGGGGGCGCACGGGGTCGGGATAGCGGGAGGCG
TTGAGACGGAGGCTGGCACTCAGAGCTCTTCGGCGAAAAAGACGCCGGAT
AAAAGGCGAAACCATCTCAGTCGGTTGAGTTTTACGACAAGGCTTGTCAG
GCTGACTTGGGCGGGGCCTCGGGGGCGCACGGGGTCGGGATAGCGGGAGG
CGTTGAGACGGAGGCTGGCACTCAGAGCTCTTCGGCGAAAAAGACGCCGG
ATAAAAGGCGAAACCATCTCAGGGTGTTCGGCCGTGGTGGAAAGGGGGTA
CCGGTGCACGAAGGCTCTGAGGGGGAAGAATTGGGGCACTCTTCCGGCGG
TGGACCCAGCCTCGTCGCCGCATCCAGTCCATTAAGGGTGTTCGGCCGTG
GTGGAAAGGGGGTACCGGTGCACGAAGGCTCTGAGGGGGAAGAATTGGGG
CACTCTTCCGGCGGTGGACCCAGCCTCGTCGCCGCATCCAGTCCATTAAG
GAGTGGAGCTGGAGGACCTCGACCAATGGTATCCACCCCAGTGTCCAAGC
TTGGGAGATTGCCGGACGGGGTCGGACTGTTTTCCGTTCCAATGACGCCG
CCGCAGCAGCAGCAACCGTCTACCGTGGTCGAGGACATGTCGTCTGACCA
GAAACGGAAGATCTTGCAGACGGACCACTTTCAGGAGTGGAGCTGGAGGA
CCTCGACCAATGGTATCCACCCCAGTGTCCAAGCTTGGGAGATTGCCGGA
CGGGGTCGGACTGTTTTCCGTTCCAATGACGCCGCCGCAGCAGCAGCAAC
CGTCTACCGTGGTCGAGGACATGTCGTCTGACCAGAAACGGAAGATCTTG
CAGACGGACCACTTTCAGGATTTCTTGCGAAGATCCTCGAGGGTGTTGGA
GCGCGCTCTTGGCGAGAAAGAAGCGTTGGACGTGCTGCTGGACTACGCCG
CGGATGAGGGAGACAGCAGCTTGAGGGGAGATCAGGGTCAGCGACTGAAC
GAGGCCATGACATTACACGAGGATTTCTTGCGAAGATCCTCGAGGGTGTT
GGAGCGCGCTCTTGGCGAGAAAGAAGCGTTGGACGTGCTGCTGGACTACG
CCGCGGATGAGGGAGACAGCAGCTTGAGGGGAGATCAGGGTCAGCGACTG
AACGAGGCCATGACATTACACGAGGATCGGTGGTGTCAGGAGCGCGCCCT
CACGGACTTGCAATGGTCTCCGCACCGGCCGGAGCTCGTACTGGCAAGCT
ACAGCGCAAGGGGACACGGTGTGGAGGCCCCCTCCTCTTCGTCGCTGCTG
ACAACCACAAACACGGACGCCGATGGTCTGGTGCTCGTGTGGATCGGTGG
TGTCAGGAGCGCGCCCTCACGGACTTGCAATGGTCTCCGCACCGGCCGGA
GCTCGTACTGGCAAGCTACAGCGCAAGGGGACACGGTGTGGAGGCCCCCT
CCTCTTCGTCGCTGCTGACAACCACAAACACGGACGCCGATGGTCTGGTG
CTCGTGTGGTCTCTGGCGATGCAGCACAGGCCGGAGTACCAACTGTCCTC
CCAGAGCCCTGTCTTGACTGCACGTTTTCACCCTTACGACCCGCACGTGA
TCATTGGGGGAACCTACTCCGGGCAGGTCTCTGGCGATGCAGCACAGGCC
GGAGTACCAACTGTCCTCCCAGAGCCCTGTCTTGACTGCACGTTTTCACC
CTTACGACCCGCACGTGATCATTGGGGGAACCTACTCCGGGCAGGTAGTC
GAGTGGGACACTAGAGCCAAGTCGCTTCCTGTGCAGCGAACGCCCCTGTC
AGCAACAGGGCACACGTATCCCGTCTACAACTTGCACATTGGAGGTAGTC
GAGTGGGACACTAGAGCCAAGTCGCTTCCTGTGCAGCGAACGCCCCTGTC
AGCAACAGGGCACACGTATCCCGTCTACAACTTGCACATTGGAGGGACTG
ACAACGCACCTTCCCTCTTGACTGCGTCCACGGACGGGCGAGTCTGCACG
TGGAACCCAAGCCAGCTCAACCAGCCCCTACAGGTCATGCGACTCAGGGA
CTGACAACGCACCTTCCCTCTTGACTGCGTCCACGGACGGGCGAGTCTGC
ACGTGGAACCCAAGCCAGCTCAACCAGCCCCTACAGGTCATGCGACTCAG
TCACGAAGGAGTGCCGGTGATGATCAGCACCATGGCCGTCGCAGAGGGTG
ATGAACAAAAACAGTTGTCACGAAGGAGTGCCGGTGATGATCAGCACCAT
GGCCGTCGCAGAGGGTGATGAACAAAAACAGTTGGTTGTTGGCTCGGAGA
GCGGCGGTATCTACACGACCCCTCTTCATTTCCGTAATTCGGGCGCTGTG
GAGGTTGTTGGCTCGGAGAGCGGCGGTATCTACACGACCCCTCTTCATTT
CCGTAATTCGGGCGCTGTGGAGAAATACGATGGACACTACGGGCTAGTCA
CGTCAGTTGATGCGAATCCTAGAAATACGATGGACACTACGGGCTAGTCA
CGTCAGTTGATGCGAATCCTAGCTCGTCCAAGTCCCTGCGAGGCCTTGTT
CTTTCTTCCTCTGTGGATTGGACGACTCGCTTGTGGCGACTGGGGAAGAC
AAATAATCCCGTACAAACGCTCACTCACGGAACGTACGACTACGTTTGCG
ACGCCAAATGGTAACTCGTCCAAGTCCCTGCGAGGCCTTGTTCTTTCTTC
CTCTGTGGATTGGACGACTCGCTTGTGGCGACTGGGGAAGACAAATAATC
CCGTACAAACGCTCACTCACGGAACGTACGACTACGTTTGCGACGCCAAA
TGGTAA
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