mRNA_H-elongata_contig4766.11902.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI) HSP 1 Score: 205 bits (521), Expect = 1.280e-58 Identity = 101/139 (72.66%), Postives = 117/139 (84.17%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHLAKASEYF-----GQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
DINKLI RKFKQ+P TQA+ RDCA V+GR+ LAK +F GQVTVGSS+VRNLA+TNNLP A+LA LVGLEGQ ELAG+GPPAQVVP+GATAGFD+HF+C+TEQVYRK K+ IN G HQFNLLAHTVPVS++L
Sbjct: 738 DINKLITRKFKQKPATQADMRDCAAVLGRDQLAKVDLHFRTLDFGQVTVGSSNVRNLAVTNNLPQAILAALVGLEGQSELAGTGPPAQVVPAGATAGFDVHFKCYTEQVYRKALKMCINNGAVHQFNLLAHTVPVSVEL 876
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A067D3T9_SAPPC (Calponin-homology (CH) domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D3T9_SAPPC) HSP 1 Score: 103 bits (258), Expect = 3.400e-23 Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHL-----AKASEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
D NKLIKRKFK P TQAE +DCAT + E L + +FG + V S S ++ ++TN+LPH +L L EL + P +QV+P+GATAGFD+ F EQV++K + S+N + + ++A VP+ ++L
Sbjct: 638 DENKLIKRKFKAAPVTQAEVKDCATTLTSEQLKLIVAGPKTIHFGLICVHSVSKKSFSVTNDLPHNILVTLHFNNDHEELKQTSPMSQVIPAGATAGFDLTFFSRAEQVFQKYVQYSVNGQHSFKLLIVAEVVPICVEL 776
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A1V9ZG56_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG56_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.190e-22 Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHL-----AKASEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
D NKLIK+KFK P TQAE +DCAT + E L + +FG V V S S ++ ++TN+LPH VL L EL + P +QV+PSGA AGFD+ F EQV++K + S+N + + ++A VP+ ++L
Sbjct: 643 DENKLIKKKFKAAPVTQAEVKDCATTLTSEQLKFIVAGPKTIHFGLVCVHSVSKKSFSVTNDLPHNVLVTLHFNNDHEELKQTTPMSQVIPSGAVAGFDLTFFSRVEQVFQKYVQYSVNGQHSFKLLVVAEVVPICVEL 781
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A485LET0_9STRA (Aste57867_20364 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LET0_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.870e-21 Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHLAKA-----SEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
D NK+IK+KFK +P TQAE +DCAT + E L + + FG+V S S ++ ++TN+LPH +L + EL + P +QV+P+GATAGFD F EQV++K SIN + + + A VP+ ++L
Sbjct: 642 DDNKIIKKKFKPQPVTQAEVKDCATTLTSEQLKQIVAGPKTINFGKVCAHSVSKKSFSVTNDLPHNILVTVHLANDHDELQQTTPLSQVIPTGATAGFDFTFFSRVEQVFQKYVNYSINGQHSSKLLVTAEVVPIRVEL 780
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A1V9ZZW5_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZW5_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.300e-20 Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHL-----AKASEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
D NKLIK+KFK P TQAE +DC T + E L + FG V V S S ++ +TN LPH +L L EL + P +QV+PSG+ AGFD+ F EQ+++K + SIN + + ++A VP+ ++L
Sbjct: 636 DENKLIKKKFKVAPVTQAEVKDCGTTLSSEDLKLIMAGPKTINFGLVCVHSVSKKSFTVTNELPHNILVSLHLNNDHEELRQTTPMSQVIPSGSVAGFDLTFFSRAEQLFQKYIQYSINGQHSFKLLVVAEVVPICVEL 774
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A024UTG8_9STRA (Calponin-homology (CH) domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTG8_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 5.820e-20 Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHL-----AKASEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLL--AHTVPVSIKL 402
D NK+IK+KFK P TQAE +DCAT + E L + FG+V V S S ++ ++TN+LPH + + EL + P +QV+P+GATAGFD F EQV++K +IN H F LL A VP+ ++L
Sbjct: 644 DDNKIIKKKFKPLPVTQAEVKDCATTLTSEQLKLIVAGPKTINFGKVCVHSVSKKSFSVTNDLPHNISVHVHLANDHDELQQTTPLSQVIPTGATAGFDFTFFSRVEQVFQKYVNYTINGQ--HSFKLLVTAEVVPIRVEL 782
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: W4GNF4_9STRA (Calponin-homology (CH) domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNF4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 5.820e-20 Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHLAKA-----SEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLL--AHTVPVSIKL 402
D NK+IK+KFK P TQAE +DCAT + E L + + FG+V V S S ++ ++TN+LPH + + EL + P +Q+VP+GATAGFD F EQV++K +IN H F LL A VP+ ++L
Sbjct: 646 DDNKIIKKKFKPLPVTQAEVKDCATTLTSEQLKQIVAGPKTINFGKVCVHSVSKKSFSVTNDLPHNISVHVHLANDHDELQETTPLSQIVPTGATAGFDFTFFSRIEQVFQKYVNYTINGQ--HSFKLLVTAEVVPIRVEL 784
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A6G0XXX0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXX0_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.020e-19 Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHLAKA-----SEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
D NK+IK+KFK +P TQAE +DCAT + + L + + FG+V V S S ++ ++TN+LPH + + EL + P +QV+P GATAGFD+ F EQV++K +IN + + A VP+ ++L
Sbjct: 629 DENKIIKKKFKPQPMTQAEVKDCATTLTSDQLKQVFAGPKAINFGKVCVHSVSKKSFSVTNDLPHNIFVRMNITNELDELQQTTPTSQVIPPGATAGFDLTFFSRVEQVFQKHVHYTINGQHNSKLLVTAEVVPIRVEL 767
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A7S3G9Q8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G9Q8_9EUKA) HSP 1 Score: 85.1 bits (209), Expect = 1.290e-16 Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDC-ATVVGRE----HLAKASEYFGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGFDIHFQCHTEQVYRKVFKVSINKGTAHQFNLLAHTVPVSIKL 402
D N++IK+KFK +P TQ E RDC AT+ RE S FG + VGSS + ++ N +L ++ + LAGS P AQV+P GATAGFDI + + +R+ IN QF + A VPV+++L
Sbjct: 45 DPNRMIKKKFKSKPTTQTETRDCKATLTPRELNKISCGPRSIDFGLICVGSSLKKCFSVQNETKANILVSVILSDDT--LAGSAPQAQVIPPGATAGFDICLTAKSPKTFRREIDYVINGLHTFQFEVAAQFVPVTLQL 181
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Match: A0A7S1XZ72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ72_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.390e-16 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 DINKLIKRKFKQRPDTQAEARDCATVVGREHLAKASEY-----FGQVTVGSSSVRNLAITNNLPHAVLAELVGLEGQIELAGSGPPAQVVPSGATAGF 279
D NKLI +KFK RP TQAE RDC T + L + FG+V +GS SV+N A+TN+ + V +L G E ++++ S P +QVVP+GA AGF
Sbjct: 38 DENKLILKKFKPRPTTQAEMRDCTTELSATDLLLVTGSHKVLDFGRVCLGSVSVKNFAVTNDFANCVYVQLEGFEPELQM--STPESQVVPAGAVAGF 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4766.11902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig4766.11902.1 >prot_H-elongata_contig4766.11902.1 ID=prot_H-elongata_contig4766.11902.1|Name=mRNA_H-elongata_contig4766.11902.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp DINKLIKRKFKQRPDTQAEARDCATVVGREHLAKASEYFGQVTVGSSSVRback to top mRNA from alignment at H-elongata_contig4766:2579..3828- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig4766.11902.1 ID=mRNA_H-elongata_contig4766.11902.1|Name=mRNA_H-elongata_contig4766.11902.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1250bp|location=Sequence derived from alignment at H-elongata_contig4766:2579..3828- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig4766:2579..3828- >mRNA_H-elongata_contig4766.11902.1 ID=mRNA_H-elongata_contig4766.11902.1|Name=mRNA_H-elongata_contig4766.11902.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig4766:2579..3828- (Himanthalia elongata Himel1 dioecious)back to top |