mRNA_H-elongata_contig47604.11896.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47604.11896.1
Unique NamemRNA_H-elongata_contig47604.11896.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: D7FW44_ECTSI (Aromatic amino acid permease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW44_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 6.580e-176
Identity = 283/484 (58.47%), Postives = 332/484 (68.60%), Query Frame = 1
Query:   10 LPLSRLLSLRAQRSDAFSLASTVPGTQDSTPFIGIGIAXXXXXXXXXXXXXXEKLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGNGRESIQEMAEASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVLGATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKAVASRGPT-------------------------------AAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQFPGGTAALAFVAAITCGYMLWQTIM 1368
            LPL+R    R Q    F   S+VPGT D  P +   I                  EE  G I++NSALVAGNM+GAGVLALP VT APGF+LSS AMV VWGYCL S I+VAECAG GR S+QEMAEASVG++AG  MCA FL SNYLLMVAYI QGAS    LP+   +  GP   SC+ D H APL+FT LVG  SL GPARF E+ANTALVG+I +SF GL+ATG+P +DV  LGLTPDAS+LP+MLPVA+CALTFQNVVPAVSKNL+GD  KI ASLAIGSG+PL+TYILWNAVVLG+ G +D +S    +  + SP+D L ATSP L +L+SVFS+SAI+TSFWGA+FSLMIE THL+ A+ S                                   A  LVL+PPT VSMACPDSF+TAL+Y G YVDPFLYG+APA MAY +R    H+ Q PGGT  LAFVA +T GY+ WQT +
Sbjct:   24 LPLTRCAGNRGQSGSVFPRWSSVPGTPDVFPPVESDIEIPQ--------------EESHGSILSNSALVAGNMIGAGVLALPSVTGAPGFVLSSTAMVVVWGYCLCSGILVAECAGQGRSSVQEMAEASVGKTAGNFMCAAFLMSNYLLMVAYICQGAS---SLPLFRPEFCGPVFTSCMKDFHLAPLLFTGLVGSVSLWGPARFVEAANTALVGLIAISFGGLVATGLPRVDVALLGLTPDASTLPAMLPVALCALTFQNVVPAVSKNLNGDARKIKASLAIGSGLPLMTYILWNAVVLGSTGSLDPNS----AVEMVSPLDALAATSPALASLVSVFSISAIITSFWGAAFSLMIELTHLVDALMSERRIGIFDTIGQFPMADDARSIDEVARHDQNVKLCATGLVLVPPTVVSMACPDSFLTALDYAGIYVDPFLYGLAPACMAYYMRSGDGHRAQLPGGTGGLAFVAVVTSGYIAWQTFL 486          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A836CN59_9STRA (Tryptophan/tyrosine permease family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN59_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.600e-68
Identity = 165/443 (37.25%), Postives = 234/443 (52.82%), Query Frame = 1
Query:  193 IITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAE-CAGNGRE-----SIQEMAEASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVLGATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKAVASRGPTAAMLVLLP----------------------------PTTVSMAC---PDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGV-------------------GNHKIQFPGGTAALAFVAAITCGYML 1353
            ++  +ALV GNMVGAG+LALP VT APGF+ +++AMV VWG+CL + +++AE CA +G       +++ +A A++G  AG L+ A F+A NYLLMVAYISQG+ ++  LPV   D  G   A         P++F   VG   L G AR  + AN ALV +I+ SF  L+A G PH+D  +L      ++LP +LPV +CA+TFQN+VP V+  L GD  ++ A+L  G+G+PL+ Y+ W+AV+LG            ++A +       G     LGA ++VFS +A+VTSF+G+  SLM E   LL      G T A  +  P                             T  ++A     D+F+TAL   G   DP LYGV PA MA+R+R                     G  +   PGG   L  V A++  +ML
Sbjct:  120 VLNAAALVGGNMVGAGILALPTVTAAPGFVPAASAMVGVWGFCLLTGLLIAETCAAHGAAHGAPATVRGIAAATLGPRAGALVGAGFIAKNYLLMVAYISQGSHVVGALPV--FDGLGGGGAFPDDAAALLPVLFAAAVGGFGLWGGARAVDGANAALVAVILASFAALVAAGAPHVDAAALLRGAAPAALPPVLPVILCAMTFQNIVPVVTTALGGDLPRVRAALVAGTGVPLLMYLTWDAVMLGQRAPPLAPLYDGAAAALGG-----GGGVDALGAAVAVFSFAALVTSFFGSCKSLMAEFEGLLSG-GGGGATWAEALARPLARLGXXXXXXXXXXXXXXXXXXXXXXXXTAAAVAAGDAQDAFLTALRIAGGLGDPLLYGVVPALMAWRVRDAAXXXXXXXXGGYATDETVDGAAETIVPGGKPMLGAVVALSVCFML 554          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A5B8MJA0_9CHLO (Tyrosine-specific transport protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJA0_9CHLO)

HSP 1 Score: 208 bits (529), Expect = 2.650e-58
Identity = 148/415 (35.66%), Postives = 216/415 (52.05%), Query Frame = 1
Query:  166 EKLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAEC-------AGNGRESIQEMAEASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLG-NIGGIDNSSIGSSSAGIASPMDVLGATSPVLGALISVFSMSAIVTSFWGASFSLM-IECTHLLKAVASRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLR-----GVGNHKIQFPGGTAALAFVAAITCGYMLWQTIM 1368
            E L+   G ++ + +LVAG  VGAG+LALP VT   G+L SSA ++  W Y   + +++AE         G G  S+  MAE + G    IL   T++  +Y L+VAYIS+G  L+SG+    +D F P LAS         + F  L+G T         +  NTALVG ++LSF G+LA      D + LG   D   + S +PV   +  F N+VP V+ +L+GD  KI  ++  G+ IPL+ ++LWNA +LG N+ G D     ++   I  P+ VL   + V G  I  FS+ A+ TSF G    L+      L   V ++      L L+PP   ++  PD+F++ALEY GTY    L+GV PA MA+++R     GV +     PGG   L  V     G +  QT++
Sbjct:   67 ETLQHQPGSVLGSVSLVAGTTVGAGILALPAVTAGTGYLPSSAVILGCWAYSCVTGLLLAEVNLFLMCELGRGGVSMLSMAEDTFGGPGRILAGTTYVFLHYSLLVAYISRGGELISGI----AD-FSPALAS---------VAFGSLLGVTIYASNPSVLDRVNTALVGGVVLSFFGILAVAFGKFDASQLG-HADVGRVMSCVPVVALSFVFHNIVPTVTSSLEGDRRKITTAIVAGTTIPLVMFLLWNAAILGYNLDGSD-----AADGSILDPLKVLEEDATV-GTYIMSFSLLAVATSFIGFVLGLVDFIADGLNMPVNTKSLVPFSLTLVPPALFAVVYPDAFLSALEYAGTYGVLALFGVLPAAMAWKIRERKDLGVADVPSLVPGGVPMLVVVGGAALGVITQQTLI 460          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A2Z6CRZ0_9NOSO (Aromatic amino acid permease n=5 Tax=Nostocales TaxID=1161 RepID=A0A2Z6CRZ0_9NOSO)

HSP 1 Score: 199 bits (505), Expect = 3.460e-55
Identity = 149/411 (36.25%), Postives = 215/411 (52.31%), Query Frame = 1
Query:  169 KLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGN-----GRESIQEMA--EASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGP--FLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKAV----ASRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQF-PGGTAALAFVAAITCGYML 1353
            KL    G ++ ++ALVAG  VGAG+LALP VT   G + S+  ++AVW Y L + +++AE + N     GR S+  +A  E ++G +   +  A +L  +Y L+VAYI+QG  +L       S V+G    L S +G        FT+L G    LG  +F E  N  LVG+++ SF GLL  G   +    L L  + S+L + +PV + AL + N+VP V   L+GD  K+  S+ IGS IPL+ ++ WNAV+LG++     SS       I  P+ VL  G    +LG L+S+FS  AI TSF G  + L+     +        ASR P  + LVLLPP  +    P  F TAL++ GT+    L G+ PA   ++ R    H   F PGG   L  +  I  G +L
Sbjct:   28 KLTHQPGSVLGSTALVAGTTVGAGILALPAVTLPSGIIPSTVLLIAVWLYTLVAGLLIAEVSINTMRLAGRPSVSLLAMIETALGLNGARMAGAAYLLLHYALLVAYITQGGEILMSAV---SHVWGVQNSLPSWIGTT-----AFTLLFGSIMYLGRGKFIEKLNNFLVGIVLASFLGLLLLGFTQVKGVHL-LFQNWSALSTAIPVMLVALFYHNIVPVVVTQLEGDSRKVRQSIIIGSAIPLLMFLAWNAVILGSV-----SSEMIHGKTIFDPIQVLRAGGGGELLGVLVSIFSEFAIATSFIGFVYGLLDFFQDIFATTQNKPASRLPLYS-LVLLPPIGLGAVNPSIFFTALDFTGTFSISILGGIIPALATWKQRQQLQHSNHFVPGGKLTLILMIGIALGIIL 423          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: K9WZ78_9NOST (Amino acid permease n=2 Tax=Cylindrospermum TaxID=56106 RepID=K9WZ78_9NOST)

HSP 1 Score: 199 bits (505), Expect = 3.990e-55
Identity = 150/423 (35.46%), Postives = 220/423 (52.01%), Query Frame = 1
Query:  169 KLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGN-----GRESIQEMA--EASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPL-----VFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSLMI---ECTHLLKAVASRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGV-----GNHKIQFPGGTAALAFVAAITCGYMLWQTIMM 1371
            +L    G ++ ++AL+AG  VGAG+LALP VT   G L S+A ++AVW Y L S +++AE   N     GR S+  +   E ++G+    +    +L  +Y L+VAYI+QG  +L              +A  +G  +  P       FT+L G    LG  RF +  N+A V ++I+SF GLL  G   +    + L  D ++L S + V   AL +QNVVP V   L+GD  KI  S+ IGS IPLI ++ WNAV+LG++   D   + S  A +  P+ VL  G    +LG L+S+FS  AI TSF G  + L+    + + L +   SR P  + L+L PP ++    P  F TAL+Y GT     L G+ PA M+++ R       G ++   PGG   L  V AI  G +  Q + M
Sbjct:   25 QLNHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGVLPSTALLIAVWLYALVSGLLIAEVTLNAMRLEGRPSVGLLVVVEKTLGKLGARIAGGAYLFMHYALLVAYITQGGDILISA-----------IAKILGMENVLPTWVGTTTFTLLFGGIMYLGRERFIQKLNSAFVAIVIVSFLGLLLLGGGQVKSAQI-LFQDWTALGSAVSVMCVALFYQNVVPVVVTQLEGDVHKIRQSIVIGSLIPLIMFLAWNAVILGSVSP-DMLKLASVGATVFDPLQVLRTGGAGELLGVLVSIFSEFAIATSFIGFVYGLLDFFKDISLLTQGGLSRLPLYS-LILFPPMSLGTLNPSIFFTALDYTGTLSISILGGIIPALMSWKQRQAQELTNGINQPLVPGGKVTLIVVIAIALGLITRQIMTM 433          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A8J7F0J9_9CYAN (Tyrosine transporter n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F0J9_9CYAN)

HSP 1 Score: 198 bits (503), Expect = 6.460e-55
Identity = 140/407 (34.40%), Postives = 207/407 (50.86%), Query Frame = 1
Query:  169 KLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGNGRE-------SIQEMAEASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPLV-----FTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSL--MIECTHLLKAVASRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQ--FPGGTAALAFVAAI 1335
            +L    G ++ ++ L+AG  VGAG+LALP VT   G L S+A ++ VW Y + SA+++AE + NG          +  M E+S+G     +    +L  +Y L++AY+SQG  +L                  + D+H  P       F ++ G    LG  RF E  N+  V ++I SF GLL  G   I  TSL L+ D S+LP  L V + AL F N++P V+  L+GD  K+  S+ +GS IPL+ ++LWNAV+LG++      +I   S+ I  P+ +L  G     LG LI+VFS  AI TSF G  + L  + +  +L     +       L+L PP   S   P+ F TAL+Y GT+    L G+ PA +A++ R       Q   PGG   L  +  I
Sbjct:   25 RLIHKSGSVVGSTLLIAGTTVGAGILALPTVTLPSGVLPSTALLIGVWLYTVVSALLIAEVSLNGMRYNGRASNGLLAMVESSLGTIGTRIAGGAYLFLHYALLIAYVSQGGEILISA------------VEKIWDLHYVPAWIGSTGFALIFGSILYLGKDRFVERLNSFFVAIVIASFIGLLLLGATQIHPTSL-LSQDWSALPPALSVMLVALFFHNIIPVVATQLEGDAAKVRQSIVVGSAIPLVMFVLWNAVILGSVTPAMLQNISGDSS-IFDPLQILRAGDAGQWLGILITVFSEFAIATSFIGFFYGLRDLFQDMNLFADTPNVSLPLISLILFPPMGFSAINPNIFFTALDYAGTFSVSILGGIIPAVIAWKQRDKYKELNQSLVPGGKLVLVVMIGI 417          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A2K8SHR6_9NOSO (TyrP, tyrosine-specific transport protein n=7 Tax=Nostoc TaxID=1177 RepID=A0A2K8SHR6_9NOSO)

HSP 1 Score: 198 bits (503), Expect = 8.390e-55
Identity = 157/414 (37.92%), Postives = 215/414 (51.93%), Query Frame = 1
Query:  166 EKLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGN-----GRESIQEMA--EASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGG--IDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKAVA--------SRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQF-----PGGTAALAFVAAI 1335
            +KL    G ++ ++AL+AG  VGAG+LALP VT   G + S++ ++AVW Y L S ++VAE   N     G  SI  +A  E  +G+  G L    +L  +Y L+VAYI+QG  +L         V    L + VG        FT+L G    LG  +F E  N+A VG++I+SF GLL     HI  T L L  + S+L S + V   AL FQNVVP V   L+GD  KI  S+ IGS IPLI ++ WNAV+LG+I    +D +S G S   +  P+ VL  G     LG L+S+FS  AI TSF G  + L+     LLK +         SR P  + L L PP T+    P  F TAL+Y GT+    L G+ PA M+++ R    +         PGG   L  +  +
Sbjct:   26 KKLNHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGIVPSTSGLIAVWLYALVSGLLVAEVTLNTIRTEGHPSIGFLAVVEKILGKVGGRLAGGAYLFMHYALLVAYIAQGGEILGSATAKIWSV--QILPTWVGTT-----TFTLLFGGIMYLGREKFIEKLNSAFVGIVIVSFLGLLLLAGGHIQSTQL-LFQNWSTLGSAISVMSVALFFQNVVPLVVTQLEGDARKIRQSIFIGSVIPLIMFLAWNAVILGSISPEMLDGTSNGRS---VFDPLQVLRAGGAGEWLGVLVSIFSEFAIATSFIGFVYGLL----DLLKDIFLIAQGKLFSRLPLYS-LALFPPMTLGTLNPSIFFTALDYTGTFGISVLGGIIPALMSWKQRQEQKNSDSINQPLVPGGKVTLIVMLGV 423          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A8J7BZI2_9CYAN (Tyrosine transporter n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J7BZI2_9CYAN)

HSP 1 Score: 196 bits (499), Expect = 2.540e-54
Identity = 140/420 (33.33%), Postives = 214/420 (50.95%), Query Frame = 1
Query:  166 EKLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECA-------GNGRESIQEMAEASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPL-----VFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKAV--ASRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQ---FPGGTAALAF---VAAITCGYMLWQ 1359
            +KL    G ++ ++AL+AG  VGAG+LALP VT   G + S+A ++AVW Y L SA+++ E         G+    +  M E+++ +    +    +L  +Y L+VAYI+QG  +L           G  +    G  +  P+      FT+L G    LG  +  E  N+A V ++I+SF GLL     HI  +   +  + S+LP  + V   AL F N++P V+  L+GD  KI +S+ IGS IPLI ++ WNAV+LG++       IG +   +  P+  L  G    +LG L+SVFS  AI TSF G  + L+     +  A    SR      L+L PP ++S   P  F+TAL+Y GT+    L G+ PA + ++ R + + +I+    PGG   L     VA    G  +W 
Sbjct:   20 DKLSHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGVVPSTALLIAVWLYALVSALLLVEVTLNTMRFGGSSSNGLLVMVESTLSKPIARITGGAYLFYHYTLLVAYIAQGGEIL-----------GSAVEKVAGVQNDLPVWVGTTTFTLLFGGIMYLGREKLVEKLNSAFVAIVIVSFIGLLLLAGTHIHPSQFSVQ-NWSALPPAVSVMFVALFFHNIIPVVTVQLEGDVRKIRSSIIIGSVIPLIMFLAWNAVILGSVSPDTIQGIGGA---VFDPLQALRNGGAGELLGVLVSVFSEFAIATSFIGFVYGLLDFFKDISPAPNQLSRRLPLFSLILFPPLSLSTLNPGIFLTALDYAGTFSSSILAGIIPALICWKQRQLYSGRIEQTLVPGGKLTLVVMIGVALAVIGRQIWS 424          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: UPI0016835787 (tyrosine transporter n=2 Tax=Nostoc TaxID=1177 RepID=UPI0016835787)

HSP 1 Score: 196 bits (499), Expect = 3.070e-54
Identity = 144/414 (34.78%), Postives = 214/414 (51.69%), Query Frame = 1
Query:  187 GGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGN-----GRESIQ--EMAEASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFGP--FLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGGIDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKAVASRGPTAAM-------LVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQF-PGGTAALAFVAAITCGYMLWQTIMM 1371
            G ++ ++AL+AG  VGAG+LALP VT   G       ++AVW Y L S +++AE + N     GR SI    M E ++G++   +    +L  +Y L+VAYI+QG  +L       S V+G    L S VG +      FT+L G    +G  +  E  N A VG+++ SF GLL  GI  +      L  D ++L + +PV + AL + NVVP V   L+GD  KI  S+ IGS IPLI ++ WNAV+LG++       + + S  +  P+ VL  G     LG L+S+FS  AI TSF G  + L+     L K ++    T          L+LLPP ++    P+ F+TAL++ GT+    L G+ PA   ++ R    H  +  PGG   L  +  +  G +L Q I +
Sbjct:   34 GSVLGSTALIAGTTVGAGILALPAVTLPSGXXXXXVLLIAVWLYALISGLLIAEVSINTMRLAGRPSIGLLAMVENTLGQAGARIFGGAYLFLHYALLVAYITQGGDILVSAV---SHVWGMQNILPSWVGTV-----AFTLLFGGIMYVGREKLIEKLNNAFVGIVLASFLGLLFLGITQVKTVHF-LFQDWNALGTAIPVMLVALFYHNVVPVVVTQLEGDSRKIRQSITIGSAIPLIMFLAWNAVILGSV---SPDILKAGSQAVFDPLQVLRAGGGGQWLGVLVSIFSEFAIATSFIGFVYGLL----DLFKDISPNTQTQTANRLPLYSLILLPPMSLGAINPNIFLTALDFAGTFSISILGGIIPALATWKQRQQLQHTNRLVPGGKLTLIIMIGVALGLILKQIIFL 431          
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Match: A0A2D0HMX3_9NOSO (Tyrosine transporter n=16 Tax=Nostocales TaxID=1161 RepID=A0A2D0HMX3_9NOSO)

HSP 1 Score: 196 bits (499), Expect = 3.210e-54
Identity = 149/416 (35.82%), Postives = 222/416 (53.37%), Query Frame = 1
Query:  166 EKLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAMVAVWGYCLSSAIIVAECAGN-----GRESIQEMA--EASVGRSAGILMCATFLASNYLLMVAYISQGASLLSGLPVPSSDVFG-PFLASCVGDIHQAPLVFTVLVGCTSLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLPSMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNAVVLGNIGG--IDNSSIGSSSAGIASPMDVL--GATSPVLGALISVFSMSAIVTSFWGASFSLMIECTHLLKA----VASRGPTAAMLVLLPPTTVSMACPDSFVTALEYVGTYVDPFLYGVAPAFMAYRLR-----GVGNHKIQFPGGTAALAFVAAITCGYM 1350
            +KL    G ++ ++AL+AG  VGAG+LALP VT   G + S++ ++AVW Y L S ++VAE   N     G  SI  +   E  +G+    +    +L  +Y L+VAYI++G  +L    V ++ ++G   L + VG      + FT+L G    LG  +F E  N+A VG++I+SF GLL  G  HI    L L  + S+L S + V   AL FQNVVP V   L+GD  KI  S+ IGS IPLI ++ WN V+LG++    + ++S G+S   +  P+ +L  G     LG L+S+FS  AI TSF G  + L+     +  +    ++SR P  + LVL PP T+    P  F TAL+Y GT+    L G+ PA M+++ R         ++   PGG   L  +  +    M
Sbjct:   26 KKLNHQPGSVLGSTALIAGTTVGAGILALPAVTLPSGIVPSTSGLIAVWLYALVSGLLVAEVTLNTMRTEGLSSIGFLGVVEKILGKVGARIAGGAYLFMHYALLVAYITEGGEILG---VAAAKIWGMQILPTWVGT-----MAFTLLFGGIMYLGREKFIEKLNSAFVGIVIVSFLGLLFLGGRHIQSAQL-LFQNWSALGSAISVMSVALFFQNVVPLVVTQLEGDARKIRQSIFIGSVIPLIMFLAWNTVILGSVSPDMLHSTSDGTS---VFDPLQILRAGGAGQWLGVLVSIFSEFAIATSFIGFVYGLLDLFKDIFLSSQGKLSSRLPLYS-LVLFPPMTLGTLNPSIFFTALDYTGTFSISILGGIIPALMSWKQRQEQENSNSTNQPLVPGGKVTLIAIVGVALAMM 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47604.11896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW44_ECTSI6.580e-17658.47Aromatic amino acid permease n=2 Tax=Ectocarpus Ta... [more]
A0A836CN59_9STRA1.600e-6837.25Tryptophan/tyrosine permease family-domain-contain... [more]
A0A5B8MJA0_9CHLO2.650e-5835.66Tyrosine-specific transport protein n=1 Tax=Chloro... [more]
A0A2Z6CRZ0_9NOSO3.460e-5536.25Aromatic amino acid permease n=5 Tax=Nostocales Ta... [more]
K9WZ78_9NOST3.990e-5535.46Amino acid permease n=2 Tax=Cylindrospermum TaxID=... [more]
A0A8J7F0J9_9CYAN6.460e-5534.40Tyrosine transporter n=2 Tax=Cyanobacteria TaxID=1... [more]
A0A2K8SHR6_9NOSO8.390e-5537.92TyrP, tyrosine-specific transport protein n=7 Tax=... [more]
A0A8J7BZI2_9CYAN2.540e-5433.33Tyrosine transporter n=1 Tax=Iningainema tapete BL... [more]
UPI00168357873.070e-5434.78tyrosine transporter n=2 Tax=Nostoc TaxID=1177 Rep... [more]
A0A2D0HMX3_9NOSO3.210e-5435.82Tyrosine transporter n=16 Tax=Nostocales TaxID=116... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47604contigH-elongata_contig47604:1930..3875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score508.1
Seed ortholog evalue4.4e-141
Seed eggNOG ortholog2880.D7FW44
EggNOG free text desc.Tryptophan/tyrosine permease family
EggNOG OGs2QSPD@2759,COG0814@1
COG Functional cat.E
BiGG ReactioniEC55989_1330.EC55989_3581,iECO103_1326.ECO103_3910,iECO111_1330.ECO111_3985,iECO26_1355.ECO26_4267,iECSE_1348.ECSE_3447,iEcE24377_1341.EcE24377A_3643,iSSON_1240.SSON_3307
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTryptophan/tyrosine permease
Ec32 orthologEc-01_003320.1
Exons4
Model size1384
Cds size1383
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47604.11896.1prot_H-elongata_contig47604.11896.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47604 1930..3875 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930786.905094-CDS-H-elongata_contig47604:1929..21541622930786.905094-CDS-H-elongata_contig47604:1929..2154Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 1930..2154 +
1691679569.9306045-CDS-H-elongata_contig47604:1929..21541691679569.9306045-CDS-H-elongata_contig47604:1929..2154Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 1930..2154 +
1622930786.9183211-CDS-H-elongata_contig47604:2480..31381622930786.9183211-CDS-H-elongata_contig47604:2480..3138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 2481..3138 +
1691679569.951294-CDS-H-elongata_contig47604:2480..31381691679569.951294-CDS-H-elongata_contig47604:2480..3138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 2481..3138 +
1622930786.9322522-CDS-H-elongata_contig47604:3288..35281622930786.9322522-CDS-H-elongata_contig47604:3288..3528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 3289..3528 +
1691679569.9626458-CDS-H-elongata_contig47604:3288..35281691679569.9626458-CDS-H-elongata_contig47604:3288..3528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 3289..3528 +
1622930786.9466786-CDS-H-elongata_contig47604:3615..38751622930786.9466786-CDS-H-elongata_contig47604:3615..3875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 3616..3875 +
1691679569.971906-CDS-H-elongata_contig47604:3615..38751691679569.971906-CDS-H-elongata_contig47604:3615..3875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47604 3616..3875 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47604.11896.1

>prot_H-elongata_contig47604.11896.1 ID=prot_H-elongata_contig47604.11896.1|Name=mRNA_H-elongata_contig47604.11896.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp
GSQLPLSRLLSLRAQRSDAFSLASTVPGTQDSTPFIGIGIAYNTDTDTDT
DTDTDEKLEEDGGGIITNSALVAGNMVGAGVLALPRVTEAPGFLLSSAAM
VAVWGYCLSSAIIVAECAGNGRESIQEMAEASVGRSAGILMCATFLASNY
LLMVAYISQGASLLSGLPVPSSDVFGPFLASCVGDIHQAPLVFTVLVGCT
SLLGPARFAESANTALVGMIILSFTGLLATGIPHIDVTSLGLTPDASSLP
SMLPVAVCALTFQNVVPAVSKNLDGDPIKIWASLAIGSGIPLITYILWNA
VVLGNIGGIDNSSIGSSSAGIASPMDVLGATSPVLGALISVFSMSAIVTS
FWGASFSLMIECTHLLKAVASRGPTAAMLVLLPPTTVSMACPDSFVTALE
YVGTYVDPFLYGVAPAFMAYRLRGVGNHKIQFPGGTAALAFVAAITCGYM
LWQTIMMNNI*
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mRNA from alignment at H-elongata_contig47604:1930..3875+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47604.11896.1 ID=mRNA_H-elongata_contig47604.11896.1|Name=mRNA_H-elongata_contig47604.11896.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1946bp|location=Sequence derived from alignment at H-elongata_contig47604:1930..3875+ (Himanthalia elongata Himel1 dioecious)
GGGTCACAGCTTCCATTATCACGGCTGCTGAGCCTTCGTGCTCAGAGAAG CGATGCCTTTTCGCTGGCGAGCACGGTACCTGGTACACAAGATTCAACAC CATTTATCGGTATCGGTATCGCTTACAACACCGATACCGATACCGATACC GATACCGATACCGATGAAAAACTGGAGGAAGATGGAGGGGGCATTATAAC CAACTCGGCTTTGGTGGCTGGCAATGTGAGTACAGGATGATTACAGCCAG TAAGCATTAAAGACCAGGGTCGGGTTAGTGATGTCGATGTTTTTAGTTTA CGCAGTACAGTACAGCACAGCACTTACAATAAACAACACAAAAATATCTC ACTTTTTCATCAAGGCAAGGTAATCGATTGCTTTTCTTCCCGGTATTGAA TTAATTATTATACGACAGCTGCAGCCGCGCGAGACCTCCTTTGGCATGTA CCGTCACTGATCCAGCCTTTCAAGCCGTGGATAAAGCATCTGGGGAAAAC TGACGTTAATATTGTAAATTGCTGCTGATTTCCTCTCTTTTACGGCTGTA GATGGTTGGAGCAGGTGTCCTCGCCCTGCCACGCGTTACGGAGGCGCCAG GCTTTCTCCTGAGCTCAGCAGCAATGGTGGCTGTGTGGGGGTATTGCCTC TCGTCCGCCATAATCGTTGCGGAATGCGCAGGGAATGGTCGCGAGTCTAT TCAAGAAATGGCTGAAGCATCAGTTGGTCGCAGTGCAGGGATTTTGATGT GCGCTACATTTTTGGCGAGCAACTACCTACTGATGGTAGCTTACATCAGC CAGGGTGCATCGCTCCTGTCTGGTCTACCCGTGCCGTCTTCAGACGTGTT TGGCCCGTTTTTGGCGAGCTGTGTGGGAGATATACACCAGGCGCCGCTGG TATTTACGGTTCTGGTCGGTTGCACTTCTCTGTTGGGTCCTGCTCGCTTT GCGGAGAGCGCAAACACAGCGCTGGTTGGTATGATAATTTTGTCATTTAC CGGTCTGTTGGCAACAGGAATACCCCACATTGATGTGACGTCCCTGGGGC TTACGCCGGATGCGTCTTCCTTGCCATCGATGTTGCCAGTGGCAGTCTGC GCACTAACCTTCCAGAATGTGGTGCCCGCAGTCTCGAAGAATCTCGACGG CGACCCCATTAAAATATGGGCATCGCTCGCCATCGGCTCTGGAATACCGC TCATCACATGTGAGCACGCGAAAGGCGTACATAGTGTTCGTGCGATGCAC TTGTTGACCTTGATACCTCAGTGAACACACCAGATAATTATCTATCCAAC CTCCCGAACTCCTCATGTGCCTGCCTCTCTGCGTTTCGTTCGTACTTTGC TCGATTCAGATATCCTCTGGAATGCTGTCGTGCTTGGAAACATTGGAGGT ATTGACAATAGCTCTATCGGCAGCTCCTCGGCTGGGATAGCGTCTCCCAT GGATGTTCTGGGAGCTACTTCCCCTGTGTTGGGAGCGCTGATCTCTGTAT TTAGCATGTCCGCGATAGTCACTTCATTTTGGGGGGCTTCGTTCTCTCTG ATGATCGAGTGCACTCACTTGTTAAAAGCCGTCGCGTCGCGCGGTCCCAG TTGGGACCCCAAATGGAAGCTCCCCATGGGGGTCGACGGGCGTTCGATCG ACGAGGGGTCCCGCCATGACGGGAAAGTAAAGACAGCCGCGGCCATGCTC GTCCTGTTGCCACCGACAACTGTAAGTATGGCCTGCCCTGACTCTTTCGT CACGGCCTTGGAGTATGTAGGGACATACGTCGATCCGTTTTTGTACGGAG TCGCGCCCGCGTTTATGGCATACCGTCTACGCGGTGTAGGTAACCATAAG ATTCAGTTTCCTGGCGGTACTGCCGCACTTGCCTTCGTAGCAGCGATCAC CTGCGGGTATATGTTGTGGCAGACTATAATGATGAATAATATCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig47604:1930..3875+

>mRNA_H-elongata_contig47604.11896.1 ID=mRNA_H-elongata_contig47604.11896.1|Name=mRNA_H-elongata_contig47604.11896.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2766bp|location=Sequence derived from alignment at H-elongata_contig47604:1930..3875+ (Himanthalia elongata Himel1 dioecious)
GGGTCACAGCTTCCATTATCACGGCTGCTGAGCCTTCGTGCTCAGAGAAG
CGATGCCTTTTCGCTGGCGAGCACGGTACCTGGTACACAAGATTCAACAC
CATTTATCGGTATCGGTATCGCTTACAACACCGATACCGATACCGATACC
GATACCGATACCGATGAAAAACTGGAGGAAGATGGAGGGGGCATTATAAC
CAACTCGGCTTTGGTGGCTGGCAATGGGTCACAGCTTCCATTATCACGGC
TGCTGAGCCTTCGTGCTCAGAGAAGCGATGCCTTTTCGCTGGCGAGCACG
GTACCTGGTACACAAGATTCAACACCATTTATCGGTATCGGTATCGCTTA
CAACACCGATACCGATACCGATACCGATACCGATACCGATGAAAAACTGG
AGGAAGATGGAGGGGGCATTATAACCAACTCGGCTTTGGTGGCTGGCAAT
ATGGTTGGAGCAGGTGTCCTCGCCCTGCCACGCGTTACGGAGGCGCCAGG
CTTTCTCCTGAGCTCAGCAGCAATGGTGGCTGTGTGGGGGTATTGCCTCT
CGTCCGCCATAATCGTTGCGGAATGCGCAGGGAATGGTCGCGAGTCTATT
CAAGAAATGGCTGAAGCATCAGTTGGTCGCAGTGCAGGGATTTTGATGTG
CGCTACATTTTTGGCGAGCAACTACCTACTGATGGTAGCTTACATCAGCC
AGGGTGCATCGCTCCTGTCTGGTCTACCCGTGCCGTCTTCAGACGTGTTT
GGCCCGTTTTTGGCGAGCTGTGTGGGAGATATACACCAGGCGCCGCTGGT
ATTTACGGTTCTGGTCGGTTGCACTTCTCTGTTGGGTCCTGCTCGCTTTG
CGGAGAGCGCAAACACAGCGCTGGTTGGTATGATAATTTTGTCATTTACC
GGTCTGTTGGCAACAGGAATACCCCACATTGATGTGACGTCCCTGGGGCT
TACGCCGGATGCGTCTTCCTTGCCATCGATGTTGCCAGTGGCAGTCTGCG
CACTAACCTTCCAGAATGTGGTGCCCGCAGTCTCGAAGAATCTCGACGGC
GACCCCATTAAAATATGGGCATCGCTCGCCATCGGCTCTGGAATACCGCT
CATCACATATGGTTGGAGCAGGTGTCCTCGCCCTGCCACGCGTTACGGAG
GCGCCAGGCTTTCTCCTGAGCTCAGCAGCAATGGTGGCTGTGTGGGGGTA
TTGCCTCTCGTCCGCCATAATCGTTGCGGAATGCGCAGGGAATGGTCGCG
AGTCTATTCAAGAAATGGCTGAAGCATCAGTTGGTCGCAGTGCAGGGATT
TTGATGTGCGCTACATTTTTGGCGAGCAACTACCTACTGATGGTAGCTTA
CATCAGCCAGGGTGCATCGCTCCTGTCTGGTCTACCCGTGCCGTCTTCAG
ACGTGTTTGGCCCGTTTTTGGCGAGCTGTGTGGGAGATATACACCAGGCG
CCGCTGGTATTTACGGTTCTGGTCGGTTGCACTTCTCTGTTGGGTCCTGC
TCGCTTTGCGGAGAGCGCAAACACAGCGCTGGTTGGTATGATAATTTTGT
CATTTACCGGTCTGTTGGCAACAGGAATACCCCACATTGATGTGACGTCC
CTGGGGCTTACGCCGGATGCGTCTTCCTTGCCATCGATGTTGCCAGTGGC
AGTCTGCGCACTAACCTTCCAGAATGTGGTGCCCGCAGTCTCGAAGAATC
TCGACGGCGACCCCATTAAAATATGGGCATCGCTCGCCATCGGCTCTGGA
ATACCGCTCATCACATATATCCTCTGGAATGCTGTCGTGCTTGGAAACAT
TGGAGGTATTGACAATAGCTCTATCGGCAGCTCCTCGGCTGGGATAGCGT
CTCCCATGGATGTTCTGGGAGCTACTTCCCCTGTGTTGGGAGCGCTGATC
TCTGTATTTAGCATGTCCGCGATAGTCACTTCATTTTGGGGGGCTTCGTT
CTCTCTGATGATCGAGTGCACTCACTTGTTAAAAGCCGTCGCGTCGCGCG
GTCCCAATATCCTCTGGAATGCTGTCGTGCTTGGAAACATTGGAGGTATT
GACAATAGCTCTATCGGCAGCTCCTCGGCTGGGATAGCGTCTCCCATGGA
TGTTCTGGGAGCTACTTCCCCTGTGTTGGGAGCGCTGATCTCTGTATTTA
GCATGTCCGCGATAGTCACTTCATTTTGGGGGGCTTCGTTCTCTCTGATG
ATCGAGTGCACTCACTTGTTAAAAGCCGTCGCGTCGCGCGGTCCCACCGC
GGCCATGCTCGTCCTGTTGCCACCGACAACTGTAAGTATGGCCTGCCCTG
ACTCTTTCGTCACGGCCTTGGAGTATGTAGGGACATACGTCGATCCGTTT
TTGTACGGAGTCGCGCCCGCGTTTATGGCATACCGTCTACGCGGTGTAGG
TAACCATAAGATTCAGTTTCCTGGCGGTACTGCCGCACTTGCCTTCGTAG
CAGCGATCACCTGCGGGTATATGTTGTGGCAGACTATAATGATGAATAAT
ATCTGACCGCGGCCATGCTCGTCCTGTTGCCACCGACAACTGTAAGTATG
GCCTGCCCTGACTCTTTCGTCACGGCCTTGGAGTATGTAGGGACATACGT
CGATCCGTTTTTGTACGGAGTCGCGCCCGCGTTTATGGCATACCGTCTAC
GCGGTGTAGGTAACCATAAGATTCAGTTTCCTGGCGGTACTGCCGCACTT
GCCTTCGTAGCAGCGATCACCTGCGGGTATATGTTGTGGCAGACTATAAT
GATGAATAATATCTGA
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