mRNA_H-elongata_contig47591.11894.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 281 bits (718), Expect = 2.950e-84 Identity = 165/483 (34.16%), Postives = 271/483 (56.11%), Query Frame = 1
Query: 16 ATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILH--GIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFP--IDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
A++ EA S+EWP+WK AI +EM + G + +VE K ++G++ VF+ K + + IE YK LVA+ F QV I + E+ +P + SI ++L++ A WE Q+DV A L D+EEEIY++ P + K+ V LK+ +YG+ EL + G RS+ D CVF W+ + ++++ I + VDD + + TK R++ + F + DLGE + L + RDR+ TL QH YI + RF + A S+ P G LS P T + ++M+ IPYRE++G+L++AA TRPDI++ L++F NPG H A++V +YL TR+ +T+G G + + DAD+G+ + R S+SG ++ G A+SW ++ Q V A++S+E+EY+A+ E +L + + P + +++H DN+ I +AK+ RT+H+DI++H + +
Sbjct: 113 ASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTI-AGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADWGS-AEHRHSISGYVFLLDGSAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHPDILRYPVRLHSDNKSVIALAKDDAYHARTKHIDIRFHFIHKTV 590
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 290 bits (743), Expect = 1.570e-83 Identity = 168/483 (34.78%), Postives = 274/483 (56.73%), Query Frame = 1
Query: 4 DPESATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYG-----------VYGIELEAKGFQRSQADPCVF-RWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
D T +A S+E +W +A+ E+ G W +V R G R +G R VF +K ++ GR+ +YK LVAK F+Q + + E+ SP + SIR+VLS++ A + QLD + A L +D++E++++E+P ++ + L KA+YG ++ + ++ GF AD CV+ + V V + YVDD+++ + T ++ ++ L S F +K+LGE + L I DR A TL Q +YI V RF A ++V P G L+K SP T+AE ++MR PYR ++G LL+ T TRPD+++ QL++F +NPG H A +VL+YL T++ GI Y G + A+ DAD+G+ D RRSVSG +M+ G + + S+ Q+ A++S+E+EY+AL+ E+ + R + + + A ++ EDN+G I +A N + RT+HVDI++H +R+ +
Sbjct: 834 DDAPTTYQQAMKSNEASKWIKAMNSELKAHADNGSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKI-GFHSCGADQCVYVKGTKDNYVYVCL--YVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMKLTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVAMEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRTMLKDLGHEQVGATQVWEDNQGAIALASNAGYNARTKHVDIRHHFIRENV 1313
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 291 bits (744), Expect = 1.590e-83 Identity = 171/483 (35.40%), Postives = 276/483 (57.14%), Query Frame = 1
Query: 16 ATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILH--GIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFP--IDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
A++ EA S+EWP+WK AIA+EM + G + +VE K ++G++ VF+ K + +G IE YK LVA+ F QV I + E+ +P + SIR++L++ A WE Q+DV A L D+EEEIY+ P + K+ V LK+ +YG+ EL + G RS+ D CVF W+ + ++++ I + VDD + + TK R++ + F + DLGE + L + RDR+A TL Q YI + RF + A S+ P G LS P T + ++M+ IPYRE +G+L++AA TRPDI++ L++F NPG H A++V +YL TR+ +T+G G + + DAD+G+ + R S+SG ++ GGA+SW ++ Q V A++S+E+EY+A+ E +LR + + P + +++H DN+ I +AK+ RT+H+DI++H +R+ +
Sbjct: 923 ASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTI-AGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADWGS-AEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETV 1400
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 289 bits (740), Expect = 7.060e-83 Identity = 177/486 (36.42%), Postives = 267/486 (54.94%), Query Frame = 1
Query: 19 TIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQV--KSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKAS-IVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQV------KEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
T+ EA+ S +WPQW+RAI E D V+ +VE ++G+++VF+ K D +G + +K LVA+ F QV + H +E+ +P S SIR +LS+ A WE RQ+DV A L +EE +Y+ LP + + V LKK +YG+ +E GF R AD VF + G + + VDDL +T + + AV D+ F + DLG+ + L + RDR A T+ Q YI T+ RF + +A+ + +P G L SP T + ++MR +PYRE VG+L++AA TRPDI+F L++F NPG H ++VL+YL +R+L + YG G L + DAD+G+ + R S+SG + GGAISW S+ Q V A++S+E+EY+AL E +LR V E TFP+ ++H DN I +AK+ RT+H+DI++H +R+A+
Sbjct: 1030 TLEEARQSPDWPQWQRAIDAEYDNLRRHDVFDLVEPPPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVF-YKREGESAIIVAASVDDLTITGTSDLVDAFAV-DIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEG--LRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPV----RLHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAV 1507
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 274 bits (701), Expect = 4.110e-82 Identity = 176/491 (35.85%), Postives = 270/491 (54.99%), Query Frame = 1
Query: 19 TIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRD---------SRKQVGLLKKAMYGVYGIE----------LEAKGFQRSQADPCVF-RWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKASIVL-PTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITY----GWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQV-KEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
T EA + +WK+AIA E+ W++V + +R +G R VF K ++ G++ +YK LVAK + Q I YEE+ SP + S+R +L+ A G E Q DV+ A L ++EEEIY+ELPE R+ V +L +++YG+ L++ GF+ + ADPCV+ R G +V + YVDD+L+ S K + F IKDLG A + + I D TL Q Y +++ ++FG A L P G L+K+D PQT+ + +M+ PYR +VG+L++ A TRPDIS +L++F +NPG H KV++YL +T+D+GI Y G +P A+ DAD+ D RRSVSG +M+ G + W S QK A++S+E+EY+AL+ V E ++R++ KE + A + I+EDN+G + +AKN RT+H+DI+YH +R+ +
Sbjct: 68 TYAEATTRHDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRGEGEGECIVCL--YVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQPE-----AYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATV-IYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKV 550
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A8H7NVE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVE6_9APHY) HSP 1 Score: 273 bits (697), Expect = 3.290e-80 Identity = 173/484 (35.74%), Postives = 272/484 (56.20%), Query Frame = 1
Query: 1 LDPESATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGVYGI---------EL-EAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
++ + T EA A E W+ A+ E+ A G +++VE+ KG V+G V ++K D++ + K+K L A+ F QV + Y+++++PT+ S+R+VL++ AA WE Q+D A L D++E IY+ P + ++ + L KA+YG+ EL + G RS D VF L GI+++ IV++VDD + + TKR + + L + F I DLGEA + L I R+R T+ Q YI TV +RF +T A ++ +P L + TD E EM + PY +VG+L++AA TRPDI+F LA+F NP P H A++VL+YL TRDL +T+G G L + DAD+ + P R S+SG + GAI+W SR Q + A++S+E+EY+A + EL +LR + +T A+I + DN+ I +AKN + RT+H+D++YH +R+ +
Sbjct: 216 MNGDEPTYREAMAGPESEDWRVAMEEELAKIEAMGTYELVEKPKGANVVGCVWVLRKKRDENNEVAKFKARLCAQGFSQVHGVDYDQTAAPTARLASLRLVLALAAANDWEVHQIDFKNAYLNGDLDETIYMRQPPGFEVPGREDWIWRLLKALYGLKQAGRLWYQKICELFDEIGLSRSCHDFGVFFLFLPGIIII-IVIHVDDCTLVTNTKRIMDDLKKQLGARFEIVDLGEARWLLGFEIHRNRATRTISLSQASYIDTVLDRFHMTDAYTLTIPMDPHVTLHGLEL--TDDERREMARKPYARLVGSLMYAAIGTRPDIAFAVSTLAQFMANPAPVHWEAAKRVLRYLKGTRDLRLTFGLSTDG--LTGYSDADWASQPH-RHSISGHVFLFTSGAITWSSRKQPIIALSSTEAEYIAASDTTRELLWLRALFAELTSSSPASIPLFSDNQSAITIAKNGLLNARTKHIDLRYHFIREVL 693
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 274 bits (701), Expect = 1.470e-79 Identity = 169/492 (34.35%), Postives = 266/492 (54.07%), Query Frame = 1
Query: 10 ESATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYG-----------VYGIELEAKGFQRSQADPCVF-RWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKAS-IVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGG-----------KLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
E T+ EAQA+ EWP+WKRA+ E+ G + + G++ +G R V++ K D DGRI +YK LVA+ F Q + Y E+ +P S+R++L++ A E Q DV A L AD++EEIY+ P Y + + L+KA+YG + + GFQR +DPCV+ + G+ +V + +VDD+ + T + L + I DLG L I+RDR TL Q QYIQTV +RF + + + P L K DA++ EM+ +PY+ ++G+L++AA TRPDIS+ + L++++ PG TH A++VL+YL T+D GI Y G G +L + DAD+G PD RRS+SG A ++ G I+W S+ Q A++S E+EY+A+A ++R + +TF A K++ DN+ I ++K+ R++ +DI++H +R+ I
Sbjct: 14 EPRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLKKSPKGLTIVGM--HVDDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGFEISRDRKKRTLSIKQSQYIQTVLDRFKMADCNPVTTPLDPNVKLCKEPE---DADLSEMKGVPYQALIGSLMYAALGTRPDISYAVQALSQYSARPGITHWTAAKRVLRYLKGTQDFGILYS---GKGETRIRAYYDNFRLEGYSDADWGANPDDRRSISGYAYLVGNGIIAWSSKKQTTVALSSMEAEYMAIAYAARHAIWVRAILAELTFTQPRATKLNADNQSAIALSKDTVQHARSKXIDIRHHFIRECI 497
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A182HDZ7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HDZ7_AEDAL) HSP 1 Score: 265 bits (678), Expect = 1.990e-79 Identity = 168/483 (34.78%), Postives = 261/483 (54.04%), Query Frame = 1
Query: 4 DPESATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAY--RDSRKQVGLLKKAMYG------VYGIELEAK----GFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKASIV-LPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
D + T EA + + +W A+ E D W + E KG+ + + V+K K D G++++YK LV K + Q K + Y+E+ SP +S+R + +M A + Q+D A L+ D+EEEIY+E P + R+ V L KA+YG V+ +L+A G +S+ DPC++ WI G V+ + VYVDD+L+ S + L S F +KDLG A L ITR + G++ DQ YI ++ RF + A V P + LSK SP T E + M+ IPY+E VG L++ A TRPDI FT L++FN GP H + + +YL T+ + + Y G KL+ + DAD+ + D RRS SG ++ GGA+SW + Q ++++ E+EY++L+ V E + R + F AI++ DN+ TI +A+N + RT+H+DI++H +RDA+
Sbjct: 14 DDDPVTHQEALSRDDSGRWTTAMKEEYDALINNNTWTLTELPKGRSAIKCKWVYKTKHDASGKVDRYKARLVIKGYSQRKGVDYDETYSPVVRHSSLRYLFAMAAKYNLQVDQMDAITAFLQGDIEEEIYMEQPPCFVKPGGRQLVCRLNKALYGLKQSSRVWNTKLDAALKKLGLHQSEFDPCLYYWIEDGKVLF-VAVYVDDVLIFSNDAALKNNLKAKLSSTFRMKDLGSAVSCLGIRITRAK--GSVSLDQEAYIDSMLRRFNMQDAKTVSTPMNTAEKLSKEMSPNTPEETERMKNIPYQEAVGCLMYLAQCTRPDILFTVNLLSRFNCCYGPKHWEAVKHLFRYLKGTKTIRLKYS-AAGDSKLVGYSDADWASDLDDRRSKSGYVFLLQGGAVSWCCKRQSTVSLSTCEAEYMSLSAAVQEASWWRGLVS--QFGETDAIELRCDNQSTICIARNGGYTPRTKHIDIRHHYIRDAL 490
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 278 bits (711), Expect = 3.030e-79 Identity = 165/475 (34.74%), Postives = 269/475 (56.63%), Query Frame = 1
Query: 19 TIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELP--EAYRDSRKQVGLLKKAMYGVYG----------IELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKASIV-LPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFPIDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVR 1404
+ EA+ +WP+W+ AI E+D A G W++V R V+ ++ V + K + G I+KYK LVA+ F QV + Y ++ +P + +SIR++L++ A GW A D N A L + ++E++Y+E P A+ D + V L+KA+YG+ L GF R +AD VF + G ++ + V+VDD L+T +++R + + + + I DLG + L I+ D AGTL QH YI+ + RF T V +P + LSK+ P++ AEV MR++PYRE +GAL++AA TRPDI+F LA+F NPG H +++ +YL TR L + YG + +L +V+AD G + RR+++G ++ GGA+SW S+ Q++ ++++ESEYVA E +LR++ + P+ A ++ DN+ I + K+ RT+H+D++YH +R
Sbjct: 800 SYAEAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVF-YKHEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQR--ELEGYVNAD-GATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDVRYHFIR 1270
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI) HSP 1 Score: 265 bits (676), Expect = 4.140e-79 Identity = 162/486 (33.33%), Postives = 269/486 (55.35%), Query Frame = 1
Query: 1 LDPESATIGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYR--DSRKQVGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTK-ASIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH*MEAQKVLQYLWRTRDLGITYGWEPGGGKLLAWVDADYGTFPDTRRSVSGGAVMMAGGAISWFSRMQKVRAVASSESEYVALA*MVNELRFLRQVKEFMTFP--IDAAIKIHEDNEGTIKMAKNRFSSRRTRHVDIKYHIVRDAI 1413
L+ + ++ + + SS +W +A+ EM GVW +VE KG + +G + +FK K D G I +YK LVAK F Q + I Y+E+ SP S+ S R++++++A E Q+DV A L +++E IY+ PE + DS++ V LK+++YG+ + + + GF+ + D C++ G + +V+YVDD+L+ S+ + +R L S F +KDLG A + L I RDR+ G L Q YI V RFG++ A P A G S P+ + E +M + PY VG+L++A TRPDI++ L ++ NPG H +A++V++YL RT+D +TY +++A+ D+D+ D+RRS SG M+AGGA+SW S Q + A ++ E+E++A N +LR + I+ ++I+ DN+ +KN SS +++H+DIK+ +V++ +
Sbjct: 3 LEDDPISLSQVKQSSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVAYSDSDFAGCLDSRRSTSGCIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLRNFVTQLRIVDGIEKPLRINCDNKAAELYSKNNRSSSKSKHIDIKFLVVKERV 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47591.11894.1 >prot_H-elongata_contig47591.11894.1 ID=prot_H-elongata_contig47591.11894.1|Name=mRNA_H-elongata_contig47591.11894.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp MDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFback to top mRNA from alignment at H-elongata_contig47591:471..1913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47591.11894.1 ID=mRNA_H-elongata_contig47591.11894.1|Name=mRNA_H-elongata_contig47591.11894.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1443bp|location=Sequence derived from alignment at H-elongata_contig47591:471..1913- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47591:471..1913- >mRNA_H-elongata_contig47591.11894.1 ID=mRNA_H-elongata_contig47591.11894.1|Name=mRNA_H-elongata_contig47591.11894.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1812bp|location=Sequence derived from alignment at H-elongata_contig47591:471..1913- (Himanthalia elongata Himel1 dioecious)back to top |