mRNA_H-elongata_contig47565.11885.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47565.11885.1
Unique NamemRNA_H-elongata_contig47565.11885.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: D8LQF4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF4_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 7.540e-93
Identity = 214/526 (40.68%), Postives = 273/526 (51.90%), Query Frame = 1 
Query:    1 RLPKPAARTFGLMRIFPKAMEKIRRDQLEAYMQELLSIPEALTNRSVLSFLGLVSTSSHDLMLPVNPLHKKEATEVSPPTPSPRTIPTLSSPTRHSATRPGSEHRCAVFGGSRRPRDSAAHDDLYHAANSVGRDGRCGGPPPGPTG-------------ENE--------------------------LRKVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAFRKLNCPRPAEASSRLEAFARQAEGKVRSAGGMDMSFSFSRPRLNRVLTPGIL------SFSATASISTVKRYGAIPDSWLRSG-VGVKILRFHSAGFYLKK------------------NKKK*GEKRPEPQTLPALATPDPSRPHHPLRPRKGDASSTSPPSLQRGDSRQVP--HSYLCSQLVGAALTEMGLVRDGIGGRKGPWSWVLPVAFAQGGAVERGLADGVTLGEEVFVDGHEPEVATAILLGE 1380
            RLPKP  RTFG++R+FP+ ME++RRDQLE Y+QELLSIPEAL NR+VLSFLGLVS+S HDLM P NP   +   + +  +P+ R++   S+ + +   R  +  R A     RR + +A              D  C  PPP P G             ENE                          +RKVER++ LE     GD+ LFRCRG+LS  QRWV R++WDHVGVVV       L+LLEST  G+ R PLVERVR Y   GFA RVAFR+L CPRPAE+ +RLE F+RQ EGK     G+ + F+ S P+ +R  T          +F  T    +    G       R G  G++  R     F + K                  N    GE +    T  A+                    +T+ PS   G S + P   SYLCSQLVGAAL+EMG++R G  G+   W WV+P AF QGGAV+  LA GV LGEE+ VD HEPEVA A+LLG+
Sbjct:   77 RLPKPPMRTFGMLRLFPEKMERLRRDQLERYLQELLSIPEALANRAVLSFLGLVSSSRHDLMFPPNP--NRRGGQRAGKSPTLRSVAPHSTTSGNHTARGSTSRRMA---DCRRGQAAAGESXXXXXXXXXXXDMGCQSPPP-PKGNSDGGLGSARQATENERCREHPAVGTGREGEPRAAAGKEEEVVRKVERVNALEQEAHGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPSGRLDLLESTHGGVHRYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTY---GIVLPFTPSGPKGDRSRTKXXXXXXSSPAFQPTMPSESTDCGGGEHGDVARGGRAGLESRRGQGPAFAVAKEXXXXXXXXXXXXXXXXANAAGSGEGQRGSATADAIG------------------ETTTLPSFSSGKSEKTPLSASYLCSQLVGAALSEMGVLRGG--GKDLGWLWVVPGAFGQGGAVDSRLAAGVALGEEILVDAHEPEVAGAVLLGD 573
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: A0A6H5JAA8_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA8_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 8.800e-76
Identity = 205/547 (37.48%), Postives = 264/547 (48.26%), Query Frame = 1 
Query:    1 RLPKPAARTFGLMRIFPKAMEKIRRDQLEAYMQELLSIPEALTNRSVLSFLGLVSTSSHDLMLPVNPLHKKEATEVSPPT---PSPRTIPTLSSPTRHSATRPGSEHRCAVF---------------------------GGSRRPRDSA-----------AHDDLYHA----------------------------ANSVGRDGRCGGPPPGPTGENE--LRKVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAFRKLNCPRPAEASSRLEAFARQAEGKVRSAGGMDMSFSFSRPRLNRVLTPGILSFSATASI-------STVKRYGAIPDSWLRSGVGVKILRFHSAGFYLKKNKKK*---------GEKRPEPQTLPALATPDPSRPHHPLRPRKGDASSTSPPSLQRGDSRQ--VPHSYLCSQLVGAALTEMGLVRDGIGGRKGPWSWVLPVAFAQGGAVERGLADGVTLGEEVFVDGHEPEVATAILL 1374
            RLP P  RTFG++R+FP  ME++RR QLE Y+QELLSIPEAL NR+VLSFLGLVS+S HDLM P NP  +        PT    +P +I + +  T  + T  GS  R                               GG+   +  A           A++  YH+                            A  +GR+G     P    G+ E  +RKVER++ LE     GD+ LFRCRG+LS  QRWV R++WDHVGVVV       LELLEST  G+   PLVERVR Y   GFA  VAFR+L CPRPAE+ +RLE F+RQ EGK     G+ +  + S P+                ++       ST    G   D       G++  R     F + K +++          GE +    T  A+                    +T  P+   G S +  +  SYLCSQLVGAAL+EMG++R G  G+   W WV P AF QGGAV+  LA GV LGEE+ VD HEPEV  A+LL
Sbjct:  555 RLPAPPMRTFGMLRLFPVKMERLRRHQLERYLQELLSIPEALANRAVLSFLGLVSSSRHDLMFPPNPKCRGGQRAGKSPTLRAVAPHSIASETPTTSSNHTTRGSTGRRMADSLRGQAAAGESXXXXXXXXXXGVGECDGGATTGQREAGEGEATCFLPPANETAYHSPPPPHGNSDDGLGSARQATENERYREHPAVDMGREGE----PRAAAGQEEEVVRKVERVNALEQEAHGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVCGGPSARLELLESTHGGVHLYPLVERVRAYHDQGFASTVAFRRLRCPRPAESRARLEVFSRQVEGKTY---GIVLPCTPSGPKXXXXXXXXXXXXXXXXAVQPTMLRESTDSGRGERGDVARGGRAGLEGTRGQGPAFAVAKKEEEVVLCANAAGNGEGQRRSATANAIG------------------ETTKLPTFSSGTSEKTALSPSYLCSQLVGAALSEMGVLRGG--GKDLGWLWVAPGAFGQGGAVDSRLAAGVALGEEILVDAHEPEVVGAVLL 1074
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: A0A024GTB5_9STRA (PX domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTB5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.280e-13
Identity = 48/110 (43.64%), Postives = 64/110 (58.18%), Query Frame = 1 
Query:  466 ISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAFRKLNCPRPAEASSRLEAFARQAEGKVRS 795
            I  L+  +G GDI LF CR   S  QR V+RS +DHVG+V+P   G  L LLE+T  GI+  PL  R+  Y ++  + R+A R     R +E++ RL AF   AEGK  S
Sbjct:  523 IDALDKQIGYGDIVLFSCRFGSSICQRKVTRSRFDHVGIVIPGLRGDNLRLLEATGEGIKVYPLKARLMAYARE-VSERIAIRSFLVKRDSESAQRLMAFVASAEGKAYS 631
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: W2Q2W6_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q2W6_PHYPN)

HSP 1 Score: 70.1 bits (170), Expect = 7.660e-10
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1 
Query:  454 KVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAF---RKLNCPRPAEA--SSRLEAFARQAEG 783
            ++  +  LE     GD+ LF  R  +S  QR ++RSEWDHV +VVP   G  L+LLE+T +G+   PL  R+  Y     AF V +   RKL  P  + A  +  LE F  + EG
Sbjct:   60 QILHLQVLEFYTRPGDLILFNGRAKVSVLQRSITRSEWDHVAIVVPPSEGEYLQLLEATGDGVTLTPLTARLLAYS----AFHVRYFVLRKLRTPLLSRAVVNDLLERFTAEVEG 170
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: A0A2P4YQZ3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQZ3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.230e-9
Identity = 43/113 (38.05%), Postives = 60/113 (53.10%), Query Frame = 1 
Query:  451 RKVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAFRKLNCPRPAEA--SSRLEAFARQAEG 783
            R++  +  LE     GD+ LF  R   S  QR ++R+EWDHV +VVPA  G  L+LLE+T +G+   PL  R+  Y      + V  RKL  P  + A  +  LE F  + EG
Sbjct:  255 RQILHLQVLELYTRPGDLILFNGRAKASTLQRSMTRAEWDHVAIVVPAHEGGNLQLLEATGDGVTLTPLTARLLAYSTFHVRYFV-LRKLRTPLLSRAVVNDLLERFTAKVEG 366
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: V9EZL5_PHYPR (PX domain-containing protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=V9EZL5_PHYPR)

HSP 1 Score: 70.1 bits (170), Expect = 2.720e-9
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1 
Query:  454 KVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAF---RKLNCPRPAEA--SSRLEAFARQAEG 783
            ++  +  LE     GD+ LF  R  +S  QR ++RSEWDHV +VVP   G  L+LLE+T +G+   PL  R+  Y     AF V +   RKL  P  + A  +  LE F  + EG
Sbjct:  233 QILHLQVLEFYTRPGDLILFNGRAKVSVLQRSITRSEWDHVAIVVPPSEGEYLQLLEATGDGVTLTPLTARLLAYS----AFHVRYFVLRKLRTPLLSRAVVNDLLERFTAEVEG 343
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: A0A2P4YKI7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKI7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.590e-9
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 1 
Query:  451 RKVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLV 660
            R++  +  LE     GD+ LF  R   S  QR ++R+EWDHV +VVPA  G  L+LLE+T +G+   PLV
Sbjct:   33 RQILHLQVLEFYTRPGDLILFNGRAKASTLQRSMTRAEWDHVAIVVPAHEGGNLQLLEATGDGVTLTPLV 102
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: H3HC99_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3HC99_PHYRM)

HSP 1 Score: 65.5 bits (158), Expect = 1.590e-7
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 1 
Query:  496 GDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAFRKLNCPRPAEA--SSRLEAFARQAEGKVRSAG 801
            GD+ LF  R  +S  QR ++RSEWDHV +VVP+R    L+LLE+T +G+   PL  R+  Y      + V  RKL+ P  + A  +  LE FA +     +  G
Sbjct:   21 GDLILFNSRAKVSGIQRSMTRSEWDHVAIVVPSRDNSNLQLLEATGDGVTLTPLTARLLAYSTFHVRYFV-LRKLHTPLLSRAVVNDLLERFASEVAEAYQGLG 123
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BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Match: A0A2D4BXM9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXM9_PYTIN)

HSP 1 Score: 62.8 bits (151), Expect = 1.110e-6
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 1 
Query:  451 RKVERISTLETAVGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVP--ARAGRPLELLESTPNGIQRNPLVERVREYQKDGFAFRVAFRKLNCP 729
            R V  +  L   V  GD+ LFR RGL+SA QR ++ SEWDHV +VV    ++   L LLE+T  G+   PL  R+  Y     A  +A R+L  P
Sbjct:   12 RDVLHLRVLPYYVDAGDVLLFRSRGLVSACQRAMTCSEWDHVAMVVSDHRKSAGALLLLEATGEGVTALPLTSRLLAYSAS-HADLIALRRLQTP 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47565.11885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LQF4_ECTSI7.540e-9340.68PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JAA8_9PHAE8.800e-7637.48PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A024GTB5_9STRA9.280e-1343.64PX domain-containing protein n=1 Tax=Albugo candid... [more]
W2Q2W6_PHYPN7.660e-1038.26Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A2P4YQZ3_9STRA2.230e-938.05Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
V9EZL5_PHYPR2.720e-938.26PX domain-containing protein n=14 Tax=Phytophthora... [more]
A0A2P4YKI7_9STRA4.590e-944.29Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
H3HC99_PHYRM1.590e-738.46Uncharacterized protein n=21 Tax=Phytophthora TaxI... [more]
A0A2D4BXM9_PYTIN1.110e-641.05Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47565contigH-elongata_contig47565:176..3811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.9
Seed ortholog evalue1.5e-10
Seed eggNOG ortholog4792.ETI51573
KEGG koko:K10743,ko:K17923
KEGG Pathwayko03030,map03030
EggNOG free text desc.PhoX homologous domain, present in p47phox and p40phox.
EggNOG OGs3Q8UY@4776,KOG2528@1,KOG2528@2759
EC3.1.26.4
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko04131
Hectar predicted targeting categoryother localisation
Exons8
Model size1380
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47565.11885.1prot_H-elongata_contig47565.11885.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47565 212..3115 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930785.648003-UTR-H-elongata_contig47565:175..2111622930785.648003-UTR-H-elongata_contig47565:175..211Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47565 176..211 +
1691679569.310457-UTR-H-elongata_contig47565:175..2111691679569.310457-UTR-H-elongata_contig47565:175..211Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47565 176..211 +
1622930785.800289-UTR-H-elongata_contig47565:3115..34331622930785.800289-UTR-H-elongata_contig47565:3115..3433Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47565 3116..3433 +
1691679569.391104-UTR-H-elongata_contig47565:3115..34331691679569.391104-UTR-H-elongata_contig47565:3115..3433Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47565 3116..3433 +
1622930785.8120449-UTR-H-elongata_contig47565:3757..38111622930785.8120449-UTR-H-elongata_contig47565:3757..3811Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47565 3758..3811 +
1691679569.4051423-UTR-H-elongata_contig47565:3757..38111691679569.4051423-UTR-H-elongata_contig47565:3757..3811Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47565 3758..3811 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930785.6692283-CDS-H-elongata_contig47565:211..2741622930785.6692283-CDS-H-elongata_contig47565:211..274Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 212..274 +
1691679569.3244886-CDS-H-elongata_contig47565:211..2741691679569.3244886-CDS-H-elongata_contig47565:211..274Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 212..274 +
1622930785.6999745-CDS-H-elongata_contig47565:600..6741622930785.6999745-CDS-H-elongata_contig47565:600..674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 601..674 +
1691679569.3336487-CDS-H-elongata_contig47565:600..6741691679569.3336487-CDS-H-elongata_contig47565:600..674Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 601..674 +
1622930785.7196512-CDS-H-elongata_contig47565:1335..14531622930785.7196512-CDS-H-elongata_contig47565:1335..1453Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 1336..1453 +
1691679569.3438792-CDS-H-elongata_contig47565:1335..14531691679569.3438792-CDS-H-elongata_contig47565:1335..1453Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 1336..1453 +
1622930785.7347944-CDS-H-elongata_contig47565:1609..19001622930785.7347944-CDS-H-elongata_contig47565:1609..1900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 1610..1900 +
1691679569.3512247-CDS-H-elongata_contig47565:1609..19001691679569.3512247-CDS-H-elongata_contig47565:1609..1900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 1610..1900 +
1622930785.7521026-CDS-H-elongata_contig47565:2271..25031622930785.7521026-CDS-H-elongata_contig47565:2271..2503Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 2272..2503 +
1691679569.3585932-CDS-H-elongata_contig47565:2271..25031691679569.3585932-CDS-H-elongata_contig47565:2271..2503Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 2272..2503 +
1622930785.7702947-CDS-H-elongata_contig47565:2653..28461622930785.7702947-CDS-H-elongata_contig47565:2653..2846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 2654..2846 +
1691679569.366276-CDS-H-elongata_contig47565:2653..28461691679569.366276-CDS-H-elongata_contig47565:2653..2846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 2654..2846 +
1622930785.7855814-CDS-H-elongata_contig47565:3114..31151622930785.7855814-CDS-H-elongata_contig47565:3114..3115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 3115..3115 +
1691679569.3799183-CDS-H-elongata_contig47565:3114..31151691679569.3799183-CDS-H-elongata_contig47565:3114..3115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47565 3115..3115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47565.11885.1

>prot_H-elongata_contig47565.11885.1 ID=prot_H-elongata_contig47565.11885.1|Name=mRNA_H-elongata_contig47565.11885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MRIFPKAMEKIRRDQLEAYMQELLSIPEALTNRSVLSFLGLVSTSSHDLM
LPVNPLHKKEATEVSPPTPSPRTIPTLSSPTRHSATRPGSEHRCAVFGGS
RRPRDSAAHDDLYHAANSVGRDGRCGGPPPGPTGENELRKVERISTLETA
VGVGDIFLFRCRGLLSAFQRWVSRSEWDHVGVVVPARAGRPLELLESTPN
GIQRNPLVERVREYQKDGFAFRVAFRKLNCPRPAEASSRLEAFARQAEGK
VRSAGGMDMSFSFSRPRLNRVLTPGILSFSATASISTVKRYGAIPDSWLR
SGVGVKILRFHSAGFYLKKNKKK*
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mRNA from alignment at H-elongata_contig47565:176..3811+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47565.11885.1 ID=mRNA_H-elongata_contig47565.11885.1|Name=mRNA_H-elongata_contig47565.11885.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3636bp|location=Sequence derived from alignment at H-elongata_contig47565:176..3811+ (Himanthalia elongata Himel1 dioecious)
AGGCTGCCGAAGCCTGCCGCTCGTACGTTCGGGTTGATGAGAATATTCCC
GAAAGCGATGGAGAAAATTCGGAGAGATCAGCTGGAGGCGTATATGCAGG
TTAGGTTAGGTTAAGTCAGTCGACGTTTCAAGAGGCATTCTTGGATTACC
CTTTAAGCATGATATCCATCGTTCAAAGGGTGACGAACCGCAATCGAACG
GCTCCCAGAGGAGCAAATAAGTTGGAGTTCGGAGGGGTTTTTAATCCCCG
AGCTTCGATATTACAGAGTTGTATTCTCACAGGCAAGCGTTTGACGGTGA
CACATGTGCTTCCGTCGATGTTTCCGCTCGACGAGCTGCTGATAGCTGAA
GTTTCCAGCTGATTTGGGCTTCCCATTTTATTTGAAATCCCGCCTGCCCG
GATTCTCTCCGTGGGATCGCCTCAGGAGCTCCTATCGATCCCGGAGGCGT
TAACGAACCGATCGGTGCTCTCATTCCTGGGTTTGGTGTCGACGTCGAGG
TGAGAACGCACGACAGCTTCGGAATTGAAGCTCTAGGGACTTATGTCGTA
ACACGACACATATGCTGTATACCGGGCGGTCGCCTCTCGTAGCGTTTGCT
CTCAAGGCCCTGGACTGCTGTATGCGCTCTAGTTGGTGCACGAGAGAGTA
TGCCGCCGTGACGTGGTCAGGATAGAAGCTAAGCTGTGATCAGGCGGCGT
TCCTACCTTGGGGGGGGGGGTGTCGCGATCATGAACCTCTCCATAATGGC
GCGCGTGGCGGGGCGCCATCATGATGTGAAACCGTAGGCCTTCGTGATAC
GTTTTTGTTCGCACTCGTGATTAGCGGTTTTCAGGTGTTTTGCTGACTTG
AGCAGCTGTGCCTCTACTGTATAGTCTATTGGGTGAAAGGGAACATTAGT
TCGCCTGAACTGAAAGGGCGAGCAGCGTTTAACGTGTAGCAACAACACCA
GCCACTGCCGTTGGGCTCAACACGGATCTGGTTGATGCCCGCTGATTAGA
CGTGAGCGGTGGACGCGGAACCCGTGACACATCTGCCCGCGCTCGGGTGC
TCCGCAAGAACCCATGCATGGTCGTTCCCGTCAAGCTTCTTAGCATTCAT
GGACACTTCCGCTTCTTTTTTAAATTCCTCGTCTCGCGACCCCTGCTTTC
CTCCCGACAGCCACGACCTAATGTTACCAGTAAACCCCCTACACAAGAAG
GAGGCGACAGAGGTCTCTCCCCCCACCCCATCGCCTCGGACGATTCCGAC
CCTCTCCAGTCCGACGCGGCATTCGGCCGTGGACGTAAACCGCGGGGGGT
TCACGTTCACACCACAGAGGCCGCGATTGCCGTCACCGATTTCGACGGAG
AAGGGGCCGGTAACCGGAGCGGTGACCTCGCCCTGCGTTGAAGGGACAGG
CTACGAATCGGCGGACCCACGAGCGAGGCGGGAGACTCGGCCGGGCAGTG
AGCACCGTTGTGCCGTCTTCGGAGGTAGCAGACGCCCTCGAGACAGCGCC
GCTCACGACGACCTTTACCACGCGGCGAACAGTGTCGGACGCGACGGCAG
ATGCGGTGGACCGCCGCCGGGTCCGACGGGCGAAAATGAGCTAAGGAAAG
TCGAGAGGATTTCCACGCTGGAGACGGCTGTCGGAGTAGGAGACATCTTC
CTCTTCCGCTGCAGGGGGCTGCTCAGCGCCTTTCAGCGATGGGTATCGAG
GTCGGAGTGGGACCACGTGGGTGTGGTGAGTCGCACCATCTTTTCTCCCG
CGGCAAATAATCTTGGTAGAAAATGGCGGGCCTTTCCGGTGACTTGCCTG
TCGCCCGTCGAATACAGGGACGCCTCACTCAACGGCCCCCTGTTGCACGG
TTTCTAATACCACAGTCCCCCCCCCTCTCGGATAACTGGATGAATCGTTC
TGGCGCTGCAGTGTTAAGAGGAGAGAGATAAGGGGGGATTTGACTGGACA
TCTTTGTACGACGCTAGGATTTTGGCATCGCTCCAGAATGGCCGTTTTTA
TTTATTTTTTTCACCTCTTTTATTACTACCACTTCTTTGATAACTCGAAC
TAGTTGTCGGGTTTGGACAAAAACTTGGTGAAACAACATGTTCCAGGTAG
TGCCGGCACGAGCTGGGCGACCGCTAGAGCTTCTTGAGTCTACCCCCAAC
GGCATCCAACGCAATCCGCTCGTAGAGCGAGTGCGCGAGTACCAAAAAGA
CGGCTTCGCTTTCCGGGTGGCGTTTAGAAAGCTGAACTGTCCGCGACCAG
CGGAAGCGAGCTCTCGTCTCGAGGCCTTCGCTCGGCAGGCAGAGGGAAAG
GTGAGGTCTGCCGGGGGGATGGATATGTGTCTGATCATCACATATAAGAC
AGTTAGGATCAATCGGATTTGGTTGCCTTCTGCTCGTGGTCAGCTGAACA
GGGAAAATAATTTTCCCCTGTCCCGAGCCTGAGAATTTGGTCTCGCGAGA
CGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTTCTCATTCTCTCGACCCAG
GCTGAATCGGGTGCTTACTCCCGGGATCCTATCTTTTTCCGCGACGGCGT
CCATCTCTACCGTGAAACGCTATGGGGCCATTCCCGATTCTTGGCTCCGC
TCGGGCGTTGGGGTAAAGATTCTCAGGTTCCATAGTGCGGGTTTTTATTT
AAAAAAAAACAAAAAAAAATGGTAAAGCAGCACACGATGATGCGTCTTCT
CCCGAGGCACGGTTATCAAGTGTACGATGGTAAGATAGTGGTGCCGTACC
GGGTACGGTTTGAACGATCATACACCGCCGCGCGCCCCCAAAGATTTTTC
TTTCTTTAGCGTTAGGCTTCAATTGTTCGCGCCGGTTACTCCTCCCCCCC
CAACTCCTTGAACCATCTCCCATGTATGTCTTAATGATTTGTTTTTCTCA
GGGATATGGTGTTGTTCTCCCCTTTCCTCGTTGGATGAGAGGAGAAAAGC
GCCCCGAACCGCAAACGCTTCCAGCTCTTGCCACGCCCGATCCCTCCCGA
CCTCACCACCCCCTACGCCCGAGAAAAGGAGATGCCTCTTCAACCAGTCC
CCCCAGTCTACAGCGCGGGGACTCCCGCCAGGTGCCCCACTCGTACCTGT
GCTCGCAGCTTGTTGGCGCGGCCCTGACGGAAATGGGTTTGGTGAGAGAC
GGGATCGGGGGAAGGAAGGGGCCATGGTCCTGGGTACTTCCCGTCGCGTT
CGCGCAGGGAGGCGCGGTGGAAAGGGGTCTGGCTGACGGCGTCACCCTTG
GAGAAGAGGTTAGCGAGATTTTCATTTTTTACGCTTGGAGCGAGCTTCTT
TAAACCGACGCACGACTCTCGTCTGGTTGGGGCCGAGGGGAGCTTACGGC
GGTTGTACCGGGAGTTGTTCCAGCTCGTGCTGAGCTCGAAGGTCTAGAGA
GAAAATGGACGTCTGTAACAGGGACGGATTACTTCAAGCGCGCGTTTGCG
GATGTTCATGTAAATTAGCGCGGGCGGCCAAGTACACGAGGTCGCTGAAA
CGTGCGCGCTGTAGACGCCCACGCGCGATGACCTCCGATTATATTTCCCC
GATTTTCCACTGTGCTCTGTCTTTATCTTTAGGTATTTGTGGATGGACAC
GAGCCTGAGGTGGCTACCGCCATCCTTCTCGGAGAA
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Coding sequence (CDS) from alignment at H-elongata_contig47565:176..3811+

>mRNA_H-elongata_contig47565.11885.1 ID=mRNA_H-elongata_contig47565.11885.1|Name=mRNA_H-elongata_contig47565.11885.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig47565:176..3811+ (Himanthalia elongata Himel1 dioecious)
ATGAGAATATTCCCGAAAGCGATGGAGAAAATTCGGAGAGATCAGCTGGA
GGCGTATATGCAGATGAGAATATTCCCGAAAGCGATGGAGAAAATTCGGA
GAGATCAGCTGGAGGCGTATATGCAGGAGCTCCTATCGATCCCGGAGGCG
TTAACGAACCGATCGGTGCTCTCATTCCTGGGTTTGGTGTCGACGTCGAG
GAGCTCCTATCGATCCCGGAGGCGTTAACGAACCGATCGGTGCTCTCATT
CCTGGGTTTGGTGTCGACGTCGAGCCACGACCTAATGTTACCAGTAAACC
CCCTACACAAGAAGGAGGCGACAGAGGTCTCTCCCCCCACCCCATCGCCT
CGGACGATTCCGACCCTCTCCAGTCCGACGCGGCATTCGGCCCCACGACC
TAATGTTACCAGTAAACCCCCTACACAAGAAGGAGGCGACAGAGGTCTCT
CCCCCCACCCCATCGCCTCGGACGATTCCGACCCTCTCCAGTCCGACGCG
GCATTCGGCCACTCGGCCGGGCAGTGAGCACCGTTGTGCCGTCTTCGGAG
GTAGCAGACGCCCTCGAGACAGCGCCGCTCACGACGACCTTTACCACGCG
GCGAACAGTGTCGGACGCGACGGCAGATGCGGTGGACCGCCGCCGGGTCC
GACGGGCGAAAATGAGCTAAGGAAAGTCGAGAGGATTTCCACGCTGGAGA
CGGCTGTCGGAGTAGGAGACATCTTCCTCTTCCGCTGCAGGGGGCTGCTC
AGCGCCTTTCAGCGATGGGTATCGAGGTCGGAGTGGGACCACGTGGGTGT
GACTCGGCCGGGCAGTGAGCACCGTTGTGCCGTCTTCGGAGGTAGCAGAC
GCCCTCGAGACAGCGCCGCTCACGACGACCTTTACCACGCGGCGAACAGT
GTCGGACGCGACGGCAGATGCGGTGGACCGCCGCCGGGTCCGACGGGCGA
AAATGAGCTAAGGAAAGTCGAGAGGATTTCCACGCTGGAGACGGCTGTCG
GAGTAGGAGACATCTTCCTCTTCCGCTGCAGGGGGCTGCTCAGCGCCTTT
CAGCGATGGGTATCGAGGTCGGAGTGGGACCACGTGGGTGTGGTAGTGCC
GGCACGAGCTGGGCGACCGCTAGAGCTTCTTGAGTCTACCCCCAACGGCA
TCCAACGCAATCCGCTCGTAGAGCGAGTGCGCGAGTACCAAAAAGACGGC
TTCGCTTTCCGGGTGGCGTTTAGAAAGCTGAACTGTCCGCGACCAGCGGA
AGCGAGCTCTCGTCTCGAGGCCTTCGCTCGGCAGGCAGAGGGAAAGGTGA
GGTCTGCCGGGGGGATGGATATGTGTAGTGCCGGCACGAGCTGGGCGACC
GCTAGAGCTTCTTGAGTCTACCCCCAACGGCATCCAACGCAATCCGCTCG
TAGAGCGAGTGCGCGAGTACCAAAAAGACGGCTTCGCTTTCCGGGTGGCG
TTTAGAAAGCTGAACTGTCCGCGACCAGCGGAAGCGAGCTCTCGTCTCGA
GGCCTTCGCTCGGCAGGCAGAGGGAAAGGTGAGGTCTGCCGGGGGGATGG
ATATGTCCTTCTCATTCTCTCGACCCAGGCTGAATCGGGTGCTTACTCCC
GGGATCCTATCTTTTTCCGCGACGGCGTCCATCTCTACCGTGAAACGCTA
TGGGGCCATTCCCGATTCTTGGCTCCGCTCGGGCGTTGGGGTAAAGATTC
TCAGGTTCCATAGTGCGGGTTTTTATTTAAAAAAAAACAAAAAAAAATGC
CTTCTCATTCTCTCGACCCAGGCTGAATCGGGTGCTTACTCCCGGGATCC
TATCTTTTTCCGCGACGGCGTCCATCTCTACCGTGAAACGCTATGGGGCC
ATTCCCGATTCTTGGCTCCGCTCGGGCGTTGGGGTAAAGATTCTCAGGTT
CCATAGTGCGGGTTTTTATTTAAAAAAAAACAAAAAAAAATGAA
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