mRNA_H-elongata_contig4739.11855.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: D7FLK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK0_ECTSI) HSP 1 Score: 500 bits (1287), Expect = 7.100e-154 Identity = 350/899 (38.93%), Postives = 425/899 (47.27%), Query Frame = 1
Query: 4 EITTNLAYNATSVEVQAALEGLRTVAAAEVELISSLPESRGG-GSTFLITFTGATGVSSPMGGPSLLISTIDLDGTGAEVSIREVYPGSRC--------------------------------------------------------------------------------------------------SPGGTFILKFKGDVTSPIPWRANATYVETALEALPQVGDVTVNRE-----------EISPTATNWLVDFTTLGTPANIGDLPLLEVDDSFLIGPFVSIAVEEISAGCCIVEISANGGADFT-TVSDGE-EYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSD-FACVFGARLESPAVRLNSTAVTCTSPPTPLREAATMSVTVLCPGSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPD----LNFTAGGIKTE---------MILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGVNLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRFMRPHGAYHENELLCRFGNTMPVPARYISNSTITCKSSPHTNEAAIVSVMVGGASLFHSTQEV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVVTLAADAALSGDFTLIYPGLGSTEPLPHDTSSKALASAICSLGPDQ--REPVTVARSRTGVRGYAWSITF 1788
E T L +NAT+ EV+ ALE L +VAAA VEL++ LP G GST+L+TFTGA+G +SP+GG SL S L+GTGAE ++ EV+PGSR S GGTF L F GDV+ P+ W A+A VE ALE+LPQVGDVTV E S TA +W V+FTT+GTPANIGDLPLLE D SFL G V + VEEISAGCC VE+SANGGAD+T T SDG TAAFRYQDRA V+SV P +GPASGGT + L GTGF+ P + + D F CVFG RLESPA RLNST VTC SP TPLRE MSV+V P V S TTA FT+ EDVTL+A+ P GSN G ++TAV +G+GS + G A L S L ++A ++ M+ N+E Y C+MP L DFFPG++ +W+ W +IALVSLSGN GV+LTAP TF Y P+PT++ P LG D GGT VVV GT P G Y E+EL CRFG P PA+YIS+S ++C SS HTN AAIVSV V A +FH+TQEV QVVTLAA+ ALSG+FT+ YP +GSTEPL HD S++A ASA+ +L PD VTV+RSRTGVRG+AW++TF
Sbjct: 7591 ETTAFLDHNATATEVRTALEALSSVAAANVELVNFLPSGNGSAGSTYLVTFTGASGAASPIGGLSLTTSAAGLNGTGAETTVGEVHPGSRWGGEFALSIGGLEGSALPFDARAEEMQEAVSALLASAGGENDENGVEVWREDYEAGFRWISVFYGGDLDGDIDLMEVAWSALHGTEGSVQVYRRTDGADSAGGTFTLAFNGDVSEPLLWNASAASVEQALESLPQVGDVTVVAETPQKSDATVDQNSSETAVSWTVEFTTVGTPANIGDLPLLEADGSFLTGTTVGVRVEEISAGCCEVEVSANGGADYTSTGSDGTGSSTTAAFRYQDRATVRSVTPSSGPASGGTAVFLSGTGFDLPSTSGNDMHGDDFVCVFGGRLESPATRLNSTTVTCASPFTPLRETGAMSVSVRWPALVSPSTTTAAFTFHEDVTLQALSPRRGSNVGVYTTAVFIGRGSFVAVGIADVSCVIEVRLPSNITGGYTALTYSAPAVELSSSLHTAEVTMVSNKEGYGCDMPTLEDFFPGVSIEDWVDNDWDAIALVSLSGNGGVDLTAPLTFTYFPKPTVVAASPGLGGDGGGTSVVVHGTWLSPPEGGYDESELFCRFGLAPPAPAQYISDSAVSCTSSSHTNVAAIVSVEVESARVFHATQEVLLRIPSPMASQPNASSHYSGSGTWTLSLEDYSTVSMGANVTAGEMATALSAMPNIGNATVSAEHRTLSDPYAGLSWNETLFTVYFAARGGDLPVLSADVSDLRLKSSEGTAVDGFDQDVFGFPVLAPEVSVNVAERGHDGDGIVREVQVLRTNRSSLVEEVQTVTVTTGLSPAAEVQVVTLAANEALSGEFTVTYPDVGSTEPLAHDVSAEAFASAMRALDPDDIGGAGVTVSRSRTGVRGFAWTVTF 8489
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A6H5JBB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB5_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 1.140e-148 Identity = 346/901 (38.40%), Postives = 423/901 (46.95%), Query Frame = 1
Query: 4 EITTNLAYNATSVEVQAALEGLRTVAAAEVELISSLPESRGG-GSTFLITFTGATGVSSPMGGPSLLISTIDLDGTGAEVSIREVYPGSRC--------------------------------------------------------------------------------------------------SPGGTFILKFKGDVTSPIPWRANATYVETALEALPQVGDVTVNREEISPT-----------ATNWLVDFTTLGTPANIGDLPLLEVDDSFLIGPFVSIAVEEISAGCCIVEISANGGADFT-TVSDGE-EYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANS---DFACVFGARLESPAVRLNSTAVTCTSPPTPLREAATMSVTVLCPGSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPD----LNFTAGGIKTEMIL---------NEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGVNLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRFMRPHGAYHENELLCRFGNTMPVPARYISNSTITCKSSPHTNEAAIVSVMVGGASLFHSTQEV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVVTLAADAALSGDFTLIYPGLGSTEPLPHDTSSKALASAICSLGPDQ--REPVTVARSRTGVRGYAWSITF 1788
E T L +NAT+ EV+ ALE L +VAA +VE+++ LP G G T+L+TF GA+G +SP+GG SL S L+GTGAE ++ EV+ GSR S GGTF L FKGDV+ P+ W A+A VE ALE+LPQVGDVTV E + A +W V+FTT+GTP NIGDLPLLE D SFL G V ++VEEISAGCC VE+SANGGAD+T T SDG TAAFRYQDRA V+SV P +GPASGGT + L GTGF+ P SG ++ DF CVFG RL+SPA RLNST VTC SP TPLRE MSV+V P V S TTA FT+ EDVTL+A+ P GSNAG ++TAV +G+GS G A S L ++A ++ L N+E Y C+MP L DFFPG++ +W+ W +IALVSLSGN GV+LTAP TF Y P+P ++ P LGVD GGT VVV GT F P G Y ++EL CRFG P PA+YIS+S ++C SS HTN AAIVSV V A +FH+TQEV QVVTLAA+ ALSG+FT+ YP +GSTEPL HD S++A ASAI +L PD VTV+RSRTGVRGYAW++TF
Sbjct: 7237 ETTAFLDHNATATEVRTALEALSSVAAVDVEIVNFLPSGDGSAGCTYLVTFAGASGAASPIGGLSLTTSAAGLNGTGAETTVGEVHRGSRWGGEFSLSIGGLQGSALPFDARAEEMQEAVSALLASAGSENDENSVEVWREDYEAGFRWIAAFSGGDLDGDIDLMEVAWSSLHGTDGSVQVYRSTDGADSAGGTFTLAFKGDVSEPLLWNASAESVEQALESLPQVGDVTVVAETHQKSDAPIDQNSLEIAASWKVEFTTVGTPTNIGDLPLLEADGSFLTGTTVGVSVEEISAGCCEVEVSANGGADYTSTGSDGTGSSTTAAFRYQDRATVRSVTPSSGPASGGTAVFLSGTGFDLPST--SGNDTRGGDFVCVFGGRLQSPATRLNSTTVTCASPFTPLRETGAMSVSVRWPALVSPSTTTAAFTFHEDVTLQALSPRRGSNAGVYTTAVFIGRGSFAAVGIADVSCVIEVRFPSNITGGYKALTYSAPAVELLSSLHTAEVTTFSNKEGYGCDMPSLEDFFPGVSIEDWVDNDWGAIALVSLSGNGGVDLTAPLTFTYFPKPAVVAALPGLGVDGGGTSVVVHGTWFSPPEGGYDDSELYCRFGLGPPAPAQYISDSAVSCTSSSHTNVAAIVSVEVESARVFHATQEVLLRIPLPMASQPNASSHYSGSGTWTLSLEDYSTVSMGANVTAGEMATALSSLPNIGNASVSAEHRTLSDPYAGLSWNETLFTVYFAARGGDLPVLSTDVSDLRLKSSEDTAVDGFNQDVFGFPVLTPEVSVNVAERGHDGDGIVREVQVLRTNRSSLVEEVQTVTVTTGLSPTAEVQVVTLAANEALSGEFTVTYPDVGSTEPLAHDVSAEAFASAIRALEPDDIGGADVTVSRSRTGVRGYAWTVTF 8135
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A812R3T1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812R3T1_9DINO) HSP 1 Score: 123 bits (309), Expect = 1.610e-25 Identity = 138/477 (28.93%), Postives = 197/477 (41.30%), Query Frame = 1
Query: 214 DLDGTGAEVSIREVYPGSRCSPGGTFILKFKGDVTSPIPWRANATYVETALEALPQVGDVTVNR-------EEI-------SPTAT--------------NWLVDFTTLGTPANIGDLPLLEVDDSFLIGPFVSIAVEEISAGCCIVEISANGGADFTTVSDGEEY--HTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFG------------------------ARLESPAVRLNSTAVTCTSPPTPLREAATMSVTVL----CPGSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMI-----LNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIAL----VSLSGNEGVNLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRFMRPHGAYHENELLCRFG 1443
+L G ++ EV G+ G F L F+G T P+ +A ++ ALE LP +G V V+ EE+ SPT +WLV FT + P NIGDL +E+D +++ G V+ + E+ GCC V T DG+ Y +A F+Y R +V +V P +G GGT II+ G GF P D + CVFG A PAV +NSTAV CT TPL E + VT+ + + ++A FTY TL A+ P G GG + + + +T S L R + + G + TE + ++E +C PG+ D F L G+H Q+ A+ VS++ N F Y P P + + G GG L+ V G F + EL CRFG
Sbjct: 1576 NLVGPTPRATVEEVSSGT-VPLSGHFYLAFEGYRTVPLAPSVSAEGLKAALEELPSIGSVEVSTDYNLWTDEELLAQLSVKSPTTWPYDAMNIAEVQYVHSWLVTFTGMSRPYNIGDLESMEIDTTWVSGDKVAAKIVEVRRGCCKV----------TVTLDGQSYAESSAWFKYDQRPLVMAVTPSSGSVFGGTDIIVTGVGF-VPSD-------ETYCVFGKDLSWKATHHAPTVGVPYTSDVSPAMTRVPAVVINSTAVACT---TPLHEEGPVLVTITQNSHFSNASSNAASSATFTYRRAATLLALEPQHGPAFGGTNVHIK------------GENFTPSDKLACRF--VRRSGGMVGTERVTPGAFVSETEIICRTPGMADAFYELFD----GWHTQAAAVGSDEVSVTVNGKDFADEALIFSYHPAPVVESLSSLRGPVMGGGLLQVTGRNFR------NTTELECRFG 2006
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A8J2SBJ3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBJ3_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.240e-22 Identity = 153/532 (28.76%), Postives = 217/532 (40.79%), Query Frame = 1
Query: 232 AEVSIREVYPGSRCSPG-GTFILKFKGDVTSPIPWRANATYVETALEALPQVGDVTVNREEISPTATNWLVDFTTLGTPANIGDLPLLEVDDSFLIGPFVSIAVEEISAGCCIVEISANGGADFTTVSDGEEYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFA-CVFGARLESPAVRLNSTAVTCTSPPTPLREAAT--------MSVTVLCPGSVGYSITTAVFTYFEDVTLEAVIP-LWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGVNLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVV----RGTRFMRPHGAYHENELLCRFGNTMPVPARYISNSTITCKSSPHTNEAAIVSVMVGGASLFHSTQEVQVVTLAADAALSGDFTLIYPGLGSTEPLPHDTSSKALASAICSLGPDQREPVTVARSRTGVRGYAWSI 1782
A V IRE G+ S G F + ++G T P +E +LE LP VGDV V+ E +++V FT+LG P N+GDLPLL+ +G ++V +IS GCC V +S NG D A V S+ P +GP GGT + + G P SD CVFG S A R+++ TC SP A S T+ G A F Y + + P L S GG G + ND + + + + + P+ F + K LN C P L F A ++ V +G + +A T Y P L V PS G SGG+ V + T + A + +C FG T+ VPA Y S + C + + A+ +V V A++ S QEV+V +A AA SG FTL+ G S +P + S+ + A+ +L V S G +WSI
Sbjct: 4715 ASVRIRETRKGAPSSKAAGQFTISYQGATT---PGLQIGAPIEESLEKLPTVGDVVVSTHE-DVDQVSYVVTFTSLGNPTNLGDLPLLQATH-LQMGDAARVSVRKISTGCCDVSLSFNG-------QDWHAKQGLAHGRDGMGQVVSLHPASGPTRGGTVVTVTIAGGLLP-------PSDLLWCVFGGA-RSRATRIDTQRCTCLSPAFAAGSVAVEVSAHSLEASATIARAGP-------ASFRYHAEEAVSHTTPTLIDSRQGG--PIHVYGTFTEENDKRSCRFDVEAPPAVHKLPE-RFVSRTTKA-YALNASTVACKAPPLSAFDVEDASVV------RARVYVLENGVDPSRSSA--TLWYARAPRALTVHPSSGPRSGGSSVRITTDWNETEWAAARAAGALEDAVCDFGGTL-VPASYASRDILECTAPSLEPKRALHTVEVSSAAITSSVQEVEVRLNSAGAA-SGSFTLMLEGHVSAS-IPINASNMEVQQALNALPSVGFVTVLSNASVVVEGGSSWSI 5204
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A2R5G2D9_9STRA (Hepatocyte growth factor receptor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2D9_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.300e-22 Identity = 143/516 (27.71%), Postives = 220/516 (42.64%), Query Frame = 1
Query: 10 TTNLAYNATSVEVQAALEG---LRTVAAAEVELISSLPESRGGGSTFLITFTGATGVSSPMGGPSLLISTIDLDG-TGAEVSIREVYPGSRCSP-GGTFILKFKGDVTSPIPWRA-NATYVETALEALPQVGDVTVN---REEISPTATNWLVDFTTLGTPANIGDLPLLEVDDSFLIGPFVSIAVEEISAGCCIVEISANGGADFTTVSDGEEYH-TAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFGARLESPAVRLNSTAVTCTSPPTPLREAATMS--------VTVLCP---GSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGVNLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRFMRPHGAYHENELLCRFGNTMPVPARYISNSTITC 1494
T L +TS E++ AL L + V SSL E R ++TF GV +G +D+ G TG E + R + GGTF + ++G + + + A+ + T L++LP VG V V+ REE + W + FT+ G+PANIG LPLL+V+ F +G + I AGCC + ++ DG+++ T A+RY V S+ P+ G G T + +HG+GF + IS CVF LESPA +N + + C +PP + A ++ VTV P S T A F + + ++ + P GS GG V L L++ A+ + T L A ++ L C +P PGL V+L+G++ A F Y + + + G +GGTL+ V G+ R EL C FG+ PA + ++S +C
Sbjct: 6394 TRTLDVTSTSSEIEVALREDVELNATVSETVIANSSLWEKR-----IILTFDDLEGVPLELG--------VDITGVTGTESAFRVIDMARGAQRLGGTFRVGYEGAWSPQLSFSTLTASDLATTLQSLPTVGTVRVSEILREEDA--FARWRITFTSRGSPANIGPLPLLDVESDFGVGTNFYLRANRIQAGCCSLSVTI----------DGQQFSDTLAYRYDWHPQVASLSPQYGSPHGKTLLSIHGSGF-YEAQAIS-------CVFDGTLESPARFVNESMLACVTPPLSALQDANLTLAGQRDVHVTVRYPLDHAETHESQTFATFKFSLPLHIQTIQPPRGSLRGGVVLRVTLEHNITLDE-------VDHAACVFETNPLETVAATRESARSL-----ACLVP---SHAPGLVAVR-----------VTLNGHDLSKNAA--FFQYEEAVRVHSLSVTSGSRAGGTLIHVYGSNIPR------SEELSCDFGDRGMAPAMWHASSQASC 6842
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A482S181_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S181_9ARCH) HSP 1 Score: 97.4 bits (241), Expect = 3.810e-17 Identity = 134/466 (28.76%), Postives = 202/466 (43.35%), Query Frame = 1
Query: 76 VAAAEVE-LISSLP---------ESRGGGSTFLITFTGATGVSSPMGG-PSLLISTIDLDGTGAEVSIREVYPGSRCSPGGTFILKFKGDVTSPIPWRANATYVETALE-ALPQVGDVTVNREEI-----SPTATNWLVDFTTLGTPANIGDLPLLEVDDSFLIG-PFVSIAVEEISAGCCIVEISANGGADFTTVSDGEEYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFGARLESPAVRLNSTAVTCTSPPTPLREAATMSVTVLC---PGSVGYSITTA-VFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAG--GIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGVNLTAPKTFIYV-PRPTILEVQPSLGVDSGGTLVVVRGTRFMR 1398
+ AA++E L+ SLP E G+ FL+TF PMG SL I + +L GT A + EV G S G + F T P+ +A + T L +L VGDV V++ + + WLV FTTLGTP+NIG+ + V + FV+ +SA CC + +++NGG +T + + YQ VV S+ P G GGT + + GT F P C FG+ + + A ++S+ TC +PP + + VT++ V + ++A VFT+ +T+ A P G V LG N G + S S + P L + +NE C+ P F G+ YH +S SL+ + + +Y+ PT+L +QPSLGV G T V +RG F++
Sbjct: 3529 ITAADLERLLKSLPYIDDVAVSKEMLSVGNRFLVTFI------RPMGDIESLRIVSTNLQGTQATAATYEVQKGIG-SINGFLSISFGNSTTGPLDITTSAADMRTKLMGSLYSVGDVQVSKNVYFALGDALKSVQWLVTFTTLGTPSNIGNTEVFTVHQTLPTNREFVAETKRTLSA-CCDIRLTSNGGFQYT-----RNFTSLVLDYQP--VVISLHPVIGDVRGGTNVEVFGTNFINPE-----LTHKVYCKFGS-VVTQATIVSSSYATCLAPP---HQQGRVLVTLMFFQQDQLVNRTASSASVFTFEPVLTMLAYNPKEGYILSETLVTVQLG-----NMGAYRELINCSWSTVINNPLLGRVGPFYSLYPANFVNESHVSCSTPNATVFINAQFGSL---YHLESNGTSSLTLTKNNQSFSNSLDVYLYATPTLLMMQPSLGVTGGNTRVFLRGRNFVK 3962
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A7S2LSA9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LSA9_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.460e-16 Identity = 130/501 (25.95%), Postives = 206/501 (41.12%), Query Frame = 1
Query: 205 STIDLDGTGA---EVSIREVYPGSRCSPGGTFILKFKGDVTSPIPWRANATYVETALEALPQVGDVTVNR----------------------------EEISPTATNWLVDFTTLGTPA------NIGDLPLLEVDDSFLIGP----------FVSIAVEEIS------AGCCIVEISANGGADFTTVSDGEEYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFGARLES--------PAVRLNSTAVTCTSPPT----PLREAATMSVTVLCPGSVGY-SITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGVNLTAPKTFIYVPRPTILEVQPSLGVD-SGGTLVVVRGTRFMRPHGAYHENELLCRFGNTMPVPARYISNSTITCKSSP 1506
+TIDL G+ A V+ E R F + + T+ IP A+A VE ALE+LP + DV+V EI + T+ + + +G+ A + GDLPLL++D+S LIG F++ E + +G VE+S NGG DF+T F+Y AVV + P GP +GGT I ++G F IS C+F + S A ++ + +TC +PP+ + A + + GSV Y ++ +TY+E + + AV+P+ G +G F+ V G + + AS R + I + ++E+ C P P G + ++++GN+ ++ P F Y I+E+ P G + GT+V VRG F + LCRFG + VPA +I + + C S P
Sbjct: 825 TTIDLGGSFAINFGVTCTEALARRRND--NEFAVVCENATTADIPITASAMDVEMALESLPSIIDVSVKLTDQSCTTCYQVPVASGVIGQMKSFHVSFHEIIHSMTSQVTETILMGSNAYTFDLLSKGDLPLLKIDESKLIGSQTKDSSILPEFMTSVTELVKGLDNDVSGIVAVEVSVNGGHDFSTSG-------VVFQYLPIAVVSKIRPHMGPTNGGTDITVYGDNFE-QVPAIS-------CLFWSSSNSGVSPVAVYAASYISRSMITCVTPPSFFVGDVFVAVSNNGVHGMSGSVDYLQPFSSKYTYYEQIQVNAVVPMSGPASGNFAVRVLGGS------------FISFASFHCRFGE------AIVDGVFISEQEIACKSP------PNRPGIQPFD--------IAMNGNDFTSIAHP--FRYHDEIRIVEITPKSGPALAAGTVVHVRGENFQ------NSTSTLCRFGLS-EVPAIFIDHQQLHCHSPP 1267
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A5A8EE09_CAFRO (Chitin-binding type-2 domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE09_CAFRO) HSP 1 Score: 75.9 bits (185), Expect = 1.950e-10 Identity = 101/331 (30.51%), Postives = 135/331 (40.79%), Query Frame = 1
Query: 547 ISAGCCIVEISANGGADFTTVSDGEEYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFG---ARLESPAVRLNSTAVTCTSPP--TPLREAAT------MSVTVLCPGSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGV--NLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRF--MRPHGAYHENELLCRFGNTMPVPARYISNSTITC 1494
+S G VE+S NGG DF+ S G F Y V S+ P G GGT + + G F + AN C FG A SPAV L+ + V C SPP P E A + + V G + A F Y V L + P GS GG + V+ S L G A AS L R G I+ +V +C P PG A + ++L+G + + A TF++ P P + V PS G SGGT VVV GT F +R G + LCRFG+ A ++ + + C
Sbjct: 4827 LSEGAVAVEVSTNGGVDFS--SSGVR-----FSYTLLPGVFSLFPSVGSEVGGTVVAVWGDFF------LDSAN--LTCRFGTGGAATFSPAVWLSPSKVQCVSPPFVPPADELAPADGLYRVEIAVSNNGVDFSDPSAARFAYHAPVLLRSADPAAGSAQGGTTVVVSA---SGLRSGAA-------ASALCRF------GGDTVPLTIVAHDVGVCVTPARA---PGPAQLQ-----------IALNGQDFAPRDPGAALTFVFTPVPRVTAVAPSGGSSSGGTRVVVTGTGFDALRKAGRQDDEAPLCRFGDA-ETTAAVLNATAVAC 5111
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A5A8CPQ3_CAFRO (Chitin-binding type-2 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPQ3_CAFRO) HSP 1 Score: 75.9 bits (185), Expect = 1.950e-10 Identity = 101/331 (30.51%), Postives = 135/331 (40.79%), Query Frame = 1
Query: 547 ISAGCCIVEISANGGADFTTVSDGEEYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFG---ARLESPAVRLNSTAVTCTSPP--TPLREAAT------MSVTVLCPGSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGV--NLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRF--MRPHGAYHENELLCRFGNTMPVPARYISNSTITC 1494
+S G VE+S NGG DF+ S G F Y V S+ P G GGT + + G F + AN C FG A SPAV L+ + V C SPP P E A + + V G + A F Y V L + P GS GG + V+ S L G A AS L R G I+ +V +C P PG A + ++L+G + + A TF++ P P + V PS G SGGT VVV GT F +R G + LCRFG+ A ++ + + C
Sbjct: 4861 LSEGAVAVEVSTNGGVDFS--SSGVR-----FSYTLLPGVFSLFPSVGSEVGGTVVAVWGDFF------LDSAN--LTCRFGTGGAATFSPAVWLSPSKVQCVSPPFVPPADELAPADGLYRVEIAVSNNGVDFSDPSAARFAYHAPVLLRSADPAAGSAQGGTTVVVSA---SGLRSGAA-------ASALCRF------GGDTVPLTIVAHDVGVCVTPARA---PGPAQLQ-----------IALNGQDFAPRDPGAALTFVFTPVPRVTAVAPSGGSSSGGTRVVVTGTGFDALRKAGRQDDEAPLCRFGDA-ETTAAVLNATAVAC 5145
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Match: A0A5A8CP20_CAFRO (Chitin-binding type-2 domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP20_CAFRO) HSP 1 Score: 75.9 bits (185), Expect = 1.950e-10 Identity = 101/331 (30.51%), Postives = 135/331 (40.79%), Query Frame = 1
Query: 547 ISAGCCIVEISANGGADFTTVSDGEEYHTAAFRYQDRAVVQSVVPRAGPASGGTPIILHGTGFNFPFDVISGANSDFACVFG---ARLESPAVRLNSTAVTCTSPP--TPLREAAT------MSVTVLCPGSVGYSITTAVFTYFEDVTLEAVIPLWGSNAGGFSTAVALGQGSILNDGYASQKYTTSASLLSRTPDLNFTAGGIKTEMILNEEVYLCNMPGLGDFFPGLAGAEWLGYHWQSIALVSLSGNEGV--NLTAPKTFIYVPRPTILEVQPSLGVDSGGTLVVVRGTRF--MRPHGAYHENELLCRFGNTMPVPARYISNSTITC 1494
+S G VE+S NGG DF+ S G F Y V S+ P G GGT + + G F + AN C FG A SPAV L+ + V C SPP P E A + + V G + A F Y V L + P GS GG + V+ S L G A AS L R G I+ +V +C P PG A + ++L+G + + A TF++ P P + V PS G SGGT VVV GT F +R G + LCRFG+ A ++ + + C
Sbjct: 5317 LSEGAVAVEVSTNGGVDFS--SSGVR-----FSYTLLPGVFSLFPSVGSEVGGTVVAVWGDFF------LDSAN--LTCRFGTGGAATFSPAVWLSPSKVQCVSPPFVPPADELAPADGLYRVEIAVSNNGVDFSDPSAARFAYHAPVLLRSADPAAGSAQGGTTVVVSA---SGLRSGAA-------ASALCRF------GGDTVPLTIVAHDVGVCVTPARA---PGPAQLQ-----------IALNGQDFAPRDPGAALTFVFTPVPRVTAVAPSGGSSSGGTRVVVTGTGFDALRKAGRQDDEAPLCRFGDA-ETTAAVLNATAVAC 5601 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4739.11855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig4739.11855.1 >prot_H-elongata_contig4739.11855.1 ID=prot_H-elongata_contig4739.11855.1|Name=mRNA_H-elongata_contig4739.11855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=596bp SEITTNLAYNATSVEVQAALEGLRTVAAAEVELISSLPESRGGGSTFLITback to top mRNA from alignment at H-elongata_contig4739:2453..5646+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig4739.11855.1 ID=mRNA_H-elongata_contig4739.11855.1|Name=mRNA_H-elongata_contig4739.11855.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3194bp|location=Sequence derived from alignment at H-elongata_contig4739:2453..5646+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig4739:2453..5646+ >mRNA_H-elongata_contig4739.11855.1 ID=mRNA_H-elongata_contig4739.11855.1|Name=mRNA_H-elongata_contig4739.11855.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3576bp|location=Sequence derived from alignment at H-elongata_contig4739:2453..5646+ (Himanthalia elongata Himel1 dioecious)back to top |