mRNA_H-elongata_contig47292.11839.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: D8LMQ3_ECTSI (Nitroreductase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMQ3_ECTSI) HSP 1 Score: 152 bits (385), Expect = 1.910e-43 Identity = 76/105 (72.38%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 1 VSAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFGVGMAGIDPV 315
V++ EAWSFKNTALAVQTYIL+CTA+GL TAPMEGFDARR RAALDIPDRY IP++V TGYP AP + + Q G V +RWRYP +EVVFDG FGVGM G+DPV
Sbjct: 212 VASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYP-APSKPEGQGGGGGVA-RRWRYPPQEVVFDGTFGVGMTGVDPV 314
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A835Z3C4_9STRA (Putative nitroreductase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.700e-22 Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 1 VSAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFG 288
V++ EAWS+K+ LA QTY+LA TA+GLATAPMEGFD RR AALD+PDRY + + V TGY ED Q WR+ EE+VF FG
Sbjct: 137 VTSTEAWSYKHAGLAAQTYLLAATAHGLATAPMEGFDGRRVCAALDVPDRYGVAVAVATGY------EDPQHAPSAA---SWRFAPEEMVFLDRFG 223
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A7S4DH27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH27_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 1.040e-21 Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 4 SAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFG 288
+A EAW+FKNT L VQT+IL CTA+GLA+APMEGFDARR + L IPD YSIP+VV GYP ++D +E + I R + V F FG
Sbjct: 174 NAPEAWAFKNTMLFVQTFILGCTAHGLASAPMEGFDARRIKVCLGIPDHYSIPIVVPFGYP-----KNDSEEKTKKNIPTPRLDLKRVFFSNKFG 263
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A835Z5B9_9STRA (Nitroreductase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.180e-20 Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 VSAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFGVGMA 300
V++ EAW+FKNT LAV+ ++LA A GLAT PMEGFD R+ R IP RYS+P+VV GYP +R Q R+P E+V +D +G GMA
Sbjct: 162 VNSAEAWAFKNTMLAVEAFMLAAAANGLATCPMEGFDPRQLRKQFHIPRRYSVPVVVSIGYPKPSDRPLKQSR---------RFPPEQVFYDNQWGQGMA 252
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A6S8C805_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8C805_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.910e-20 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 1 VSAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPER 201
+++ E W+FKNT A QT+IL C AYGLATAPMEGFDARR R AL IPDRY IP+VV GYP E+
Sbjct: 206 INSSEGWAFKNTMTAAQTFILGCHAYGLATAPMEGFDARRIRDALYIPDRYEIPVVVSVGYPSEEEK 272
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A6T7ES08_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7ES08_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 3.310e-20 Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 10 VEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIP-DRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFGVGMAGID 309
VE+WS+KNTALA QTY LA ++GLAT MEG+D RR + L IP +RYSIP++V TGY E +K R P EEV FDG FGV ++ +D
Sbjct: 184 VESWSYKNTALAAQTYTLAAHSHGLATCMMEGYDNRRVQRLLQIPPERYSIPLIVATGYEYQNESLHSKKTPR--------LPLEEVFFDGTFGVPLSDLD 276
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A7S1UTI7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTI7_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.560e-20 Identity = 51/93 (54.84%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 10 VEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFG 288
V+AWS+KNTAL QTY+LA T++GLAT MEGFD RR + L IPDRY IPM+V TGY E E D + V R EEVVF FG
Sbjct: 68 VQAWSYKNTALMAQTYVLAATSHGLATCIMEGFDGRRAKEILQIPDRYEIPMMVATGY----EYEADDET--TVPPMTPRLDLEEVVFGETFG 154
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A0G4EQ18_VITBC (Nitroreductase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EQ18_VITBC) HSP 1 Score: 89.4 bits (220), Expect = 7.250e-19 Identity = 46/90 (51.11%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 4 SAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVF 273
S E W++KNT LAVQTY+L +AYGL TAPMEGFD R R L +PDR+S+P+VV TGYP D R + R P +E VF
Sbjct: 266 SMAETWAYKNTMLAVQTYMLLASAYGLGTAPMEGFDMVRLRRVLMLPDRFSVPLVVATGYPA------DAPISRTYPLLSGRLPMDEQVF 349
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A5D6YFF2_9STRA (Nitroreductase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFF2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 9.400e-19 Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 16 AWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRYSIPMVVCTGYPVAPEREDDQKEGRRVVIKRWRYPGEEVVFDGAFG 288
AW++K TA A T++ A A GLAT+ MEGFD R +AALDIPDRYSIP+VVC GYP Q E R R EV FDG FG
Sbjct: 182 AWAYKQTAFAAATFMFAAEASGLATSAMEGFDDARLKAALDIPDRYSIPVVVCCGYP--------QPEKLRTDSTTPRLAPTEVFFDGKFG 264
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Match: A0A4D9DF56_9STRA (Nitroreductase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF56_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 9.520e-19 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 1 VSAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIP-DRYSIPMVVCTGYPV-----APEREDDQKEGRRVVIKRWRYPGEEVVFDGAFGVGMAGI 306
VS +EAWS+KNTA+A Y+L+C+ +GL T PMEGFD RR L IP RY+IP+VV TG+ + +PER ++ K K R+P E VVF +G GI
Sbjct: 219 VSTLEAWSYKNTAIAASWYMLSCSVHGLDTCPMEGFDGRRIMHELHIPASRYAIPLVVSTGFAMPLPSSSPERNEEAK-------KSPRFPPEAVVFKDQYGHAYKGI 319 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47292.11839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47292.11839.1 >prot_H-elongata_contig47292.11839.1 ID=prot_H-elongata_contig47292.11839.1|Name=mRNA_H-elongata_contig47292.11839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp VSAVEAWSFKNTALAVQTYILACTAYGLATAPMEGFDARRFRAALDIPDRback to top mRNA from alignment at H-elongata_contig47292:269..1187+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47292.11839.1 ID=mRNA_H-elongata_contig47292.11839.1|Name=mRNA_H-elongata_contig47292.11839.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=919bp|location=Sequence derived from alignment at H-elongata_contig47292:269..1187+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47292:269..1187+ >mRNA_H-elongata_contig47292.11839.1 ID=mRNA_H-elongata_contig47292.11839.1|Name=mRNA_H-elongata_contig47292.11839.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=654bp|location=Sequence derived from alignment at H-elongata_contig47292:269..1187+ (Himanthalia elongata Himel1 dioecious)back to top |