mRNA_H-elongata_contig47194.11826.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47194.11826.1
Unique NamemRNA_H-elongata_contig47194.11826.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 7.660e-116
Identity = 238/398 (59.80%), Postives = 272/398 (68.34%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------ASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQEAVARARAREAEGVIRQ---CNEGKLDFQFEETTAVTGAGGGT---GTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVDPSEA 1167
            QEELE+I++TLGCNCRRLKILYLQNNIIG+M+NLHHMKELEYLNLA+XXXXXXXXXXXXXXXX      NFVD+DELE+SV  MEGN HL DLYMMGNPCQS W GFE Y +ARLPQLERLDGKEITRTDRI+A QRLP+LR+E+  LA+EVR+R                                         A + G     G    PSG D+  +  G      EEEELTKHTP  RTAIYREMAEQKREKEERQK+NLPKDRNFE+EQ  + R R   +E    +    +E KL+F+FEET A +   GG    G+GS G DIVL V+VP++LDSSL+DLD             VLRLSL AEVKA EAKARRSKTTGSLVVTMPKVDP ++
Sbjct:   31 QEELESIDDTLGCNCRRLKILYLQNNIIGKMQNLHHMKELEYLNLALXXXXXXXXXXXXXXXXKLDLTVNFVDMDELENSVSAMEGNRHLKDLYMMGNPCQS-WAGFEAYTIARLPQLERLDGKEITRTDRIKAQQRLPALRKEIPLLAQEVRQRKLAEKEAAKLESQEKHDGNNNSDNEHSRGGGVDADDHPTAPAKSDGATDQPGHDARPSGTDKSCDGKG------EEEELTKHTPEARTAIYREMAEQKREKEERQKENLPKDRNFELEQTRLPRWRGPASEKPRARSDSAHEAKLEFRFEETGAASSTPGGRVGRGSGSSG-DIVLEVAVPKHLDSSLMDLD-------------VLRLSLQAEVKAGEAKARRSKTTGSLVVTMPKVDPDQS 407          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A835Z7F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F5_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.600e-95
Identity = 180/377 (47.75%), Postives = 223/377 (59.15%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQEAVA-RARAREAEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVD 1155
            QEE+E IN+ LG NCR LKILYLQNNII +M+NLHH+KELEYLNLA+                      NF+DLD+L+ S++ +    +L DLYMMGNP Q++W GF  YV   L QLERLDG+EITR+ RI A Q+LP+L+ E  +                                           + L+  A                      EE T HTP VRT IYRE+AEQKREK+ERQ++NLPK+R+FE E +A   +AR RE EGV+RQCNEGKLDF F+E              S  G ++L ++VPRYLDSSLID+DVHPHY+SVVIKGKVLRL L  EV A  +KA+RSKTTG LV+ MPKV+
Sbjct:   31 QEEIERINDVLGKNCRHLKILYLQNNIINKMENLHHLKELEYLNLALNNITIIEGLGSCEMLNKLDLTVNFIDLDKLQESIEHLASCPNLKDLYMMGNPAQANWEGFAAYVTGILSQLERLDGREITRSMRITAQQQLPALKAEYQA-------------------------------------------QKLEQTA----------------------EETTPHTPEVRTQIYRELAEQKREKDERQRENLPKERDFEQEHKAATEKARQRELEGVVRQCNEGKLDFFFDEQ-------------SFHGHLLLDIAVPRYLDSSLIDVDVHPHYISVVIKGKVLRLQLPVEVLAGSSKAQRSKTTGHLVIYMPKVN 329          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A7S3HTQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ6_9STRA)

HSP 1 Score: 271 bits (694), Expect = 4.460e-83
Identity = 171/379 (45.12%), Postives = 227/379 (59.89%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQEAVARA-RAREAE--GVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVD 1155
            QEELE+INE LG  CR+LKILYLQNNII +M+NL HMK+L YLNLA+                      NF+DLDEL+ S+D ++  T+L+DLYMMGNP + +WP F+ YV+A+LPQL+ LDG EITR+ +I+A Q+LP+L  EL  LA  VR                                      S+   A   + +D  +EA G      + +E+T +TP  R  IY+E+A+QK+EKE+R   N PK RN+E EQE   +A R +EAE  G I+Q NEG  +F ++E T             R G +VL V V ++LDSSLID+DVHP YVS+VIK KVLRL L AEVK SE+K +R+K  G+L++ MPK+D
Sbjct:   54 QEELESINEVLGMTCRKLKILYLQNNIISKMENLFHMKDLVYLNLALNNVTKIEGLHNCEFLGKLDLTVNFIDLDELKDSIDHLQSRTNLHDLYMMGNPSEHNWPNFKHYVIAKLPQLQNLDGTEITRSMQIQARQKLPALEIELEKLASAVR---------------------TEKRAKAIITEQAKPAPSVTTYANGVTIEDVDEEAEGSND---QSQEMTDNTPETRVRIYQELAQQKKEKEDRANVNAPKKRNYEKEQEESIKAIRDKEAEEAGDIKQKNEGGWEFYWDEET-------------RPGMVVLEVRVQKFLDSSLIDVDVHPTYVSMVIKSKVLRLRLPAEVKVSESKCQRAKVNGALLIIMPKLD 395          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: F0YAK5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAK5_AURAN)

HSP 1 Score: 254 bits (649), Expect = 1.540e-78
Identity = 190/375 (50.67%), Postives = 226/375 (60.27%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQEAVARARA-REAEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPK 1149
            QEEL  I   LG  CR+LKILYLQNNII +M+NLHHMK+LEYLNLA XXXXXXXXXXXXXXXXXXXX  NFVD+D LE S+D +    HL DLYMMGNP Q  WPGF+ YVVARLPQL+ +DG+ ITR  RI A Q+LP L  EL  LA                                         ++ + +A +P         V  R    + +E   +TP VRT +Y E+AEQK EK+ +Q    PK+R               RE  G I+QCN+GK +F ++E              S+ G +VL V V R+LDSSLIDLDVHPHYVSVVIK K LRL+L AEVKAS+AKA+RSKTTG LVVTMPK
Sbjct:   27 QEELLAIAPCLGTICRKLKILYLQNNIISKMENLHHMKDLEYLNLAXXXXXXXXXXXXXXXXXXXXXTVNFVDVDALEESMDNLASRIHLRDLYMMGNPAQVDWPGFKNYVVARLPQLKFVDGEPITRGVRIVAEQQLPKLSVELRGLAAA---------------------------------------KAAEKKAKAP---------VDYR--DLDVDEAAPYTPEVRTKMYEEVAEQKAEKDHKQNAMKPKERXXXXXXXXXXXXXXEREERGAIQQCNQGKWEFHWDEE-------------SKPGFVVLDVHVQRHLDSSLIDLDVHPHYVSVVIKSKTLRLALPAEVKASDAKAQRSKTTGHLVVTMPK 338          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A7S4E455_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E455_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.350e-76
Identity = 166/378 (43.92%), Postives = 214/378 (56.61%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAP-SPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQ-EAVARARAREAEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVD 1155
            QEEL  I   LG  CR+LKILYLQNNII ++++LHH+K+LEYLN+A+                      NFVD+DELESS+D +    HL DLYMMGNPC+++WPGF+ YV+ARLPQL+ LDG+ ITR+ +I A Q+LP L  EL SLA+E R                                        D +AP +P  +        RR        L   T  VR  +Y E+AE+K EKE R+    P++R+   EQ + V R R RE EG I QCNEGK +F F+E +               G I+L + V R+LDSSLIDLD+HP YVSVVIK KVLRL L +EV AS + A+RSK TG L++ MPK++
Sbjct:   53 QEELVAIEPCLGTTCRKLKILYLQNNIISKIQHLHHLKDLEYLNMALNNVSKIEGLDKCEFLNKLDLTVNFVDVDELESSMDHLADREHLKDLYMMGNPCEANWPGFKNYVIARLPQLQFLDGEAITRSMQIIAKQQLPKLAVELRSLAQEKRDEKAQKEFVDYRDI------------------------DTDEKAPYTPEVRYAASFDASRR-------RLAIPTQ-VRLKMYEELAEEKAEKENRELRRQPRERDHAGEQRKKVERVRQREEEGKILQCNEGKWEFHFDEESVK-------------GSIILDLHVSRHLDSSLIDLDIHPAYVSVVIKSKVLRLKLPSEVNASLSTAKRSKVTGHLLIEMPKIN 385          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A024TNP9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNP9_9STRA)

HSP 1 Score: 238 bits (606), Expect = 9.740e-71
Identity = 171/379 (45.12%), Postives = 235/379 (62.01%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQ-EAVARARAREAEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVDPS 1161
            QEE+E I E +G  CR+L+ILYLQNNII ++++L HMK+L       XXXXXXXXXXXXXXXXXXXXXX F+D+DELE S++ ++   HL +L+M+GNP Q+ W  F  YV+A LPQL++LDGK+IT++DRI+A+Q+LP   +ELA+L    R R                                  G++ D      + +D  Q+            E   +TP  R  +Y E+AEQK E+E R++ NLP+DR++E E  +A+A AR  EAEG IRQCNEGK +F+ ++ T             + G +++ V VP++LDSSLI +D+HP YV++VIK KVLRL    EVK  +  A RSKTTG+L +T+ KVDPS
Sbjct:   30 QEEIEKI-EVIGTLCRKLRILYLQNNIIEKIEDLTHMKDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIDVDELEESINHLKPRVHLKELFMLGNPAQADWDNFSHYVIASLPQLQQLDGKDITKSDRIKALQKLPVFNRELAALIAAKRHRDAVDVIP------------------------VVSGKATDISHDDGATRDTNQD------------EKLPYTPQTRRHMYMELAEQKEEEEARKRSNLPRDRDYEREHHDALATARHVEAEGAIRQCNEGKWEFRMDDET-------------KPGFVLVEVGVPKFLDSSLIHVDMHPTYVTIVIKNKVLRLRFPEEVKCDQGTALRSKTTGALQLTVEKVDPS 358          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A6A4ZVD5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZVD5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.900e-69
Identity = 172/380 (45.26%), Postives = 232/380 (61.05%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQ-EAVARARAREAEGV-IRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVDPS 1161
            QEE+E I E +G  CR+L+ILYLQNNII ++++L HMK+L       XXXXXXXXXXXXXXXXXX    NF+D+D LE S++ ++   HL +LYM+GNP QS W  F  YV+A LP+LE LDGKEIT++DRI+A+Q+ P L++EL +L  + +                                       +DG A   S   + Q A G        +E   +TP  R  +Y E+AEQK E+E R++ NLPK+R++E E  E +A+AR  E +GV IRQCNEGK +F+ +E T             + G I+L VSVP+YLDSSLI++DVHP YVS++IK K+LRL    EV     KA RSKTTG+L +++ KVDP+
Sbjct:   10 QEEIEKI-EVIGTLCRKLRILYLQNNIIEKIEDLTHMKDLXXXXXXXXXXXXXXXXXXXXXXXXXDLTVNFIDVDALEESINHLKPLVHLKELYMLGNPAQSDWENFNAYVIASLPRLELLDGKEITKSDRIKAMQQFPILQKELRALVVQKKAMDMADMDVIPV---------------------------VDGTATDIS---DNQTADG--------DEKLPYTPDTRRNMYLEIAEQKEEEEARKRTNLPKERDYEREHAETLAKARRMEGDGVEIRQCNEGKWEFKMDEIT-------------KPGFILLEVSVPKYLDSSLINVDVHPTYVSILIKNKLLRLRFPEEVHCGNGKALRSKTTGALQLSVEKVDPA 337          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A6A3PCZ5_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PCZ5_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.530e-69
Identity = 151/368 (41.03%), Postives = 203/368 (55.16%), Query Frame = 1
Query:   58 LGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWP-GFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIE-QEAVARARARE--AEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPK 1149
            +G  CR+L+ILYLQNNII +M++L HMKEL YLN+A+                      NFVD D LE S+D ++   HL +LYM+GNPCQ++W  GF  +VVA LPQLE LDGKEI R+DRI+A+Q     ++ + S AK+VR +                                 GGE+ D        K +   A   +VP         +TP  R  +Y EMAEQK E+E R+++N PK+RN E E +EA+ +AR  E   +G IRQCNEGK +F+  +                  D++L V +PR+LDSSL+D+DVHP YVS+V K KVLRL     V +   KA RSK TG+L +T+PK
Sbjct:    1 IGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNIRKIEGLQSCEFLNKLDLTVNFVDFDTLEESIDHLKPLRHLRELYMLGNPCQANWETGFREFVVASLPQLENLDGKEIHRSDRIKALQVFRDRQKFVRSEAKKVRAKKELERKEDKESEVI----------------EVVGGEATDISEEQMEKKKKSVMASTEKVP---------YTPHTRREMYLEMAEQKEEEEARRRENQPKERNTEAEHEEALRKARVLEERGDGAIRQCNEGKWEFRLTDEIL---------------DVILEVDLPRFLDSSLVDVDVHPSYVSIVAKNKVLRLKFPELVHSDAGKAERSKITGTLRLTLPK 328          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A3R7GRH2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GRH2_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.400e-68
Identity = 172/378 (45.50%), Postives = 225/378 (59.52%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWP-GFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIE-QEAVARARARE--AEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPK 1149
            QEELE I E +G  CR+L+ILYLQNNII ++++L HMKEL YLNLA XXXXXXXXXXXXXXXXXX    NFVD D LE S+D ++   HL +LYM+GNPCQS+W  GF  YV+A L QLE LDGKEI R+DRI+A+Q     ++ +   AK++  +                                   E + GEA   S KD  +     +       E   +TP  R  +Y EMAEQK E+E R+++N P++RN E E +EA+  AR++E  A+G IRQCNEGK  F+  +                  D++L V +PR+LD+SL+D+DVHP YVS+V K KVLRL     V +   KA RSK TG+L +T+PK
Sbjct:   30 QEELERI-EVIGTLCRKLQILYLQNNIIEKIEDLAHMKELRYLNLAXXXXXXXXXXXXXXXXXXXDLTVNFVDFDTLEESIDHLKPLQHLRELYMLGNPCQSNWETGFREYVIASLAQLELLDGKEIQRSDRIKALQVFRERQKYVRREAKKILAKNALEREQEVTKNSADDDGVI---------------EVVGGEATDVSSKDTAKSTEKTKPSVMASTEKVPYTPHTRREMYLEMAEQKEEEEARRRENQPRERNTEAEHEEALHHARSKEEHADGSIRQCNEGKWKFRLTDEIL---------------DLILEVDLPRFLDTSLVDVDVHPSYVSIVAKNKVLRLKFPELVHSDAGKAERSKITGTLRLTLPK 376          
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.510e-68
Identity = 168/378 (44.44%), Postives = 221/378 (58.47%), Query Frame = 1
Query:   28 QEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAVXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSVDEMEGNTHLNDLYMMGNPCQSSWP-GFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSLRQELASLAKEVRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTGGESLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQKREKEERQKDNLPKDRNFEIEQ-EAVARARARE--AEGVIRQCNEGKLDFQFEETTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKGKVLRLSLLAEVKASEAKARRSKTTGSLVVTMPK 1149
            QEELE I E +G  CR+L+ILYLQNNII +M++L HMKEL YLNLA+                      NFVD D LE S+D ++   HL +LYM+GNPCQS W  GF  YV+A LPQL+ LDGKEI R+DRI+A+Q     +Q +   AK+V  R XXXXXXXXXXXXX               +S    E +D +      K +   A   +VP         +TP  R  +Y EMAEQK E+E R+++N P++RN E E  EA+ +AR +E  A+G IRQCNEGK +F+  +                  D++L V +PR+LD+SL+D+DVHP YVS+V K K+LRL     V +    A RSK TG+L +T+PK
Sbjct:   30 QEELEKI-EVIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKIEGLQCCEFLNKLDLTVNFVDFDTLEDSIDHLKPLQHLRELYMLGNPCQSDWETGFREYVIASLPQLQLLDGKEIQRSDRIKALQVFRVRQQYVRKEAKKVLDRKXXXXXXXXXXXXXEDEAIEIVSGEATDISSVEVVEEVDSQ--HSKNKKKSVMASKEKVP---------YTPHTRREMYMEMAEQKEEEEARRRENQPRERNTEAEHDEALRQARQQEERADGSIRQCNEGKWEFRLMDEIL---------------DVILEVDLPRFLDTSLVDVDVHPSYVSIVAKNKILRLKFPELVHSDAGTAERSKITGTLRLTLPK 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47194.11826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT33_ECTSI7.660e-11659.80Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z7F5_9STRA2.600e-9547.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3HTQ6_9STRA4.460e-8345.12Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0YAK5_AURAN1.540e-7850.67Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4E455_9STRA2.350e-7643.92Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A024TNP9_9STRA9.740e-7145.12Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A6A4ZVD5_9STRA1.900e-6945.26Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A3PCZ5_9STRA2.530e-6941.03Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A3R7GRH2_9STRA1.400e-6845.50Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A662WUB0_9STRA2.510e-6844.44Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47194contigH-elongata_contig47194:422..3983 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.8
Seed ortholog evalue1.6e-96
Seed eggNOG ortholog2880.D7FT33
KEGG koko:K19753
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons6
Model size1167
Cds size1167
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47194.11826.1prot_H-elongata_contig47194.11826.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47194 422..3983 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930778.8725536-CDS-H-elongata_contig47194:421..5351622930778.8725536-CDS-H-elongata_contig47194:421..535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 422..535 -
1691679566.2504442-CDS-H-elongata_contig47194:421..5351691679566.2504442-CDS-H-elongata_contig47194:421..535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 422..535 -
1622930778.8891122-CDS-H-elongata_contig47194:807..10471622930778.8891122-CDS-H-elongata_contig47194:807..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 808..1047 -
1691679566.2713466-CDS-H-elongata_contig47194:807..10471691679566.2713466-CDS-H-elongata_contig47194:807..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 808..1047 -
1622930778.9072058-CDS-H-elongata_contig47194:1606..19391622930778.9072058-CDS-H-elongata_contig47194:1606..1939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 1607..1939 -
1691679566.2815006-CDS-H-elongata_contig47194:1606..19391691679566.2815006-CDS-H-elongata_contig47194:1606..1939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 1607..1939 -
1622930778.9235883-CDS-H-elongata_contig47194:2490..26401622930778.9235883-CDS-H-elongata_contig47194:2490..2640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 2491..2640 -
1691679566.2927814-CDS-H-elongata_contig47194:2490..26401691679566.2927814-CDS-H-elongata_contig47194:2490..2640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 2491..2640 -
1622930778.9432197-CDS-H-elongata_contig47194:3148..32951622930778.9432197-CDS-H-elongata_contig47194:3148..3295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 3149..3295 -
1691679566.302333-CDS-H-elongata_contig47194:3148..32951691679566.302333-CDS-H-elongata_contig47194:3148..3295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 3149..3295 -
1622930778.9619815-CDS-H-elongata_contig47194:3800..39831622930778.9619815-CDS-H-elongata_contig47194:3800..3983Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 3801..3983 -
1691679566.3118396-CDS-H-elongata_contig47194:3800..39831691679566.3118396-CDS-H-elongata_contig47194:3800..3983Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47194 3801..3983 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47194.11826.1

>prot_H-elongata_contig47194.11826.1 ID=prot_H-elongata_contig47194.11826.1|Name=mRNA_H-elongata_contig47194.11826.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=389bp
MLLGAVVPIQEELETINETLGCNCRRLKILYLQNNIIGEMKNLHHMKELE
YLNLAVNNITKVQGLHSCEFLNKLDLTVNFVDLDELESSVDEMEGNTHLN
DLYMMGNPCQSSWPGFELYVVARLPQLERLDGKEITRTDRIRAVQRLPSL
RQELASLAKEVRRRKRDEEDAAACDAPNEPSRSSSSSAAGAAKASTTGGE
SLDGEAPSPSGKDEGQEAVGRRVPGKEEEELTKHTPGVRTAIYREMAEQK
REKEERQKDNLPKDRNFEIEQEAVARARAREAEGVIRQCNEGKLDFQFEE
TTAVTGAGGGTGTGSRGGDIVLSVSVPRYLDSSLIDLDVHPHYVSVVIKG
KVLRLSLLAEVKASEAKARRSKTTGSLVVTMPKVDPSEA
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mRNA from alignment at H-elongata_contig47194:422..3983-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47194.11826.1 ID=mRNA_H-elongata_contig47194.11826.1|Name=mRNA_H-elongata_contig47194.11826.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3562bp|location=Sequence derived from alignment at H-elongata_contig47194:422..3983- (Himanthalia elongata Himel1 dioecious)
ATGCTGCTCGGTGCGGTGGTGCCCATCCAGGAAGAGTTGGAAACCATCAA CGAGACCCTCGGCTGCAACTGCCGGCGGCTCAAGATCCTTTACCTCCAAA ACAACATAATCGGGGAGATGAAGAACCTTCACCACATGAAAGAGCTCGAG TACCTTAACCTCGCAGTCAACAATATCACAAAGGTAATCCCCGTGTTGTC GGTGATCAAGCAGCTGCGCGATCTGGGCACATCGTTGAAATAATTCTGGA CATCACGCGTGGGCGATGAGCACATGTATGCCTCTTGACGAATCGCGTTA GTAAGCGACGAAACACTTTTAACAGATACAGTCGTTGTTGATGCTTTACG GCGAGCGTGTGTTATTGTTCTTTTTTATTGGCGCATTGGCGGTCCTCAAC GCGACCCACTAGTCAGTGATGACCCACCGATAAGATCAATGATCATTTCA TCACCCTAACCTCAACCGCGCCGATCGAAGTTATGGTGGTACTTTTTCGA CGAAAATATTTGCGACGTCCAAACATCCATCCATAGGAGGAACAGTGATG CCACAGGAACTGCCCGCTGCTTTAGTAAACCATGCCCCGCAAGCCCGCTG CTTGCACAATAGTCACCTCGCTGTTTTTTGTTATGGGGTTTGCGATGGGA TGATGGGATACCTCGCTGGTCGGTAAAACGACATCTAGGTGCAGGGCCTG CACTCTTGCGAGTTCCTCAACAAGCTAGATCTCACGGTCAACTTCGTGGA CCTCGACGAGTTGGAGAGCAGCGTGGACGAAATGGAGGGAAACACACATC TGAACGACCTCTACATGATGGGAAACCCTTGCCAGGTACAAGCACACAGG CACGAAAAGTAGTGATGATATCTACGATAATTGGGATCAGAACTCCCCCC CCCCAGCCTTTGCCCCCACCCCCCACCCCCACAATACAGGCGGTCCGGAC ACCGCAATTTAGTCTTTTTTAAGACACCATTGCGATATACTCCTAGATCC ACTGTGTTGACATCGCTGTATGGGTAGATGTCAAGCGGACGACACCGATC AACCATCCCCCATCCCCAGAGGAGGGAGGGGGGGAGTGGGAGGGCGTACT CAAGTTTGCATGCCTTAGCTGTGAGACCGTTGACCACATGTCTTTGGAAG GGGGGGGGTGTTATCCCCTATCAGCTGCCAACATTTTGTCAACTGCGCGA AGCCTCCTCGCTACCTGGGTCATCGCCGCCATGTGATGTATCGCGTGGCA TTTGATGACTGACTCCCCCCCCCTCTTCCTGAAGCCATACTTCTCCATTT TCCGTTGATAACCACCCACCCACCCATCGATCTGCTGCTGCAGTCATCTT GGCCAGGTTTCGAGCTGTATGTGGTCGCTCGCCTGCCCCAATTGGAGCGC CTGGACGGTAAGGAGATCACTCGAACCGATCGCATACGAGCCGTGCAGCG TCTCCCTTCGCTGCGTCAAGAGCTCGCCTCCCTCGCCAAGGAGGTACGTG CAGCTAAGGCTGTTGTCGCGTGACGTTTGCAACAGTTGTGACGTCGTGCT CTCCGCGGAGCCATCGCACCGATCTCGTACACGCGAGGCGTGCGGGGTGT GTTCAAACTGGATACGGGCGCCCATTTCCTCGGCAACATCCTCGACGTTC CGGCGGGAGCATTTTCATCCGAAGGATGAACGCGGGTGTCGCCGTCCGCC GTGCGATATTTTGCTATGTGGGGAGTTACAGTCAAAATCGTATTTGATTA TGTGTTGCACCATGCGGTGTGCGTTTAATACGCGAGAGTGTACGTTTAAT ACGCGATAGAGTATTTGTTCACGCTTGGAGTCACCACCCCCAAATACTAC CATTTGTATTTACCCCTACCCAAAGATACTTAAAACAATAGTAATACATC GGCATATACGTATATATATATATGTATATATTGCTGCAAAACGATCGTGA GTTCAGTGCGTTGGCCTAGTTCCTTCTCTCCTTTTCCTCCTCTTGAGAGA TCCGTAGTTTTACCGCGCCGTGTGAATACTTGCCGATACTGTAGGTGAGA CGGCGAAAACGCGACGAGGAGGACGCTGCCGCGTGCGACGCTCCTAACGA ACCATCACGCTCGAGTTCGTCGTCTGCAGCCGGTGCGGCTAAGGCTTCAA CCACGGGTGGGGAAAGCCTCGACGGAGAGGCTCCTTCACCCAGTGGAAAG GACGAGGGACAAGAGGCCGTCGGCCGCCGGGTCCCCGGGAAAGAAGAGGA GGAGCTGACGAAGCACACGCCGGGGGTCCGAACGGCGATCTATCGTGAGA TGGCGGAGCAGAAGAGGGAGAAAGAAGAACGACAGAAAGATAATCTACCC AAGGATAGGAACTTCGAAATCGAGCAGGTGCGTGCAGAGGCCGGGGGCAG GGGGTGGGTACTGGGAGAGGCTGGGGGAATATAGGCCACATGGTTAAGCT TAGGGGCATTAATGACATTGCTGTAGGCGCAATGAGTGAGTCACCCCACA CTACCCCCTTCGCTGCCCGGAGCTATGTTCGGCCATGAAATTATGGTGGA GTCCCGAGGTCGTACGCTTCCGAGGGAGTTTTCGTGGCACGACACGCCTC CCGCCCACCGTTTGTTAATTAGTCGTTCAGGTGAACTAAAGCTGTGCTAT GAATTGCAAAGCAGCCATAACGGTAGGGCACCTATAAAGAGGGAGTTCCG CTGCGCTCCTCGAGAAAACATTACATCTCGCGGGCCTACGCTGTGCGATG CACGCCTGTGGGTGCATCGTGGATTAAGTTGTGGATTCGATGCCACGCTT TGCATCCTTCAACCCACACACGAGGTCCTGTGTGACGTCAATTTGAGAGC CCTTTTGATCCCTCTGTTACAAGTGGTGGGGCTACTACTGCTGTTGTGTG CTATACCACGAACTGTTGTACTGTCCGTGCAAGGAGGAAGCGGTGGCGCG GGCGCGGGCGAGAGAAGCCGAAGGGGTGATCAGGCAGTGCAACGAGGGGA AGCTCGATTTTCAGTTTGAGGAGACCACCGCCGTGACCGGGGCCGGGGGC GGGACCGGGACCGGCAGCAGGGGGGGCGACATCGTACTCTCGGTGTCGGT ACCACGGTACTTGGACAGCTCATTGATCGACCTTGACGTGCACCCGCACT ACGTCAGCGTCGTGATCAAGGGCAAGGTACTCTCGATGAAACAGGATACG ATAACATGCGAGAACTTTGTCCTGCGCTGCAGCGAGCACCTGGAACTGTA GCTGGTGGGGGGCGGGGGAAGGAGAACGGTGTTTAATGTCTAGTTGCTCT GAAGCCTCCCCCGATGTTGATGTCGGAGAGGCGTGGCGCCGACGGCGTGT GTGCCATGTGCAAGGCGATGTCATGCGATGCCCCACTGGGTCAGGTTGAC TTTCATCCCGACATCTTTATCCTCCCGCCATCGCCTGTGTTGCCCCAGGT GCTGCGTCTCAGCCTGCTGGCGGAGGTCAAGGCGAGCGAGGCTAAGGCGC GAAGGAGCAAGACAACGGGAAGTCTCGTGGTTACCATGCCCAAGGTCGAC CCCTCGGAGGCA
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Coding sequence (CDS) from alignment at H-elongata_contig47194:422..3983-

>mRNA_H-elongata_contig47194.11826.1 ID=mRNA_H-elongata_contig47194.11826.1|Name=mRNA_H-elongata_contig47194.11826.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2334bp|location=Sequence derived from alignment at H-elongata_contig47194:422..3983- (Himanthalia elongata Himel1 dioecious)
ATGCTGCTCGGTGCGGTGGTGCCCATCCAGGAAGAGTTGGAAACCATCAA
CGAGACCCTCGGCTGCAACTGCCGGCGGCTCAAGATCCTTTACCTCCAAA
ACAACATAATCGGGGAGATGAAGAACCTTCACCACATGAAAGAGCTCGAG
TACCTTAACCTCGCAGTCAACAATATCACAAAGATGCTGCTCGGTGCGGT
GGTGCCCATCCAGGAAGAGTTGGAAACCATCAACGAGACCCTCGGCTGCA
ACTGCCGGCGGCTCAAGATCCTTTACCTCCAAAACAACATAATCGGGGAG
ATGAAGAACCTTCACCACATGAAAGAGCTCGAGTACCTTAACCTCGCAGT
CAACAATATCACAAAGGTGCAGGGCCTGCACTCTTGCGAGTTCCTCAACA
AGCTAGATCTCACGGTCAACTTCGTGGACCTCGACGAGTTGGAGAGCAGC
GTGGACGAAATGGAGGGAAACACACATCTGAACGACCTCTACATGATGGG
AAACCCTTGCCAGGTGCAGGGCCTGCACTCTTGCGAGTTCCTCAACAAGC
TAGATCTCACGGTCAACTTCGTGGACCTCGACGAGTTGGAGAGCAGCGTG
GACGAAATGGAGGGAAACACACATCTGAACGACCTCTACATGATGGGAAA
CCCTTGCCAGTCATCTTGGCCAGGTTTCGAGCTGTATGTGGTCGCTCGCC
TGCCCCAATTGGAGCGCCTGGACGGTAAGGAGATCACTCGAACCGATCGC
ATACGAGCCGTGCAGCGTCTCCCTTCGCTGCGTCAAGAGCTCGCCTCCCT
CGCCAAGGAGTCATCTTGGCCAGGTTTCGAGCTGTATGTGGTCGCTCGCC
TGCCCCAATTGGAGCGCCTGGACGGTAAGGAGATCACTCGAACCGATCGC
ATACGAGCCGTGCAGCGTCTCCCTTCGCTGCGTCAAGAGCTCGCCTCCCT
CGCCAAGGAGGTGAGACGGCGAAAACGCGACGAGGAGGACGCTGCCGCGT
GCGACGCTCCTAACGAACCATCACGCTCGAGTTCGTCGTCTGCAGCCGGT
GCGGCTAAGGCTTCAACCACGGGTGGGGAAAGCCTCGACGGAGAGGCTCC
TTCACCCAGTGGAAAGGACGAGGGACAAGAGGCCGTCGGCCGCCGGGTCC
CCGGGAAAGAAGAGGAGGAGCTGACGAAGCACACGCCGGGGGTCCGAACG
GCGATCTATCGTGAGATGGCGGAGCAGAAGAGGGAGAAAGAAGAACGACA
GAAAGATAATCTACCCAAGGATAGGAACTTCGAAATCGAGCAGGTGAGAC
GGCGAAAACGCGACGAGGAGGACGCTGCCGCGTGCGACGCTCCTAACGAA
CCATCACGCTCGAGTTCGTCGTCTGCAGCCGGTGCGGCTAAGGCTTCAAC
CACGGGTGGGGAAAGCCTCGACGGAGAGGCTCCTTCACCCAGTGGAAAGG
ACGAGGGACAAGAGGCCGTCGGCCGCCGGGTCCCCGGGAAAGAAGAGGAG
GAGCTGACGAAGCACACGCCGGGGGTCCGAACGGCGATCTATCGTGAGAT
GGCGGAGCAGAAGAGGGAGAAAGAAGAACGACAGAAAGATAATCTACCCA
AGGATAGGAACTTCGAAATCGAGCAGGAAGCGGTGGCGCGGGCGCGGGCG
AGAGAAGCCGAAGGGGTGATCAGGCAGTGCAACGAGGGGAAGCTCGATTT
TCAGTTTGAGGAGACCACCGCCGTGACCGGGGCCGGGGGCGGGACCGGGA
CCGGCAGCAGGGGGGGCGACATCGTACTCTCGGTGTCGGTACCACGGTAC
TTGGACAGCTCATTGATCGACCTTGACGTGCACCCGCACTACGTCAGCGT
CGTGATCAAGGGCAAGGAAGCGGTGGCGCGGGCGCGGGCGAGAGAAGCCG
AAGGGGTGATCAGGCAGTGCAACGAGGGGAAGCTCGATTTTCAGTTTGAG
GAGACCACCGCCGTGACCGGGGCCGGGGGCGGGACCGGGACCGGCAGCAG
GGGGGGCGACATCGTACTCTCGGTGTCGGTACCACGGTACTTGGACAGCT
CATTGATCGACCTTGACGTGCACCCGCACTACGTCAGCGTCGTGATCAAG
GGCAAGGTGCTGCGTCTCAGCCTGCTGGCGGAGGTCAAGGCGAGCGAGGC
TAAGGCGCGAAGGAGCAAGACAACGGGAAGTCTCGTGGTTACCATGCCCA
AGGTCGACCCCTCGGAGGCAGTGCTGCGTCTCAGCCTGCTGGCGGAGGTC
AAGGCGAGCGAGGCTAAGGCGCGAAGGAGCAAGACAACGGGAAGTCTCGT
GGTTACCATGCCCAAGGTCGACCCCTCGGAGGCA
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