mRNA_H-elongata_contig47098.11811.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47098.11811.1
Unique NamemRNA_H-elongata_contig47098.11811.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 7.390e-131
Identity = 288/408 (70.59%), Postives = 305/408 (74.75%), Query Frame = 1 
Query:    1 SASVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRSSLSFDELAAWYTSEGYKVSPWLELLDLNKWAVGAASHSGPNGGLRRSNGSALRSAEQRKPMVPPGKPLIAEPKPPSTAATNXXXXXXXXXXXXXXXXEGVSGNDGAGGTGSGVAAREADASVSGGRTAGXXXXXSAGRVNGVVDVVGRXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNGDVGGG----GTGAAGQGVAADSSSPTSQVLFTFPLVPDVELLVMQEDVDFVQRVVVGTRLAALLPQDILETFRGKATPGPRGKEVTKAAFDEGMQELVRLQSMLEDERDLLSFALANIFFAYDRDQSERVLLR 1212
            SAS DARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQL+R+ VWRFLRSLLSILMGFS ACQAK Q+KV E+V+S+AAW+SNLIFQSPNLV R SLSFDELAAWYT EGYKV+PWLELLDLNKWAVGA  ++ P GG    NG  +R   Q K MVPPGKPLIAEPKPP+     XXXXXXXXXXXXXXXX                     ++    GR  G  XXX   +  G       X     XXXXXXXXXXXXXXXXXXXXX        G      G  G G     S+PTSQVLFTFPLVPDVELLVMQEDVDFVQR+VVGTRLAALLPQDILETFR KAT GPRGKEVTK AFD GMQELVRLQSMLEDERDLLSFALANIFFAYDR Q  RVLLR
Sbjct:  401 SASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLTREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWSSNLIFQSPNLVMRDSLSFDELAAWYTQEGYKVAPWLELLDLNKWAVGATGNA-PGGGRSGGNGPQMRQHAQPKTMVPPGKPLIAEPKPPTXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXNSXXXAGRNVGSAXXXXXXQAAGXXXXXXXXGQSALXXXXXXXXXXXXXXXXXXXXXXAGMKESNGLNERPAGGEGAGEFDGGSNPTSQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKATSGPRGKEVTKEAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRMQEGRVLLR 796
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 1.240e-126
Identity = 277/420 (65.95%), Postives = 294/420 (70.00%), Query Frame = 1 
Query:    1 SASVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRSSLSFDELAAWYTSEGYKVSPWLELLDLNKWAVGAASHSGPNGGLRRSNGSALRSAEQRKPMVPPGKPLIAEPKPPSTAATNXXXXXXXXXXXXXXXXEGVSGNDGAGGTGSGVAAREADA----------------SVSGGRTAGXXXXXSAGRVNGVVDVVGRXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNGDVGGGGTGAAGQGVAADSSSPTSQVLFTFPLVPDVELLVMQEDVDFVQRVVVGTRLAALLPQDILETFRGKATPGPRGKEVTKAAFDEGMQELVRLQSMLEDERDLLSFALANIFFAYDRDQSERVLLR 1212
            SAS DARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSR+ VWRFLRSLLSILMGFS ACQAK Q+KV E+V+S+AAWTSNLIFQSP LV R+SLSFDELAAWYT EGYKV+PWLELLDLNKWAVGA  ++ P GG    NG  +R   Q K MVPPGKPLIAEPKPP+     XXXXXXXXXXXXXXXX                                         + G++A      +AG   G       XXXXXXXXXXXX                  GD  GG             S+PTSQVLFTFPLVPDVELLVMQEDVDFVQR+VVGTRLAALLPQDILETFR KAT GPRGKEVTK AFD GMQELVRLQSMLEDERDLLSFALANIFFAYDR Q  RVLLR
Sbjct:  404 SASADARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSREGVWRFLRSLLSILMGFSGACQAKSQAKVVEDVDSIAAWTSNLIFQSPKLVMRASLSFDELAAWYTHEGYKVAPWLELLDLNKWAVGAMGNA-PGGGRGGGNGPQMRQHVQPKTMVPPGKPLIAEPKPPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAATGQSALTAYGEAAG-TKGXXXXXXXXXXXXXXXXXXXCMKESNGLNERPAGGESAGDFDGG-------------SNPTSQVLFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKATSGPRGKEVTKEAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRMQEGRVLLR 808
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK)

HSP 1 Score: 137 bits (345), Expect = 9.320e-35
Identity = 65/126 (51.59%), Postives = 90/126 (71.43%), Query Frame = 1 
Query:    1 SASVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRSSLSFDELAAWYTSEGYKVSPWLELLDLNKW 378
            S+ VD  +   GF LLC+GNKS KLA AF LLDEDGD +LSR  +WRFLR+ LS+LM  S+   + + S++ + +++ A WT+  IF+  +L  ++ + F+ELAAWYT  GY++SPWLELLDL KW
Sbjct:   84 SSQVDVLEFMGGFALLCAGNKSGKLAYAFDLLDEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWYTEGGYRLSPWLELLDLKKW 209
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A7S3Y3W7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W7_HETAK)

HSP 1 Score: 104 bits (259), Expect = 4.020e-22
Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = 1 
Query:   10 VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIF--QSPNLVTRSS--------LSFDELAAWYTSEGYKVSPWLELLDLNKW 378
            VD  +  +GF L C+G+KSVKLA AF LLDE     L+R  VWRF RS+LS+L    ++       ++   V+  A WT+   F  + P     +         LSFD+LAAWYT  GY+V PWLELLDL KW
Sbjct:   38 VDVLEFIAGFVLFCAGSKSVKLAYAFELLDEQSLGYLTRRGVWRFFRSILSMLAALCSSLLDVPTEELQARVDDGAVWTTARAFSYRGPPAAAAAPERERDPNRLSFDDLAAWYTGGGYQVCPWLELLDLRKW 170
[Close]
BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A812UYR4_SYMMI (Calmodulin (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UYR4_SYMMI)

HSP 1 Score: 107 bits (267), Expect = 9.260e-22
Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 1 
Query:   10 VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRS---SLSFDELAAWYTSEGYKVSPWLELLDLNKW 378
            VDA ++A G  +LCSG+KS KLASAF LLDE+    LSR  +W+F RS L  L+  S A Q     ++    +  A +  + +  SP    +    + +FD++A WYTS GY+++PWLELLD+ KW
Sbjct:  363 VDAMEVAVGLSILCSGSKSSKLASAFELLDENKSGLLSRWRLWKFFRSFLCTLLTLSGAAQELSSDEITRVADGTALFACDSVLTSPTTTEKEDQYAATFDDIADWYTSAGYRIAPWLELLDMTKW 488
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.100e-19
Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 1 
Query:   10 VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIF---QSPNLVTRSSLSFDELAAWYT-------SEGYKVSPWLELLDLNKW--AVGAA 393
            VDA +LA+GF +LC GNKS KL  A+ LL  D D  L+R  +WR++RS L++LM  S+A       ++   V+  A W S  +F   ++ +  TR  ++F +LA WYT       + G+  SPWLELLD++KW  A+G A
Sbjct:  140 VDALELATGFSILCGGNKSSKLVYAWDLL-ADADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVFADLRAADAATR--ITFTDLADWYTEGLERSAAPGFMTSPWLELLDMSKWGAALGGA 276
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A418DM36_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DM36_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.320e-15
Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 1 
Query:   10 VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRSSLSFDELAAWYTSEGYKVSPWLELLDLNKW 378
            VDA +LA+GF L C+G+KS KLA+ F   D D    L+RD +WRFLRS L I++G      +   S V +E+++ A        +    V  ++ SFDE   WY   G+    WLELLDL KW
Sbjct:  338 VDAFELAAGFALFCAGSKSDKLAAGFHFFDTDDTGTLTRDQLWRFLRSSLVIMVGLVPPTLSSSSS-VLDEIDAAAV-------EIMQHVDDATYSFDEFGHWYNDGGFHTMSWLELLDLKKW 452
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A7S3L262_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L262_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.290e-14
Identity = 49/137 (35.77%), Postives = 78/137 (56.93%), Query Frame = 1 
Query:   10 VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFS-----------TACQAKQQSKVAEEVNSVAAWTSNLIFQ----SPNLVTRSSLSFDELAAWYTSEGYKVSPWLELLDLNK 375
            VD ++ + GF   C+GNKS KLA+ F +LD+     LS++ + R+L S L++L+  S           T     ++ K+ E V S + WT +   +    +     + S SF++ A+WY+S GY+V+PWLELLDL+K
Sbjct:  505 VDLQEFSVGFCFFCAGNKSSKLATGFEMLDDKRKSSLSQEELLRYLNSYLTMLVAMSLLKPITQRNMPTKLSDAKRQKLREAVESGSRWTLSHFVKHLGDNDFEARKDSYSFEKFASWYSSGGYEVAPWLELLDLSK 641
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A1V9Z3F3_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3F3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.900e-14
Identity = 48/129 (37.21%), Postives = 74/129 (57.36%), Query Frame = 1 
Query:    7 SVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRSSLSFDELAAWYTSEGYKVSPWLELLDLNKWAVGAA 393
            SVDA +LA GF + C G+KS KL+S +R  D D    L++  +WRFLRS++ +++  S + +A   S +   V+S A+   +   +        + +FDE   WY   GY++  WLELLDL KW+  +A
Sbjct:  575 SVDAYELAGGFSIFCFGSKSDKLSSGYRYFDTDEMGFLTKGQLWRFLRSVIIMILSLSASNKAITTS-IMSFVDSAASTVLDAFAEQ-------TYTFDEFGQWYNQGGYQIVSWLELLDLKKWSFVSA 695
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BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Match: A0A7S2K2V1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2V1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.260e-12
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 1 
Query:   10 VDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLRSLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVT--RSSLSFDELAAWYTSEGYKVSPWLELLDLNKWAV 384
            V +  LA G  LLC G KS KLA +F+L   DG   L  + ++ FLRS L +L     +C A+     A++V++    T+ +  +     T  +  + F +   WY   GY+ +PWLELLDL KWA+
Sbjct:  319 VPSNQLAGGLTLLCDGRKSHKLAFSFQLFSGDGMSPLKSEDLFYFLRSFLIVLF----SCCAQSLELTADQVSAWVTDTAKMCCRDVMHHTSRKECVDFGDFGEWYNGGGYETAPWLELLDLGKWAL 441
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47098.11811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FUX5_ECTSI7.390e-13170.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYX4_9PHAE1.240e-12665.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMH2_HETAK9.320e-3551.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y3W7_HETAK4.020e-2244.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812UYR4_SYMMI9.260e-2242.86Calmodulin (Fragment) n=1 Tax=Symbiodinium microad... [more]
A0A836CCD1_9STRA3.100e-1941.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A418DM36_9STRA1.320e-1541.46Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A7S3L262_9STRA5.290e-1435.77Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1V9Z3F3_9STRA6.900e-1437.21EF-hand domain-containing protein (Fragment) n=1 T... [more]
A0A7S2K2V1_9STRA7.260e-1236.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47098contigH-elongata_contig47098:385..3938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score420.6
Seed ortholog evalue8.1e-115
Seed eggNOG ortholog2880.D7FUX5
EggNOG OGs2CU92@1,2RK0N@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_008550.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1212
Cds size1212
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930776.8540962-CDS-H-elongata_contig47098:384..5331622930776.8540962-CDS-H-elongata_contig47098:384..533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 385..533 +
1691679565.457266-CDS-H-elongata_contig47098:384..5331691679565.457266-CDS-H-elongata_contig47098:384..533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 385..533 +
1622930776.86595-CDS-H-elongata_contig47098:1255..13701622930776.86595-CDS-H-elongata_contig47098:1255..1370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 1256..1370 +
1691679565.4756093-CDS-H-elongata_contig47098:1255..13701691679565.4756093-CDS-H-elongata_contig47098:1255..1370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 1256..1370 +
1622930776.880315-CDS-H-elongata_contig47098:1606..17661622930776.880315-CDS-H-elongata_contig47098:1606..1766Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 1607..1766 +
1691679565.4866514-CDS-H-elongata_contig47098:1606..17661691679565.4866514-CDS-H-elongata_contig47098:1606..1766Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 1607..1766 +
1622930776.8957305-CDS-H-elongata_contig47098:2056..21481622930776.8957305-CDS-H-elongata_contig47098:2056..2148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 2057..2148 +
1691679565.498536-CDS-H-elongata_contig47098:2056..21481691679565.498536-CDS-H-elongata_contig47098:2056..2148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 2057..2148 +
1622930776.9114368-CDS-H-elongata_contig47098:2193..26581622930776.9114368-CDS-H-elongata_contig47098:2193..2658Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 2194..2658 +
1691679565.5166385-CDS-H-elongata_contig47098:2193..26581691679565.5166385-CDS-H-elongata_contig47098:2193..2658Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 2194..2658 +
1622930776.9291625-CDS-H-elongata_contig47098:2841..29581622930776.9291625-CDS-H-elongata_contig47098:2841..2958Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 2842..2958 +
1691679565.5273807-CDS-H-elongata_contig47098:2841..29581691679565.5273807-CDS-H-elongata_contig47098:2841..2958Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 2842..2958 +
1622930776.9464576-CDS-H-elongata_contig47098:3824..39381622930776.9464576-CDS-H-elongata_contig47098:3824..3938Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 3825..3938 +
1691679565.537454-CDS-H-elongata_contig47098:3824..39381691679565.537454-CDS-H-elongata_contig47098:3824..3938Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47098 3825..3938 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47098.11811.1prot_H-elongata_contig47098.11811.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47098 385..3938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47098.11811.1

>prot_H-elongata_contig47098.11811.1 ID=prot_H-elongata_contig47098.11811.1|Name=mRNA_H-elongata_contig47098.11811.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp
SASVDARDLASGFFLLCSGNKSVKLASAFRLLDEDGDDQLSRDAVWRFLR
SLLSILMGFSTACQAKQQSKVAEEVNSVAAWTSNLIFQSPNLVTRSSLSF
DELAAWYTSEGYKVSPWLELLDLNKWAVGAASHSGPNGGLRRSNGSALRS
AEQRKPMVPPGKPLIAEPKPPSTAATNTPAVAGSNSVTGGGAREGVSGND
GAGGTGSGVAAREADASVSGGRTAGAPGGGSAGRVNGVVDVVGRNGGGGG
NGVGDAAQRAGLGRNGGSTSGTGNGDVGGGGTGAAGQGVAADSSSPTSQV
LFTFPLVPDVELLVMQEDVDFVQRVVVGTRLAALLPQDILETFRGKATPG
PRGKEVTKAAFDEGMQELVRLQSMLEDERDLLSFALANIFFAYDRDQSER
VLLR
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mRNA from alignment at H-elongata_contig47098:385..3938+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47098.11811.1 ID=mRNA_H-elongata_contig47098.11811.1|Name=mRNA_H-elongata_contig47098.11811.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3554bp|location=Sequence derived from alignment at H-elongata_contig47098:385..3938+ (Himanthalia elongata Himel1 dioecious)
AGCGCCTCGGTCGACGCCCGTGATCTTGCGAGCGGGTTCTTCTTGCTTTG
CTCGGGAAACAAGAGCGTCAAGCTGGCGAGTGCCTTCCGGCTTCTGGATG
AGGACGGTGACGACCAGCTCAGCAGAGACGCTGTGTGGCGGTTCTTGAGG
TGAGCGTTGCGGTGGAGCCTTATTTTCTATTGATGTCGATGGCGATGACC
ATAGAGGTGAACCTCGGAGAGGGAGCGTTGGAGGGGGGGGGTGACGGGGG
GTGTCAATTCTCTTTTGTTGAGGATCATTTTTCCTTCCGGTTTATCTTGT
AGCAATTTCGAGGAGGCCAATCATCACTTACTTCCTCGGACTTGATTCTG
AACCTAGGATGGGCAATTGGTGACGGTAACGGTAACCCTCCAACGGTTTC
TCCTCGGTATCCGGGGAATTGATTCTTGTATCCCGGTTCACGGTCTTGGC
GCTTTCGCGTGGCGCACATCAGTATTACGTATTGCGCAATGTTTATATAT
TTTTTGATGATAAGATCATGATAAGATCATGAAAGGTTTGATCTTCGTGG
CATGGAAAGCAGCAGCCGAACCGTCGCACATTGCTATGATATATAGAATA
GAATAGAATATAGAATATAGAACATATAACTCCTTTCTTGTTTCTACGGT
TATTACAATCGGATCGAATAATATAATAACCGACTCCTCCCACAATAGCC
TAATAATACTCAAGGCGACTCCTATAAGAGATACACGACGCTCAACACTG
ACACGCAACAACGACGCCTCAACCATATTGCATACGACACTTGGCGCTAG
AACGACAAATCTCCCAAGCGTCGCTCATAAAAACCAACGCTTCGACGCGG
CACGGCTTCTCGCGGCCGCAGGTCTCTCCTTTCCATCCTCATGGGGTTCA
GCACCGCATGCCAAGCGAAGCAGCAGTCGAAGGTTGCCGAGGAAGTCAAC
TCGGTCGCGGCGTGGACGAGCAACCTTATTTTCCAGGTACCGTAGATGGT
TTTCTCCAGTACTCTTGCAGACTGTTTATTGTGTGGCTGATTGAACTTAT
TTATAGCTAAGTCAAACAAGCAGGTGAGCAGGTGGGTATATAGGTTGGTA
AGCCCAACCAAGCTACGCTCGAACTGCTTCGGTAGTATTAATAGTAGTCG
TCGTATGATGATAATAATGATGATAGTCTTGCCGACCGCGTTCACTCTGG
TACGCGCTCTTTCCTCGCGCAGAGCCCCAACCTCGTGACTCGGAGCTCGC
TGTCATTTGACGAGCTGGCGGCATGGTACACAAGTGAGGGCTACAAAGTG
TCCCCATGGCTGGAGCTGCTCGATCTCAACAAGTGGGCGGTCGGGGCTGC
ATCGCATTCCGGGCCCAACGGTGGGTTACGAAGTTTTTGTTTGTTTCTTT
TTCTAGTCCCCGTGCCCCCCGTCCCCGCGCGCTCGTCTCGAAGCATCGTT
GCGAACGCCCCCGCACATCTACCATCCCCGTTCCTTGAAAGAATGTCGAC
ATCGTTCACTATGTTTTATGCCAAAATGGTTTCGGATACCCTCTACCCCA
CGGGTCCTTTAGCACGCCTCTTCTACATTCTATGTATGTATATATAATGT
TTTGTTCGTATCGTGTACTGGTACATGCGTCGGGTCTCCTTCACCACATT
TTATTTCACCGCACCCGCGCAGGGTCCAACGGAAGCGCATTGCGCTCCGC
TGAGCAGCGCAAGCCTATGGTGCCGCCGGGTAAACCTCTTATCGCCGAGC
CGAAGCCTCCCAGCGTGAAGCATTCCTCGACCAGTGTTGGGAGTCGCTGG
GGCTCGAAGACGGCGGCGACTAACACACCCGCTGTTGCAGGAAGCAACAG
CGTCACGGGGGGGGGCGCACGAGAAGGCGTAAGTGGAAACGATGGAGCCG
GGGGCACTGGCAGTGGAGTGGCTGCTAGGGAAGCAGACGCTAGTGTCTCG
GGGGGTCGGACGGCAGGGGCGCCGGGTGGAGGAAGCGCAGGCAGGGTAAA
CGGTGTTGTCGACGTCGTCGGGAGAAACGGCGGAGGCGGTGGGAATGGGG
TGGGCGATGCGGCGCAGAGAGCCGGCTTGGGAAGGAACGGTGGGAGCACT
AGCGGGACAGGGAACGGCGATGTGGGAGGCGGTGGAACTGGTGCCGCGGG
GCAGGGGGTAGCAGCGGACTCGAGCAGCCCCACGAGCCAGGTCCTGTTCA
CCTTTCCTCTCGTGCCTGACGTGGAGCTATTGGTCATGCAGGAGGACGTG
GATTTCGTGCAGCGGGTCGTGGTGGTGAGCGTGGCTACTTTTAGCGGCGA
GGAATGGATTTGTGTATCAACCGCTGCGTGTCTCTGCCGTTGGTTAGTCG
CTTCATCTGTCGGTTGATGGTAGTGTGCGCTGGGCGTTCGCTATAACTTT
CAGTCGTTTTTCTTTTGGTGGGCTTCGTTTTCTCAAAGCTCTCGATTACA
TACACAGGGGACGCGATTGGCGGCGCTTCTGCCACAAGACATCCTGGAAA
CCTTCCGGGGGAAAGCGACGCCGGGGCCGAGAGGCAAGGAAGTGACGAAG
GCGGCCTTCGATGAGGGAATGCAGGTGCAGGCGCAAGTGATCTTTGTTTG
TTGCCTTTTTGTTCGGCGCCCGCGAGAGGATGCGTCGAGATAATTCGCGG
GAACTTGTCGTGCTCACGGTACCGGCCGGGTAACGTGGTTAGCACCTTAC
CAGAATGTAAAACACACTTACAGGGTTGTATATTTAGGGGTACATGGGAT
ATAGGATGTGCTTAACCCAGGAAAACGATGTACCGTGGGTTCATCTCGTC
CGTCTGATCACATGGGCCCCTCGTCACTCCCTGTAAAGGGTGCGGGGGGG
GAAGGACTTACCCCCCTCCCCCCTCCTTCCCCTCCTCCCATAAAAACACG
CCTCTTCTGTTTTGCGCCCCTCGGGTGATGTGTGTGGTCATCTTATATAG
CAGTACAGTATGGATCAACCGGATATGGTTACCAATCCATCTCGTGGTCA
GCTGAACAGGGAAAATTAATTTTCCGTGTCCCTTTTCGCGCCTGAGTATT
TGGTCCCGCGAGACGGGTTTGGCTGTCCTGTCCCGCGTCAGCCCACTCAT
TCTCCCAAACCAGGCTGAATCTGGTGCGTACTCCCGGGATCATCTCGATC
CTCTGGTTTTCCGCGACGATGTCCATCTCTGCTGCCAACCGCCATCGGGC
CAATCCCGAGTTCATCAGGTCACACAATTACGTACCGATGGCGTTCACCA
CCGAGAGTCCTCGGCATTGAGCCAGCAGTCCTCAAAGTAGGTTGAGTAAC
AAGTGCAGCTTATTGAGGTAGCCCCATGAAGCAATTATTGTAAGCCTCTC
TTTTCCCACACCGACGTTTGCTATACAATGGACATGTGTCGCAACGAATT
GCCATTCCCTACTTTGATTCCTCCGGACGGTGAACGCCAGGAGCTGGTCC
GGCTGCAGAGCATGCTTGAAGACGAGCGCGATCTTCTCTCCTTCGCCCTG
GCCAATATTTTCTTCGCGTACGACCGCGACCAAAGCGAGAGGGTGCTGCT
CAGG
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Coding sequence (CDS) from alignment at H-elongata_contig47098:385..3938+

>mRNA_H-elongata_contig47098.11811.1 ID=mRNA_H-elongata_contig47098.11811.1|Name=mRNA_H-elongata_contig47098.11811.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2424bp|location=Sequence derived from alignment at H-elongata_contig47098:385..3938+ (Himanthalia elongata Himel1 dioecious)
AGCGCCTCGGTCGACGCCCGTGATCTTGCGAGCGGGTTCTTCTTGCTTTG
CTCGGGAAACAAGAGCGTCAAGCTGGCGAGTGCCTTCCGGCTTCTGGATG
AGGACGGTGACGACCAGCTCAGCAGAGACGCTGTGTGGCGGTTCTTGAGA
GCGCCTCGGTCGACGCCCGTGATCTTGCGAGCGGGTTCTTCTTGCTTTGC
TCGGGAAACAAGAGCGTCAAGCTGGCGAGTGCCTTCCGGCTTCTGGATGA
GGACGGTGACGACCAGCTCAGCAGAGACGCTGTGTGGCGGTTCTTGAGGT
CTCTCCTTTCCATCCTCATGGGGTTCAGCACCGCATGCCAAGCGAAGCAG
CAGTCGAAGGTTGCCGAGGAAGTCAACTCGGTCGCGGCGTGGACGAGCAA
CCTTATTTTCCAGGTCTCTCCTTTCCATCCTCATGGGGTTCAGCACCGCA
TGCCAAGCGAAGCAGCAGTCGAAGGTTGCCGAGGAAGTCAACTCGGTCGC
GGCGTGGACGAGCAACCTTATTTTCCAGAGCCCCAACCTCGTGACTCGGA
GCTCGCTGTCATTTGACGAGCTGGCGGCATGGTACACAAGTGAGGGCTAC
AAAGTGTCCCCATGGCTGGAGCTGCTCGATCTCAACAAGTGGGCGGTCGG
GGCTGCATCGCATTCCGGGCCCAACGGTGGGTTACGAAAGCCCCAACCTC
GTGACTCGGAGCTCGCTGTCATTTGACGAGCTGGCGGCATGGTACACAAG
TGAGGGCTACAAAGTGTCCCCATGGCTGGAGCTGCTCGATCTCAACAAGT
GGGCGGTCGGGGCTGCATCGCATTCCGGGCCCAACGGTGGGTTACGAAGG
TCCAACGGAAGCGCATTGCGCTCCGCTGAGCAGCGCAAGCCTATGGTGCC
GCCGGGTAAACCTCTTATCGCCGAGCCGAAGCCTCCCAGCGGTCCAACGG
AAGCGCATTGCGCTCCGCTGAGCAGCGCAAGCCTATGGTGCCGCCGGGTA
AACCTCTTATCGCCGAGCCGAAGCCTCCCAGCACGGCGGCGACTAACACA
CCCGCTGTTGCAGGAAGCAACAGCGTCACGGGGGGGGGCGCACGAGAAGG
CGTAAGTGGAAACGATGGAGCCGGGGGCACTGGCAGTGGAGTGGCTGCTA
GGGAAGCAGACGCTAGTGTCTCGGGGGGTCGGACGGCAGGGGCGCCGGGT
GGAGGAAGCGCAGGCAGGGTAAACGGTGTTGTCGACGTCGTCGGGAGAAA
CGGCGGAGGCGGTGGGAATGGGGTGGGCGATGCGGCGCAGAGAGCCGGCT
TGGGAAGGAACGGTGGGAGCACTAGCGGGACAGGGAACGGCGATGTGGGA
GGCGGTGGAACTGGTGCCGCGGGGCAGGGGGTAGCAGCGGACTCGAGCAG
CCCCACGAGCCAGGTCCTGTTCACCTTTCCTCTCGTGCCTGACGTGGAGC
TATTGGTCATGCAGGAGGACGTGGATTTCGTGCAGCGGGTCGTGGTGACG
GCGGCGACTAACACACCCGCTGTTGCAGGAAGCAACAGCGTCACGGGGGG
GGGCGCACGAGAAGGCGTAAGTGGAAACGATGGAGCCGGGGGCACTGGCA
GTGGAGTGGCTGCTAGGGAAGCAGACGCTAGTGTCTCGGGGGGTCGGACG
GCAGGGGCGCCGGGTGGAGGAAGCGCAGGCAGGGTAAACGGTGTTGTCGA
CGTCGTCGGGAGAAACGGCGGAGGCGGTGGGAATGGGGTGGGCGATGCGG
CGCAGAGAGCCGGCTTGGGAAGGAACGGTGGGAGCACTAGCGGGACAGGG
AACGGCGATGTGGGAGGCGGTGGAACTGGTGCCGCGGGGCAGGGGGTAGC
AGCGGACTCGAGCAGCCCCACGAGCCAGGTCCTGTTCACCTTTCCTCTCG
TGCCTGACGTGGAGCTATTGGTCATGCAGGAGGACGTGGATTTCGTGCAG
CGGGTCGTGGTGGGGACGCGATTGGCGGCGCTTCTGCCACAAGACATCCT
GGAAACCTTCCGGGGGAAAGCGACGCCGGGGCCGAGAGGCAAGGAAGTGA
CGAAGGCGGCCTTCGATGAGGGAATGCAGGGGACGCGATTGGCGGCGCTT
CTGCCACAAGACATCCTGGAAACCTTCCGGGGGAAAGCGACGCCGGGGCC
GAGAGGCAAGGAAGTGACGAAGGCGGCCTTCGATGAGGGAATGCAGGAGC
TGGTCCGGCTGCAGAGCATGCTTGAAGACGAGCGCGATCTTCTCTCCTTC
GCCCTGGCCAATATTTTCTTCGCGTACGACCGCGACCAAAGCGAGAGGGT
GCTGCTCAGGGAGCTGGTCCGGCTGCAGAGCATGCTTGAAGACGAGCGCG
ATCTTCTCTCCTTCGCCCTGGCCAATATTTTCTTCGCGTACGACCGCGAC
CAAAGCGAGAGGGTGCTGCTCAGG
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