mRNA_H-elongata_contig46673.11766.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46673.11766.1
Unique NamemRNA_H-elongata_contig46673.11766.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A6H5JIL0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL0_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 5.200e-128
Identity = 185/254 (72.83%), Postives = 217/254 (85.43%), Query Frame = 1
Query:   10 YGLLFSMQAWLSAIVMFPFCFLAAAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDIPVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADALEDWQKPVEKKPPSQSTSEPPS 771
            YGLLF+ QAW +A++MFP C L+A V+ IFDWRRMRPPT VA LWGR  + NMGVRPK+EGAELLPP  E V+FVANHGSYLDIPVTN LPR+CKYLMKAELLWLPIVGWKA+++RDIFVHR TS TFR+L+++TTR+LKAGNSI  FPEGTRSRDGRLG FKRGPFTMAQ+AGVR+VP+TITGV EAMPPFA+APL KP+ V+LV+H  IST+G+ +KDLIAEAR++V+D LEDWQKP  K   S +    PS
Sbjct:   52 YGLLFATQAWFTALLMFPLCLLSALVAPIFDWRRMRPPTAVAVLWGRLALWNMGVRPKVEGAELLPPRGEAVVFVANHGSYLDIPVTNCLPRMCKYLMKAELLWLPIVGWKAVLARDIFVHRGTSTTFRQLLRSTTRTLKAGNSIMTFPEGTRSRDGRLGKFKRGPFTMAQQAGVRVVPLTITGVTEAMPPFAMAPLCKPRSVRLVVHPAISTEGKPVKDLIAEARKAVSDGLEDWQKPRPKVDASSNGDASPS 305          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A835YT11_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT11_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.990e-67
Identity = 117/243 (48.15%), Postives = 164/243 (67.49%), Query Frame = 1
Query:    1 LGSYGLLFSMQAWLSAIVMFPFCFLAAAVSA-------IFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDIPVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADAL 708
            L +YGLL+++ + L+ +++FP   +   ++        + D +R+R  +    +W R  +L+MG+RPK+EG   LPPP E V+F+ NH S+LD+PVT FLPRL KYL KAEL W+P++GWKA+++ DI V R   ++FRRLI   + SL+AGN + AFPEGTRSR G L  FK+GPF MAQKAGVR+VP++I GV E MPP ALAPL KP  V +VIH P+      ++  +  AR ++A  L
Sbjct:  116 LNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPA-VTIVIHAPVDPAVEGVEGAMRSARAAIASGL 357          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A7S3Y5W9_HETAK (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5W9_HETAK)

HSP 1 Score: 181 bits (458), Expect = 1.010e-49
Identity = 99/241 (41.08%), Postives = 148/241 (61.41%), Query Frame = 1
Query:   13 GLLFSMQAWLSAIVMFPFCFLAAAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVRPK-IEGAELLPPPEEPVLFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADALEDWQKPV 729
            G  F     L+  ++FPF  L+   +  FD RR R        W +  ML++  RPK I GAE LP   E VL++ANH S+LDI  ++ FLPR  KY+ K E+L +P++GW   ++  I V R    +    +K+T +SLK GNS+  FPEGTR++ GR+GDFK+GPFT+A+KAG R+VP+++  V +  P +A+ PL +P +V++VIH PI  K     +L+  A  ++   L D+Q+P+
Sbjct:  102 GFFFLFNTMLTCALLFPFTVLSYLWAMAFDRRRRRAVDNCVHWWAKLSMLSVFYRPKEIVGAEHLPDDAEGVLYLANHTSFLDILTLSGFLPRNFKYVSKVEILKIPLIGWAMQMAAHIAVRRMDRRSQIETVKSTIQSLKDGNSVTMFPEGTRTKTGRMGDFKKGPFTIAKKAGARVVPISLCNVTKWFPSWAVMPLGRPTDVRVVIHPPIDPKDLTEAELMERAFAAIESGLPDFQRPL 342          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A7S2B9X1_9EUKA (1-acyl-sn-glycerol-3-phosphate acyltransferase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B9X1_9EUKA)

HSP 1 Score: 173 bits (439), Expect = 1.070e-48
Identity = 90/209 (43.06%), Postives = 130/209 (62.20%), Query Frame = 1
Query:   19 LFSMQAWLSAIVMFPFCFLAAAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDIPV-TNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPI 642
            LFS+   L  + ++PF   A     +FD +R R    V + W R  M+  G + ++ G E LPP +EPV++  NH S+LDI V + +LPR CKY+ K E+L +P++GW    ++ I + R   A+  + +K    +LK GNS+  FPEGTRS+DGRL DFK+G FTMA +AGVR+VP+TI G     PP A  PL  P+ V+++IH P+
Sbjct:   26 LFSVVTVLVLLAVYPFVLSAVLFGILFDNKRRRFVDRVVQAWARGTMVFFGAKIQVFGLENLPPIDEPVMYTPNHCSFLDIFVLSGYLPRPCKYISKIEILRIPLIGWAMAFAKHIAIRRMDRASQLKTLKDAIETLKDGNSLVTFPEGTRSKDGRLLDFKKGAFTMASRAGVRVVPITIVGTHLYQPPGAFVPLAVPRGVRIIIHPPL 234          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A7S2UXA9_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 7.750e-47
Identity = 92/207 (44.44%), Postives = 134/207 (64.73%), Query Frame = 1
Query:  130 VARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADALEDWQK---PVEKK 738
            V  +W R  ML+M  +PK+EG E LPP +E V+F+ANH S+LDI  ++ FLPR  KY+ K E+L +P++GW    +  I + R + A+  ++ +   +SLK GNS+  FPEG+R+RDGR+   K+GPFT+A++AGVRIVPV++  +    PP A  PL  P++  L IH PI TKG+   +++   R ++   L DWQK   P EKK
Sbjct:  149 VVSIWARLSMLSMFYKPKVEGLENLPPKDETVVFMANHQSFLDIFTLSGFLPRRFKYISKVEILRIPLIGWAMNFAGHIAIQRASVASQIQVFRDAIKSLKDGNSVCIFPEGSRTRDGRMLPLKKGPFTIAKRAGVRIVPVSLGELFRYNPPSAWLPLGIPKDAVLKIHPPIETKGKSEAEVMELVRIAINSGLPDWQKAPSPTEKK 355          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A7S1U818_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U818_9STRA)

HSP 1 Score: 171 bits (434), Expect = 8.800e-47
Identity = 90/204 (44.12%), Postives = 130/204 (63.73%), Query Frame = 1
Query:  130 VARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADALEDWQKPVEKK 738
            V RLW    M  MG + ++ G E LPP  EP++ V NH S+LDI  ++ ++PR  KY+ K E+L LP++GW   +++ I + R + A+  R +K    S+K GNS+  F EGTRS+DGRL  FK+GPFTM ++AGVRIVPV+I G+ +  P +A  PL  P+ V L IH PI TKGR   D++ E   +V   + + Q+P+ +K
Sbjct:  125 VVRLWAWAAMRLMGYKAEVIGLENLPPASEPIMVVPNHTSFLDIFTISAYVPRNLKYISKVEILRLPLIGWAMRMAKHIAIRRSSRASQIRTLKEAVDSMKDGNSLVTFAEGTRSKDGRLMRFKKGPFTMTKRAGVRIVPVSIRGLYKWHPKWAWLPLATPKGVTLKIHPPIETKGRNADDVLEETYNAVLSGMPEDQRPLPRK 328          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A0G4G8W7_9ALVE (PlsC domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G8W7_9ALVE)

HSP 1 Score: 173 bits (439), Expect = 4.050e-46
Identity = 99/244 (40.57%), Postives = 146/244 (59.84%), Query Frame = 1
Query:    1 LGSYGLLFSMQAWLSAIVMFPFCFLAAAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPE-EPVLFVANHGSYLDIPVTN-FLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADALEDWQKP 726
            L   GL++    +L A   +P    A  VS   + ++     MV  +W R  + N  + PK+EG E LP  + EP+L VANH S+LDIPV + FLP   KY+ K E+L +P++GW   ++R + +HR    +  +  + T   LK G S+ AF E TRSRDGR+  FK G   MA+KAGVR++PV++ G+  + PP AL P+  P++ +LVIH PI T+GR + D++ EA  +V + L + QKP
Sbjct:  198 LNGLGLVWMSLVFLWAAFWYPLLICAFLVSEGVNDKKRSLVDMVVAVWSRFCLWNATLNPKVEGLENLPKDKSEPLLIVANHSSFLDIPVLSAFLPIRFKYISKVEVLSIPLLGWAMQMARHVAIHRGDRRSSLKTFRETVNLLKEGASVCAFAEETRSRDGRVRKFKPGTLKMAEKAGVRVLPVSLCGLHSSFPPDALLPVAVPRDARLVIHPPIETRGRSVDDVVNEAWEAVVEGLPEAQKP 441          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: M1V4N2_CYAM1 (1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V4N2_CYAM1)

HSP 1 Score: 170 bits (430), Expect = 9.060e-46
Identity = 95/230 (41.30%), Postives = 136/230 (59.13%), Query Frame = 1
Query:   25 SMQAWLSAIVMFPFCFLAAAVSA-IFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDIPVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKP-QEVKLVIHQPISTKGRLMKDLIAEARRSVADAL 708
            S+  ++  ++++PF  +     A ++DW        +A LW R  ML+ G+ P++ G E L PP+  VL+V NH SYLDI    FL R  K++ K  +  +PI+GW   ++R I + R +     R+ +     L+ G S+  FPEGTRS+DG L  FK+GPF +A++AGV IVP+TITG  E MPP+ALAPL  P Q + L IH  I T    + DLI  AR ++A AL
Sbjct:  145 SLPLFIIMLILYPFVLILDPYRARVYDW--------IAMLWMRLSMLSTGIHPRVVGTENLLPPDATVLYVCNHNSYLDIYTVAFLGRFFKFVSKRSIFAIPIIGWAMGMARQIGIERDSRRDQLRVFREMVSRLEHGVSLLLFPEGTRSKDGTLRAFKQGPFRVAKQAGVPIVPLTITGTAEVMPPWALAPLRWPKQRITLTIHPAIQTADHSVTDLIEAARTAIASAL 366          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A6S9FR58_HETAK (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FR58_HETAK)

HSP 1 Score: 162 bits (410), Expect = 6.180e-43
Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 1
Query:   13 GLLFSMQAWLSAIVMFPFCFLAAAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPISTKGRLMKDLIAEARRSVADALEDWQKPV 729
            G LF +    S +++FP    A A S +FD +R      V  LW +  M  MG R ++EGAE +P    PV+   NH S+LDI  ++ FLP+  KY+ K E+L +P +GW   ++  I V R+ S +    +K T  +LK G SI  FPEGTRS+DGRL +FK+GPF++A KAG  I+PV+I  V +  P  A  PL  P +V + IH PIS KG   +DL+ +   ++A  L   QKP+
Sbjct:  124 GFLFIVATMTSIVLVFPLTCAAWAYSKMFDPKRRLAVDWVVGLWAKLAMGVMGYRVRVEGAEHVPR-RGPVMICPNHTSFLDILTLSAFLPKGFKYVSKREILRIPFIGWTMQLAGHIPVMREDSRSQLETVKNTIVALKDGCSILMFPEGTRSQDGRLQNFKQGPFSIATKAGATILPVSICNVPKWFPATAAMPLRVPNDVVIRIHPPISAKGMSREDLLVKTFGAIASGLPAEQKPI 362          
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Match: A0A7S0Q290_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q290_9EUKA)

HSP 1 Score: 159 bits (402), Expect = 3.200e-42
Identity = 90/237 (37.97%), Postives = 137/237 (57.81%), Query Frame = 1
Query:   43 SAIVMFPFCFLA----AAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVRPKIEGAELLPPPEEPVLFVANHGSYLDI-PVTNFLPRLCKYLMKAELLWLPIVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRDGRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLVIHQPIST-KGRLMKDLIAEARRSVADALEDWQKPVEK 735
            +A+V   FC++        S  FD  R R    V + W R  +  MG R  +EG E LPPPEE VL+  NH S+LDI  ++  LPR  KY+ K E+L +P++GW    ++ I + R   A+     K     L+ G+S+  FPEGTRS+DGR+ DFK+GPFTMA +A VR+VP++I G     PP +  PL +P  V++V+H P+   + +  ++ +  A++++  AL    +P+ K
Sbjct:   80 AAVVTVIFCYVPLLPLTLYSLKFDNVRRRGCDWVVQYWARVTLALMGSRVTVEGVENLPPPEEAVLYAPNHCSFLDIFALSGCLPRRFKYVSKIEILRIPLIGWAMQFAKHIAIRRTDRASQLATFKDAVACLQGGSSLVTFPEGTRSKDGRIADFKKGPFTMAARAQVRVVPISIIGTHVFQPPGSAVPLARPTGVRIVVHPPLPPPQNKKEQETLDLAKKTIMSALPPSMQPLPK 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46673.11766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIL0_9PHAE5.200e-12872.83PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YT11_9STRA3.990e-6748.15PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3Y5W9_HETAK1.010e-4941.081-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7S2B9X1_9EUKA1.070e-4843.061-acyl-sn-glycerol-3-phosphate acyltransferase (Fr... [more]
A0A7S2UXA9_9STRA7.750e-4744.441-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7S1U818_9STRA8.800e-4744.12Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G8W7_9ALVE4.050e-4640.57PlsC domain-containing protein n=1 Tax=Chromera ve... [more]
M1V4N2_CYAM19.060e-4641.301-acylglycerol-3-phosphate O-acyltransferase n=1 T... [more]
A0A6S9FR58_HETAK6.180e-4341.251-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7S0Q290_9EUKA3.200e-4237.97Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46673contigH-elongata_contig46673:1112..4219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.0
Seed ortholog evalue5.4e-101
Seed eggNOG ortholog2880.D8LTF6
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0204@1,KOG2848@2759
EC2.3.1.51
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Hectar predicted targeting categorysignal peptide
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-02_006160.1
Exons4
Model size1121
Cds size750
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46673.11766.1prot_H-elongata_contig46673.11766.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46673 1139..3875 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930772.2572927-UTR-H-elongata_contig46673:1111..11381622930772.2572927-UTR-H-elongata_contig46673:1111..1138Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46673 1112..1138 +
1691679563.2752073-UTR-H-elongata_contig46673:1111..11381691679563.2752073-UTR-H-elongata_contig46673:1111..1138Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46673 1112..1138 +
1622930772.3777611-UTR-H-elongata_contig46673:3875..42191622930772.3777611-UTR-H-elongata_contig46673:3875..4219Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46673 3876..4219 +
1691679563.3174694-UTR-H-elongata_contig46673:3875..42191691679563.3174694-UTR-H-elongata_contig46673:3875..4219Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46673 3876..4219 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930772.2983134-CDS-H-elongata_contig46673:1138..14051622930772.2983134-CDS-H-elongata_contig46673:1138..1405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 1139..1405 +
1691679563.2849703-CDS-H-elongata_contig46673:1138..14051691679563.2849703-CDS-H-elongata_contig46673:1138..1405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 1139..1405 +
1622930772.319889-CDS-H-elongata_contig46673:2310..24731622930772.319889-CDS-H-elongata_contig46673:2310..2473Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 2311..2473 +
1691679563.29263-CDS-H-elongata_contig46673:2310..24731691679563.29263-CDS-H-elongata_contig46673:2310..2473Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 2311..2473 +
1622930772.35043-CDS-H-elongata_contig46673:2829..29781622930772.35043-CDS-H-elongata_contig46673:2829..2978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 2830..2978 +
1691679563.3003094-CDS-H-elongata_contig46673:2829..29781691679563.3003094-CDS-H-elongata_contig46673:2829..2978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 2830..2978 +
1622930772.362735-CDS-H-elongata_contig46673:3704..38751622930772.362735-CDS-H-elongata_contig46673:3704..3875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 3705..3875 +
1691679563.3080144-CDS-H-elongata_contig46673:3704..38751691679563.3080144-CDS-H-elongata_contig46673:3704..3875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46673 3705..3875 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46673.11766.1

>prot_H-elongata_contig46673.11766.1 ID=prot_H-elongata_contig46673.11766.1|Name=mRNA_H-elongata_contig46673.11766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
MQAWLSAIVMFPFCFLAAAVSAIFDWRRMRPPTMVARLWGRRVMLNMGVR
PKIEGAELLPPPEEPVLFVANHGSYLDIPVTNFLPRLCKYLMKAELLWLP
IVGWKAIVSRDIFVHRQTSATFRRLIKTTTRSLKAGNSIFAFPEGTRSRD
GRLGDFKRGPFTMAQKAGVRIVPVTITGVVEAMPPFALAPLVKPQEVKLV
IHQPISTKGRLMKDLIAEARRSVADALEDWQKPVEKKPPSQSTSEPPSK*
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mRNA from alignment at H-elongata_contig46673:1112..4219+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46673.11766.1 ID=mRNA_H-elongata_contig46673.11766.1|Name=mRNA_H-elongata_contig46673.11766.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3108bp|location=Sequence derived from alignment at H-elongata_contig46673:1112..4219+ (Himanthalia elongata Himel1 dioecious)
CTTGGCAGCTACGGCCTCCTGTTCTCGATGCAGGCGTGGCTGTCTGCTAT CGTAATGTTCCCTTTTTGCTTCCTCGCGGCTGCAGTCTCCGCCATTTTTG ACTGGCGAAGAATGCGTCCACCGACGATGGTCGCGCGCTTGTGGGGAAGA CGAGTGATGCTCAACATGGGGGTGAGGCCCAAGATCGAGGGGGCGGAGCT GCTGCCGCCGCCCGAGGAACCAGTCTTGTTCGTGGCGAACCACGGGTCGT ATCTCGATATCCCTGTCACGAACTTCTTACCGCGATTGTGTAAGGTGGGT CGGGTAGGGCAGGGCTCTTGGGGTAAGGAAAGGTAAGGAGGAGCAAGCCA GTCGTGGGCTCTTGAGGTAGTATGGCCTGGTTACGTAGCGTCGTGGAGAT TGCAGCGTTGGGATATTTCCAGGTCGTGCGAGGTGATCGGCGAGGGGTTC TTGCAAGCGTTGGCCGACGTACAATCTTTTCGTTGGATGTGGTCTGAGCC CGATGTTCCAGCCTAAATCTGCTCTCGGCCCACCCCTGGTCGATCCCATC CGCGAACACTTGCATGTGCTGGAGTGGAGGTTTGAATATTCGGATTCGCG GTTAAGTTCGTTGGAATGTGGTCATCCTATTTTATTCTGGACTTCCGCCT TGTGGACGCACTACTGTAGCCGGGGTAAGTTAGGGTAGGGCCACACAGGG GAGGAAGGTCACACATGATTTCTACACCTACATTCCTTCTGCGGTGCTTG CCTTATGTGTTTTAAAGGCGATAATAGAAGGATTCAGCTTTCCCTTTCCC TCGTTGACCGTCAAGTATCTTGAATTTTGTATACCCACGAAATAATCGTT CTCCACTTTTTGGGCATGGTGTGAGGTAAAATTCCAGTTCGTGTGACTGC GCCGAGATTCGAACTCACCTCCCAACGTCAGAAGGGTTCGAGGATACACT ATTGATATTTTTTTGCATACATTGAGATGGTGCTGCTACTAGTAGGGTTA TGGCTATATCCCACTATCCTCGACAAGGAACGCGTTCCTCGAAGGCTGCG CATAGCCCAAGCTGGGGCGAAAATTGGTCGAACACATTTGCTCGCATTCG CGCAGGCAGCCGCAAGTTGACACGGGGTGAACCGCGTGCCGTGCAGCTTC ACTAACTTGCTTCATCCACTTGATCGAATTAATCGCGTGGGTACGACAGT ACCTGATGAAGGCGGAACTGCTGTGGCTGCCGATCGTGGGATGGAAGGCG ATCGTCTCGAGGGACATATTCGTACACAGGCAGACTTCCGCCACTTTCCG CCGCTTGATCAAGACGACGACCAGGTCCCTCAAGGCGGGGAACTCGATTT TCGCCTTCCCAGGTATTGCTTTACGAATCAATTCACCGAGCACTGCTCGG GGGGTTCACGCCAACCCCTTCCCCCTGAACCGACCCGCCACAGCCTCAAA ATAATTCCAGTTTCTAAAGTCTTCGGACGCCGTTAATTGATAGTACATTG CAGTGTGGACTAAACTTGCGGCGGTCGGGCTTGAGCGAAGCCGGAGGTTA ATATATATAAATATTACAACAATTGAACGTCGCACTTGCCTTACCTACGT GCACGACGCCTGTCAAGCCTTGTAGTATATAGATTCACCGCGTTGCCTGC GTTGCGTATAGACACGCTGACGCCAATCATTTGCGCTGATCCCCTCTCGT GTTTTATATTTTTCGAAGAGGGAACCCGGAGTCGAGACGGCCGACTGGGG GATTTCAAGCGAGGACCTTTTACTATGGCACAGAAGGCGGGGGTACGCAT CGTGCCCGTGACCATCACCGGAGTAGTCGAGGCGATGCCGCCGTTTGCGT TGGCGCCGCTCGTAAAGGTAAGGCCGAAAGCCCTTCAATCATCATACTCT TCTGAATCACCGCACTCGGTCGGCGTTGCTGGGAGCTTGTATGCTGGAGG CGTTTTCTCGACAGTAGCGAGGGGTTTTGCTCGGTTTAAGGCGGCGGGAT GGTGGAAATGGTGTAGGAAGAGGGTGTTTTTGTGATGCCTGGCGAGTCGT ACCCGTAGCCGAACTCGATCAGGCCTTGTCATTCCCGAGTATGCGATAAA CTCAAGCGATCATGCTCTATTTCGCTTTCATGCGCAATTCCGCCATCGGC AAAGGTGGCTTCCCTCGTACCGCAATACAGATCGCTTGTGCTGTTGAAAA CATTGTCACGCGGTAAGCACGATCCGTTCTCGTGTAGCCGATCATTTTTT ATCGGCTGGAGACAATGCAAGCCTTGTAATTCTCATGCAAAGTCCTTGCG GTTGGCTTCGGGCGTCTCGTCGTCCGTGCAATCTGTCGCCCTGGGGCATG CTACATTTTTGTTTTGCGGTGATCTCTGGGGGGCATGTGGGTTGATTCGT CGATATGCGAAGCAAGGAAGAAGCGTACCTGGCCATTGCCACACACGAAA TACGCTTCCCTAAACATTGCCACACCGTATCCCTCGCTTCCTTTTCCTGC CTATGCTTGTCCCCCGCGCCCGAACAACAACCCGCGCGATCGTGGGGGTT TGTGTCGCGGACGATGGGGTGCGTCCCACTGCTGTGAGCGCAGCCACAAG AGGTAAAGCTCGTGATCCACCAACCAATTTCCACCAAAGGACGATTAATG AAGGATTTAATTGCGGAGGCGAGGCGATCAGTGGCCGACGCGTTAGAAGA CTGGCAGAAACCTGTCGAGAAAAAACCGCCTTCGCAATCGACGAGCGAGC CTCCATCAAAGTAGAGCGAGCTTTTGCCGCATGTGTTAGAAATATAGATC GAACTACCGGTCGACGGTGGATCTGGCGCGTCCTTCGCAGGACACGTGGG TTGGTATCGGTATCGGTATCTAAGCGGGTAGAGGGATTGACGATATGCGC GACATGGTGATTACGGGAGCGAGGATTTTTCGCTGTGAGACGGAAGGGAT AGTAAATATCGATGAACCAGTTTTGCTAATATTTTGGGAAAGGGGATGTG GATTTGAAGCAGTGCGCCGGGCCCTTGCAGGGCGTGTGCGGTGTGCGACG GACGGAAGGTGGTGCCAGGCCGCGGCTTACTTCGCCATGTTAAATATTTA ACTTGTGG
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Coding sequence (CDS) from alignment at H-elongata_contig46673:1112..4219+

>mRNA_H-elongata_contig46673.11766.1 ID=mRNA_H-elongata_contig46673.11766.1|Name=mRNA_H-elongata_contig46673.11766.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig46673:1112..4219+ (Himanthalia elongata Himel1 dioecious)
ATGCAGGCGTGGCTGTCTGCTATCGTAATGTTCCCTTTTTGCTTCCTCGC
GGCTGCAGTCTCCGCCATTTTTGACTGGCGAAGAATGCGTCCACCGACGA
TGGTCGCGCGCTTGTGGGGAAGACGAGTGATGCTCAACATGGGGGTGAGG
CCCAAGATCGAGGGGGCGGAGCTGCTGCCGCCGCCCGAGGAACCAGTCTT
GTTCGTGGCGAACCACGGGTCGTATCTCGATATCCCTGTCACGAACTTCT
TACCGCGATTGTGTAAGATGCAGGCGTGGCTGTCTGCTATCGTAATGTTC
CCTTTTTGCTTCCTCGCGGCTGCAGTCTCCGCCATTTTTGACTGGCGAAG
AATGCGTCCACCGACGATGGTCGCGCGCTTGTGGGGAAGACGAGTGATGC
TCAACATGGGGGTGAGGCCCAAGATCGAGGGGGCGGAGCTGCTGCCGCCG
CCCGAGGAACCAGTCTTGTTCGTGGCGAACCACGGGTCGTATCTCGATAT
CCCTGTCACGAACTTCTTACCGCGATTGTGTAAGTACCTGATGAAGGCGG
AACTGCTGTGGCTGCCGATCGTGGGATGGAAGGCGATCGTCTCGAGGGAC
ATATTCGTACACAGGCAGACTTCCGCCACTTTCCGCCGCTTGATCAAGAC
GACGACCAGGTCCCTCAAGGCGGGGAACTCGATTTTCGCCTTCCCAGTAC
CTGATGAAGGCGGAACTGCTGTGGCTGCCGATCGTGGGATGGAAGGCGAT
CGTCTCGAGGGACATATTCGTACACAGGCAGACTTCCGCCACTTTCCGCC
GCTTGATCAAGACGACGACCAGGTCCCTCAAGGCGGGGAACTCGATTTTC
GCCTTCCCAGAGGGAACCCGGAGTCGAGACGGCCGACTGGGGGATTTCAA
GCGAGGACCTTTTACTATGGCACAGAAGGCGGGGGTACGCATCGTGCCCG
TGACCATCACCGGAGTAGTCGAGGCGATGCCGCCGTTTGCGTTGGCGCCG
CTCGTAAAGAGGGAACCCGGAGTCGAGACGGCCGACTGGGGGATTTCAAG
CGAGGACCTTTTACTATGGCACAGAAGGCGGGGGTACGCATCGTGCCCGT
GACCATCACCGGAGTAGTCGAGGCGATGCCGCCGTTTGCGTTGGCGCCGC
TCGTAAAGCCACAAGAGGTAAAGCTCGTGATCCACCAACCAATTTCCACC
AAAGGACGATTAATGAAGGATTTAATTGCGGAGGCGAGGCGATCAGTGGC
CGACGCGTTAGAAGACTGGCAGAAACCTGTCGAGAAAAAACCGCCTTCGC
AATCGACGAGCGAGCCTCCATCAAAGTAGCCACAAGAGGTAAAGCTCGTG
ATCCACCAACCAATTTCCACCAAAGGACGATTAATGAAGGATTTAATTGC
GGAGGCGAGGCGATCAGTGGCCGACGCGTTAGAAGACTGGCAGAAACCTG
TCGAGAAAAAACCGCCTTCGCAATCGACGAGCGAGCCTCCATCAAAGTAG
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