mRNA_H-elongata_contig46610.11760.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: D7G0P1_ECTSI (Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P1_ECTSI) HSP 1 Score: 273 bits (698), Expect = 4.870e-89 Identity = 132/167 (79.04%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 7 GVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
G K LLIGINYIGQQGEL GCHNDV+MMK+YI GY MD C V+MDD VH PDH+G+I+ F WL + A AGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDY+ SGQITDD ILK LVM+LPEGVTLTVVMDCCHSGSILDLPY +KAD GTISAVEAG
Sbjct: 155 GSTKCLLIGINYIGQQGELAGCHNDVDMMKKYITTHGYSMDPADCKVLMDDNVHGMPDHKGVIEGFRWLTADAKAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYKSSGQITDDEILKELVMVLPEGVTLTVVMDCCHSGSILDLPYALKADEGTISAVEAG 321
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A6H5JY89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY89_9PHAE) HSP 1 Score: 229 bits (585), Expect = 3.300e-74 Identity = 117/164 (71.34%), Postives = 126/164 (76.83%), Query Frame = 1
Query: 16 KSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
K LLIGINYIGQQGEL GCHNDV MMKEYI GY MD C V+MDD VH PD +G+I+ F + GHGGSVKDTSGDEADNMDETLVPVDY+ SGQITDD ILK LVM+LPEGVTLTVVMDCCHSGSILDLPY +KA+ GTISAVEAG
Sbjct: 29 KCLLIGINYIGQQGELAGCHNDVGMMKEYITTHGYSMDPAKCKVLMDDNVHGMPDRKGVIEGF--------------RYDGGHGGSVKDTSGDEADNMDETLVPVDYKSSGQITDDEILKELVMVLPEGVTLTVVMDCCHSGSILDLPYALKANEGTISAVEAG 178
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: D8LJ59_ECTSI (Metacaspase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ59_ECTSI) HSP 1 Score: 230 bits (586), Expect = 3.210e-72 Identity = 111/169 (65.68%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 DSGVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
+SG K+LLIGINY G +GEL+GCHNDV+ M+EYI GY D + ++ DDG H P E I+KA WLV GA AGDSLFMHYSGHGGSVKD +GDE DN DET++PVDY +SGQI DD ILK LVM LPEGV L+VVMDCCHSGSILDLPY+ A G + VEAG
Sbjct: 162 ESGNHKALLIGINYTGGKGELKGCHNDVKQMREYITTHGYPADGANLKIVSDDGEHEEPSKENILKAIKWLVHGAKAGDSLFMHYSGHGGSVKDNTGDEEDNKDETMIPVDYMKSGQIKDDEILKELVMPLPEGVVLSVVMDCCHSGSILDLPYSFDAKDGALELVEAG 330
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A836C803_9STRA (Metacapase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C803_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.740e-67 Identity = 107/169 (63.31%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 1 DSGVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
DS K+LLIGINY+GQQGEL+GCHNDVE MKEYI QGY D+ +V+MDDG H +P + KAF WLV GA GDSLFMHYSGHGGS+ D +EAD DET+VP+DYQ GQI DD + K LV LP GV +T+VMDCCHSGSI DLPY I G ++AVEAG
Sbjct: 159 DSKNHKALLIGINYVGQQGELKGCHNDVEAMKEYIIEQGYTDSPDTMMVLMDDGKHKDPTAANLAKAFAWLVDGAQEGDSLFMHYSGHGGSMPDDESEEADAKDETMVPLDYQTVGQIRDDDLYKMLVAPLPVGVEMTIVMDCCHSGSIFDLPYNIAMTGDLVAAVEAG 327
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A7S0YNU0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YNU0_9CRYP) HSP 1 Score: 215 bits (548), Expect = 4.770e-66 Identity = 103/168 (61.31%), Postives = 125/168 (74.40%), Query Frame = 1
Query: 4 SGVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
+G K+L IGINY+GQQGELRGCHNDVEMMK YI + G D + V+MDDG H +P H I++ F WLV+GA +GDSLFMHYSGHGGS+ D +GDE+D DET+ PVDY +GQI DDVI + LV +LP+G LTVVMDCCHSGSILDLPY +A + A +G
Sbjct: 178 NGRTKALYIGINYVGQQGELRGCHNDVEMMKTYIEGK-QGFDPSNAKVLMDDGRHESPSHLNILQGFQWLVNGAQSGDSLFMHYSGHGGSMPDDNGDESDGRDETMCPVDYASAGQIRDDVIYEQLVAMLPDGCQLTVVMDCCHSGSILDLPYNFEASDNNLQAASSG 344
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A835YV30_9STRA (Caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV30_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.820e-63 Identity = 99/167 (59.28%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 7 GVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
G +SLLIGINY GQ+ ELRGCHNDV MK YI +QG+ +D+ V++DDG H++P I+ F WLV GA AGDSLF HYSGHGGSV D +GDEAD MDET++P+DY +GQI DD I K LV LP GV T+VMDCCHSG+I+DLPY++ D + A++AG
Sbjct: 35 GRHRSLLIGINYRGQRNELRGCHNDVFAMKRYITSQGFTETADTMCVLVDDGRHSSPTCATIVAGFRWLVDGARAGDSLFFHYSGHGGSVPDDNGDEADGMDETILPLDYLTAGQIRDDDIYKLLVKPLPHGVEFTIVMDCCHSGTIIDLPYSLSVDDELVHAMDAG 201
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A7S1H0Z8_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H0Z8_HEMAN) HSP 1 Score: 204 bits (520), Expect = 3.540e-62 Identity = 97/168 (57.74%), Postives = 122/168 (72.62%), Query Frame = 1
Query: 4 SGVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKADGGTISAVEAG 507
+G K+L IGINY+GQQGELRGCHNDVEMM++YI + G D + V+MD+G P I++ F WL A +GDSLFMHYSGHGGS++D +GDE+D MDET+ PVDY +GQI DD+I + LV + PEG LTVVMDCCHSGSILDLPY +A ++A +G
Sbjct: 149 NGRSKALYIGINYVGQQGELRGCHNDVEMMRQYIEEK-QGFDPSNAKVLMDNGSDEEPTAANILQGFQWLTEDAESGDSLFMHYSGHGGSMRDDNGDESDGMDETMCPVDYARAGQIRDDIIYEQLVSMCPEGCQLTVVMDCCHSGSILDLPYNFEASDSNLAAAASG 315
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A7S0EWY7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EWY7_9CRYP) HSP 1 Score: 202 bits (515), Expect = 4.400e-61 Identity = 98/154 (63.64%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 16 KSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKAD 477
K+LLIGINY+GQQGELRGCHNDV MK+YIA GY D S V+MDDG + P+ I+ + WLV A +GD LFMHYSGHGGS+KD +GDEAD MDET+VPVDY +GQI DD+I + LV LP+GV L V+MDCCHSG+ILDLP++ KA+
Sbjct: 195 KALLIGINYVGQQGELRGCHNDVLQMKDYIAKNGY--DPASMRVLMDDGSNMVPNRANILDSIKWLVKDAKSGDCLFMHYSGHGGSMKDDNGDEADGMDETMVPVDYASAGQIRDDLIFQELVAPLPQGVKLIVIMDCCHSGTILDLPFSFKAN 346
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: L1I610_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I610_GUITC) HSP 1 Score: 202 bits (515), Expect = 5.130e-61 Identity = 97/154 (62.99%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 16 KSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKAD 477
K+LLIGINY+GQ+GELRGCHNDV MK+YI GY D S V+MDDG + NP I+ + WLV A +GD LFMHYSGHGGS+KD +GDEAD MDET+VPVDY +GQI DD+I + LV LP+GV LTV+MDCCHSG+ILDLP++ A+
Sbjct: 195 KALLIGINYVGQKGELRGCHNDVLQMKDYILKNGY--DPASMRVLMDDGSNMNPTRANILDSIKWLVKDAKSGDCLFMHYSGHGGSMKDDNGDEADGMDETMVPVDYTSTGQIRDDIIFQELVAPLPQGVKLTVIMDCCHSGTILDLPFSFTAN 346
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Match: A0A7S2S7V1_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S7V1_9STRA) HSP 1 Score: 202 bits (514), Expect = 7.620e-61 Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 1
Query: 4 SGVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMMDDGVHANPDHEGIIKAFDWLVSGASAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYQESGQITDDVILKNLVMILPEGVTLTVVMDCCHSGSILDLPYTIKA 474
SG ++++LIGINY+GQ+GELRGCHNDV MK Y+ QG+ +D D V+MDDG H NP + I+ A DWLV GA+A DSLF+HYSGHGG V D SGDE D DETLVPVD+Q SGQI DD++ + LVM +PE LT V+DCCHSG++LDLPY I+A
Sbjct: 160 SGKRRAVLIGINYVGQRGELRGCHNDVISMKTYLETQGF-VDGDM-KVLMDDGSHENPTAKNIMSAIDWLVEGAAANDSLFLHYSGHGGYVTDESGDEKDGKDETLVPVDFQSSGQIIDDILFQELVMPVPENCQLTCVLDCCHSGTVLDLPYMIQA 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46610.11760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46610.11760.1 >prot_H-elongata_contig46610.11760.1 ID=prot_H-elongata_contig46610.11760.1|Name=mRNA_H-elongata_contig46610.11760.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp DSGVKKSLLIGINYIGQQGELRGCHNDVEMMKEYIANQGYGMDSDSCLVMback to top mRNA from alignment at H-elongata_contig46610:1165..3596- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46610.11760.1 ID=mRNA_H-elongata_contig46610.11760.1|Name=mRNA_H-elongata_contig46610.11760.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2432bp|location=Sequence derived from alignment at H-elongata_contig46610:1165..3596- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46610:1165..3596- >mRNA_H-elongata_contig46610.11760.1 ID=mRNA_H-elongata_contig46610.11760.1|Name=mRNA_H-elongata_contig46610.11760.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig46610:1165..3596- (Himanthalia elongata Himel1 dioecious)back to top |