mRNA_H-elongata_contig46555.11751.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 299 bits (765), Expect = 4.540e-90 Identity = 145/167 (86.83%), Postives = 159/167 (95.21%), Query Frame = 1
Query: 142 QEAERNAMRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
+EAE+ AM+ ELMDIE +KSGDYTIYVHIIE RDLKAED+QGTSDPVVYVEAFGQ+ AT+VK+ACLSCVFDETFVIGLRNLDKDEFEEG+IRISVMDADGPVAIKNDLIG+YSFDA+NVYFHKDHEIHRQWVALVDDENP+DSGTQGY+QLSI+IVGPGDKLKV
Sbjct: 351 REAEKKAMQQELMDIE----VKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRISVMDADGPVAIKNDLIGSYSFDASNVYFHKDHEIHRQWVALVDDENPKDSGTQGYLQLSIAIVGPGDKLKV 513
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 221 bits (564), Expect = 4.770e-63 Identity = 115/166 (69.28%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 142 QEAERNAMRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLK 639
+EAE+ A+++ELMDIE +KSGDYTIYVHIIE RDLKAED+QGTSDPVVYVEAFGQ+ AT+VK ACLSCVFDETFVIGLRNLDKDEFEEG+IR KDHEIHRQWVALVDDENP+DSGTQGY+QLSI+IVGPGDKLK
Sbjct: 408 REAEKKAIQEELMDIE----VKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKAACLSCVFDETFVIGLRNLDKDEFEEGVIRQV----------------------------KDHEIHRQWVALVDDENPKDSGTQGYLQLSIAIVGPGDKLK 541
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A6H5L7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z1_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.550e-62 Identity = 112/182 (61.54%), Postives = 138/182 (75.82%), Query Frame = 1
Query: 106 VSKEMXXXXXXXQEAERNAMRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPV----AIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLK 639
+KE Q+ E+ A+ +L D + + SGDY YVHIIEVR+LK ED+QGTSDPVVYVEAFGQ+ AT+V + L+ VFDETFVI LRN+D+D+F+EG+ RISVMDAD + A+K DLIGA SFDA VYF+KDHE+HR+WVALVDDENP D G QGY+ LSI+IVGPGD+LK
Sbjct: 706 AAKEADPEEKKRQDEEKKALLAKLSDFK----VVSGDYVAYVHIIEVRELKGEDLQGTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNMDQDDFKEGVFRISVMDADLTIGSLGALKADLIGAVSFDATYVYFNKDHEVHRRWVALVDDENPEDVGIQGYLHLSIAIVGPGDRLK 883
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A812YP87_SYMMI (Myof protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YP87_SYMMI) HSP 1 Score: 196 bits (498), Expect = 1.330e-58 Identity = 91/161 (56.52%), Postives = 128/161 (79.50%), Query Frame = 1
Query: 160 AMRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
A++ EL DIE IKSGDY + V+I+E R+LK +D+ G SDPVV + AFG++ ++ V++A L+CVFDE F+ RN+DKD F EG+IR+ VM+A+ V IKNDLIGAY+FDA+ VY+ KDHE++R+WVAL++D++P D+ QGY++LS+ I+GPGDKLKV
Sbjct: 86 ALKQELGDIE----IKSGDYQVQVNILEARELKGKDMNGLSDPVVTIHAFGEKQSSSVQRASLNCVFDELFIFNFRNMDKDVFSEGVIRVEVMNAN--VVIKNDLIGAYTFDASQVYYQKDHEMYRKWVALMNDDDPEDTAVQGYLKLSVQIIGPGDKLKV 240
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 193 bits (491), Expect = 3.050e-53 Identity = 103/183 (56.28%), Postives = 130/183 (71.04%), Query Frame = 1
Query: 106 VSKEMXXXXXXXQEAERNAMRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPV----AIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
+KE Q+ E++A+ +L D + + SGDY YVHIIEVR+LK ED+QGTSDPVVYVEAFGQ+ AT+V + L+ VFDETFVI LRNLD+D+F+EG+ RISVMDAD + ++K DLIG +HE+HR+WVALVDDENP D G QGY+ LSI+IVGPGD+LKV
Sbjct: 636 AAKEADPEEKKKQDEEKDALLAKLSDFK----VISGDYVAYVHIIEVRELKGEDLQGTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNLDQDDFKEGVFRISVMDADVTIGSLGSLKADLIG-------------NHEVHRRWVALVDDENPEDVGIQGYLHLSIAIVGPGDRLKV 801
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A7S1XRY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRY6_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.320e-50 Identity = 84/147 (57.14%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 202 IKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
IKSGDY VHIIE RDLK ED++GTSDPVVYVE G+++AT V + VFDE F+I LRN+DK++FEE +I + V+DAD + D+IG+ FDA VY+ DHE+++ WV L+DD NP D G QGYM+LS++I GPGDK+KV
Sbjct: 5 IKSGDYQFQVHIIECRDLKGEDLEGTSDPVVYVEVLGKKVATSVISKQNNPVFDERFIINLRNVDKEDFEEAVISVKVLDAD-ILPGGEDMIGSTQFDATYVYYQPDHEMYKNWVPLIDDTNPNDIGVQGYMKLSVAIAGPGDKIKV 150
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A7S2D049_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D049_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.790e-48 Identity = 90/165 (54.55%), Postives = 119/165 (72.12%), Query Frame = 1
Query: 148 AERNAMRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
A R A++ EL +IE IKSGDY + VHIIE R+LK +D++GTSDPVV +EAFG++ +T V C + V+DE F+ RN+DK EFEE +I+ISVMDAD ++D+IG Y D+ VYF K+HEIHR WV L++DE+ D QGY++LSI I+GPGDKL V
Sbjct: 218 ASRAALKKELNEIE----IKSGDYQVQVHIIECRELKGKDLEGTSDPVVTIEAFGEKQSTAVMDKCANPVYDELFIFNKRNIDKLEFEEELIKISVMDAD--TFTRDDVIGTYVVDSTYVYFRKNHEIHRTWVGLINDEDVEDIAIQGYLKLSIQIIGPGDKLVV 376
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A7S3HPR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPR4_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.840e-46 Identity = 83/158 (52.53%), Postives = 115/158 (72.78%), Query Frame = 1
Query: 172 ELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVY-FHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
EL DIE IK GDY + VHIIE R+LKAE++ GTSDPVVYVE FGQ+ T ++ SCV+DE F+ ++NLDK+ F +G++RIS DA+ N +IGAY+ DA+ VY +K HE++R WV L+DDE+P D G QGY+++SI I+GPG+K+++
Sbjct: 402 ELSDIE----IKDGDYQVQVHIIEARELKAENLDGTSDPVVYVECFGQKQNTICVKSVTSCVYDELFIFNMKNLDKETFADGLLRISCYDANSIPFAGNTMIGAYAIDASMVYSMNKYHEMYRAWVPLMDDEDPDDVGVQGYLKISIQIIGPGEKIRI 555
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A7S3JSY6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 169 bits (429), Expect = 6.350e-45 Identity = 82/163 (50.31%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 163 MRDELMDIEASALIKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGP---VAIKNDLIGAYSFDAANVYFHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGDKLKV 642
++ EL +IE +KSGDY + V IIE R+LK ++ GTSDPV +E FG++ + V CLSCVFDETF+I RNLDKD F+E I+ISV DA P V +++ LIG+Y DA+ VY+ K+HE++R WVAL++D +P D QGY++LS+ ++GPGD++ V
Sbjct: 382 LKAELHEIE----VKSGDYQVIVDIIEARELKPKNWSGTSDPVCVIECFGEKRTSSVHNDCLSCVFDETFIINKRNLDKDIFKESSIKISVNDARPPGIGVIVRDTLIGSYVVDASYVYYQKNHELYRVWVALINDRDPEDQAIQGYLKLSVQVIGPGDRVVV 540
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Match: A0A482SZQ4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZQ4_9ARCH) HSP 1 Score: 158 bits (399), Expect = 7.830e-42 Identity = 75/144 (52.08%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 202 IKSGDYTIYVHIIEVRDLKAEDVQGTSDPVVYVEAFGQRLATDVKQACLSCVFDETFVIGLRNLDKDEFEEGIIRISVMDADGPVAIKNDLIGAYSFDAANVY-FHKDHEIHRQWVALVDDENPRDSGTQGYMQLSISIVGPGD 630
+K GDY + VHIIEVR+LKAE++ GTSDPVV++E F Q+ T + S V+DE F+ ++N+DKD E+ +IRIS D+ P+ +K +IGAY+FDA VY +K+HE++R WV L+DDE+P+D G QGYM+LS+ I+GPG+
Sbjct: 420 VKPGDYQVIVHIIEVRELKAENLDGTSDPVVFIECFKQKRNTITVKGVTSAVYDEVFIFNVKNIDKDVLEKEVIRISCRDS-SPL-VKGAMIGAYAFDAMTVYTMNKEHEMYRSWVPLMDDEDPQDVGVQGYMKLSVQIIGPGN 561 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46555.11751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46555.11751.1 >prot_H-elongata_contig46555.11751.1 ID=prot_H-elongata_contig46555.11751.1|Name=mRNA_H-elongata_contig46555.11751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp IYDFSSDTNEEDDEETKRKRNKGGGRGGKGLFKKAVSKEMEKKKREEQEAback to top mRNA from alignment at H-elongata_contig46555:34..2813- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46555.11751.1 ID=mRNA_H-elongata_contig46555.11751.1|Name=mRNA_H-elongata_contig46555.11751.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2780bp|location=Sequence derived from alignment at H-elongata_contig46555:34..2813- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46555:34..2813- >mRNA_H-elongata_contig46555.11751.1 ID=mRNA_H-elongata_contig46555.11751.1|Name=mRNA_H-elongata_contig46555.11751.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig46555:34..2813- (Himanthalia elongata Himel1 dioecious)back to top |