mRNA_H-elongata_contig46392.11732.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46392.11732.1
Unique NamemRNA_H-elongata_contig46392.11732.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: D8LJG0_ECTSI (RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJG0_ECTSI)

HSP 1 Score: 503 bits (1296), Expect = 3.160e-176
Identity = 264/281 (93.95%), Postives = 269/281 (95.73%), Query Frame = 1
Query:    1 AVDVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            A DVSLGN  TEVRDLTRIERIGAHSHIRGLGLDDSLEPRD SQGLVGQH ARRATGVIYKMI+EGQIAGRAILLAGKPGTGKTAIAMGLAQALG DTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV    DTPVGGG+KTGRVTLCTTEMETVYDLGAKMIEALQKE +GAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGE+REQIDLKV +
Sbjct:    3 AADVSLGN--TEVRDLTRIERIGAHSHIRGLGLDDSLEPRDVSQGLVGQHAARRATGVIYKMIQEGQIAGRAILLAGKPGTGKTAIAMGLAQALGPDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPVGGGDKTGRVTLCTTEMETVYDLGAKMIEALQKEKVGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDLKVAE 281          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A835YPQ1_9STRA (RuvB-like helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ1_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 5.830e-166
Identity = 249/279 (89.25%), Postives = 261/279 (93.55%), Query Frame = 1
Query:    7 DVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            DVSLG   TEVRDLTRIERIGAHSHIRGLGLDD+LEPRD SQGLVGQH ARRA G++YKMI+EG IAGRAILLAGKPGTGKTA+AMGLAQALG DTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV    DTP GGG+KTGRVTLCTTEMETVYDLGAKMI+ALQKE + AGDV+TIDKASG+ITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIK E+REQID KV +
Sbjct:    5 DVSLGA--TEVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQHAARRAAGIVYKMIQEGHIAGRAILLAGKPGTGKTALAMGLAQALGKDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVEVQVDTPAGGGDKTGRVTLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKSEVREQIDAKVAE 281          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: W7TAI8_9STRA (RuvB-like helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAI8_9STRA)

HSP 1 Score: 466 bits (1198), Expect = 2.980e-161
Identity = 238/279 (85.30%), Postives = 258/279 (92.47%), Query Frame = 1
Query:    7 DVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            D+ LG   T  +DLTRIERIGAHSHIRGLGLDD+LEPR+ SQG+VGQ GARRA G++YKMI+EG+IAGRAILLAG+PGTGKTA+AMGLAQALG  TPFTTIAGSEIFSLEMSKTEA+TQAFRRSIGV+IMEETEIIEGEVV    DTP GGG KTGR+TLCTTEMETVYDLGAKMIEALQKE + AGDV+TIDKASGKI+KLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSRQQGFLALFAGDTGEIKGE+REQID+KV +
Sbjct:    3 DLGLGKETT--KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAE 279          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A7S1XS31_9STRA (RuvB-like helicase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XS31_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 1.240e-156
Identity = 236/280 (84.29%), Postives = 255/280 (91.07%), Query Frame = 1
Query:    7 DVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPV-GGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            DVSL  A  EVRDLTRIERIGAHSHIRGLGLDD+LEPR+ SQG+VGQ  ARRA GV+YKMI+EG+IAGRAILLAG+PGTGKTAIAMG+AQALG DTPF TIAGSEIFSLEMSKTEALTQAFRRSIGV+IMEETEIIEGEVV    DTP  G   K+GR+TLCTT+METVYDLG KMI+ALQKE + AGDV+TIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALF+GDTGEIK E+REQI+ KV +
Sbjct:   98 DVSLNAA--EVRDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAPARRAAGVVYKMIQEGKIAGRAILLAGQPGTGKTAIAMGIAQALGEDTPFNTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPAEGASEKSGRITLCTTDMETVYDLGTKMIDALQKEKVSAGDVITIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFSGDTGEIKSEVREQINAKVAE 375          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A6V1PUX3_HETAK (RuvB-like helicase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUX3_HETAK)

HSP 1 Score: 446 bits (1148), Expect = 1.050e-153
Identity = 232/271 (85.61%), Postives = 251/271 (92.62%), Query Frame = 1
Query:   34 EVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGGGN-KTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            EVRDLTR+ERIGAHSHIRGLGLDD+LEPR+ SQGLVGQ+ AR+A GVI+KMI+EG+IAGRAILLAGKPG+GKTA+AMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGV+IMEETEIIEGEVV    D P  G   KTGR+TLCTTEMETVYDLG KMI+ALQKE   AGDV+TIDKASG+IT+LGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIK E+REQID +V +
Sbjct:   10 EVRDLTRMERIGAHSHIRGLGLDDALEPREVSQGLVGQNTARKACGVIFKMIQEGKIAGRAILLAGKPGSGKTALAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQIDEPAAGQTEKTGRLTLCTTEMETVYDLGQKMIDALQKEKCSAGDVITIDKASGRITRLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKSEVREQIDARVAE 280          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A7R9YE57_9STRA (RuvB-like helicase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE57_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 2.840e-153
Identity = 234/282 (82.98%), Postives = 257/282 (91.13%), Query Frame = 1
Query:    1 AVDVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPV-GGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            A DV+L  A  EVRDLTRIERIGAHSHIRGLGLDD+LEPR+ SQG+VGQ  ARRA GV++KMI+EG+IAGRAILLAG+PG+GKTAIAMG+AQALG DTPF TIAGSEIFSLEMSKTEALTQAFRRSIGV+IMEETEIIEGEVV    DTPV G   K GR+TLCTT+METVYDLG+KMI++LQKE + AGDV+TIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALF+GDTGEIK E+REQI+ KV +
Sbjct:    4 ASDVNLNAA--EVRDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQGPARRAAGVVFKMIQEGKIAGRAILLAGQPGSGKTAIAMGIAQALGEDTPFNTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPVDGSAEKRGRITLCTTDMETVYDLGSKMIDSLQKEKVLAGDVITIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFSGDTGEIKAEVREQINAKVAE 283          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A7S2C2S5_9STRA (RuvB-like helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2S5_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 6.500e-153
Identity = 225/279 (80.65%), Postives = 253/279 (90.68%), Query Frame = 1
Query:    7 DVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            +VSLG    EVRDLTRIERIGAHSHIRGLGLDD+LEPRD SQG+VGQ  AR+A G++++MI+EG+IAGRA+LLAGKPGTGKTAIAMG+AQALG DTPFTTIA SEI+SLEMS TEALTQAFRRSIGV+I+EET++IEGEVV    D+ V G +KTGR+TLCTTEMETVYDLG +MIE+LQKE + AGDV+TIDKA+G+ITKLGRSFT SRDYDAMG QTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIK E+REQID KV +
Sbjct:   16 EVSLGTQ--EVRDLTRIERIGAHSHIRGLGLDDALEPRDTSQGMVGQKTARKAAGIVFRMIQEGRIAGRAVLLAGKPGTGKTAIAMGIAQALGEDTPFTTIAASEIYSLEMSTTEALTQAFRRSIGVRIVEETDMIEGEVVEIQVDSDVTGTDKTGRITLCTTEMETVYDLGPQMIESLQKEKVTAGDVITIDKAAGRITKLGRSFTHSRDYDAMGAQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKSEVREQIDTKVAE 292          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A812WEQ8_SYMMI (RuvB-like helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WEQ8_SYMMI)

HSP 1 Score: 442 bits (1138), Expect = 1.310e-152
Identity = 225/266 (84.59%), Postives = 246/266 (92.48%), Query Frame = 1
Query:   46 LTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGGGNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            +TR+ERIGAHSHIRGLGLDD+ EPR+ SQG+VGQ  AR+A GV+Y+MI+EG+IAGRAILLAGKPGTGKTA+AMGLAQALG DTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGV+IMEETEIIEGEVV    D P G G KTGR+TLCTTEMETVYDLGAKMI+ALQKE + AGDV+TIDKASG+I+KLGRSFTRSRDYDAMG QTRFVQCPEGELQKRKEVVH VSLHEIDVINSRQQGFLALFAGDTGEIK E+REQID+KV +
Sbjct:    1 MTRMERIGAHSHIRGLGLDDASEPREVSQGMVGQASARKACGVVYRMIQEGKIAGRAILLAGKPGTGKTALAMGLAQALGEDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDEPTGSGEKTGRLTLCTTEMETVYDLGAKMIDALQKEKVSAGDVITIDKASGRISKLGRSFTRSRDYDAMGAQTRFVQCPEGELQKRKEVVHTVSLHEIDVINSRQQGFLALFAGDTGEIKAEVREQIDMKVAE 266          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A7S4E9J7_9STRA (RuvB-like helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9J7_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 1.520e-152
Identity = 230/284 (80.99%), Postives = 251/284 (88.38%), Query Frame = 1
Query:    1 AVDVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGG---GNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            + DVS+  A+ +VR++TRIERIGAHSHIRGLGLDD LEPR  SQG+VGQH AR+A GV+YKMI EGQIAGRAILLAGKPGTGKTAIAMGLAQALG DTPFT+IAGSEIFSLEMSKTEALTQAFRRSIGV+IMEET+IIEGEVV    D P  G     KTGRVTLCTTEMETVYDLGA+MIEALQKE + AGDV++ID+AS ++TKLGRSFTRSRDYDAMGP  RFVQCPEGELQKRKEVVH VSLHEIDVINSR QGFLALFAGDTGEIK E+REQID KV +
Sbjct:    2 SADVSMPPASGDVREVTRIERIGAHSHIRGLGLDDCLEPRQVSQGMVGQHAARKAAGVVYKMIAEGQIAGRAILLAGKPGTGKTAIAMGLAQALGDDTPFTSIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETDIIEGEVVEIQTDQPAAGEAAAEKTGRVTLCTTEMETVYDLGARMIEALQKEKVSAGDVISIDRASHRVTKLGRSFTRSRDYDAMGPSVRFVQCPEGELQKRKEVVHTVSLHEIDVINSRAQGFLALFAGDTGEIKPEVREQIDAKVAE 285          
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Match: A0A397F0B8_9STRA (RuvB-like helicase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F0B8_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 2.900e-151
Identity = 226/272 (83.09%), Postives = 247/272 (90.81%), Query Frame = 1
Query:   31 TEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQHGARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVV----DTPVGG-GNKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEIREQIDLKVGQ 831
            TEVRD+TRIERIGAHSHIRGLGLDD+LEPR+ SQG+VGQ  AR+A G++ +MI EG+IAGRAILLAGKPGTGKTAIAMG+AQALG DTPFTTIAGSE+FSLEMSKTEALTQAFRRSIGV+IMEETEIIEGEVV    DTP GG G+K GR+TL TTEMETVYDLGAKMI+ L K  I AGDV+TI+K SGKI+KLGRSFTRS+DYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSR QGFLALFAGDTGEIK E+REQID KV +
Sbjct:    4 TEVRDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKGKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVSE 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46392.11732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJG0_ECTSI3.160e-17693.95RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835YPQ1_9STRA5.830e-16689.25RuvB-like helicase n=1 Tax=Tribonema minus TaxID=3... [more]
W7TAI8_9STRA2.980e-16185.30RuvB-like helicase n=3 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S1XS31_9STRA1.240e-15684.29RuvB-like helicase (Fragment) n=2 Tax=Phaeomonas p... [more]
A0A6V1PUX3_HETAK1.050e-15385.61RuvB-like helicase n=1 Tax=Heterosigma akashiwo Ta... [more]
A0A7R9YE57_9STRA2.840e-15382.98RuvB-like helicase n=2 Tax=Pinguiococcus pyrenoido... [more]
A0A7S2C2S5_9STRA6.500e-15380.65RuvB-like helicase (Fragment) n=1 Tax=Dictyocha sp... [more]
A0A812WEQ8_SYMMI1.310e-15284.59RuvB-like helicase n=1 Tax=Symbiodinium microadria... [more]
A0A7S4E9J7_9STRA1.520e-15280.99RuvB-like helicase n=1 Tax=Pelagomonas calceolata ... [more]
A0A397F0B8_9STRA2.900e-15183.09RuvB-like helicase n=2 Tax=Aphanomyces astaci TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46392contigH-elongata_contig46392:196..3245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score502.7
Seed ortholog evalue1.1e-139
Seed eggNOG ortholog2880.D8LJG0
KEGG koko:K11338,ko:K11374
GOsGO:0000123,GO:0000228,GO:0000491,GO:0000492,GO:0000785,GO:0000790,GO:0000812,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016043,GO:0016462,GO:0016569,GO:0016570,GO:0016573,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031011,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034622,GO:0034708,GO:0035097,GO:0035267,GO:0036211,GO:0042623,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044665,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0070603,GO:0071103,GO:0071339,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097255,GO:0097346,GO:0140097,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1904949,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.ATP-dependent 5'-3' DNA helicase activity
EggNOG OGsCOG1224@1,KOG2680@2759
Ec32 ortholog descriptionRuvB-like 2
Ec32 orthologEc-06_009970.1
EC3.6.4.12
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016,ko03036
Hectar predicted targeting categoryother localisation
Exons5
Model size831
Cds size831
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46392.11732.1prot_H-elongata_contig46392.11732.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46392 196..3245 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930768.6557863-CDS-H-elongata_contig46392:195..3181622930768.6557863-CDS-H-elongata_contig46392:195..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 196..318 -
1691679561.617813-CDS-H-elongata_contig46392:195..3181691679561.617813-CDS-H-elongata_contig46392:195..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 196..318 -
1622930768.680637-CDS-H-elongata_contig46392:614..7791622930768.680637-CDS-H-elongata_contig46392:614..779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 615..779 -
1691679561.6273873-CDS-H-elongata_contig46392:614..7791691679561.6273873-CDS-H-elongata_contig46392:614..779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 615..779 -
1622930768.6979296-CDS-H-elongata_contig46392:1140..12571622930768.6979296-CDS-H-elongata_contig46392:1140..1257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 1141..1257 -
1691679561.636576-CDS-H-elongata_contig46392:1140..12571691679561.636576-CDS-H-elongata_contig46392:1140..1257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 1141..1257 -
1622930768.7182-CDS-H-elongata_contig46392:1600..17501622930768.7182-CDS-H-elongata_contig46392:1600..1750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 1601..1750 -
1691679561.6476-CDS-H-elongata_contig46392:1600..17501691679561.6476-CDS-H-elongata_contig46392:1600..1750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 1601..1750 -
1622930768.7324598-CDS-H-elongata_contig46392:2969..32451622930768.7324598-CDS-H-elongata_contig46392:2969..3245Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 2970..3245 -
1691679561.667992-CDS-H-elongata_contig46392:2969..32451691679561.667992-CDS-H-elongata_contig46392:2969..3245Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46392 2970..3245 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46392.11732.1

>prot_H-elongata_contig46392.11732.1 ID=prot_H-elongata_contig46392.11732.1|Name=mRNA_H-elongata_contig46392.11732.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
AVDVSLGNANTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDASQGLVGQH
GARRATGVIYKMIREGQIAGRAILLAGKPGTGKTAIAMGLAQALGADTPF
TTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVDTPVGGG
NKTGRVTLCTTEMETVYDLGAKMIEALQKENIGAGDVMTIDKASGKITKL
GRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQ
GFLALFAGDTGEIKGEIREQIDLKVGQ
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mRNA from alignment at H-elongata_contig46392:196..3245-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46392.11732.1 ID=mRNA_H-elongata_contig46392.11732.1|Name=mRNA_H-elongata_contig46392.11732.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3050bp|location=Sequence derived from alignment at H-elongata_contig46392:196..3245- (Himanthalia elongata Himel1 dioecious)
GCTGTCGATGTCTCTCTGGGAAACGCCAACACCGAAGTGCGAGACCTCAC GCGCATCGAGCGCATCGGCGCGCACAGCCACATCCGCGGCCTGGGACTTG ACGACTCCCTCGAGCCGCGAGACGCCAGCCAGGGGCTGGTGGGGCAGCAC GGCGCTCGGCGGGCGACTGGCGTGATCTACAAGATGATTCGGGAGGGTCA GATCGCGGGGCGAGCGATTCTTCTCGCCGGAAAGCCTGGGACCGGGAAGA CGGCCATCGCGATGGGTTTAGCTCAGGTGCGCACTGCGGGGTTGATGTCG TGGAGAGAGTGGGGGGTGGGGGGGGGTACTTATGTTTAACGTCCTATCTT AACATGTCATACTCTATACCACGCATCCCACCAATGCCATAACGGATCGA TGTGCCAGGTTCTCGCCGGCTAGGTTGCATTGTACTATTTATAGGATGAT ACCAATTTACCTTTCGTTTGCTACGCGAAACCGGACATGCCGTGGGTTTG CTGGACACACTGGACACAACGGCTCACGAAATGGTAGTATGTATTGCCCA TTCAGCGGGCGTTATCGACTATGACTATGACTATACTCGAAGTATCGTAA AGGGAACTTTGAATCTCCCGCGTGAATGCATGAGTGCCGCATGCACACCA CATAAACATCAGACTGTAAATATGCCTCCTAAATACTCCTGGCGGACTAA TTCCAACAACCAACCATTGTTCAGCAGGCATCCTCCGCTCCCTATCGAAT AATCGTGTGAGACGTTTCGCCCCTTTTGGGGCTTCAACCTATGTCTCTGA TCTAGCTCACAGGAGACACTGTATGAACTCCCTCAGACCCTGTAAATAGC AGCTTTAGAGCTACTACCACGTCAAAAAAAAACACACCCGGAGGGATGTG GGGGGGGGGGATAGGCTAGAAATGTACAACTTACCGTGGTCCTAGCGTTT TTGCCTCTTGCTACGGCCGTGGAGAGAGACGGTCGGGGGTGTTGTGAGAG CTATCCAGCTGCGTGATAGTCCGTGGTGTAGGAATCCCGTATAGCTGGCG ACTCCACTGCCGTCGTTGGTACACAACCGCCTCAAGCCCAAGGTCTGTGT ATTGGGGGGCTTGGCTCACGATTGGTGTCACTGCCGTCGATATAGAGTGT GGAACGTCTCGGCGGCATCTAGGCGCGAATTTTGCCCTACCGTGAGTCGT GAAGCCTTTCCCCTTAGAAAGGGTCAGACGTGACGTGCCATCGGACATCA GGAGTACAAGGATTTCAAAGGCGTCCGGTGTAACGCCGGATGTTTAATAG CTTGCTTCGCCGGTGATTCCACCTATAATGAAGGTTATTCGTGACGTAAC GCCAGTGACACAAGCTCAAAGAGAGGCGTGGTATTGCTCCCCACTAAATA TCTCCGTGACGCATGTGTCGCCGCCTTCACCGCCCGCCCCCTCTTGTTTA TACGGTAATCCATGCGCGTTACCCCCTTCGCGTGCGCATTTACAGGCCTT GGGAGCCGACACGCCGTTTACAACGATCGCAGGGTCGGAGATATTTTCCT TGGAGATGTCGAAAACGGAGGCGCTGACCCAGGCGTTCCGACGCAGCATT GGCGTAAAGATCATGGAAGAGACGGAAATTATCGAGGGCGAGGTGGTAGA GATCCAGGCAAGGAGCCCGCCCTTGTTTAGTGACGATCGCGCTCCGTAGG TCTAAATCCCACAGTGGTGGCCTGTGAGCGCCTCGTAACTGAAATAAATT GCGCGCGAATTTGTAAACGCTGTTTTTGCGCGTTCAAGACTTTTTATAAC TTTCACGCCATAAGAGAAACGAGAGGAAGAAGATTGACTTGACTACGCCT TCGCGGTCAACATGCTCGTAGAAGGTTTTTGTGTCGGCTTAATTCGAAAC GGTAATGTAATGACATCACGATCACCGCTTCCCGTGTTCGTGTGACGGCC GCCCCCGCCTCGATCGCGCCTGCCTGCCTGCCTTCTAGGTGGACACGCCG GTGGGAGGAGGCAACAAGACAGGGCGCGTGACGCTGTGTACGACCGAGAT GGAAACGGTGTACGACCTCGGAGCGAAAATGATCGAGGCCTTGCAGAAGG AAAACGTGAGCAGGAAATCCGTAGTGGCGGCATGCTGTGCGGTATATCGA GTATGTGTGTGTGTTCTGATGCATGCCCCGTCCCCCGTCCCCTAACCCCT GGTGGGCGCACTCGCGGCAGATAAACCGTTGCGATTTTCCCTCGACACGT TTTTGCGTCCGTCGGGGCGTGCTGTTAAGAGTGCCCCAACTGCGCTCCAA CAATTGACCGTGTGTTGCGCAATTATTGTCTCTTACCTGGAGCGCTACGC ACCGTCTAGTGCTTACGCGGCCAAAACTGCTTGCTCTGAATACCGCGCAA CGGCTGATCGGTCGATCGGTCGCTTTTTGTGCATTGGCTTGTCGATTTTG ACAATGACAACCATAGATCGGCGCGGGAGACGTGATGACGATCGACAAGG CATCAGGAAAGATCACGAAGCTAGGCCGATCTTTCACGCGATCGAGGGAC TATGACGCCATGGGACCACAGACGCGCTTCGTGCAGTGCCCCGAAGGCGA GCTTCAGAAGCGCAAGGAGGTGGTACACGTGGTAAGCAGCGCGGAGCGTG ATATTTTCCGCAGAAATCCGACCATACCCCGGTCGCAATATTTTTTTGAT GCCTCCCGGGCCTGGAGTTGGTAACCGCGTCGATTTGGCATCCATGGTCA TCGGCCTTTAGGACACGTAGACTTCGCGACGATTTTTTTATATGCATTGT TTAATCGGGAAACGATACATTGATCGAACCATGTTAGCACCGACCGGACA CAAGAGTGCTTTCTCGTCGTACGTTGAAGACTTTATACCGAAAATTGTCC TTTGGCTCGTCGGTGGATGCTCCTTAGGTATCCCTCCACGAAATTGACGT GATCAATTCAAGGCAACAGGGCTTCCTGGCGCTCTTCGCGGGAGACACGG GCGAGATCAAGGGAGAAATTCGGGAGCAGATCGACTTGAAGGTGGGACAG
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Coding sequence (CDS) from alignment at H-elongata_contig46392:196..3245-

>mRNA_H-elongata_contig46392.11732.1 ID=mRNA_H-elongata_contig46392.11732.1|Name=mRNA_H-elongata_contig46392.11732.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at H-elongata_contig46392:196..3245- (Himanthalia elongata Himel1 dioecious)
GCTGTCGATGTCTCTCTGGGAAACGCCAACACCGAAGTGCGAGACCTCAC
GCGCATCGAGCGCATCGGCGCGCACAGCCACATCCGCGGCCTGGGACTTG
ACGACTCCCTCGAGCCGCGAGACGCCAGCCAGGGGCTGGTGGGGCAGCAC
GGCGCTCGGCGGGCGACTGGCGTGATCTACAAGATGATTCGGGAGGGTCA
GATCGCGGGGCGAGCGATTCTTCTCGCCGGAAAGCCTGGGACCGGGAAGA
CGGCCATCGCGATGGGTTTAGCTCAGGCTGTCGATGTCTCTCTGGGAAAC
GCCAACACCGAAGTGCGAGACCTCACGCGCATCGAGCGCATCGGCGCGCA
CAGCCACATCCGCGGCCTGGGACTTGACGACTCCCTCGAGCCGCGAGACG
CCAGCCAGGGGCTGGTGGGGCAGCACGGCGCTCGGCGGGCGACTGGCGTG
ATCTACAAGATGATTCGGGAGGGTCAGATCGCGGGGCGAGCGATTCTTCT
CGCCGGAAAGCCTGGGACCGGGAAGACGGCCATCGCGATGGGTTTAGCTC
AGGCCTTGGGAGCCGACACGCCGTTTACAACGATCGCAGGGTCGGAGATA
TTTTCCTTGGAGATGTCGAAAACGGAGGCGCTGACCCAGGCGTTCCGACG
CAGCATTGGCGTAAAGATCATGGAAGAGACGGAAATTATCGAGGGCGAGG
TGGCCTTGGGAGCCGACACGCCGTTTACAACGATCGCAGGGTCGGAGATA
TTTTCCTTGGAGATGTCGAAAACGGAGGCGCTGACCCAGGCGTTCCGACG
CAGCATTGGCGTAAAGATCATGGAAGAGACGGAAATTATCGAGGGCGAGG
TGGTGGACACGCCGGTGGGAGGAGGCAACAAGACAGGGCGCGTGACGCTG
TGTACGACCGAGATGGAAACGGTGTACGACCTCGGAGCGAAAATGATCGA
GGCCTTGCAGAAGGAAAACGTGGACACGCCGGTGGGAGGAGGCAACAAGA
CAGGGCGCGTGACGCTGTGTACGACCGAGATGGAAACGGTGTACGACCTC
GGAGCGAAAATGATCGAGGCCTTGCAGAAGGAAAACATCGGCGCGGGAGA
CGTGATGACGATCGACAAGGCATCAGGAAAGATCACGAAGCTAGGCCGAT
CTTTCACGCGATCGAGGGACTATGACGCCATGGGACCACAGACGCGCTTC
GTGCAGTGCCCCGAAGGCGAGCTTCAGAAGCGCAAGGAGGTGGTACACGT
GATCGGCGCGGGAGACGTGATGACGATCGACAAGGCATCAGGAAAGATCA
CGAAGCTAGGCCGATCTTTCACGCGATCGAGGGACTATGACGCCATGGGA
CCACAGACGCGCTTCGTGCAGTGCCCCGAAGGCGAGCTTCAGAAGCGCAA
GGAGGTGGTACACGTGGTATCCCTCCACGAAATTGACGTGATCAATTCAA
GGCAACAGGGCTTCCTGGCGCTCTTCGCGGGAGACACGGGCGAGATCAAG
GGAGAAATTCGGGAGCAGATCGACTTGAAGGTGGGACAGGTATCCCTCCA
CGAAATTGACGTGATCAATTCAAGGCAACAGGGCTTCCTGGCGCTCTTCG
CGGGAGACACGGGCGAGATCAAGGGAGAAATTCGGGAGCAGATCGACTTG
AAGGTGGGACAG
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