mRNA_H-elongata_contig46370.11729.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46370.11729.1
Unique NamemRNA_H-elongata_contig46370.11729.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 2.150e-104
Identity = 154/194 (79.38%), Postives = 170/194 (87.63%), Query Frame = 1
Query:    1 QVYDKGPSPYKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWLKARVPKKNENTPLESLVMGGVSKMLSTLVTYPTQVI 582
            QVYDKGPSPYKS+GTA RTI REEGARALYQGLGPALLGNAVAWGGFFY YE+IK    A  P   E +LG +HHL AGY+AGAMMV ATNP+WM+KTRMQLQDK + SG +RPY+G +DAVRTI REEGPLALYKGAVPAL+LCGQGAVQFAVYEWLKARVPK+NENTP ESL+MGG SK+LSTLVTYPTQ +
Sbjct:   70 QVYDKGPSPYKSLGTAFRTIIREEGARALYQGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQ--EADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQYL 261          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA)

HSP 1 Score: 254 bits (649), Expect = 3.360e-80
Identity = 142/265 (53.58%), Postives = 177/265 (66.79%), Query Frame = 1
Query:    1 QVYDKGPSPYKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQ--DKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWLKARVPKK-NENTPLESLVMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPR--YRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLK 780
            Q Y +G SPY S+ +A +TI  +EG RALY GL P++ G  +AWG +FY Y+  K    A+    G  +L   HHLTAG +    +V   NP+W+VKTR+QLQ  D     G  RPY G  DA+ TI REEG LALYKG VPA++L  QGA+QFA YEWLK  VP+   ++ P+ESLVMGG SK+ +++VTYPTQVIK+RLQ R       A A R  Y GT  C   I R+EG RGFF+GCVPYALRAAPASA+TF VYEE ++
Sbjct:   77 QAYHQGASPYASLSSAFKTIAEQEGWRALYAGLVPSVWGGGLAWGAYFYLYQMSKD---ALQTGTGAEQLNVSHHLTAGNI----LVLLGNPVWLVKTRLQLQTRDNTQRLGR-RPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQVIKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVVYEEAMR 333          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA)

HSP 1 Score: 228 bits (580), Expect = 7.120e-69
Identity = 125/277 (45.13%), Postives = 166/277 (59.93%), Query Frame = 1
Query:    1 QVYDKGPSPYKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQ--------------------DKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWLKARVPKKNENTPLESLVMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEE 771
            QVYD+   P+ S+   +++I ++EG R LY+GL PALL N ++WGG+FY YE  K R L         ++  +HHL + + AG +MVF TNP+W++KTRMQLQ                       S  G    Y G   A+RTIVREEG L LYKG +PAL+L   GA+QF  YEWLK +V +  +       V+GG++K+L+ LVTYP QV+K+RLQQR    +  A   RY  TW C   I R EGL GFFKGC+P  L+ AP++ ITF VYE+
Sbjct:  104 QVYDRAGRPFPSMYKGMQSIVQQEGYRGLYKGLTPALLANGLSWGGYFYFYEHAKNRYLRQ-----HRQITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLK-KVVEPYQAPVFSFSVLGGMAKILAGLVTYPPQVVKARLQQR----DTGASRWRYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLVYEQ 370          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA)

HSP 1 Score: 211 bits (538), Expect = 7.730e-65
Identity = 111/199 (55.78%), Postives = 136/199 (68.34%), Query Frame = 1
Query:    1 QVYDKGPSPYKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTI----RPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWLKARVPKK-NENTPLESLVMGGVSKMLSTLVTYPTQVI 582
            Q YDKG SPY+S+G A  TI ++ G   LY GLGPA+LG+ V+WGG+FY YE  K    ++  +    +LGP+HHLTAG  AG  +V  TNPIW+VKTRMQLQ       T     RPY G  DAV TIVREEG LALYKG VPAL+L GQGA+QFA YEWLKARVP+   +N P ESL+MG  SK+ ++LV  P  ++
Sbjct:   28 QAYDKGKSPYRSLGAAFTTIVKQNGWSGLYSGLGPAVLGSGVSWGGYFYLYEWAKT---SMRRFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXTAAAGRRPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTPNMLL 223          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A2R6S2L2_ACTCC (Folate transporter like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6S2L2_ACTCC)

HSP 1 Score: 208 bits (529), Expect = 1.380e-62
Identity = 121/267 (45.32%), Postives = 161/267 (60.30%), Query Frame = 1
Query:   28 YKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWL-KARVPKKNENTP-----------LESLVMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLKALML 792
            YK+   A+ TI R EG R LY G  PA+LG+ ++W  +F+ Y + K R L      G+ EL P+ HL +   AGA++ F TNP+W+VKTR+QLQ  L  +   RPY+G  DAV+TI+REEG  ALY+G VP L L   GA+QF  YE L KA +  ++E +            ++  ++G  SK+ + LVTYP QVI+SRLQQR +    KAG P Y  +WH      R EGLRGF+KG     L+  PA++ITF VYE VL  L L
Sbjct:   51 YKNTSQALWTIARTEGLRGLYAGFYPAVLGSTISWSLYFFFYSKAKQRYLK-----GKQELTPVLHLASAAEAGALVCFCTNPLWLVKTRLQLQTPLHQT---RPYSGLYDAVKTILREEGWTALYRGLVPGLFLVTHGAIQFTAYEELRKAVIDFRSEESEEEFSGVELLNTIDYAMLGASSKLAAILVTYPFQVIRSRLQQRPS----KAGIPIYMDSWHAIKETARFEGLRGFYKGITANLLKNVPAASITFVVYENVLNMLKL 305          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A6P4A874_ZIZJJ (folate transporter 1, chloroplastic isoform X1 n=6 Tax=Rhamnaceae TaxID=3608 RepID=A0A6P4A874_ZIZJJ)

HSP 1 Score: 208 bits (529), Expect = 1.590e-62
Identity = 124/269 (46.10%), Postives = 164/269 (60.97%), Query Frame = 1
Query:   28 YKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVL-CGQGAVQFAVYEWL----------KARVPKKNENTPLESL---VMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLKALML 792
            YK+   AI TI R EG R LY G  PA+LG+ ++WG +F+ Y+R K R    +    E +L P HHL +   AGA++ F TNP+W+VKTR+QLQ+ L  +   +PY+G  DA+RTI+REEG  ALYKG VP+L L    GA+QF VYE L          K+    ++  T L S+    +G  SK+++ LV+YP QVI++RLQQR   E    G PRY  +WH      R EGLRGF+KG  P  L+  PA++ITF VYE VL  L L
Sbjct:   53 YKNTAHAIFTIARLEGLRGLYAGFYPAVLGSTLSWGLYFFFYDRAKQR----YSKNREEKLSPGHHLASAAEAGALVSFCTNPVWLVKTRLQLQNPLHQT---QPYSGFHDALRTIMREEGWKALYKGIVPSLFLQVSHGAIQFTVYEELRKVVVDLKSRKSTESSESSETVLNSIDYAALGASSKIVAILVSYPFQVIRARLQQRPGIE----GIPRYMDSWHVVKETARFEGLRGFYKGITPNLLKNVPAASITFVVYENVLNLLKL 310          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A834TUP4_9FABA (Folate transporter 1, chloroplastic isoform X1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TUP4_9FABA)

HSP 1 Score: 207 bits (527), Expect = 2.920e-62
Identity = 119/268 (44.40%), Postives = 161/268 (60.07%), Query Frame = 1
Query:   28 YKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWLK----------ARVPKKNENTPLESL---VMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLKALML 792
            YK+   AI TI R EG R LY G  PA+LG+ ++WG +F+ Y++ K R    +    + +LGP +HL +   AGA++   TNP+W+VKTRMQLQ  L  +   +PY G  DA +TI+REEG  ALY+G VP L L   GA+QF  YE L+          + +  +N +  L S    V+G  SK+ + L+TYP QV++SRLQQR + +    G PRY  +WH      R EG+RGF+KG  P  L+  PAS+ITF VYE VLK L L
Sbjct:   51 YKNTAHAIFTIARSEGLRGLYAGFLPAVLGSTISWGLYFFFYDKAKQR----YARNKDEKLGPGYHLASAAEAGALVCLCTNPVWLVKTRMQLQTPLHQT---QPYNGLYDAFKTIMREEGLRALYRGIVPGLFLVSHGAIQFTAYEELRKVIVDLKSKESEIHHQNPDKLLNSADYAVLGATSKVAAILLTYPFQVVRSRLQQRPSID----GIPRYMDSWHVMKETARFEGVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKL 307          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A1S3B2N4_CUCME (folate transporter 1, chloroplastic isoform X1 n=12 Tax=Cucurbitaceae TaxID=3650 RepID=A0A1S3B2N4_CUCME)

HSP 1 Score: 207 bits (526), Expect = 3.460e-62
Identity = 128/281 (45.55%), Postives = 166/281 (59.07%), Query Frame = 1
Query:    1 QVYDKGPS---PYKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVL-CGQGAVQFAVYEWLK----------ARVPKKNENTPLES---LVMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLKALML 792
            QVYD   S    YK+   AI TI R EG R LY G  PA+LG+ V+WG +F+ Y R K R    +   G+ +L P  HL +   AGA++ F TNP+W+VKTRMQLQ  L  +   +PY+G  DA RTI+REEG  ALYKG VP L+L    GA+QF VYE L+           RV  ++    L S    V+GG SK+ + L+TYP QVI++RLQQR   +    G PRY  ++H      R EG+RGF++G  P  L+  PA++ITF VYE VL  L L
Sbjct:   32 QVYDGRGSNLPTYKNTVNAILTITRMEGLRGLYAGFYPAVLGSTVSWGLYFFFYGRAKQR----YSDSGKKDLSPSLHLASAAEAGALVCFCTNPVWLVKTRMQLQSPLHQA---QPYSGLYDAFRTILREEGFAALYKGIVPGLMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELLNSGDYAVLGGTSKIAAMLLTYPFQVIRARLQQRPGHD----GIPRYMDSFHVLKETARFEGIRGFYRGITPNLLKNVPAASITFIVYENVLNLLKL 301          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A6N2LAC1_SALVM (Uncharacterized protein n=9 Tax=Saliceae TaxID=238069 RepID=A0A6N2LAC1_SALVM)

HSP 1 Score: 207 bits (528), Expect = 3.980e-62
Identity = 124/269 (46.10%), Postives = 165/269 (61.34%), Query Frame = 1
Query:   28 YKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAVQFAVYEWL-------KARVPKKN----ENTPLESL---VMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLKALML 792
            YK+   AI  I R EG + LY G  PA+LG+ V+WG +F+ Y R K R    +    + +L P  HL +   AGA++ F TNP+W+VKTR+QLQ+ L  +   RPY+G  DAV+TI+REEG  ALYKG VP+L L   GA+QF  YE L       KA+  K++    ++  L S+   ++GG SK+ + ++TYP QVI+SRLQQR + E    G PRY  +WH      R EG RGF+KG  P  L+  PAS+ITF VYE VLK L L
Sbjct:   73 YKNTAHAILNIARLEGLKGLYAGFFPAVLGSTVSWGLYFFFYSRAKQR----YSKNRDEKLSPGLHLASAAEAGALVCFCTNPLWLVKTRLQLQNPLHQT---RPYSGLYDAVKTIMREEGWRALYKGIVPSLFLVSHGALQFTAYEELRKVIVDFKAKQRKEDCKIADSQLLNSVDYAILGGSSKIAAIILTYPFQVIRSRLQQRPSME----GIPRYMDSWHVMKETARFEGFRGFYKGMTPNLLKNVPASSITFIVYENVLKLLKL 330          
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Match: A0A7J7CVJ8_TRIWF (Folate transporter 1 chloroplastic-like isoform X1 n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CVJ8_TRIWF)

HSP 1 Score: 206 bits (523), Expect = 1.270e-61
Identity = 124/269 (46.10%), Postives = 160/269 (59.48%), Query Frame = 1
Query:   28 YKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYSYERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRMQLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVL-CGQGAVQFAVYEWLKARV----PKKNENTP---------LESLVMGGVSKMLSTLVTYPTQVIKSRLQQRGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAITFAVYEEVLKALML 792
            YK+   AI TI R EG + LY G  PA+ G+ V+W  +F+ Y R K R    +       L P  HL +   AGA++   TNPIW+VKTR+QLQ  L  S   RPY+G  DA+RTI+REEG  ALYKG  P+L+L    GAVQF VYE L+  +     K +E  P          +  ++GG SK+ + L+TYP QVI++RLQQR N +    G PRY  +WH      R EG+RGF+KG VP  L+ APAS+ITF VYE V+K L L
Sbjct:   53 YKNTAHAILTIARSEGLKGLYAGFYPAVFGSTVSWALYFFFYGRAKER----YSRNRSEALSPGLHLASAAEAGALVSLCTNPIWLVKTRLQLQTPLHHS---RPYSGLYDALRTIMREEGWSALYKGLGPSLILQVSHGAVQFTVYEELRKVICNLKSKGSEQKPETADDLLNSFDYAMLGGTSKVAAILLTYPFQVIRARLQQRPNTD----GTPRYMDSWHVMKQTARFEGIRGFYKGIVPNLLKNAPASSITFIVYENVMKLLRL 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46370.11729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB8_ECTSI2.150e-10479.38Folate transporter n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YH58_9STRA3.360e-8053.58Mitochondrial carrier domain-containing protein n=... [more]
W7T4J3_9STRA7.120e-6945.13Mitochondrial folate transporter carrier-like prot... [more]
A0A836CHG8_9STRA7.730e-6555.78Folate transporter (Fragment) n=1 Tax=Tribonema mi... [more]
A0A2R6S2L2_ACTCC1.380e-6245.32Folate transporter like n=1 Tax=Actinidia chinensi... [more]
A0A6P4A874_ZIZJJ1.590e-6246.10folate transporter 1, chloroplastic isoform X1 n=6... [more]
A0A834TUP4_9FABA2.920e-6244.40Folate transporter 1, chloroplastic isoform X1 n=1... [more]
A0A1S3B2N4_CUCME3.460e-6245.55folate transporter 1, chloroplastic isoform X1 n=1... [more]
A0A6N2LAC1_SALVM3.980e-6246.10Uncharacterized protein n=9 Tax=Saliceae TaxID=238... [more]
A0A7J7CVJ8_TRIWF1.270e-6146.10Folate transporter 1 chloroplastic-like isoform X1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46370contigH-elongata_contig46370:88..3379 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.2
Seed ortholog evalue1.4e-83
Seed eggNOG ortholog2880.D7FQB8
Preferred nameSLC25A32
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K02935,ko:K15115
KEGG TC2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03010,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03010
KEGG ModuleM00178
GOsGO:0001505,GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008517,GO:0009069,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015075,GO:0015215,GO:0015230,GO:0015238,GO:0015318,GO:0015605,GO:0015711,GO:0015748,GO:0015849,GO:0015883,GO:0015884,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0017144,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0034641,GO:0035350,GO:0035461,GO:0042133,GO:0042221,GO:0042493,GO:0042558,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046483,GO:0046655,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051186,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098573,GO:0098656,GO:0098838,GO:1901360,GO:1901564,GO:1901605,GO:1901679,GO:1903825,GO:1904947,GO:1905039,GO:1990542,GO:1990548
EggNOG free text desc.Belongs to the mitochondrial carrier (TC 2.A.29) family
EggNOG OGsKOG0764@1,KOG0764@2759
EC1.4.3.21
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko02000,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-01_006700.1
Exons6
Model size807
Cds size807
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46370.11729.1prot_H-elongata_contig46370.11729.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46370 88..3379 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930768.3479283-CDS-H-elongata_contig46370:87..3181622930768.3479283-CDS-H-elongata_contig46370:87..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 88..318 -
1691679561.5148194-CDS-H-elongata_contig46370:87..3181691679561.5148194-CDS-H-elongata_contig46370:87..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 88..318 -
1622930768.3769252-CDS-H-elongata_contig46370:857..9291622930768.3769252-CDS-H-elongata_contig46370:857..929Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 858..929 -
1691679561.526912-CDS-H-elongata_contig46370:857..9291691679561.526912-CDS-H-elongata_contig46370:857..929Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 858..929 -
1622930768.3943405-CDS-H-elongata_contig46370:1518..16641622930768.3943405-CDS-H-elongata_contig46370:1518..1664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 1519..1664 -
1691679561.5353112-CDS-H-elongata_contig46370:1518..16641691679561.5353112-CDS-H-elongata_contig46370:1518..1664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 1519..1664 -
1622930768.4070618-CDS-H-elongata_contig46370:2094..22611622930768.4070618-CDS-H-elongata_contig46370:2094..2261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 2095..2261 -
1691679561.5454357-CDS-H-elongata_contig46370:2094..22611691679561.5454357-CDS-H-elongata_contig46370:2094..2261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 2095..2261 -
1622930768.4342384-CDS-H-elongata_contig46370:2549..26471622930768.4342384-CDS-H-elongata_contig46370:2549..2647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 2550..2647 -
1691679561.5538757-CDS-H-elongata_contig46370:2549..26471691679561.5538757-CDS-H-elongata_contig46370:2549..2647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 2550..2647 -
1622930768.4547737-CDS-H-elongata_contig46370:3286..33791622930768.4547737-CDS-H-elongata_contig46370:3286..3379Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 3287..3379 -
1691679561.5622704-CDS-H-elongata_contig46370:3286..33791691679561.5622704-CDS-H-elongata_contig46370:3286..3379Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46370 3287..3379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46370.11729.1

>prot_H-elongata_contig46370.11729.1 ID=prot_H-elongata_contig46370.11729.1|Name=mRNA_H-elongata_contig46370.11729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
QVYDKGPSPYKSVGTAIRTIFREEGARALYQGLGPALLGNAVAWGGFFYS
YERIKVRALAVWPYGGETELGPLHHLTAGYLAGAMMVFATNPIWMVKTRM
QLQDKLSISGTIRPYAGPVDAVRTIVREEGPLALYKGAVPALVLCGQGAV
QFAVYEWLKARVPKKNENTPLESLVMGGVSKMLSTLVTYPTQVIKSRLQQ
RGNEEEVKAGAPRYRGTWHCTTTIVRREGLRGFFKGCVPYALRAAPASAI
TFAVYEEVLKALMLRPAI*
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mRNA from alignment at H-elongata_contig46370:88..3379-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46370.11729.1 ID=mRNA_H-elongata_contig46370.11729.1|Name=mRNA_H-elongata_contig46370.11729.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3292bp|location=Sequence derived from alignment at H-elongata_contig46370:88..3379- (Himanthalia elongata Himel1 dioecious)
CAGGTTTACGACAAGGGGCCGTCGCCGTACAAGTCAGTGGGGACAGCGAT CCGCACGATCTTCAGGGAGGAGGGAGCACGGGCGCTTTATCAGGTCAACT CCAAGGCCCGGTAACCAACCCGATCAGACCGTAGCCGAGCCGAGCCGTGG TGTGTCTCGACAAGAGCGCCGATGGCTCCGTAGATCGGTTGGTCTGCAGC GAGGCGGGAGTTGTAGAGAGTCTCGTGGCTTTCTTCGTGGCGTCGTGACG CAGAACCCACGACGGTAATGCCCAGTTAAACGGCAAGAAATCATCACCCG ACCTAGCTGCGATGTTGGACGAATTATCGCCGACCGCCTCCTTCCCGGCT GCGCGAAACACCACCGAAGTCGACTCGAGAGCTGGGCCTTCCGAGACTTT ATTTGTTGTTTTTTTCTCTCTTAATTTTTTTGTGACATGCACGCAACGGT AGCTGCGGTTGTGCGTGCGTTACCCCATCCCCCGCAAAGGGAGGGTCGAC AAAGACGTGCTCTTGCATCTTGCATGGCATTCATTGTGTGGCTTTCGACG AGTTGTGTCTCCTACCGTAGTGAATCCCCCGGCCTCCTCGGGGTACCTCT CAAAGAAACAAGTAGACGTTTTTCGTACGTCCTGGATAACAACGGAACCA TGTGTTGGGGACAAGCAGCCCTCCCCATCCCTACCACCCGCCTCGTTATT TTTGTTGTTGTATACCTCCCTCTGTCGTCTAGGGGCTGGGTCCGGCGTTG CTCGGAAACGCTGTCGCCTGGGGCGGGTTCTTCTACTCCTACGAAAGGAT CAAGGTGCGTGCGCTCGCTGTGTGGCCCTAGTATAGTATAATATAGTATA CTAATGATTTGAGACCCTTGTGCCGGCGCGGAAACCGTTTGAGGTCGAGG TGGCTCTTCTCGTTCTCCGTTCCTGGTGAACACACGGCAGGAGGCATGAG GCATTAGCTGGAAGGAAGAACTTTGTGGGTGATGAGCACAGCGGACCCCA ACCGCGTAGGGGGAAGGAGAGTATAGGATCGTTTCCCACAGGAGAAATGC ATCATGAAGGCTGTCGAGGCGTTTTCTTTCCCCCACTGTTTTTGTCACCA GATGTTGATAGGCGGCAGCGGAGGGGAGACCGAGCTGGGTCCTTTGCATC ACCTCACCGCGGGATACCTCGCTGGAGCGATGATGGTGTTCGCCACGAAC CCCATTTGGATGGTGAAGACGAGAATGCAGCTTCAGGACAAGCTCTCGAT ATCGGGAACGATTCGTCCCTACGCAGGACCCGTAGGTTGGTTGCCACATC GACAGACCGTGACCATGGTTTGTATCGATTGGCGCCCGTCTGACGAATCT TTACTTAACTGTGTCATGCAGGGCCGTTGGTTTTCGTAGTATAGTGTAGT GTACTACAGGACGCTTGCGAAAACGAAGAAGAAAATGGTCTTGTTCGCAA GCACGCCTTCAGTTTGCAATCCAAGTCCCTTCCGTGTGTTTTGTGATGTG TCTGTTTGTTTTTTTGTCTTGTTGCTGGTTCTACTCGGTCATTTCTAGAC CTACTCCTTTCTCGATCATCCCAGGGGTAGTTCTGGGAGACCGGGGTGTA CTTGGGTGGTGCGAAGACTGATCGATATGGGCCGTGTTGTCTAACGCGGC TCAGCTCTCGTCGCCGCGTACGTATTTGTTTATAACGCGATCGACGGTGT ATCTTCCTTGGGCAGACGCGGTGCGAACGATCGTCCGAGAGGAAGGGCCG CTTGCGCTGTACAAGGGAGCAGTGCCTGCGCTAGTGCTGTGTGGGCAGGG AGCGGTACAGTTTGCTGTCTACGAGTGGCTCAAGGCAAGGGTGCCGAAGA AGAACGAGAATGTGAGCCGAGACATCGTGCAGGCCCTCTCGTCGCGGCGC TCTCTGATGGGCCATCGATGCTCTGTAGCAGTAACATATTGGTTGTTTCG GCCACGCCATGATGAGGCTGGCAGGGACGTGTGGATAATTTTCTAGGATA CACCGATGAGATTGAGGCGGGCGGCGCGGCGCTATAACAATGTCAACAAC GCGACCGCGCAACGCAGCGAGTGGAAACATCGTTGTGCAGAACACATACC CAACGAATTCGGCCGATCGCCGCGGTAACGGTGCGGTATAGTAATGTGGG AATGGCACTGCGCTTCAGCGGCCGCCTGTTCGCTTGCGCCTGTATCTTAC GGTGTCCTCTGCCCGCAGCCTCGGCCAGAGAAAGGTGGGATCCTTTCAGT CAACAATGGACATGCCACTCGCTGCCGGTTACAGTGGTAGCAGGGGAGGG GGATATCTGGGTAGGACTCGCTCGATTTTTTTTTACTGCCATTCTCGTGT GTCGAGCGACTCGTTGCACGCCGCCTATTAATAGTCGATCAAGAGCAACA TTCCCTCAACCCTCCTACCGATCGATGTCCGCCTCTTTCGTGAATTCAAG ACGCCACTCGAGTCCCTTGTGATGGGTGGGGTCTCCAAGATGTTGTCCAC TCTGGTGACCTACCCTACCCAGGTGAGACTTTTGTTTTATGAACACCTCG GCCGCATCCTGCCGCAGATCCGGAACAACCCATCCCGATCCATTATACTG TACCTAAAATTAGAAGAAAAAGTGGCCAATCTTCCCGAGGCGGCTGCGCG GACCAAATTTGGAATGAGTTTAGTGCGTGCGCGATTTTTTTGTTTAATGT CACCGCATCACAGAGAGATATTGGCCGTCCCTGTCGTTCTGGAGATGACG TGCTCCAAACACGCAACATCATTGCGTCACCAGGCTCGTGACTCGCCTCT CACGCCTCTGATGGTACATTCTTTTTAACACTTGAAAACTTGGAAGTTTC CATTACTTGAGTTTAGCAGGGCGAACAGCATATTTTAATATATATATATA TATATATTTACACATGAACTTATTAGAGCCCTCCGAACATCCACGCCTTC TTAGCACCATGAGAGGTGTAGTCCAGGGGACCATATATATTTGCTTTGTT TTGCCTTTTCTTTCACCTGAGGTCGCGCCTTCTCTTTCGTCGAACTTAAC TTGAGTCGAAGGTGATAAAATCTCGCCTGCAGCAGCGAGGCAACGAGGAA GAGGTAAAGGCTGGCGCGCCGCGCTACCGCGGAACGTGGCACTGCACGAC GACGATAGTCCGAAGAGAGGGATTACGAGGCTTTTTCAAGGGGTGCGTCC CGTACGCGCTCAGAGCCGCTCCCGCCTCCGCGATTACATTCGCCGTGTAC GAGGAGGTGTTAAAGGCGTTGATGCTCAGGCCGGCCATTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig46370:88..3379-

>mRNA_H-elongata_contig46370.11729.1 ID=mRNA_H-elongata_contig46370.11729.1|Name=mRNA_H-elongata_contig46370.11729.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1614bp|location=Sequence derived from alignment at H-elongata_contig46370:88..3379- (Himanthalia elongata Himel1 dioecious)
CAGGTTTACGACAAGGGGCCGTCGCCGTACAAGTCAGTGGGGACAGCGAT
CCGCACGATCTTCAGGGAGGAGGGAGCACGGGCGCTTTATCAGCAGGTTT
ACGACAAGGGGCCGTCGCCGTACAAGTCAGTGGGGACAGCGATCCGCACG
ATCTTCAGGGAGGAGGGAGCACGGGCGCTTTATCAGGGGCTGGGTCCGGC
GTTGCTCGGAAACGCTGTCGCCTGGGGCGGGTTCTTCTACTCCTACGAAA
GGATCAAGGTGCGTGCGCTCGCTGTGTGGCCCTAGGGCTGGGTCCGGCGT
TGCTCGGAAACGCTGTCGCCTGGGGCGGGTTCTTCTACTCCTACGAAAGG
ATCAAGGTGCGTGCGCTCGCTGTGTGGCCCTACGGAGGGGAGACCGAGCT
GGGTCCTTTGCATCACCTCACCGCGGGATACCTCGCTGGAGCGATGATGG
TGTTCGCCACGAACCCCATTTGGATGGTGAAGACGAGAATGCAGCTTCAG
GACAAGCTCTCGATATCGGGAACGATTCGTCCCTACGCAGGACCCGTAGC
GGAGGGGAGACCGAGCTGGGTCCTTTGCATCACCTCACCGCGGGATACCT
CGCTGGAGCGATGATGGTGTTCGCCACGAACCCCATTTGGATGGTGAAGA
CGAGAATGCAGCTTCAGGACAAGCTCTCGATATCGGGAACGATTCGTCCC
TACGCAGGACCCGTAGACGCGGTGCGAACGATCGTCCGAGAGGAAGGGCC
GCTTGCGCTGTACAAGGGAGCAGTGCCTGCGCTAGTGCTGTGTGGGCAGG
GAGCGGTACAGTTTGCTGTCTACGAGTGGCTCAAGGCAAGGGTGCCGAAG
AAGAACGAGAATACGCGGTGCGAACGATCGTCCGAGAGGAAGGGCCGCTT
GCGCTGTACAAGGGAGCAGTGCCTGCGCTAGTGCTGTGTGGGCAGGGAGC
GGTACAGTTTGCTGTCTACGAGTGGCTCAAGGCAAGGGTGCCGAAGAAGA
ACGAGAATACGCCACTCGAGTCCCTTGTGATGGGTGGGGTCTCCAAGATG
TTGTCCACTCTGGTGACCTACCCTACCCAGACGCCACTCGAGTCCCTTGT
GATGGGTGGGGTCTCCAAGATGTTGTCCACTCTGGTGACCTACCCTACCC
AGGTGATAAAATCTCGCCTGCAGCAGCGAGGCAACGAGGAAGAGGTAAAG
GCTGGCGCGCCGCGCTACCGCGGAACGTGGCACTGCACGACGACGATAGT
CCGAAGAGAGGGATTACGAGGCTTTTTCAAGGGGTGCGTCCCGTACGCGC
TCAGAGCCGCTCCCGCCTCCGCGATTACATTCGCCGTGTACGAGGAGGTG
TTAAAGGCGTTGATGCTCAGGCCGGCCATTTAAGTGATAAAATCTCGCCT
GCAGCAGCGAGGCAACGAGGAAGAGGTAAAGGCTGGCGCGCCGCGCTACC
GCGGAACGTGGCACTGCACGACGACGATAGTCCGAAGAGAGGGATTACGA
GGCTTTTTCAAGGGGTGCGTCCCGTACGCGCTCAGAGCCGCTCCCGCCTC
CGCGATTACATTCGCCGTGTACGAGGAGGTGTTAAAGGCGTTGATGCTCA
GGCCGGCCATTTAA
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