mRNA_H-elongata_contig46308.11721.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46308.11721.1
Unique NamemRNA_H-elongata_contig46308.11721.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: D8LGP8_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGP8_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 8.300e-102
Identity = 139/206 (67.48%), Postives = 174/206 (84.47%), Query Frame = 1
Query:    1 QRWRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRFR-GDFDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEASDSSG-TGPKISLAIVPNSGHQLFL 612
            +RWR+AN ++KM+LCGHSLGGYL V YAEKYPQR++KLVL SPVGFPEEPE F   I+ RPFAQRN +KF+ WGW KGITPGDVVRT+GPLGY+MMM Y+ +RF+  +FD+ A+G+YLYHN AAT GSGERAL  +LKPGAWAHSPL+HRLP +DPS+PVHF+FG+ DWM+S A +EL E++ + G +G +I++  VPN+GHQLFL
Sbjct:  197 ERWRQANEVDKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEEPEGFREAIESRPFAQRNLMKFVGWGWAKGITPGDVVRTMGPLGYRMMMGYSNRRFQQAEFDKRALGDYLYHNLAATHGSGERALSRVLKPGAWAHSPLKHRLPKLDPSVPVHFMFGDRDWMNSTAPQELLESARADGGSGQEITITTVPNAGHQLFL 402          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A835ZEV4_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV4_9STRA)

HSP 1 Score: 231 bits (588), Expect = 7.770e-72
Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 1
Query:    1 QRWRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRFR--GDFDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEASDSSGTGPKISLAIVPNSGHQLFL 612
            +RWR AN + +MILCGHSLGGYL VAYAE+YP+R+ KL+LVSPVG P  PE+F   + Q+P+ +R  L    + W +G+TPGD+VR LGP+G ++M  YA +RF+  G+ DR A G YLYHN+AAT GSGERAL ELL P AWA SPL  R+P +  +IP+HF++GE DWMD   A +++E   ++ T   +++  +  +GHQ+F+
Sbjct:  114 ERWRDANKVQRMILCGHSLGGYLSVAYAERYPERVAKLILVSPVGVPHRPEEFTNHLAQQPWGRRTLLNSAAFLWSRGVTPGDLVRGLGPIGRRLMDGYAQRRFKDGGELDRTAFGEYLYHNAAATAGSGERALSELLLPYAWAKSPLHDRIPKLSRTIPIHFVYGEVDWMDHRHALKVREQMVATHT---VTVETIAGAGHQVFI 316          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A7S4DX92_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DX92_9EUKA)

HSP 1 Score: 176 bits (447), Expect = 2.220e-50
Identity = 94/207 (45.41%), Postives = 129/207 (62.32%), Query Frame = 1
Query:    7 WRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQR-PFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRF-RGDF-DREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPS--IPVHFIFGEHDWMDSPAARELKEASDSSGTGPKISLAIVPNSGHQLFL 612
            WR A  ++KM+LCGHSLGGYL  AYAE+YP R+E LVL+SP G P EPE F + ++ R P+  R  L  +   W  G+TPG VVR +GP G   + +   +RF  G+  D EA+ +Y Y N  A +GSGE AL ++L+P AWAHSPL  R+  +       + FI+G+HDWMD   A  +++A+ S      I + +VP +GHQL L
Sbjct:  168 WRAAQKIDKMVLCGHSLGGYLSFAYAERYPSRVEHLVLLSPAGVPHEPEGFRSRLNARLPWLARALLPVVTTAWSAGVTPGSVVRVMGPYGRGFVESLVRRRFGEGETRDLEALADYAYLN-VALEGSGEHALSQILRPFAWAHSPLCDRIEGLRQRGVTDISFIYGDHDWMDHTHALAVQKANPSV----PIEVKVVPRAGHQLQL 369          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A250WWB7_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWB7_9CHLO)

HSP 1 Score: 174 bits (442), Expect = 2.360e-49
Identity = 98/213 (46.01%), Postives = 126/213 (59.15%), Query Frame = 1
Query:    7 WRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQRPFAQRNFL-KFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRFR------GDFDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEASDSSGTGPKIS----LAIVPNSGHQLFL 612
            WR   GL+K +L GHSLGGYL   YA KYPQ +  L+LV P G PE PE++ + I Q     R  L K   W W+KG+TPG V+RTLGPLG +++  Y + RFR       D +      Y Y   AA  GSGE AL  LL PGAWAH+PL+HRL  +  ++PV FI+GE DWM    A +L E      + PK+     + I+PN+GH +FL
Sbjct:  149 WRIKMGLDKFLLMGHSLGGYLSACYALKYPQHVSHLLLVCPAGVPEAPENWQSNIMQNATNTRKTLFKTFVWAWEKGVTPGSVIRTLGPLGPRLIDGYVSNRFRQHGQPLNDNEYNIFKRYFYQIIAAP-GSGEYALRHLLAPGAWAHAPLEHRLHEL--TVPVTFIYGEEDWMQPKHAVKLCERLKEERS-PKVESDLKVEIIPNAGHFVFL 357          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A7R9V5E0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V5E0_9CHLO)

HSP 1 Score: 165 bits (418), Expect = 1.070e-45
Identity = 90/211 (42.65%), Postives = 121/211 (57.35%), Query Frame = 1
Query:    7 WRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRFR--GD---FDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAA----RELKEASDSSGTGPKISLAIVPNSGHQLFL 612
            W+   G+ KM+L GHSLGGYL   YA KYP+ +E L+LV P G P+ P+D+       P ++R   K L W W +G+TPG VVRTLGP G  +   Y   RF   GD    D  A+ +  ++   A  GSGE AL  LL PGAWAH+PL+ RL  +  S+PV F++GE DWM    A    + L+E      T  K  + I+ ++GH +FL
Sbjct:  147 WKSKMGVGKMVLMGHSLGGYLSACYALKYPEDVEHLILVCPAGVPQVPDDWQTRFQTMPTSRRMLFKTLMWTWDQGLTPGAVVRTLGPFGPGLCKGYVNSRFNRGGDGLTADEAAVFHRYFYQITAAPGSGEYALRHLLAPGAWAHAPLERRLHEL--SVPVTFVYGEGDWMRPEHAVNLCKRLREDGAPLCTSDKR-VEIIDDAGHFVFL 354          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A0L0HQ88_SPIPD (AB hydrolase-1 domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HQ88_SPIPD)

HSP 1 Score: 163 bits (413), Expect = 1.040e-44
Identity = 92/206 (44.66%), Postives = 121/206 (58.74%), Query Frame = 1
Query:    1 QRWRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRFR--GDFDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEASDSSGTGPKISLAIVPNSGHQLFL 612
            ++WR+ANG++ M L GHSLGGYL   YA K+P+R+EKLVLVSP G  + PE   A + +R F    F     W W   +TP  V+RT+GP G  ++  Y ++RF      D + + +Y+YH SA T GSGE AL  LL PGAWA  PL  RL N+   +P  F++G HDWMD  AA      S   G      +A V +SGH L+L
Sbjct:  232 EKWREANGIDSMTLMGHSLGGYLSACYALKHPERVEKLVLVSPAGVGKIPEGQEAALRRRGFLPALFTTL--WSWN--VTPMSVIRTMGPWGPSLVRKYTSRRFAYLDQSDADDLHSYIYHISAQT-GSGEFALARLLLPGAWARKPLHDRLANL--KMPTTFLYGAHDWMDYHAAM-----SAVKGMKVPTRIARVADSGHHLYL 425          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A835XLN9_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XLN9_9CHLO)

HSP 1 Score: 162 bits (409), Expect = 2.140e-44
Identity = 95/214 (44.39%), Postives = 131/214 (61.21%), Query Frame = 1
Query:    7 WRKANGLN--KMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAIIDQRPFAQRNFL-KFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRF----RGDFDREAMG--NYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEA--SDSSGTGPK-ISLAIVPNSGHQLFL 612
            WR+A GL+  KMIL GHSLGGYL   YA +YP  +  LVLV P G P+ PED+   I    ++ R  L K   WGW+KGITPG ++R LGP G K++  Y +KRF     G  +RE  G  +Y Y  +AA  GSGE AL  LL PGAWA+SPL+ RL  +   +PV FI+G+HDWM    A +L +    + +   P  +++ ++ ++GH +F+
Sbjct:  134 WRQAAGLDGTKMILVGHSLGGYLAANYALRYPGHVAHLVLVCPAGVPKAPEDWERSITGDKWSWRGQLFKTFMWGWEKGITPGSIIRGLGPWGQKLVYGYVSKRFSHHGEGLSEREIEGFKDYFYQIAAAP-GSGEYALRHLLAPGAWAYSPLEERLHEL--KVPVTFIYGKHDWMRPEHAVKLCQRLRQERAPRCPSDLAVELIEDAGHFVFM 344          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A7S4PE48_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PE48_9EUKA)

HSP 1 Score: 159 bits (401), Expect = 3.180e-44
Identity = 89/204 (43.63%), Postives = 126/204 (61.76%), Query Frame = 1
Query:   10 RKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEP-EDFNAIIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRFR--GDFDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEASDSSGTGPKISLAIVPNSGHQLFL 612
            RK  GL+  +L GHSLGGY    YA +YP+R+  L+L SPVG PE P ED  + +   P+    F    R  WK  I+P   VRT GPLG +++  + TKRFR  G+  R+ + +YLYH SAA+  SGE +L ++L PG +AH PL HRLP++ PS+P+HFI+G+HDWMD  +   +  A +         +  V +SGHQ+++
Sbjct:   96 RKQLGLDSFVLLGHSLGGYFSSLYALRYPERVSSLILASPVGMPERPAEDTPSRLP--PWVVSTF----RQVWKMNISPQSFVRTAGPLGPRLVNWFCTKRFRFEGEEARQ-VSSYLYHTSAASP-SGEYSLFDVLGPGVFAHRPLIHRLPSLCPSVPLHFIYGKHDWMDFRSGLHVTTAREGK-------VYRVSDSGHQMYI 284          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A835SFI9_CHLIN (AB hydrolase-1 domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SFI9_CHLIN)

HSP 1 Score: 162 bits (409), Expect = 5.230e-44
Identity = 95/215 (44.19%), Postives = 130/215 (60.47%), Query Frame = 1
Query:    7 WRKANGL--NKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNA--IIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRF----RGDFDREA--MGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKE---ASDSSGTGPKISLAIVPNSGHQLFL 612
            WR+A GL  +KMIL GHSLGGYL   YA +YP+ ++ LVLV P G P+ PED+    + D+  +  + F  F++ GW+ GITPG ++R LGP G  ++  Y + RF     G  +RE      Y YH +AA  GSGE AL  LL PGAWAHSPL+ RL ++   +PV FI+G+HDWM    A  L E   A  +      +S+ I+ ++GH +FL
Sbjct:  148 WRRAAGLEGSKMILVGHSLGGYLAATYALRYPEHVQHLVLVCPAGVPKAPEDWERQWLGDKWTWRGQLFKVFMK-GWESGITPGSIIRGLGPWGQSLVYKYVSNRFSHHGEGLSEREVAVFKQYFYHIAAAP-GSGEFALRHLLAPGAWAHSPLEERLHDLQ--VPVTFIYGKHDWMRPEHAVRLCEQLRAERAPRAAHDLSVEIIDDAGHFVFL 358          
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Match: A0A8J4BYU7_9CHLO (AB hydrolase-1 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BYU7_9CHLO)

HSP 1 Score: 162 bits (410), Expect = 9.640e-44
Identity = 94/214 (43.93%), Postives = 126/214 (58.88%), Query Frame = 1
Query:    7 WRKANGL--NKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEPEDFNAI-IDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYATKRF----RGDFDRE--AMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRLPNVDPSIPVHFIFGEHDWMDSPAARELKEA--SDSSGTGPK-ISLAIVPNSGHQLFL 612
            WR+A GL  +KMIL GHSLGGYL   YA +YP+ ++ LVLV P G P+ PED+    +  +   +    K   WGW+KG TPG ++R LGP G  ++  Y   RF     G   RE  A   Y Y + AA  GSGE AL  LL PGAWAH+PL+ RL  +   +PV FI+G+HDWM    A  L E   ++ S + P  +S+ I+ ++GH +FL
Sbjct:  220 WRRAAGLERSKMILVGHSLGGYLAANYALRYPEHVQHLVLVCPAGVPKAPEDWERRWLGDKWSVRGQMFKVFMWGWEKGFTPGGLIRALGPWGQNLVYKYVANRFSHHGEGLSQREIDAFKEYFY-SIAALPGSGEYALRHLLAPGAWAHAPLEERLHEL--RVPVTFIYGKHDWMRPEYAVRLCERLRAERSPSAPNDLSVEIIEDAGHFVFL 430          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46308.11721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP8_ECTSI8.300e-10267.48AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A835ZEV4_9STRA7.770e-7251.94Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7S4DX92_9EUKA2.220e-5045.41Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A250WWB7_9CHLO2.360e-4946.01AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
A0A7R9V5E0_9CHLO1.070e-4542.65Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A0L0HQ88_SPIPD1.040e-4444.66AB hydrolase-1 domain-containing protein n=2 Tax=S... [more]
A0A835XLN9_9CHLO2.140e-4444.39AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A7S4PE48_9EUKA3.180e-4443.63Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A835SFI9_CHLIN5.230e-4444.19AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
A0A8J4BYU7_9CHLO9.640e-4443.93AB hydrolase-1 domain-containing protein n=2 Tax=V... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46308contigH-elongata_contig46308:1304..3939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.5
Seed ortholog evalue6e-82
Seed eggNOG ortholog2880.D8LGP8
KEGG rclassRC00037,RC00039,RC00094
KEGG koko:K13535,ko:K13699
KEGG ReactionR09038,R09381
KEGG Pathwayko00564,ko04923,map00564,map04923
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0596@1,KOG4409@2759
EC2.3.1.51
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01004
Hectar predicted targeting categoryother localisation
Exons5
Model size612
Cds size612
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46308.11721.1prot_H-elongata_contig46308.11721.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46308 1304..3939 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930767.4858577-CDS-H-elongata_contig46308:1303..13991622930767.4858577-CDS-H-elongata_contig46308:1303..1399Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 1304..1399 -
1691679561.13191-CDS-H-elongata_contig46308:1303..13991691679561.13191-CDS-H-elongata_contig46308:1303..1399Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 1304..1399 -
1622930767.500947-CDS-H-elongata_contig46308:1844..20311622930767.500947-CDS-H-elongata_contig46308:1844..2031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 1845..2031 -
1691679561.14298-CDS-H-elongata_contig46308:1844..20311691679561.14298-CDS-H-elongata_contig46308:1844..2031Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 1845..2031 -
1622930767.5123994-CDS-H-elongata_contig46308:2261..23581622930767.5123994-CDS-H-elongata_contig46308:2261..2358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 2262..2358 -
1691679561.153043-CDS-H-elongata_contig46308:2261..23581691679561.153043-CDS-H-elongata_contig46308:2261..2358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 2262..2358 -
1622930767.5241382-CDS-H-elongata_contig46308:2995..30981622930767.5241382-CDS-H-elongata_contig46308:2995..3098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 2996..3098 -
1691679561.1626294-CDS-H-elongata_contig46308:2995..30981691679561.1626294-CDS-H-elongata_contig46308:2995..3098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 2996..3098 -
1622930767.5349522-CDS-H-elongata_contig46308:3810..39391622930767.5349522-CDS-H-elongata_contig46308:3810..3939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 3811..3939 -
1691679561.1750112-CDS-H-elongata_contig46308:3810..39391691679561.1750112-CDS-H-elongata_contig46308:3810..3939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46308 3811..3939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46308.11721.1

>prot_H-elongata_contig46308.11721.1 ID=prot_H-elongata_contig46308.11721.1|Name=mRNA_H-elongata_contig46308.11721.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp
QRWRKANGLNKMILCGHSLGGYLGVAYAEKYPQRLEKLVLVSPVGFPEEP
EDFNAIIDQRPFAQRNFLKFLRWGWKKGITPGDVVRTLGPLGYKMMMTYA
TKRFRGDFDREAMGNYLYHNSAATDGSGERALGELLKPGAWAHSPLQHRL
PNVDPSIPVHFIFGEHDWMDSPAARELKEASDSSGTGPKISLAIVPNSGH
QLFL
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mRNA from alignment at H-elongata_contig46308:1304..3939-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46308.11721.1 ID=mRNA_H-elongata_contig46308.11721.1|Name=mRNA_H-elongata_contig46308.11721.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2636bp|location=Sequence derived from alignment at H-elongata_contig46308:1304..3939- (Himanthalia elongata Himel1 dioecious)
CAAAGGTGGCGCAAGGCCAACGGGTTGAACAAGATGATCCTTTGCGGGCA TTCGCTGGGAGGCTATCTTGGTGTCGCGTACGCCGAGAAGTACCCGCAGC GGCTCGAGAAGCTGGTGCTCGTCAGTCCGGTGAGATAGAAATATAACGTC AAAGAAATTAACTAGACGTTATATAACGTCAGTCCGGCGAGAAAAGGCTG TAAGAGGAGAGAGCGTGGGAAAAAAAACCGACAGGCGTGGTGGCAAGAGA TGCAAAACGTACCAAAACAAAATCGAAATGGAGACACAGAAAAGGCTGGC GAGGGCGACTCCTCAGGGTGGGCGGCGCATACCGACGTGGCGTTGCTGCA ATATACGAAAGTCCTTGCCACCCCTGCCCGCTAATCAAAATCGCGGTTTC CACGTTGTCTTGATTTTGTATTTCCTTCCCCCGTTGTGGCAACTATGAAT AGTGACGGAATGACCTCGCAGGATTGTATAGTACCGTACGCGCGAATGCG CCCCCGACCCCCCCCCCCTCCACACACACACACACACCACACCCTCCTCT TGCATGAAGATGGTTTTGATGCCATGTTTCTTGGCGTTGTGTCTATCTTC TTTCAAGGTTTACCTTCGCTCCCCCTCACCCCTCACCCCTACAGACCTTC CCCCCTCGTATCCCAGACAATATTATCCCCTGCCCCGCTTCTTTCAACGT TTTTTGTATTGGATTTCGATCTACGGCTGTATCGGGTTGGGGGGGGGGGG GGGGGGTTAAAAAAAAGGGGGGATTCCCGGGGGGGGGGGGAGATTATAAA ACAAAAAATAAAAAAAACACCNNNNNNNNNNTACAAAAAAGGTTGGATTC CCGGAGGAGCCGGAGGATTTTAATGCAATAATTGACCAAAGGCCCTTCGC TCAGAGAAATTTCTTGAAGTTTCTTCGTTGGGGCTGGAAGAAAGGTGAGC GGAGAAAAAGTGTGGCCATGCGTCTCGGTTTGGCGCTTGGCTTCGCAACT CCTCCTGTCCGCTCGTTTCGTGGTGACGGCCGCCAATGCGAGGATGTTGC CTAGCGCCTCGCTCGCTCGATCCCTCCGCAGTCGTGAAGACTTGCGTCCA GCGCCAGGTTTGCTGGCATAAGGATGATATGGGGGGAGGGGGAGGGGGGT AATCAAGTCTTAAATACTTTACCTGTGAGACCATTGGCCACGTGTCCTCG GGGAGAGGGCGCGTAAAGTATGTATAGGCAGCAGAAAACGACGCCGGGGC GTGGGGTGTTTTGCCTTTGGGGTTCTCGCTTTCAGAGACACACACACCCT CTTATCGGTTATATCTTCTCTTCGACTCCGTATTTTTTTCCGAACCAATA GCCTCAATAATAGGTGGGTATCCCTTTCCCACCGCCTTACGCACACTTTA AGACATCAGTCGCAAGGCCTCGTTTGGAACCCCAGAGGTTGTTAAAAGAA TATCGTCTCTATTCCTTGATATCGACCTTGAAAGATCGTACTGCAAAATA AATTGCTTGTGTGCGTAATGGGGGGTCTCACTACACGGCGGAATGGGGCG ACCGACCAACCAACCGCATAACATCATGCAGGGATAACCCCCGGCGACGT CGTGCGCACCCTCGGGCCGTTGGGATACAAGATGATGATGACCTACGCAA CCAAGCGCTTCCGTGGGGACTTTGATAGGTGAAGTAAAAGCGACGAACGG GGGGAGGAGAGAGAGACAGGGGGCGGAGGGGGGATCGTTACGCTGTCGCG TAACCGGGAGAATCGATCATCATGTTAGCCGTTACGAGCATCATTTTTTT TCTAGTGTCAGTTCTGGTTGCTTGAGTCAGTCGTCGATCCTTAGGTGAGC GCCCTTCGTGCGCTATGTTTCTCCATCCTACCTATCTATCTCGCTCTTTG GCTCTTAGGGAAGCAATGGGAAACTACCTCTATCACAACTCGGCTGCCAC GGACGGCAGCGGAGAGCGCGCGCTGGGAGAACTTCTGAAGCCAGGGGCGT GGGCGCACTCCCCTCTGCAGCACCGCCTCCCTAATGTAGACCCTTCAATT CCGGTACACTTCATCTTCGGCGAGCACGACTGGATGGATTCCCCCGTGAG CACACCACCGGATTCGACGATCCATTCGGGACATGAGAGTTGGGGTGTAA AGCAGAGGAGGGTAATATTGTTTTGGGTTTTGAGTGTGTGCGACCTTGAG CGTGTCGTGTGCCCATTCGCTCATGCTGCCCCCCCCTGTGGATCCTCCGT TGAGCTCGCATCTCCTCTACTCCTGTTGATTTCGCCTATATTTTATGTAT GTCGCCTCTCTCTGTCTCTCTCCTCCTCCCCCCTTCCATTTCTAGGAATG TTATAGAAAATTTCCGTCATTTTGCCGTTCTCGGCCTTCAGCATTGCCTC CACCCCACTGGCGGTTTCTCCACATGGCGGTGTTCACATGGCGGTGTCCA CATGGCGGTGTGTTTTATCTTACATATATTCCTGATACCACATCTCACAT ATATTTCTTGTACGTTGTTTCAAACCACTTCTTCGCTCAGGCCGCTCGGG AGTTGAAGGAGGCCTCGGACTCCAGCGGAACTGGCCCAAAAATAAGCCTT GCTATCGTACCAAATTCGGGGCACCAGCTGTTTCTT
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Coding sequence (CDS) from alignment at H-elongata_contig46308:1304..3939-

>mRNA_H-elongata_contig46308.11721.1 ID=mRNA_H-elongata_contig46308.11721.1|Name=mRNA_H-elongata_contig46308.11721.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1224bp|location=Sequence derived from alignment at H-elongata_contig46308:1304..3939- (Himanthalia elongata Himel1 dioecious)
CAAAGGTGGCGCAAGGCCAACGGGTTGAACAAGATGATCCTTTGCGGGCA
TTCGCTGGGAGGCTATCTTGGTGTCGCGTACGCCGAGAAGTACCCGCAGC
GGCTCGAGAAGCTGGTGCTCGTCAGTCCGCAAAGGTGGCGCAAGGCCAAC
GGGTTGAACAAGATGATCCTTTGCGGGCATTCGCTGGGAGGCTATCTTGG
TGTCGCGTACGCCGAGAAGTACCCGCAGCGGCTCGAGAAGCTGGTGCTCG
TCAGTCCGGTTGGATTCCCGGAGGAGCCGGAGGATTTTAATGCAATAATT
GACCAAAGGCCCTTCGCTCAGAGAAATTTCTTGAAGTTTCTTCGTTGGGG
CTGGAAGAAAGGTTGGATTCCCGGAGGAGCCGGAGGATTTTAATGCAATA
ATTGACCAAAGGCCCTTCGCTCAGAGAAATTTCTTGAAGTTTCTTCGTTG
GGGCTGGAAGAAAGGGATAACCCCCGGCGACGTCGTGCGCACCCTCGGGC
CGTTGGGATACAAGATGATGATGACCTACGCAACCAAGCGCTTCCGTGGG
GACTTTGATAGGGATAACCCCCGGCGACGTCGTGCGCACCCTCGGGCCGT
TGGGATACAAGATGATGATGACCTACGCAACCAAGCGCTTCCGTGGGGAC
TTTGATAGGGAAGCAATGGGAAACTACCTCTATCACAACTCGGCTGCCAC
GGACGGCAGCGGAGAGCGCGCGCTGGGAGAACTTCTGAAGCCAGGGGCGT
GGGCGCACTCCCCTCTGCAGCACCGCCTCCCTAATGTAGACCCTTCAATT
CCGGTACACTTCATCTTCGGCGAGCACGACTGGATGGATTCCCCCGGAAG
CAATGGGAAACTACCTCTATCACAACTCGGCTGCCACGGACGGCAGCGGA
GAGCGCGCGCTGGGAGAACTTCTGAAGCCAGGGGCGTGGGCGCACTCCCC
TCTGCAGCACCGCCTCCCTAATGTAGACCCTTCAATTCCGGTACACTTCA
TCTTCGGCGAGCACGACTGGATGGATTCCCCCGCCGCTCGGGAGTTGAAG
GAGGCCTCGGACTCCAGCGGAACTGGCCCAAAAATAAGCCTTGCTATCGT
ACCAAATTCGGGGCACCAGCTGTTTCTTGCCGCTCGGGAGTTGAAGGAGG
CCTCGGACTCCAGCGGAACTGGCCCAAAAATAAGCCTTGCTATCGTACCA
AATTCGGGGCACCAGCTGTTTCTT
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