mRNA_H-elongata_contig207482.5957.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: D8LIL3_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL3_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.090e-21 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 1
Query: 7 QLDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAADEERAR 168
+LDVEL+VAMELFQAADQFGVDRLKRMCES MLASIEVENAASIFHAADE A+
Sbjct: 408 ELDVELEVAMELFQAADQFGVDRLKRMCESTMLASIEVENAASIFHAADERNAK 461
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A7S3JNQ4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNQ4_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.250e-15 Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 1
Query: 16 VELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAADEERAR 168
++LD+AM+LFQAAD+FGVDRLK++CES MLASI VENA SIFHAAD A+
Sbjct: 455 IDLDIAMDLFQAADRFGVDRLKKICESKMLASINVENACSIFHAADRYMAK 505
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A7S2C711_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C711_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.360e-15 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 1
Query: 7 QLDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAADEERAR 168
Q++V LD+AMELFQ AD FGV+RLK++CE MLASI V+NAASIFHAAD A+
Sbjct: 126 QVNVPLDIAMELFQTADHFGVERLKKICEYKMLASINVDNAASIFHAADLHNAK 179
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A2P4X727_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X727_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.650e-14 Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 10 LDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAAD 153
LDV +D AMELF AD++GV+RLKR+CES ML S+ VENAASIFHAAD
Sbjct: 31 LDVAVDFAMELFVTADRYGVERLKRICESKMLGSLCVENAASIFHAAD 78
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A3F2S3I9_9STRA (BTB domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3I9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.180e-13 Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 1
Query: 10 LDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAAD 153
LDV +DVAMELF AD++GV+RLKR+CES ML+S+ ++NAASIFHAAD
Sbjct: 286 LDVAVDVAMELFVTADRYGVERLKRICESKMLSSLCIDNAASIFHAAD 333
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: F0Y4D1_AURAN (BTB domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D1_AURAN) HSP 1 Score: 71.6 bits (174), Expect = 3.390e-13 Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 1
Query: 10 LDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAAS 135
+D+ LD+AMELFQAADQFGV+RLKRMCES MLASI VENAA+
Sbjct: 386 VDIALDIAMELFQAADQFGVERLKRMCESKMLASIHVENAAT 427
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A7S2BYV7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BYV7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.420e-13 Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1
Query: 7 QLDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASI 138
Q ++ LD+AMELFQAADQFGV+RLK++CES MLASI VENAA+I
Sbjct: 153 QCEIPLDIAMELFQAADQFGVERLKKICESKMLASINVENAATI 196
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A7S2SJA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJA3_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 6.390e-13 Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 1
Query: 7 QLDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAAD 153
Q+D+ ++ AMELFQAAD+FGV+RLKRMCE+ ML+SI ++NAASI AAD
Sbjct: 447 QIDIRVEEAMELFQAADRFGVERLKRMCENAMLSSINIDNAASILLAAD 495
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: A0A7S1XUX3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUX3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.850e-13 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 10 LDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAADEERARG 171
+DV LD M+L QAAD+FGVDRLK++CE +ML+SI VENAASIF AD A G
Sbjct: 163 VDVSLDELMDLLQAADRFGVDRLKKICEHIMLSSINVENAASIFVVADTHSASG 216
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Match: K3WUC3_GLOUD (BTB domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUC3_GLOUD) HSP 1 Score: 69.3 bits (168), Expect = 2.220e-12 Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 10 LDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAAD 153
LDV +DVAMELF AAD++GVDRLK +CES ML S+ +EN A+I HAAD
Sbjct: 395 LDVSVDVAMELFVAADRYGVDRLKHICESRMLGSLCIENVATILHAAD 442 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig207482.5957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig207482.5957.1 >prot_H-elongata_contig207482.5957.1 ID=prot_H-elongata_contig207482.5957.1|Name=mRNA_H-elongata_contig207482.5957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp MTQLDVELDVAMELFQAADQFGVDRLKRMCESMMLASIEVENAASIFHAAback to top mRNA from alignment at H-elongata_contig207482:592..762- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig207482.5957.1 ID=mRNA_H-elongata_contig207482.5957.1|Name=mRNA_H-elongata_contig207482.5957.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=171bp|location=Sequence derived from alignment at H-elongata_contig207482:592..762- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig207482:592..762- >mRNA_H-elongata_contig207482.5957.1 ID=mRNA_H-elongata_contig207482.5957.1|Name=mRNA_H-elongata_contig207482.5957.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=342bp|location=Sequence derived from alignment at H-elongata_contig207482:592..762- (Himanthalia elongata Himel1 dioecious)back to top |