mRNA_H-elongata_contig20739.5954.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: D7G421_ECTSI (Acyl-CoA thioesterase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G421_ECTSI) HSP 1 Score: 596 bits (1537), Expect = 3.530e-207 Identity = 326/480 (67.92%), Postives = 367/480 (76.46%), Query Frame = 2
Query: 2 RSPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFPLLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAK--DENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQ--EYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPTPQACVEVLASVVRPQTVESKVSNRFTLTFSFPELLEGSNDQTRP-----------LLRTVLPADATEASRIVMAKHRSRLPEEANE 1396
+SPIT ALWEIR+AE+EFQEK+R A E L V PSLSRSAIHYPFSTD FLRE YRNP GLVRIGRILEDLDALAGNIA KHCS+DPSFPLLVTASVDR IVL+RHP+LD DITLMGRVVWTGRSSMVINMR C++S PGVCYVG+DP A D++CWLDANFTFVARDRETGRSR VSPLDL G PL + + SDG E R+P+ W+A+WR V ++K RQALER AAKK + +E EA RL++E EA LVAAGF LL LPALA+PHAVL+ QT SSTLICMPQHRNTANRIFGGFLMHRAYEV FCAAF FGGSRP FSEIDEV+FLQPVD+GDLV ++AC+LYTK+G+ A +PQACVEVLASVVRP+TV+SKVSNRF LTFSFPEL G + RP LLRTVLPA+ATEASRIV AKHR RL + A++
Sbjct: 84 KSPITQALWEIRRAEMEFQEKRREAGGRPPRENLRPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLVRIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDR----------IVLRRHPELDCDITLMGRVVWTGRSSMVINMR---------------CSTSAPGVCYVGDDPWADGDDDSCWLDANFTFVARDRETGRSRAVSPLDL-GTDPLQDEPGDGSDGSPGE-RDPEHGWRALWRVVHSHKSRQALERNAAKKGAAAEGFLE--VEAARLKREQEASTLVAAGFPLLHLPALANPHAVLMSQTLTSSTLICMPQHRNTANRIFGGFLMHRAYEVAFCAAFTFGGSRPRFSEIDEVVFLQPVDVGDLVKMDACILYTKEGKEAGSSPQACVEVLASVVRPETVDSKVSNRFNLTFSFPELASGVEEGNRPCADGFSQSPAALLRTVLPANATEASRIVAAKHRDRLQDAADD 534
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: A0A835Z9W3_9STRA (Putative acyl-CoA thioesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W3_9STRA) HSP 1 Score: 301 bits (772), Expect = 3.710e-93 Identity = 191/477 (40.04%), Postives = 256/477 (53.67%), Query Frame = 2
Query: 2 RSPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPS------FPLLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERK----AAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPTPQACVEVLASVVRPQTVESKVSNRFTLTFSFPELLEGSNDQTRPLLRTVLPADATEASRIVMAKHRSRLPEEANEEA 1402
+SP+T A W++R + + QE + A + P PA S SR +I Y FS + LR Y NP G +RI R+LEDLDALA IA +HC+ + S +P+LVTASVDR I +K+ P L+ D+ L G +VWTGRSSM I M A T DA ++ A + WL+A FTFVAR R+TGRS P+ PL +E P+E +R Q DR+ L R A ++ T P+ + E A L+ G L +P LADP +VLV TA SS ++CMPQ RNTANRIFGGFLM RA E+GF A+ G+ P + +DEV+F QPVD+GD++ L++CVL T+ G +P+A VEVLA V+RP +SNRF TF FPEL + + + L+ VLP+D EA R+V R L E ++
Sbjct: 17 KSPLTEAFWDLRSVDKQLQEVEELAAKQRHAHPRPA---SASRKSITYDFSRNSMLRSAYANPWGFIRISRVLEDLDALAATIAMEHCATECSAHGVTFWPMLVTASVDR----------IEMKQQPMLERDLVLSGHIVWTGRSSMQILMHCAVAQDSTPAAEDAAATAA------------AAAPSPWLEARFTFVARSRDTGRSTPIPPLLIE-------------------TPKED--EAFRHAQRAMDRKKLLRSGGGGATLAGANGTAPV------SSPEAEAAAAALLREGRLLKAMPCLADPRSVLVGDTAQSSVIVCMPQERNTANRIFGGFLMGRALELGFATAYTTVGAVPFTAVVDEVVFHQPVDVGDILKLDSCVLQTRAGGALGRSPRASVEVLAHVLRPDKRTMHLSNRFDFTFKFPELARRDDGEPQRELQRVLPSDVDEAQRVVQVMQRQALHREEQADS 441
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: W7TVW1_9STRA (Thioesterase superfamily n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVW1_9STRA) HSP 1 Score: 251 bits (642), Expect = 2.430e-74 Identity = 167/451 (37.03%), Postives = 235/451 (52.11%), Query Frame = 2
Query: 2 RSPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFPLLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPTPQACVEVLASVVRPQTVESKVSNRFTLTFSFPELLEGSNDQTRPLLRTVLPADATEASRIV 1354
+SPI LW R E + R + TEP+ PS S++++ Y F+ +PFL + Y NP G R G++LED+DALAGN+A KHC KD PLLVTASVDR I L +P+LD D+ + GRVVWTG SSM I++ E+H P AK W+ A+FTFVAR +T ++ ++ L K E +E++ A+ ++ Q RK +KA T ++ + ET + L++ L+ +P LADP VLV T S++ I PQ RN NR+FGGFLM RAYE+ + ++F GSRP F ++ V F PVD+GDL+ +A VLYT G+ +P V+V+AS+ RP+TV S +SN F F P RP +R VLPA+ +A R++
Sbjct: 51 KSPIITHLWSQRATGKELEIDVR-----SPTEPVERT-PSESQTSVTYEFTREPFLSQSYENPWGFFRKGKLLEDMDALAGNVAFKHCEKDGKVPLLVTASVDR----------IRLSSNPKLDRDMEMTGRVVWTGSSSMQIDL----------EVHAL---------------PDAKP---WISASFTFVARHPQTAKATAINKL-----------------KPESAAERETFSAVEQKNQR--------RKTVRKAKGTEGSPS--LKSGAVDVETMIKLLLSQARPLMEMPCLADPTCVLVDNTRASNSSIMQPQQRNMLNRVFGGFLMRRAYEIAYSTCYLFAGSRPEFFQVAHVDFTSPVDVGDLMRFDAAVLYTHTGQQTG-SPHVHVQVVASICRPETVHSTISNTFNFVFRVPG---------RPTVRKVLPANLDQAKRMI 420
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: A0A058ZXG6_EUCGR (Uncharacterized protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A058ZXG6_EUCGR) HSP 1 Score: 252 bits (643), Expect = 4.040e-74 Identity = 179/460 (38.91%), Postives = 241/460 (52.39%), Query Frame = 2
Query: 5 SPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQ-----PSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFP---LLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPT-PQACVEVLASVVRPQTVESKVSNRFTLTFSF-PELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALWE R E + GA P PA + P+ SR++I Y FS+D LRE YRNP +R+G+++EDLDALAG I KHCS D LLVTASVDR +VLKR +D+D+ + G V W GRSSM I + + T+E D+ ++ L ANFTFVARD TG+S PV+P+ SP +E + E RN K R ++NKD ++ + + L+A G +PALAD ++L+R T ++LIC PQ RN RIFGGFLM RA+E+ F + + F G P F E+D V FL+PVD+G+ + L+ CVLYT E NP P VEV+A V+RP+ S+VSN+F TF+ PE L ND R +R V+P+ EA R++
Sbjct: 67 SPVTNALWEARSKMFE---EVGGAGASGKAAPPPASELVPRSPARSRTSIFYKFSSDYVLREQYRNPWNKIRMGKLVEDLDALAGTICYKHCSSDDGTTRPLLLVTASVDR----------MVLKRPIHIDTDLQIEGAVTWVGRSSMEIQLEVTQS---TEETQDS-------------------SDSVALTANFTFVARDSRTGKSAPVNPI-----SPETERERLLWEEAENRNKMRKKK----REESNKD-------------------------GKVEDSSRLQALLAEGRVFCDMPALADRDSILIRDTCFENSLICQPQQRNIHGRIFGGFLMRRAFELAFSSTYAFAGVAPRFVEVDHVDFLRPVDVGNFLRLKCCVLYT---ELDNPDEPLINVEVVAHVMRPELRSSEVSNKFYFTFTVRPEAL---NDGLR--IRKVVPSTEEEARRVL 449
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: UPI0005403031 (acyl-coenzyme A thioesterase 9, mitochondrial n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005403031) HSP 1 Score: 250 bits (638), Expect = 4.360e-73 Identity = 171/460 (37.17%), Postives = 241/460 (52.39%), Query Frame = 2
Query: 5 SPITNALWEIR-----KAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFP---LLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPT-PQACVEVLASVVRPQTVESKVSNRFTLTFSF-PELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALWE R K EIE + K + + L + PS SR+++ Y FS+D LRE YRNP +R+G+++EDLDALAG I+ KHCSK LLVTASVD+ I+LK+ Q+D+D+TL+G V W GRSSM + + V +D K + L ANFTFVARD ETG+S P++ + SP QE K +W + + + ++R K D I +L+A G + LPALAD ++L+R T + S++IC PQ RN RIFGGFLM +A+E+ F A+ F G+ P F E+D V F++PVD+G+ + +++ VLYT E NP P VEV+A V RP+ S++SN+F TF+ PE + +R+V PA EA R++
Sbjct: 97 SPVTNALWEARSKFFEKGEIEVENDK------ISQDGLVSKTPSQSRTSVEYKFSSDFVLREQYRNPWNRIRMGKLVEDLDALAGTISYKHCSKSIGITRPILLVTASVDK----------ILLKKPIQVDADLTLVGAVTWVGRSSMEMQLE----------------------VLQPSQDASQKSDPLALVANFTFVARDAETGQSAPINRI-----SPETEQE----------------KLLWEQAEARNKMRKVKRGEQKNKIDNQDII-------------RINELLAEGRVFVDLPALADRDSILIRDTCLQSSIICQPQQRNIHGRIFGGFLMRKAFELAFSTAYTFAGASPRFVEVDHVDFVKPVDVGNFLRMKSSVLYT---EVQNPDRPLINVEVVAHVTRPELRTSEISNKFYFTFTVCPEATKNGLK-----IRSVYPASEEEARRVI 476
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: A0A6P3Z052_ZIZJJ (acyl-coenzyme A thioesterase 9, mitochondrial-like n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3Z052_ZIZJJ) HSP 1 Score: 251 bits (640), Expect = 4.760e-73 Identity = 179/455 (39.34%), Postives = 243/455 (53.41%), Query Frame = 2
Query: 5 SPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFP---LLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEK-LVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPT-PQACVEVLASVVRPQTVESKVSNRFTLTFSFPELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALWE R E K G + T L PS SR++I Y FS+D LRE YRNP +R G++LEDLDALAG IA KHC + LLVTASVD+ +VLK+ +D+D++++G V W GRSSM I + + H E P + D + L ANFTFVARD TG+S V+ + SP G+E K +W+ +D++ +++A KK + IE K T+ K L+A G +PALAD ++L++ T + ++ IC PQ RN RIFGGFLM RA+E+ F A+ F G P F E+D V FL+PVD+G+ + L++C+LYT E NPT P VEV+A V RP+ S+VSN+F TFS P E D R +R V+PA EA R++
Sbjct: 135 SPVTNALWEARSNIFE----KLGP--SSPTSQLDFKTPSQSRTSILYRFSSDYTLREQYRNPWNGIRTGKLLEDLDALAGTIAFKHCCNEDGTTRSLLLVTASVDK----------MVLKKPISVDADLSIVGAVTWVGRSSMEIQLEVIQPTH---------------------ESPESSDSHA-LIANFTFVARDSRTGKSALVNQI-----SPETGKE----------------KMLWKEAD-ERDKKRKQKRAEKK-----VDIE--------NKHTDRLKALLADGRIFCNMPALADRDSILIKDTCLKNSFICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFAGVAPHFLEVDHVDFLKPVDVGNFLCLKSCILYT---EPDNPTDPLINVEVIAHVTRPELRSSEVSNKFYFTFSIPP--EAVKDGLR--VRKVVPATEEEAKRVL 509
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: A0A6D2JD65_9BRAS (Uncharacterized protein n=7 Tax=Brassicaceae TaxID=3700 RepID=A0A6D2JD65_9BRAS) HSP 1 Score: 247 bits (630), Expect = 3.880e-72 Identity = 165/454 (36.34%), Postives = 244/454 (53.74%), Query Frame = 2
Query: 5 SPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSK---DPSFPLLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPTPQACVEVLASVVRPQTVESKVSNRFTLTFSF-PELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALWE R+ E +D+ + L A PS SR++I Y FS+D LRE YRNP +R G+++EDLDALAG I+ KHCS + +LVTASVDR I++KR ++D+D++++G V W GRSSM + + ++ A+ A++P E+ L ANFTFVARD +TG+S P++P+ E +HE K +WR + + +R +K+ E +L+ +L+A G L +PALAD ++L++ T+ ++LIC PQ RN RIFGGFLM +A+E+ F A+ F G P F E+D V F++PVD+G+ + ++ VLYT+ A P +EV+A V P+ S+VSNRF TFS PE ++ +R V+PA EA R++
Sbjct: 79 SPVTNALWEARRNMFE----NPTGDDDSQSGGLAAKSPSRSRTSILYKFSSDFVLREQYRNPWNEIRTGKLVEDLDALAGTISFKHCSSGNGNARAMILVTASVDR----------IIMKRPIRVDADLSIVGAVTWVGRSSMEMQL----------QVIQAQDANNP-------------SESVALKANFTFVARDAKTGKSTPINPVTPE-------------SEHE--------KLLWREAEERNKLRKQKRAESKE------------EHEKLKDLERLNELLAEGRVFLDMPALADRDSILIKDTSHENSLICQPQQRNVHGRIFGGFLMRKAFELAFSNAYTFAGVSPRFLEVDRVDFIKPVDVGNFLRFKSRVLYTEATSSAEPLIN--IEVVAHVTSPELRSSEVSNRFYFTFSVRPEAMKDGLK-----IRNVVPATEEEARRVI 455
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: A0A6P6WRG3_COFAR (acyl-coenzyme A thioesterase 9, mitochondrial-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6WRG3_COFAR) HSP 1 Score: 250 bits (638), Expect = 6.920e-72 Identity = 171/455 (37.58%), Postives = 242/455 (53.19%), Query Frame = 2
Query: 5 SPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFP---LLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPT-PQACVEVLASVVRPQTVESKVSNRFTLTFSF-PELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALWE R + F+ A + + L A PS SR++I Y FSTD LRE YRNP +R+G+++EDLDALAG I+ KHCS S LLVTASVD+ IVL+R ++D+D+T++G V W GRSS+ I + V ++ ++ ++ L ANFTFVARD TG+S PV+ + E E K +W + +R + +K K + I+ E RL + L+A G +PALAD ++L+R T + ++LIC PQ RN RIFGGFLM RA+E+ F A+ F G+ P F E+D V FL+PVD+G+ + ++CVLYT E NP P VEV+A V RP+ S+VSN+F TF+ P+ ++ +R V+PA EA R++
Sbjct: 215 SPVTNALWEARSSI--FERLNNVAADAPSPNELIAKPPSKSRTSIVYKFSTDYILREQYRNPWNEIRMGKLVEDLDALAGTISFKHCSSADSTTMPLLLVTASVDK----------IVLRRPIRVDTDLTIVGAVTWVGRSSLEIQLE----------------------VTQSAQETSSQSDSLALTANFTFVARDSRTGKSAPVNQISPE---------------------TEREKLLWEEAE---ERNQIRKK---KRGEKRQGIDNDEETKRLNE------LLAEGRVFCDMPALADRDSILIRDTYLQNSLICQPQQRNIHGRIFGGFLMRRAFELAFATAYSFAGAAPRFVEVDHVDFLKPVDVGNFLRFKSCVLYT---ELENPDKPMINVEVVAHVTRPEFRSSEVSNKFYFTFTVRPDAIKNGLK-----IRNVVPATEEEAKRVI 594
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: A0A8B8P296_9MYRT (acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 n=4 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8P296_9MYRT) HSP 1 Score: 246 bits (628), Expect = 8.700e-72 Identity = 175/456 (38.38%), Postives = 243/456 (53.29%), Query Frame = 2
Query: 5 SPITNALWEIRKAEIEFQEKKRGAREDNAT--EPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFP---LLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPTPQACVEVLASVVRPQTVESKVSNRFTLTFSF-PELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALWE R ++I + GA E+ A+ L PS SR++I Y FS+D LRE YRNP +R+G+++EDLDALAG I KHCS D LLVTASVDR +VLKR ++D+D+ + G V W GRSSM I + V E+ + ++ L ANFTFVARD TG+S P++ + E E K +W+ + K + ++K ++ DT I + +RL + L+A G LPALAD ++L+R T ++LIC PQ RN RIFGGFLM RA+E+ F + F G P F E+D V FL+PVD+G+ + L+ CVLYT+ A P VEV+A V++P+ S+VSN+F TF+ PE L ND R +R V+P+ EA R++
Sbjct: 79 SPVTNALWEAR-SKIFEEAGDTGASENAASLESELVPRSPSRSRTSIFYKFSSDYVLREQYRNPWNEIRMGKLVEDLDALAGTICYKHCSSDDGTTRPLLLVTASVDR----------MVLKRPIRIDTDLQIAGAVTWVGRSSMEIQLE----------------------VTQSTEETQNSLDSVALTANFTFVARDSRTGKSAPINRISPE---------------------TEREKLLWQEAE--KRNKMRKKKREERNLDTKIE-----DLSRL------QDLLAEGRVFCDLPALADRDSILIRDTCFENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTTYAFAGVAPRFVEVDHVDFLRPVDVGNFLRLKCCVLYTELDNPAEPLIN--VEVVAHVMQPELRSSEVSNKFYFTFTVRPEAL---NDGLR--IRKVVPSTEEEAWRVL 460
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Match: UPI001CB9C7C0 (acyl-coenzyme A thioesterase 2, chloroplastic-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9C7C0) HSP 1 Score: 246 bits (628), Expect = 1.490e-71 Identity = 169/454 (37.22%), Postives = 239/454 (52.64%), Query Frame = 2
Query: 5 SPITNALWEIRKAEIEFQEKKRGAREDNATEPLPAVQPSLSRSAIHYPFSTDPFLREGYRNPSGLVRIGRILEDLDALAGNIAAKHCSKDPSFP---LLVTASVDRQGNSLPPTVQIVLKRHPQLDSDITLMGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKDENCWLDANFTFVARDRETGRSRPVSPLDLEGLSPLIGQEYSDGGKHEGRNPQESWKAIWRRVQTNKDRQALERKAAKKASDTTIPIEQFFEATRLRKETEAEKLVAAGFSLLRLPALADPHAVLVRQTAVSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVLFLQPVDIGDLVHLEACVLYTKQGEGANPT-PQACVEVLASVVRPQTVESKVSNRFTLTFSFPELLEGSNDQTRPLLRTVLPADATEASRIV 1354
SP+TNALW+ R F D+ ++ P+ SR+ I YPFSTD LRE YRNP +R+G++LEDLDALAG I+ KHC LLVTASVD+ +V+K+ +DSD+ ++G V W GRSSM I + + T + D++ + ANFTFVARD +TG+S ++ + +P QE K +WR +A ER A+K ++Q E ++ L+A G +PALAD ++L++ T + ++L+C PQ RNT RIFGGFLM RA+E+GF A+ F GS P F E+D V FL+PVD+G+ + ++CVLYT E NP P VEV+A V RP+ ++VSN+F TFS S+D T +R+V+PA EA R++
Sbjct: 112 SPVTNALWQARS--FIFDNPLSATTADDVSK-----TPTHSRTTILYPFSTDYILREQYRNPWNGIRVGKLLEDLDALAGTISFKHCFNHAGMADSLLLVTASVDK----------MVIKKPILVDSDLKIVGAVTWVGRSSMEIQLEVLQSTKETSDPLDSQA----------------------IIANFTFVARDSKTGKSAVINKI-----TPETEQE----------------KLLWR--------EAEERNKARKNKR----LQQKKEIDNDQESERLNALLAEGRVFSDMPALADRDSILIKDTCLQNSLVCQPQQRNTHGRIFGGFLMRRAFELGFATAYAFAGSAPLFLEVDHVDFLKPVDVGNFLRFKSCVLYT---ELENPEQPLINVEVVAHVTRPELRSAEVSNKFYFTFS-----TSSDDITSGKIRSVVPATEEEARRVI 485 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20739.5954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20739.5954.1 >prot_H-elongata_contig20739.5954.1 ID=prot_H-elongata_contig20739.5954.1|Name=mRNA_H-elongata_contig20739.5954.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=341bp MGRVVWTGRSSMVINMRRARRCHITDELHDARCASSPPGVCYVGEDPRAKback to top mRNA from alignment at H-elongata_contig20739:640..6864+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20739.5954.1 ID=mRNA_H-elongata_contig20739.5954.1|Name=mRNA_H-elongata_contig20739.5954.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6225bp|location=Sequence derived from alignment at H-elongata_contig20739:640..6864+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20739:640..6864+ >mRNA_H-elongata_contig20739.5954.1 ID=mRNA_H-elongata_contig20739.5954.1|Name=mRNA_H-elongata_contig20739.5954.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2046bp|location=Sequence derived from alignment at H-elongata_contig20739:640..6864+ (Himanthalia elongata Himel1 dioecious)back to top |