mRNA_H-elongata_contig20707.5930.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20707.5930.1
Unique NamemRNA_H-elongata_contig20707.5930.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A6H5JGZ5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGZ5_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 5.040e-95
Identity = 148/175 (84.57%), Postives = 163/175 (93.14%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGGPSVADIAKDVR 525
            + VFCELERVLD+ELDFRAEAQAMEKIAAGVA++VDG RA PPIVVPRPVPGL SGRVLVMEYVQGMALNRLAE+L ELG  ETSPEAR+ GKRLL SLTEAFGRMIFGAGFVHGDPHPGNIF+MDGG+VALIDCGQVKQIS+ QKLRLA+L+CKLE+WNKP GP+ A+IAKDV+
Sbjct:  281 YPVFCELERVLDSELDFRAEAQAMEKIAAGVAHSVDGSRARPPIVVPRPVPGLCSGRVLVMEYVQGMALNRLAERLTELGLVETSPEARVFGKRLLTSLTEAFGRMIFGAGFVHGDPHPGNIFIMDGGQVALIDCGQVKQISITQKLRLANLICKLEQWNKPNGPTCAEIAKDVK 455
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A4D9DFQ2_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFQ2_9STRA)

HSP 1 Score: 217 bits (553), Expect = 3.080e-64
Identity = 110/174 (63.22%), Postives = 135/174 (77.59%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGGPSVADIAKDV 522
            ++VF ELER L  ELDF AEAQAMEKIAA VA+T DGR AV P+VVPR + GL S RV+VM+++ G  L RL +++AE G  E SPEA +  +RLL+SLTEAF RM+FG GF+HGDPHPGNIFVM+GG +ALIDCGQVKQI   QKLRLA LV K+ R+ KP GP+  +++K V
Sbjct:  240 YRVFLELERALTNELDFLAEAQAMEKIAAAVAHTPDGRPAVAPLVVPRAINGLVSKRVIVMDFIHGTPLTRLKDRMAERGIPEGSPEAAIFSRRLLSSLTEAFSRMVFGDGFLHGDPHPGNIFVMEGGGIALIDCGQVKQIGNSQKLRLADLVLKVSRYGKPDGPTAIELSKTV 413
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A7S1T6F4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T6F4_9RHOD)

HSP 1 Score: 206 bits (523), Expect = 3.840e-60
Identity = 102/175 (58.29%), Postives = 133/175 (76.00%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGGPSVADIAKDVR 525
            + VFCELER L  ELDF AEAQ++EKIAA VA+  +G  A  P+ VPRPVPGL + RVLVME+V+G+ALN++ EK+ + G +E SPE  L G RLL SL+EAF RMIFG GF+HGDPHPGNIFVM  G +ALIDCGQVKQ++  ++L+LA L+ ++ +W     P+V ++A+ VR
Sbjct:  248 YPVFCELERALTNELDFLAEAQSIEKIAASVAHLPNGTPAKAPLYVPRPVPGLGTKRVLVMEFVEGIALNKIKEKMEDRGLSEESPEVILFGNRLLESLSEAFARMIFGPGFIHGDPHPGNIFVMPNGTIALIDCGQVKQLASSRRLQLAELITRIAQWGTENSPTVDELARMVR 422
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A7S0E0A7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E0A7_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 1.610e-56
Identity = 98/175 (56.00%), Postives = 121/175 (69.14%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGG-PSVADIAKDV 522
            + VFCELER L  ELDF  EAQ+  K+ A V++T DG  A P +VVP PV GL S RVLVM+ + G  LNRLA ++ + G    SPE++L GKR+L  LTEAFGRMI GAGF+HGDPHPGNIFVM+G +VALIDCGQVKQI    +L+LA  +  +  W   GG P +   A+D 
Sbjct:    8 YTVFCELERALKGELDFLQEAQSALKVFASVSHTADGSPADPAVVVPLPVAGLSSRRVLVMDLIPGTPLNRLAGEMEKRGIKPGSPESKLAGKRILTQLTEAFGRMILGAGFIHGDPHPGNIFVMEGARVALIDCGQVKQIPSSYRLKLAEAILLVNEWQDTGGSPELIRRAQDA 182
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A7S3T5W2_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T5W2_EMIHU)

HSP 1 Score: 189 bits (481), Expect = 5.980e-54
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGG-PSVADIAKD 519
            + VFCELER L  ELDF  EAQ+  K+ A V++T  G+ A P + VP PVPGL S RVLVM+++ G  LN++A  L E G    SPE+ L G+R+LA LTEAFGRM+ GAGF+HGDPHPGNIF+M+G +VALIDCGQVKQIS   +L+LA  V  ++ W + GG P +   AK+
Sbjct:  261 YTVFCELERALYGELDFLQEAQSALKVHASVSHTAGGKPAEPAVAVPLPVPGLASRRVLVMDFIPGTPLNKMAAVLEERGIKPGSPESELAGRRILAQLTEAFGRMMLGAGFIHGDPHPGNIFLMEGARVALIDCGQVKQISTDFRLKLAQAVLSVDEWQQTGGSPELVQRAKE 434
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A7S3T615_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T615_EMIHU)

HSP 1 Score: 189 bits (481), Expect = 1.450e-53
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGG-PSVADIAKD 519
            + VFCELER L  ELDF  EAQ+  K+ A V++T  G+ A P + VP PVPGL S RVLVM+++ G  LN++A  L E G    SPE+ L G+R+LA LTEAFGRM+ GAGF+HGDPHPGNIF+M+G +VALIDCGQVKQIS   +L+LA  V  ++ W + GG P +   AK+
Sbjct:  261 YTVFCELERALYGELDFLQEAQSALKVHASVSHTAGGKPAEPAVAVPLPVPGLASRRVLVMDFIPGTPLNKMAAVLEERGIKPGSPESELAGRRILAQLTEAFGRMMLGAGFIHGDPHPGNIFLMEGARVALIDCGQVKQISTDFRLKLAQAVLSVDEWQQTGGSPELVQRAKE 434
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A0M0JG50_9EUKA (Putative aarf domain-containing protein kinase 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JG50_9EUKA)

HSP 1 Score: 186 bits (472), Expect = 4.000e-53
Identity = 95/174 (54.60%), Postives = 124/174 (71.26%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGG-PSVADIAKD 519
            + VFCELER LD ELDF AEAQA  K+ A V++T DG+   P + VP PV GL S RVLVM++V+G  LNRL+ ++ + G    SPE+++ G+R+L  LT AFGRM+ GAGF+HGDPHPGNIFV  G KVALIDCGQVKQIS + +L+LA  +  +  W + GG P +   A++
Sbjct:  192 YTVFCELERALDGELDFLAEAQAALKVYASVSHTADGKPVAPAVGVPLPVQGLASRRVLVMDFVEGTPLNRLSAEMEKRGIKPGSPESQIAGRRILEQLTVAFGRMMLGAGFIHGDPHPGNIFVQPGAKVALIDCGQVKQISTEYRLQLAEAILLVNEWVETGGSPKLIQTAQE 365
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A0G4FD31_VITBC (Protein kinase domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FD31_VITBC)

HSP 1 Score: 186 bits (471), Expect = 4.730e-52
Identity = 91/159 (57.23%), Postives = 118/159 (74.21%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERW 477
            + +F ELE VL  ELDF  EAQAMEK+AA +++T D R A PP++VP P+PGL S RVL+M+Y+ G  L+RL +++ + G    SPEA+   +RLL SLTEAF RMIFG GF+HGDPHPGNIFV+D G+ ALIDCGQVKQ++  Q+ RLA L+  +  W
Sbjct:  262 YTIFKELEAVLLNELDFLCEAQAMEKVAAAISHTPDNRLAPPPLIVPLPLPGLVSKRVLIMDYIDGKPLSRLRDEMNKQGILPGSPEAKFAAQRLLTSLTEAFARMIFGPGFIHGDPHPGNIFVLDNGQTALIDCGQVKQLTFDQQRRLAELIILVSEW 420
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A7S2N3Z5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N3Z5_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 8.250e-52
Identity = 94/174 (54.02%), Postives = 121/174 (69.54%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGG-PSVADIAKD 519
            + VFCELE  L+ ELDF AEAQA  K+ A V++T  G    P + VP PV GL S RVLVME+V+G  LN+LA+ + + G    SPE+++ G R+L  LT AFGRM+ GAGF+HGDPHPGNIFV +G KVALIDCGQVKQI  + +LRLA  +  +  W + GG P + D A++
Sbjct:  198 YTVFCELETALNGELDFLAEAQAAMKVFASVSHTCSGDPTAPAVKVPLPVQGLSSRRVLVMEFVEGTPLNKLADVMEKRGIKPGSPESKIAGVRILEQLTTAFGRMMLGAGFIHGDPHPGNIFVQEGAKVALIDCGQVKQIPQEARLRLAEAILLVNEWQETGGSPRLIDAAQE 371
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BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Match: A0A7S0J6X4_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6X4_9EUKA)

HSP 1 Score: 180 bits (456), Expect = 1.610e-50
Identity = 90/164 (54.88%), Postives = 116/164 (70.73%), Query Frame = 1 
Query:    1 HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPVPGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLTEAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLASLVCKLERWNKPGG 492
            + VFCELER L  ELDF  EAQ+  K+ A V++ VDG    P + VP PV GL S RVLVM++++G  LNRL E++A+ G     PEA++ G+R+LA LTEAFGRMI GAGF+HGDPHPGNIFVM+G +VALIDCGQVKQ+    ++ +A  +  +  W   GG
Sbjct:  247 YTVFCELERALQGELDFLMEAQSAMKVYASVSHKVDGSYTDPAVRVPLPVQGLASRRVLVMDFIKGTPLNRLPEEMAKRGIEPGGPEAKVAGRRILAQLTEAFGRMILGAGFIHGDPHPGNIFVMEGAQVALIDCGQVKQLPSSLRVSIAEALLLVREWQVTGG 410
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20707.5930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGZ5_9PHAE5.040e-9584.57Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A4D9DFQ2_9STRA3.080e-6463.22Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A7S1T6F4_9RHOD3.840e-6058.29Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0E0A7_9EUKA1.610e-5656.00Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S3T5W2_EMIHU5.980e-5455.75Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7S3T615_EMIHU1.450e-5355.75Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A0M0JG50_9EUKA4.000e-5354.60Putative aarf domain-containing protein kinase 1-l... [more]
A0A0G4FD31_VITBC4.730e-5257.23Protein kinase domain-containing protein n=3 Tax=V... [more]
A0A7S2N3Z5_9EUKA8.250e-5254.02Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0J6X4_9EUKA1.610e-5054.88Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20707contigH-elongata_contig20707:2522..6689 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.8
Seed ortholog evalue4.1e-79
Seed eggNOG ortholog2880.D7FSZ9
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-24_004250.1
Exons5
Model size525
Cds size525
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20707.5930.1prot_H-elongata_contig20707.5930.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20707 2522..6689 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930157.0783396-CDS-H-elongata_contig20707:2521..26351622930157.0783396-CDS-H-elongata_contig20707:2521..2635Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 2522..2635 -
1691679302.9577322-CDS-H-elongata_contig20707:2521..26351691679302.9577322-CDS-H-elongata_contig20707:2521..2635Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 2522..2635 -
1622930157.0941582-CDS-H-elongata_contig20707:3409..34631622930157.0941582-CDS-H-elongata_contig20707:3409..3463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 3410..3463 -
1691679302.9667401-CDS-H-elongata_contig20707:3409..34631691679302.9667401-CDS-H-elongata_contig20707:3409..3463Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 3410..3463 -
1622930157.108439-CDS-H-elongata_contig20707:4782..48721622930157.108439-CDS-H-elongata_contig20707:4782..4872Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 4783..4872 -
1691679302.9741437-CDS-H-elongata_contig20707:4782..48721691679302.9741437-CDS-H-elongata_contig20707:4782..4872Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 4783..4872 -
1622930157.1215737-CDS-H-elongata_contig20707:5633..57051622930157.1215737-CDS-H-elongata_contig20707:5633..5705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 5634..5705 -
1691679302.9816487-CDS-H-elongata_contig20707:5633..57051691679302.9816487-CDS-H-elongata_contig20707:5633..5705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 5634..5705 -
1622930157.1355226-CDS-H-elongata_contig20707:6494..66891622930157.1355226-CDS-H-elongata_contig20707:6494..6689Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 6495..6689 -
1691679302.988966-CDS-H-elongata_contig20707:6494..66891691679302.988966-CDS-H-elongata_contig20707:6494..6689Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20707 6495..6689 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20707.5930.1

>prot_H-elongata_contig20707.5930.1 ID=prot_H-elongata_contig20707.5930.1|Name=mRNA_H-elongata_contig20707.5930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
HQVFCELERVLDAELDFRAEAQAMEKIAAGVAYTVDGRRAVPPIVVPRPV
PGLYSGRVLVMEYVQGMALNRLAEKLAELGFTETSPEARLLGKRLLASLT
EAFGRMIFGAGFVHGDPHPGNIFVMDGGKVALIDCGQVKQISMKQKLRLA
SLVCKLERWNKPGGPSVADIAKDVR
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mRNA from alignment at H-elongata_contig20707:2522..6689-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20707.5930.1 ID=mRNA_H-elongata_contig20707.5930.1|Name=mRNA_H-elongata_contig20707.5930.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4168bp|location=Sequence derived from alignment at H-elongata_contig20707:2522..6689- (Himanthalia elongata Himel1 dioecious)
CATCAGGTGTTCTGTGAATTGGAGCGAGTGTTGGATGCGGAGCTCGACTT
CCGAGCGGAGGCCCAGGCGATGGAGAAGATCGCCGCGGGGGTTGCCTACA
CCGTGGACGGCAGGCGCGCGGTGCCTCCGATTGTCGTGCCGAGACCTGTG
CCGGGTCTCTACAGCGGCAGGGTTTTGGTCATGGAGTATGTGCAGGTTAG
TTACGACGCTTTCGCGTGAAGTGTCGTGTCTACAAAAAAAAACCCAGGTT
GTTTTGTTGGTTTGACGCGCCGAATGGTGACTAACTGTGGAGGCGTTCTG
GCTGTCTATTTGATGGTTGGTTTCTCCTGCTTGTTTGTATGTCCGGTTGG
TTGGTGAATAATCGGATTGTGATTAGTTGTAGATTGGTTGGTGGTTTGTT
TATTTGTTAGTTGGTTATTGGTGTTCGTTGGTTGTATCTTTATATCCTTG
ATTGGTTGTTGTCCTCTCATTGCGATCGTCGTCAAGTCATGGTGTAACGC
TTCAAGACGATATACATCGCGACTGTTTCGGCTAAGTAGATGGGAGGGGG
GGGGGGGTGCAGTTTGTCATGAATGGCTACGCATAGCACGCTGTTTTTGC
GTTATGCTTGTGTATAGCTTTCGGACGATGTCGCACCAAATTACTTGTAT
TTCATCTCTGTTATATGTTGTTACTAGTGCTAGTTCTATTGTGCATATTG
CTGTCGCGAAGGTCGCGTGTTGCACGAGTACCGGTTGGTTTTTGAAGTCA
GCGGGAAGTGATCGTCTTCTTCCGTAAGGACGCGTGGAAAATCTTCTAAC
AGTTAAGGCACCTAAAGCTTGAGTACGCTTTCCTCCTATCCGATTGGTAT
ACCCAATTGTTACCTATCCGATTGTTAAGGCACACAAAGCAATGAAAGAG
GATCGTCTGTCCGACACCTTTCCCTCCCTATCCAATACTCCGTAGCAATG
TTTAGTAACTTTCGCCGTCCTCCGCTTTCCTCAGGGGATGGCTCTCAACA
GGCTGGCGGAAAAGCTGGCGGAACTGGGGTTCACGGAAACGTCTCCCGAG
GCTAGGGTAGGCACCATCAGCGTAATTACTGCTCGAAAGCTTACTTCTTT
CGTACTGAAAGCTTACTTCATACTTCTACATGCTTCGTATTGCACAGTAA
AGTACAGTAGTGTACAGTAAAGTAACAGCAGCAGTGTGAATCTGGATTTC
GACTTGAATCGGGTATGTTCCGTACGTAGACGAGTATGCTGACGTCACCT
GCACAGCCATGTGGGAAAAGGCAGTTCTGCGTTTGAATCTAAATATATAT
ATATATTAAACTAACAAAAACTAAAAATGTAGTCGCCTGAGTAAAGATTT
CGACCATTGGTTAGTTGACGAGGTGTAGGAGGTGTGCTAAACATTCTCAT
CACAAAATGAAAGTATTATTTATAGTATCGGTAGCCGTTAACCGGGGGGA
GGGGTGTAGCTAGTGATGGGGATGGTGGGGGCGCCCCCCCCCCCCGTAAG
GTATACGAGTCAAGAGGGACACATGTTTTCTTTGGACGAACCGTTGCAAA
GGAGAGACGATGTTTCTAAAGATGTGGAAATAATAATGACGGAGACGAGA
GAAAGATGGTGATGACATCAAAGCGTGTAAATGCCTCCCCGCGGAGGGAT
TGCCGAGAGATAAAATATAAAGAAGAAATCAAACCGATCCAACTTTCCCG
CCGTTCTCCCCCTCTTCTCTTCTCTTCGGTGGTTTCAATTTTCTGCCGAT
GAGGCCGTTGAATGCGCTATCCGGGCTTCTCTCCACAACAACAATGTTAT
AAACGGTTGTTGCACAGCTCCTCGGGAAACGGTTGCTTGCGTCCCTCACG
GAGGCATTCGGGCGGATGATCTTCGGAGCGGGCTTCGTGCACGGTGACCC
TCATCCGGTCAGTAAAGAACTGCTCACTCGCTCGGTCGCTGCTTCTGTCT
CTGCTGATGTTGCTGCTGCTGCTTTTGCTGATGTTTTTGATATTACTCGT
GGTGGTGAGGTGTTATCTTCCGCCGGCGTTAGTGTTTGGTGTGTAGTAAA
AAAGAAGACAAAAGGGGTTCTGTGTGACGGCCTTGCGGTATTCCTCGATG
CATGTTGGAAGTGGTTTCTGCTACTTCTGCTGCTGCTGATGATGAGGACG
GCTTGTATGCGTCTTGCGCTACGTCTTTGCCCCATTTTCTCTACTCTCTC
TCCTCTGTATAGAGCTAGCTCTCTTGCTTTGCTACGGGTTGGACATTGTG
CGGATGGCGATTTCGGGTTTCAAAAGAGTTAAGAGGCGGCGGGGGGGGTC
CCCTAAGATTTAACCCTTTGACCTACCTTGGCACCTCTTTTGAGGCCACA
AGCTGGGTTGATTGGCGTCTGATAGGTCTGCATAGGGTGTATTGAGTTGT
TGCGTCACGGTAGATGTTAAGCTACACAATAGGCCTAGGAGAATCGGCAG
AAAGGGAAGCTAATAGAAAATAAGAACAGCAACAGCCGTCACTCGGCTGT
GTTACATACTGCTTTACATCTGTAATTTGTTCCATATCTAATTCGGGTTT
CAATGGTCAATTTTGGTAAGTTTTGCTCTGCTAAAGAAGGCATTATGTAT
TTGAAGAATATCGCGCTCTGTCAGTCTTCGTTATTTGGTTTTTAAATATT
TCATTACTCTGCTACTATTAATACTTTTTATGTATCTCCACTTGCGATGT
GATTTTAATACTTTTTTGGCGATTTTCGCTATTCCTTTGTTGTTCCTTCA
TGGCTACGGTAGTTGTACCAAAATTAGTCAATACTGTACTTGGATTCACC
CCCCCCCACCTGCAATATTTGACTTGAAGAATGTACGCTTTGTCGATCTT
CGAATTGATAATCGAGCAGAGAAGAGGACACTCACTCAGAGGTAGAAACC
CCGACGGAGGCAATACCTGGGCTCGGGATGTTTCCCACCGAGTTAGCGCC
TACCTCTTATGGACCACAAGCGGAAGATATTGACGTTTTGATAGGTGTAT
GCCGTCGTATAGTTATTCAATCAATCAACTTCCTTGCCTGTCTGTCTGCC
TAGTTAATTATCTAAAGATACGTACGGTATAAAATGTATACCAGGTATAT
ATATATATATATATTTATTATATTATTAGTTAATGTTCTAGCTCTGGAGG
TAGTGCTTACTTTTCTTTCTCGTTGCCTTCGCTTTGGACCGAATCGACCC
AACCGCCTGAAACAAAATCAAACCAGGGCAACATCTTCGTGATGGACGGG
GGCAAGGTGGCGCTGATCGACTGCGGTCAGGTGCGCTGTTACGTGTGCGG
AGTGGTCCCTTGAGATTAGTATGATGGTTAGTATGATGAGAGTTAAGGGG
GCTATATTAAAAAAGTGTCGGGGTTAGAGGGATGATTAAGGTAAAAGGGA
TGGAGGTTAAGGGGCCTCAGGTTGAAGGTGTCAAAGTCAACGAAATTATG
AGAGTTAAGGGTGGGGATTTCAAGGAACGAAGGTTACTCTGCTGAGGGTT
ACGATTCGAGGGATGGGGTCTTGAACAGTCCAACGATATGGAGGCGGGGG
GGGGAGGTAATTGCTCAAACGCCCCCGATTCGGGTAAATGACATGTTATA
AATTCGTCCCCTTCCGAGGATAAAACGTACCCATCCCCTATTCTACGATG
ATCGTGTATCCTATGTCAGGCAACCCTCCCCTCCCCTTCCCACACCTGGG
GCACTTAAGTGACACGTTCCCGCTGTCTTTGGATTAGTTGTTCAGTGTTA
GGTTACTCGTTCTCAATTCTTTTTGAGCCCACGATAAAGCTTCAAAAGTA
AACAAAAGGCATAAGAAAAGATAGCCATGCTTAACCCCCATATAACTCGT
TCTGTTTTTACATACTAAATTCGATACAAAATTTGAAACCCAGTTCCCTA
AGGGTTAAAAAAAAGAGAGGAAACGAGAAAGATCATCTACACTATACTGT
AACCCACCCACCTCCCACGCGTTGCGCCCTCGCTTTCAAAGACTAAACTC
ATGCCACATATTTATGCACGTTACGTATTTACTATGTGTGCGTGTTGATG
TAAGGTAAAGCAAATATCCATGAAGCAGAAGCTCCGGCTAGCCAGCCTGG
TGTGCAAGCTGGAACGGTGGAACAAGCCAGGGGGTCCTTCCGTGGCTGAT
ATCGCGAAGGATGTGAGA
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Coding sequence (CDS) from alignment at H-elongata_contig20707:2522..6689-

>mRNA_H-elongata_contig20707.5930.1 ID=mRNA_H-elongata_contig20707.5930.1|Name=mRNA_H-elongata_contig20707.5930.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig20707:2522..6689- (Himanthalia elongata Himel1 dioecious)
CATCAGGTGTTCTGTGAATTGGAGCGAGTGTTGGATGCGGAGCTCGACTT
CCGAGCGGAGGCCCAGGCGATGGAGAAGATCGCCGCGGGGGTTGCCTACA
CCGTGGACGGCAGGCGCGCGGTGCCTCCGATTGTCGTGCCGAGACCTGTG
CCGGGTCTCTACAGCGGCAGGGTTTTGGTCATGGAGTATGTGCAGCATCA
GGTGTTCTGTGAATTGGAGCGAGTGTTGGATGCGGAGCTCGACTTCCGAG
CGGAGGCCCAGGCGATGGAGAAGATCGCCGCGGGGGTTGCCTACACCGTG
GACGGCAGGCGCGCGGTGCCTCCGATTGTCGTGCCGAGACCTGTGCCGGG
TCTCTACAGCGGCAGGGTTTTGGTCATGGAGTATGTGCAGGGGATGGCTC
TCAACAGGCTGGCGGAAAAGCTGGCGGAACTGGGGTTCACGGAAACGTCT
CCCGAGGCTAGGGGGATGGCTCTCAACAGGCTGGCGGAAAAGCTGGCGGA
ACTGGGGTTCACGGAAACGTCTCCCGAGGCTAGGCTCCTCGGGAAACGGT
TGCTTGCGTCCCTCACGGAGGCATTCGGGCGGATGATCTTCGGAGCGGGC
TTCGTGCACGGTGACCCTCATCCGCTCCTCGGGAAACGGTTGCTTGCGTC
CCTCACGGAGGCATTCGGGCGGATGATCTTCGGAGCGGGCTTCGTGCACG
GTGACCCTCATCCGGGCAACATCTTCGTGATGGACGGGGGCAAGGTGGCG
CTGATCGACTGCGGTCAGGGCAACATCTTCGTGATGGACGGGGGCAAGGT
GGCGCTGATCGACTGCGGTCAGGTAAAGCAAATATCCATGAAGCAGAAGC
TCCGGCTAGCCAGCCTGGTGTGCAAGCTGGAACGGTGGAACAAGCCAGGG
GGTCCTTCCGTGGCTGATATCGCGAAGGATGTGAGAGTAAAGCAAATATC
CATGAAGCAGAAGCTCCGGCTAGCCAGCCTGGTGTGCAAGCTGGAACGGT
GGAACAAGCCAGGGGGTCCTTCCGTGGCTGATATCGCGAAGGATGTGAGA
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