mRNA_H-elongata_contig20674.5918.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig20674.5918.1
Unique Name	mRNA_H-elongata_contig20674.5918.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: D8LTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV4_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 5.540e-47
Identity = 77/111 (69.37%), Postives = 89/111 (80.18%), Query Frame = 1

Query:    7 NAFAGEVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILRPEQPINSKVSV 339
             AF  EV+CTFLLV+TVF + DGELGR NA   PL+P  IGMAVL+AHL++IPIDGCSINPARSFATA  NN+WDDHWVFW GPL GGVL T  WE ILRP+QP++ +  V
Sbjct:  157 EAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQPVDDEHEV 267

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A6H5KIW5_9PHAE (Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIW5_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 7.320e-47
Identity = 80/115 (69.57%), Postives = 92/115 (80.00%), Query Frame = 1

Query:    1 AVNAFAGEVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILRPEQPINSKVSVKE 345
            A +AF  EV+CTFLLV+TVFA+ DGELGR  A   PL+P  IGMAVLLAHL++IPIDG SINPARSFATA TNNEW DHWVFW GPL GGVLATV WE ILRP+Q +  + +V +
Sbjct:  160 ATDAFGAEVLCTFLLVVTVFAACDGELGRKTAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWGDHWVFWVGPLLGGVLATVTWEAILRPDQVVEQEKNVPQ 274

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A6H5JZJ3_9PHAE (Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ3_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 2.460e-44
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 1

Query:    1 AVNAFAGEVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILRPEQPINSKVSV 339
            A+ AF  EV+CTFLLV+TVF + DGELGR NA   PL+P  IGMAVL+AHL++IPIDGCSINPARSFATA  NN+WDDHWVFW GPL GGVL T  WE ILRP+Q ++ +  V
Sbjct:  395 AIEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQTVDDEHEV 507

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.050e-29
Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 1

Query:    7 NAFAGEVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILRPEQPINSKVSVKEVAEAFTTA 369
             A  GE++CT+LLV  V  +++  L +     A L+PW IGM V+L H  ++P+DGCSINPARSF +A   N W DHWVFW GPL G  +AT+++E ILRP +P     +    A+ + T+
Sbjct:  159 QALGGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHWVFWLGPLIGATIATLLFEAILRPPEPAPKLEAEDPQAKLYETS 279

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: I0ZAA7_COCSC (Plasma membrane intrinsic protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAA7_COCSC)

HSP 1 Score: 113 bits (282), Expect = 3.380e-24
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1

Query:   22 EVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILR 306
            E + T  LV TVFA++D E   + A +  L P+AIGM V L HL+ IP+DGCSINPARSF  A  +  WD+ WVFW GPL G VLA  ++E I R
Sbjct:  172 ETILTMALVFTVFAATDSERATDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVSGSWDNQWVFWVGPLSGAVLAAAIYELIFR 266

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A8J9WPI2_9CHLO (Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPI2_9CHLO)

HSP 1 Score: 111 bits (278), Expect = 1.160e-23
Identity = 54/104 (51.92%), Postives = 65/104 (62.50%), Query Frame = 1

Query:    4 VNAFAG---EVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILR 306
            VN  AG   E + T  LV TVFA++D E   + A +  L P+AIGM V L HL+ IP+DGCSINPARSF  A    +WDD WVFW GPL G V+A   +E   R
Sbjct:  162 VNNAAGWGLETILTMALVFTVFAATDAERASDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVAGKWDDQWVFWVGPLCGAVMAATAYELFFR 265

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A836CE69_9STRA (Transmembrane channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE69_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.520e-23
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 1

Query:    7 NAFAGEVMCTFLLVLTVFASSDGELGR--NNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILRPEQPINSKVSVKEVAEA 357
             A   E++ T ++ L V      EL        +  L+P A+G A++LAH+++IPIDGCS+NPARSF  A  + EW D W+FW GPL GG++A ++WE ILRP Q ++     +  ++A
Sbjct:  183 QALFAEILSTAMVCLAVIIGLSSELWHLMEKTGMDILLPIAVGTAIVLAHMVLIPIDGCSVNPARSFGAAVISGEWADMWIFWVGPLIGGLVAILLWELILRPPQEVSRSAHTRRSSDA 301

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A8J9SGZ5_9CHLO (Aquaporin PIP2-4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SGZ5_9CHLO)

HSP 1 Score: 106 bits (265), Expect = 4.520e-22
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 1

Query:   22 EVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILR 306
            E + T  LV TVFA++D E   + A +  L P+AIGM VLL HL+ IP+DGCSINPAR+F  +  +  W   WVFWAGP+ G +LA  ++E   R
Sbjct:  151 ETILTMALVFTVFAATDAERAVDTAHLPVLAPFAIGMVVLLCHLVAIPLDGCSINPARTFGASLVSGNWHGQWVFWAGPISGSILAVALYELAFR 245

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A7J7QRE8_9CHLO (Plasma membrane intrinsic protein n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QRE8_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 6.280e-22
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1

Query:    7 NAFAGEVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETI 300
                 E++ T + V  VFA+ D   G N+A +  L P AIG+ V LAH++ IPIDGCS+NPARSF TA  +  W  HW+FW GP+ GG  A +++E +
Sbjct:  150 TGLGAELILTAIFVFVVFAAVDQTRGANSAHLPVLAPLAIGIVVFLAHVVAIPIDGCSVNPARSFGTAVVSRTWQHHWIFWVGPIVGGAAAGLLYEAL 247

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BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Match: A0A6G9ELK3_PINFU (Aquaporin 4 n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A6G9ELK3_PINFU)

HSP 1 Score: 103 bits (256), Expect = 6.440e-21
Identity = 49/97 (50.52%), Postives = 60/97 (61.86%), Query Frame = 1

Query:    1 AVNAFAGEVMCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGCSINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVW 291
            A   F  E+M TF LV TV AS+DG     N +     P  IG+AV+L HL+ I   GCS+NPARSF  A   N W DHWVFW GP+ GG+LA +V+
Sbjct:  152 AAQGFGVELMITFCLVFTVMASTDGNRDDLNGS----APLTIGLAVVLGHLLTIAYTGCSMNPARSFGPALIKNSWQDHWVFWLGPIAGGILAALVY 244

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot

BLAST of mRNA_H-elongata_contig20674.5918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTV4_ECTSI	5.540e-47	69.37	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KIW5_9PHAE	7.320e-47	69.57	Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0...	[more]
A0A6H5JZJ3_9PHAE	2.460e-44	68.14	Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A835YY46_9STRA	5.050e-29	45.45	Aquaporin n=1 Tax=Tribonema minus TaxID=303371 Rep...	[more]
I0ZAA7_COCSC	3.380e-24	53.68	Plasma membrane intrinsic protein n=1 Tax=Coccomyx...	[more]
A0A8J9WPI2_9CHLO	1.160e-23	51.92	Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2...	[more]
A0A836CE69_9STRA	1.520e-23	41.18	Transmembrane channel protein n=1 Tax=Tribonema mi...	[more]
A0A8J9SGZ5_9CHLO	4.520e-22	49.47	Aquaporin PIP2-4 n=1 Tax=Coccomyxa sp. Obi TaxID=2...	[more]
A0A7J7QRE8_9CHLO	6.280e-22	45.92	Plasma membrane intrinsic protein n=2 Tax=Scenedes...	[more]
A0A6G9ELK3_PINFU	6.440e-21	50.52	Aquaporin 4 n=1 Tax=Pinctada fucata TaxID=50426 Re...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig20674	contig	H-elongata_contig20674:2985..6748 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	166.4
Seed ortholog evalue	7.9e-39
Seed eggNOG ortholog	2880.D8LTV5
Preferred name	MIP
KEGG ko	ko:K09863,ko:K09864,ko:K09865,ko:K09866,ko:K09867,ko:K09868,ko:K09872
KEGG TC	1.A.8,1.A.8.11,1.A.8.8
KEGG Pathway	ko04924,ko04962,ko04964,ko04970,ko04976,map04924,map04962,map04964,map04970,map04976
GOs	GO:0000003,GO:0000302,GO:0000323,GO:0001101,GO:0001568,GO:0001654,GO:0001655,GO:0001656,GO:0001666,GO:0001822,GO:0001944,GO:0002088,GO:0002237,GO:0002790,GO:0003008,GO:0003014,GO:0003091,GO:0003094,GO:0003097,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005102,GO:0005198,GO:0005212,GO:0005215,GO:0005216,GO:0005217,GO:0005221,GO:0005223,GO:0005253,GO:0005261,GO:0005267,GO:0005326,GO:0005372,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005764,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005791,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005887,GO:0005901,GO:0005902,GO:0005903,GO:0005911,GO:0006139,GO:0006163,GO:0006164,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006820,GO:0006833,GO:0006836,GO:0006855,GO:0006869,GO:0006884,GO:0006915,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007565,GO:0007568,GO:0007586,GO:0007588,GO:0007589,GO:0007600,GO:0007601,GO:0008092,GO:0008150,GO:0008152,GO:0008154,GO:0008219,GO:0008284,GO:0008324,GO:0008361,GO:0008509,GO:0008519,GO:0008643,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009611,GO:0009612,GO:0009617,GO:0009624,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009887,GO:0009888,GO:0009892,GO:0009914,GO:0009925,GO:0009941,GO:0009987,GO:0009991,GO:0010008,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010053,GO:0010054,GO:0010226,GO:0010243,GO:0010256,GO:0010466,GO:0010496,GO:0010591,GO:0010592,GO:0010605,GO:0010632,GO:0010634,GO:0010817,GO:0010876,GO:0010941,GO:0010951,GO:0010959,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0015075,GO:0015077,GO:0015079,GO:0015103,GO:0015112,GO:0015144,GO:0015166,GO:0015168,GO:0015238,GO:0015250,GO:0015267,GO:0015276,GO:0015318,GO:0015669,GO:0015670,GO:0015672,GO:0015696,GO:0015698,GO:0015701,GO:0015706,GO:0015711,GO:0015718,GO:0015721,GO:0015722,GO:0015791,GO:0015793,GO:0015833,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016323,GO:0016324,GO:0018130,GO:0018995,GO:0019222,GO:0019233,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019755,GO:0019899,GO:0019904,GO:0020003,GO:0021537,GO:0021591,GO:0021670,GO:0021700,GO:0022411,GO:0022414,GO:0022600,GO:0022603,GO:0022607,GO:0022622,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030029,GO:0030036,GO:0030042,GO:0030054,GO:0030072,GO:0030104,GO:0030133,GO:0030135,GO:0030136,GO:0030141,GO:0030154,GO:0030155,GO:0030157,GO:0030162,GO:0030165,GO:0030184,GO:0030185,GO:0030334,GO:0030335,GO:0030424,GO:0030430,GO:0030658,GO:0030659,GO:0030667,GO:0030900,GO:0030950,GO:0030952,GO:0031045,GO:0031090,GO:0031224,GO:0031225,GO:0031226,GO:0031253,GO:0031300,GO:0031301,GO:0031302,GO:0031303,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031410,GO:0031526,GO:0031625,GO:0031667,GO:0031668,GO:0031960,GO:0031965,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032127,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032835,GO:0032870,GO:0032879,GO:0032940,GO:0032941,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0033326,GO:0033363,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0033762,GO:0033993,GO:0034219,GO:0034220,GO:0034599,GO:0034614,GO:0034641,GO:0034644,GO:0034654,GO:0035295,GO:0035377,GO:0035378,GO:0035379,GO:0035690,GO:0035821,GO:0036293,GO:0036294,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0042044,GO:0042045,GO:0042060,GO:0042127,GO:0042221,GO:0042383,GO:0042476,GO:0042493,GO:0042538,GO:0042542,GO:0042592,GO:0042594,GO:0042631,GO:0042802,GO:0042886,GO:0042891,GO:0042981,GO:0042995,GO:0043005,GO:0043010,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043269,GO:0043270,GO:0043281,GO:0043434,GO:0043624,GO:0043627,GO:0043656,GO:0043657,GO:0043679,GO:0043855,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044241,GO:0044249,GO:0044271,GO:0044281,GO:0044297,GO:0044298,GO:0044306,GO:0044389,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045765,GO:0045766,GO:0045785,GO:0045861,GO:0046068,GO:0046390,GO:0046483,GO:0046541,GO:0046658,GO:0046677,GO:0046683,GO:0046688,GO:0046689,GO:0046691,GO:0046717,GO:0046873,GO:0046875,GO:0046877,GO:0046878,GO:0046879,GO:0046903,GO:0046942,GO:0048145,GO:0048146,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048588,GO:0048589,GO:0048592,GO:0048593,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050878,GO:0050886,GO:0050891,GO:0050896,GO:0050953,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051181,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051261,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051290,GO:0051291,GO:0051336,GO:0051346,GO:0051384,GO:0051458,GO:0051591,GO:0051592,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051924,GO:0051928,GO:0052547,GO:0052548,GO:0052652,GO:0055037,GO:0055038,GO:0055044,GO:0055085,GO:0055086,GO:0060255,GO:0060322,GO:0060429,GO:0060456,GO:0060491,GO:0060548,GO:0060560,GO:0060986,GO:0061326,GO:0061437,GO:0061440,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0065010,GO:0070062,GO:0070293,GO:0070295,GO:0070301,GO:0070382,GO:0070482,GO:0070633,GO:0070887,GO:0071214,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071260,GO:0071280,GO:0071288,GO:0071300,GO:0071310,GO:0071320,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071453,GO:0071456,GO:0071462,GO:0071466,GO:0071470,GO:0071472,GO:0071474,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0071732,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072009,GO:0072012,GO:0072014,GO:0072019,GO:0072020,GO:0072022,GO:0072032,GO:0072044,GO:0072070,GO:0072073,GO:0072080,GO:0072170,GO:0072205,GO:0072207,GO:0072210,GO:0072220,GO:0072224,GO:0072229,GO:0072230,GO:0072232,GO:0072234,GO:0072236,GO:0072237,GO:0072239,GO:0072243,GO:0072358,GO:0072359,GO:0072488,GO:0072521,GO:0072522,GO:0080090,GO:0080147,GO:0080170,GO:0085018,GO:0090066,GO:0090407,GO:0090558,GO:0090596,GO:0090627,GO:0097159,GO:0097205,GO:0097237,GO:0097305,GO:0097327,GO:0097366,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0099094,GO:0099402,GO:0099503,GO:0104004,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1901135,GO:1901137,GO:1901293,GO:1901342,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901618,GO:1901652,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902743,GO:1902745,GO:1903561,GO:1904018,GO:1905392,GO:1990349,GO:2000026,GO:2000116,GO:2000117,GO:2000145,GO:2000147
EggNOG free text desc.	water channel activity
EggNOG OGs	COG0580@1,KOG0223@2759
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko02000,ko04147
Hectar predicted targeting category	signal peptide
Exons	3
Model size	1558
Cds size	345
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig20674.5918.1	prot_H-elongata_contig20674.5918.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig20674 4171..6721 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930155.8979013-UTR-H-elongata_contig20674:2984..4170	1622930155.8979013-UTR-H-elongata_contig20674:2984..4170	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig20674 2985..4170 -
1691679302.4657805-UTR-H-elongata_contig20674:2984..4170	1691679302.4657805-UTR-H-elongata_contig20674:2984..4170	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig20674 2985..4170 -
1622930155.974112-UTR-H-elongata_contig20674:6721..6748	1622930155.974112-UTR-H-elongata_contig20674:6721..6748	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig20674 6722..6748 -
1691679302.5177038-UTR-H-elongata_contig20674:6721..6748	1691679302.5177038-UTR-H-elongata_contig20674:6721..6748	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig20674 6722..6748 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930155.9130173-CDS-H-elongata_contig20674:4170..4303	1622930155.9130173-CDS-H-elongata_contig20674:4170..4303	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig20674 4171..4303 -
1691679302.4799194-CDS-H-elongata_contig20674:4170..4303	1691679302.4799194-CDS-H-elongata_contig20674:4170..4303	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig20674 4171..4303 -
1622930155.930623-CDS-H-elongata_contig20674:4529..4623	1622930155.930623-CDS-H-elongata_contig20674:4529..4623	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig20674 4530..4623 -
1691679302.4886453-CDS-H-elongata_contig20674:4529..4623	1691679302.4886453-CDS-H-elongata_contig20674:4529..4623	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig20674 4530..4623 -
1622930155.94815-CDS-H-elongata_contig20674:6603..6721	1622930155.94815-CDS-H-elongata_contig20674:6603..6721	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig20674 6604..6721 -
1691679302.5025954-CDS-H-elongata_contig20674:6603..6721	1691679302.5025954-CDS-H-elongata_contig20674:6603..6721	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig20674 6604..6721 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig20674:2985..6748-
coding sequence from alignment at H-elongata_contig20674:2985..6748-

protein sequence of mRNA_H-elongata_contig20674.5918.1

>prot_H-elongata_contig20674.5918.1 ID=prot_H-elongata_contig20674.5918.1|Name=mRNA_H-elongata_contig20674.5918.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MCTFLLVLTVFASSDGELGRNNAAIAPLVPWAIGMAVLLAHLIMIPIDGC
SINPARSFATAFTNNEWDDHWVFWAGPLFGGVLATVVWETILRPEQPINS
KVSVKEVAEAFTTA*

mRNA from alignment at H-elongata_contig20674:2985..6748-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig20674.5918.1 ID=mRNA_H-elongata_contig20674.5918.1|Name=mRNA_H-elongata_contig20674.5918.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3764bp|location=Sequence derived from alignment at H-elongata_contig20674:2985..6748- (Himanthalia elongata Himel1 dioecious)
GCCGTTAATGCCTTTGCTGGCGAGGTGATGTGTACATTCCTCCTCGTTCT
TACGGTCTTCGCCTCCAGCGACGGAGAGCTCGGTCGTAATAATGCCGCTA
TCGCCCCCCTCGTTCCTTGGGCTATTGGCATGGCCGTCCTCTTGGGTGAG
CTTTCGTACATTCTTCGCGATTGTCTATGTGGACATCTTCCGACTCACTT
GCTGTGTAGCGGGATCGACTCGCCAATTACAATGAAAACAAGCTTCCTGC
CCGTGGCGGAAGAGACCACTCCCGGTCGGAAGCGGGAGGCGTTTGAATCA
AGCGCTATAGCGAAACGTAATCTTTCCCGGGAGATGATCGACGAGATAGG
CGCAAAGTGACGAATGAAACAGTACAATACTTTCGGGCAGTTCATCCCGT
CCTGCTAGCGCCCTTGCCTTGATCGCCTTTTCTTTTTTCTTTTAACCACG
AACTGCATTGGGAACTACCTACAACAATTGGTCGAGTTGGTGCACGATCG
GATTGTAATGGTTGCCCTCTTTGCTAGTAATGTACACACTCAAACCTGTC
AATAGTTAATCCCCTGGACTTCAATGCGCATCGTGTAAATAAAGTGTCGA
TGTTCGGAGAGTTCGAATGACTTCATATCTTAACAAAAAAAATGAAGAAC
ATATACCACCTACTACATAATAGACACAATAATAGTTGAACCTGACGGTA
GCTAGTCCCCTTCACGTCAATAAGACTGATGTTCATAAAATGCTGATTTT
CCCGGACTTAGATCATAGAAGGATGTTTTGGGAAGAAAATAATATCGACT
TTTCTACGGTGTGGTACTATTTATCATTAACACTTAAATTAGTAAACGTA
TGCGCAAAGCTGTCCTATATTTGTCGCTACTTGACTCTCTTATATTTTCA
TTTTAAAAAACCTCATTCCAACCCCTCGAACATCCACTCATTCTTAGCAC
CATGAGAGGTGCAGTCCAGGGGGCCAACTATCGTCAGGTTCGAATCTGGA
CAATACTACCCTTGAGTACAAAATCTTCACACATGATAAATCATGTTCCC
CAATATTAGTAAGTTCGTCGGGTCATGTGGGGACGCCAACTGAAAGCCTA
GGAGTATAATATTGAAACAGAGACTAAATAGTTAGCGTAGGTCTACTCAA
CTGTACGGATACAAACTCATCCCCCTTATTCCCATGCCTAATTACGTTTA
ATCAAGTATATATCTACTACCTACCACAATAGCAGCATTTTACGACCTCT
AATACCCATTATCATCCCGTACATAATAGTCCCAATGGTTCAATTGGTAT
CCTCGAGAGCTTCTGACGTTGGGACGTGAGTTCGAACCTCGGCGCAGTCA
CACGAACTGGGATTTTCTCACTTAGTAACCCAACAAGTGGAGCACGAATA
TTTCATGGGTACACGAAATTCGCCTCTACGGTCGACAAGGAAAGGGACAG
CTGAATCCTTCTAGCGGTGAAAAGGTAAGGCAATTACCGCAGAAAAAAGA
TGGAGAAATCCGGTGTGACTTTCCTCCTGTGTGACCCGGCTGGTTCGTCC
ACAAGTCTGACGTCCCACAATAAAATGGGATGACACAACAACATGATACT
TAAAAATAATACACCTCAACCCCCTAATCACATTTCCATAATCATCACTA
TATATAGTGATTATTACCGGACGTATCTTTTTGCTTCTTCACCAATATTG
ATACTACTTTGTAGTAGTTTGCCTATGCTCAACTAAACATAAAGTGCAAC
TTTGTTACCACCATCCTCCTCTGTACCTGTCCACTCTCTTTTATGCCATA
CTCTGGTTTCTTTGGCGCCCCTATATTACTTCATCATGAATTAATAATGT
AAGAGTACAGTATAACAATGGGGTTTCTCCCGACATTATACTGACCCGAT
GTGACTATCAGTAGAAACCAGATTAATAATATGTGACGATTTTGTGCTCA
TACGTAGTAATATACACCCTCGAATCTGACGATAGTTGGTCCCCTGGACA
GCACCTCTCACGGCGCTAAGAAGGCGTGCGTGTTCAGAGGGTTTGAATGA
GTTATATGTTTTTTTAGAAATATGTTGAAGTCGTTCATTCTCCCTGCCCC
CACCCCTCTTTGGTTTCTATCGCAGCCCATCTGATCATGATTCCGATTGA
CGGTTGCTCCATCAACCCGGCCCGCTCCTTTGCTACCGCCTTCACAAACA
ACGAGTGGGATGACCACTGGTAAGTAAGTTGGGGGAGTGTGCAGCGAGCC
TCGAGAAGTTGCCTGCAATGTGTATTGCGAGTTACCGGGTGGGTTATTTT
CATCGTCCCTGAGTATTTCACCCATACAGTAGATGGTGTGTATTACGATA
TATCACCCGAGTGGGGAATAATACTGGTTCCCTAACTCCTCGGAGCTCTT
TACAATACGCTCATCCACCCGCTGCTTTGTGTGTGGTGTATGCAGGGTGT
TCTGGGCCGGCCCGCTGTTTGGCGGTGTCCTTGCCACCGTTGTGTGGGAA
ACCATCCTTCGCCCCGAACAGCCCATCAACTCGAAGGTCTCCGTCAAGGA
AGTGGCGGAGGCTTTCACCACCGCTTAACGCTGAAGCTTCCGCACTGAAC
ATTTTCCTACGCTAAGATACGTTCCGCGATTTCTATCGTTCGATTATACT
GACCGTGGAATTATGGCCTTTGGAGATTTGGGTAAGGCAATGTGAGGCAA
GGAATAATAATAATACTGTTTGTGGCGTAGTACCCATCGCTTCCTTGAAC
GGATTTCAAGGTTTTGGCTGTGATTCCACACCTACCTCCTCATGTTGTGT
CGGCTTGAAAGCCAACTATATCACAGTAATCGGATAATAAGGAGCTACTG
GCTAGCTAGGTGGTATACTTCATGTTCATTCAAAAAAGGTTGAGCATGTG
TTTTTTAACCCTGCATGGTTTGTCATTGACGCGTCCCGGGATAGGTTCAG
GAAGCAACCCTGATGAGGCGAATCATATTAAAGACAGAGAATATATGTAT
ATTTATATATATATAATCTACTATAATTATTTAGCTCTCACGAGTGGCTA
TAGGCGGAATTCACGTAAAGAAAAGGTTGATCATGTTTTTTAAAGTCTGC
ATCGTTTGTTTGTCATTGATGCGTCCCCGGAGAGGTTCATGAAGCCCTGA
TGGAGTGATGATCCCTATTACACGCAGGGATGATCTATCTCTACTGTAGT
TAGCTCTCACGCGTGAGTACAAGGTGGGGTACACGCAAATAAATGGCTGT
ACACCATGCGTTTTAAAGTCTGTATGATTGGTTATGACGCGTCCCGGGAG
ATATTCAGGAAACCTCTTGTGAAGGGAATTACACACATATTATATAAATC
TGTACCGTAATAAGCTTTCAAGGGTACGTGTGATTCTACCGGTTGATGCT
ACACATATGTACGTAGATAAGCGGAACTCTCGTATTGAGTTTTAAGATAA
TTTGCCGCTATGTTTGCAAATGCCAACGCACGTTTTGATATATATCTGTG
CGACTGTAGACACACATCGTCTTCTCTCGAAGCACCGAAAAGCGACTTGA
TGCGTTGGGACGGGTCGAGGTATGATGTCCCGTTCGATGTTGTTACTTTA
GCAAGAAGAAGGCACGATTTGTCTAGCTCCTACTACTCGTTGGACCACCT
TGCAAATGCCTGTTTCCTGTGGGGTTATCCTTCGTGGTGACTATACCTGA
CGGAGGGGAATTGAACTCAAACGAAGAATGAGGACGCTGCGCGAGCCGAC
TCGCGGGAATGGAT

Coding sequence (CDS) from alignment at H-elongata_contig20674:2985..6748-

>mRNA_H-elongata_contig20674.5918.1 ID=mRNA_H-elongata_contig20674.5918.1|Name=mRNA_H-elongata_contig20674.5918.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig20674:2985..6748- (Himanthalia elongata Himel1 dioecious)
ATGTGTACATTCCTCCTCGTTCTTACGGTCTTCGCCTCCAGCGACGGAGA
GCTCGGTCGTAATAATGCCGCTATCGCCCCCCTCGTTCCTTGGGCTATTG
GCATGGCCGTCCTCTTGGATGTGTACATTCCTCCTCGTTCTTACGGTCTT
CGCCTCCAGCGACGGAGAGCTCGGTCGTAATAATGCCGCTATCGCCCCCC
TCGTTCCTTGGGCTATTGGCATGGCCGTCCTCTTGGCCCATCTGATCATG
ATTCCGATTGACGGTTGCTCCATCAACCCGGCCCGCTCCTTTGCTACCGC
CTTCACAAACAACGAGTGGGATGACCACTGCCCATCTGATCATGATTCCG
ATTGACGGTTGCTCCATCAACCCGGCCCGCTCCTTTGCTACCGCCTTCAC
AAACAACGAGTGGGATGACCACTGGGTGTTCTGGGCCGGCCCGCTGTTTG
GCGGTGTCCTTGCCACCGTTGTGTGGGAAACCATCCTTCGCCCCGAACAG
CCCATCAACTCGAAGGTCTCCGTCAAGGAAGTGGCGGAGGCTTTCACCAC
CGCTTAAGGTGTTCTGGGCCGGCCCGCTGTTTGGCGGTGTCCTTGCCACC
GTTGTGTGGGAAACCATCCTTCGCCCCGAACAGCCCATCAACTCGAAGGT
CTCCGTCAAGGAAGTGGCGGAGGCTTTCACCACCGCTTAA