mRNA_H-elongata_contig20606.5891.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI) HSP 1 Score: 378 bits (970), Expect = 6.380e-130 Identity = 194/225 (86.22%), Postives = 203/225 (90.22%), Query Frame = 1
Query: 19 ITLLFCNRPFDLYLSLILQGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAM-DAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEV 690
+ LL R + + L QG+YLQALECMERGLVLRQHFFGSDS+EVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDD GRAVTYNNLACYYRRRGKLH+ALQYL KALKIEAKMG RVEHPADTHLNTCAVLSQ+GRHQGALEHAQSALILLQEE+FGG AT G A + DQPPRADRIAVLAIAYHNMGVEQEFLKKFE SLQSYRKGVEV
Sbjct: 6 VELLALQRIDETCMQLQQQGDYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGATVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 230
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 367 bits (943), Expect = 8.240e-125 Identity = 191/264 (72.35%), Postives = 222/264 (84.09%), Query Frame = 1
Query: 73 QGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRAISARDCKIREELIRRHSRKPRTGDRGRRPSSKA 864
QGNYL+ALECMERGLVLRQHFFG+DSDEVW ACK+VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD+ GRAVT+NNLACYYRR+GKLHAALQYLQKALKIE K+ +V++PADT+LNTCAVLSQ+GRHQ ALEHAQ ALILLQEE+ + G M ++ P+ADRIAVLAIAYHN+GVE EFLKKF+QSLQSYRKGVEV++ +LG +HA+T+TLRN+ +AARRAI RD + R + + RK R G G R + A
Sbjct: 27 QGNYLEALECMERGLVLRQHFFGADSDEVWRACKVVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKLD-QVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEELSRVL----GPMADGNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQARLQNLESKGRKGRGGGAGTRRAKPA 285
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA) HSP 1 Score: 360 bits (925), Expect = 6.530e-122 Identity = 185/240 (77.08%), Postives = 209/240 (87.08%), Query Frame = 1
Query: 73 QGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRAISARDCKIR 792
QGNYL+ALECMERGLVLRQHFFG++SDEVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD GRAVT+NNLACYYRR+GKLH+ALQYLQ ALKIEAK+ RV++PADT+LNTCAVLSQ+GRHQ ALEHAQ ALILLQEE+ V G M + P+ADRIAVLAI+YHN+GVE EFLKKF+QSLQSYRKGVEVA+ +LG HA+TITLRN+ +AA+RAI ARD +R
Sbjct: 35 QGNYLEALECMERGLVLRQHFFGAESDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHSALQYLQNALKIEAKLA-RVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEELSRVV----GPMADGKEAPKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 356 bits (913), Expect = 6.520e-120 Identity = 179/236 (75.85%), Postives = 203/236 (86.02%), Query Frame = 1
Query: 73 QGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRAISARD 780
QGNYL+ALECMERGLVLRQHFFG++S+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD G+AVTYNNLACYYRR+GKLH+ALQYLQKALKIE+KM VE+PADTHLNTCAVLSQ+GRH ALEHAQS++ILLQEE+F G D PR DR+AVL IAYHN+GVEQEFLKK+EQS+ SYRKGVEV + +LG HA+T+TLRN+ +AARRA+ ARD
Sbjct: 83 QGNYLEALECMERGLVLRQHFFGAESEEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDQKGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMK-DVENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEELFQG-----------DGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA) HSP 1 Score: 349 bits (895), Expect = 1.400e-117 Identity = 178/235 (75.74%), Postives = 200/235 (85.11%), Query Frame = 1
Query: 76 GNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRAISARD 780
G YL+ALECMERGLVLRQHFFG+ SDEVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD GRAVT+NNLACYYRR+GKLHAALQYLQKALKIE ++ V++PADT+LN CAVLSQ+GRHQ ALEHAQ ALILLQEE+ + + PP+ADR+AVLAIAYHN+GVEQEFLKK QSLQSYRKGVEVA+ YLGG+HA+T TLRN+ +AARR + ARD
Sbjct: 36 GQYLEALECMERGLVLRQHFFGAGSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIEGRLE-SVDNPADTYLNACAVLSQLGRHQSALEHAQQALILLQEELSSVLGSDNAG------PPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARD 263
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A836CET2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET2_9STRA) HSP 1 Score: 343 bits (879), Expect = 3.070e-115 Identity = 174/217 (80.18%), Postives = 190/217 (87.56%), Query Frame = 1
Query: 73 QGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKD---------QPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQ 696
QGNYL+ALECMERGLVLRQHFFGSDSDEVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD +G+AVT NNLACYYRR+GKLHAALQYLQ+ALKIEA++G RV+ PADTHLNTCAVLSQ+GRHQGAL+HAQSALILLQEE+FGG + + A D PRADR+AVLAIAYHNMGVEQEFLK+F+ SLQSYRKGVEVAQ
Sbjct: 25 QGNYLEALECMERGLVLRQHFFGSDSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDAVGKAVTLNNLACYYRRQGKLHAALQYLQRALKIEARLGSRVQTPADTHLNTCAVLSQLGRHQGALDHAQSALILLQEELFGGGSRALPSSCAGDGELGLGLSQASPRADRVAVLAIAYHNMGVEQEFLKRFDHSLQSYRKGVEVAQ 241
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA) HSP 1 Score: 347 bits (889), Expect = 4.290e-114 Identity = 182/249 (73.09%), Postives = 214/249 (85.94%), Query Frame = 1
Query: 76 GNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGV---ATTGG--AMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRAISARDCK---IREE 798
GNYL+ALECMERGLVLRQHFFGSDS+EVWSAC+ VGEMCNLLAMTYLQQ+D+ MVLELLKKAEILTERDD GRAVT+NN ACYYRR+GKLHAALQ+LQKAL+IE+++ V + ADT+LNTCAVLSQ+GRHQ ALEHAQ+ALILLQEE+F G+ A GG A A PP+ DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+ +LGG+HA+ +TLRN+ AARRA +++D K +REE
Sbjct: 135 GNYLEALECMERGLVLRQHFFGSDSNEVWSACRTVGEMCNLLAMTYLQQQDYAMVLELLKKAEILTERDDKGRAVTFNNFACYYRRQGKLHAALQFLQKALRIESRL-VDVPNAADTYLNTCAVLSQLGRHQSALEHAQNALILLQEELFHGIEGGAGMGGEEAGLAPPNPPK-DRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKDPKGRKLREE 381
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA) HSP 1 Score: 340 bits (873), Expect = 5.660e-114 Identity = 169/234 (72.22%), Postives = 199/234 (85.04%), Query Frame = 1
Query: 73 QGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRAISA 774
QGNYL+ALECMERGLVLRQHFFG+DS EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTE+D+ GRA T+NNLACYYRR+GKLHAALQYLQKALKIE+ + V++PADTH+N CAVLSQ+GRHQ AL+HAQ+A+ILLQEE+ G A PP+ADRIAVLAIAYHN+GVEQEFLK++EQS+ SY+KGVEVA+ YLG HA+ +TL N+ +AA++ +A
Sbjct: 23 QGNYLEALECMERGLVLRQHFFGADSPEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDEAGRAATFNNLACYYRRQGKLHAALQYLQKALKIESGLT-NVQNPADTHINACAVLSQLGRHQTALDHAQNAIILLQEELLSPPGVVGAA------PPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A482SDU3_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDU3_9ARCH) HSP 1 Score: 318 bits (814), Expect = 1.900e-105 Identity = 162/218 (74.31%), Postives = 183/218 (83.94%), Query Frame = 1
Query: 103 MERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAA 756
MERGLVLRQH FG+DS+EVW ACK VGEMCNLLAMTYLQQEDF MVLELLKKAEILTE+D GRA TYNNLACYYRR+GKLH+ALQYLQKALKIE+K+ V++PADTH+N CAVLSQ+GRHQ ALEHAQSALILLQEE+ + G A P+ADRIAVLAIAYHN+GVEQEFLK+FEQS+ SY+KG EVA+ YLG HA+T TL N+ AA
Sbjct: 1 MERGLVLRQHMFGADSEEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDPAGRAATYNNLACYYRRQGKLHSALQYLQKALKIESKLP-NVQNPADTHINACAVLSQLGRHQTALEHAQSALILLQEELLSPPGSVGAAA------PQADRIAVLAIAYHNIGVEQEFLKRFEQSILSYKKGAEVAERYLGTKHAITRTLNNSLAAA 211
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Match: A0A2R5G2B1_9STRA (Clustered mitochondria protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2B1_9STRA) HSP 1 Score: 331 bits (848), Expect = 1.890e-101 Identity = 163/231 (70.56%), Postives = 194/231 (83.98%), Query Frame = 1
Query: 73 QGNYLQALECMERGLVLRQHFFGSDSDEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDIGRAVTYNNLACYYRRRGKLHAALQYLQKALKIEAKMGYRVEHPADTHLNTCAVLSQVGRHQGALEHAQSALILLQEEIFGGVATTGGAMDAKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEQSLQSYRKGVEVAQAYLGGNHAVTITLRNTTMAARRA 765
QG YL+ALECMERGLVLRQHFFG SDEVW+ACK VG+MCNLLAMTYLQQE+F MVLELLKKAEILTERD+ GRAVTYNNLACY+RR GKLHAALQYLQKALK+E+++ V + ADTHLN CAVLSQ+GRH GALEHAQ+ALI LQEE+F G + + DRIAVLAIAYHN+GVEQEFLK+FE ++ SYRKGV++++ +LG +H +T+TLRN+ +AAR+A
Sbjct: 462 QGKYLEALECMERGLVLRQHFFGPSSDEVWAACKTVGQMCNLLAMTYLQQEEFSMVLELLKKAEILTERDEHGRAVTYNNLACYFRRTGKLHAALQYLQKALKVESRLE-NVTNRADTHLNLCAVLSQLGRHAGALEHAQAALIQLQEELFPGALSASAKSSSSAALASTDRIAVLAIAYHNIGVEQEFLKRFEMAIDSYRKGVDISETHLGTDHGITVTLRNSYLAARQA 691 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20606.5891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20606.5891.1 >prot_H-elongata_contig20606.5891.1 ID=prot_H-elongata_contig20606.5891.1|Name=mRNA_H-elongata_contig20606.5891.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp PERDSLITLLFCNRPFDLYLSLILQGNYLQALECMERGLVLRQHFFGSDSback to top mRNA from alignment at H-elongata_contig20606:5074..6560- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20606.5891.1 ID=mRNA_H-elongata_contig20606.5891.1|Name=mRNA_H-elongata_contig20606.5891.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1487bp|location=Sequence derived from alignment at H-elongata_contig20606:5074..6560- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20606:5074..6560- >mRNA_H-elongata_contig20606.5891.1 ID=mRNA_H-elongata_contig20606.5891.1|Name=mRNA_H-elongata_contig20606.5891.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig20606:5074..6560- (Himanthalia elongata Himel1 dioecious)back to top |