mRNA_H-elongata_contig205699.5873.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig205699.5873.1
Unique NamemRNA_H-elongata_contig205699.5873.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A8F0JZN2_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZN2_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 1.550e-149
Identity = 220/232 (94.83%), Postives = 228/232 (98.28%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            MRYFPF+LEQLRIL+ I+NEKSLKQAA+KLYISQPAISLQIQKLE+KLD PLFEREQKQVCFTSTGELILDYAARILVLCEEANKS+LYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRY+YANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPK HKLGRLNSISKHD+YDLKFITLKTHSLSRKVMDRILNENKIESSRLRIE EL
Sbjct:    1 MRYFPFSLEQLRILQAIKNEKSLKQAAEKLYISQPAISLQIQKLESKLDSPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSLLYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYSYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKFHKLGRLNSISKHDLYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIELEL 232          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A8F0F772_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F772_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 1.340e-95
Identity = 140/232 (60.34%), Postives = 182/232 (78.45%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M+YFPF+LEQLRIL+ I+ EKS K AAKKLY+SQPA++LQ+Q LE KLD P+F+R +KQ+CFT TGEL+LDYA RILVLCEEA+ +I+YLKD+ R KLIIGSSNT GTYLLPKIIGLFCRRY+YAN+ LE++ST   +W VA G+ID+GIVGG +  +  +S+QI  +V DE+ LI+PK H       I K D+Y+L FI L   S+ R+ +D++L++N I+S RL+I  EL
Sbjct:    1 MQYFPFSLEQLRILKSIKAEKSFKAAAKKLYLSQPAVTLQVQNLEKKLDFPIFDRSKKQICFTRTGELVLDYATRILVLCEEADNAIMYLKDVNRNKLIIGSSNTIGTYLLPKIIGLFCRRYSYANINLEVNSTYPIAWGVATGEIDLGIVGGRVTNQFSKSIQIIPFVEDELVLIMPKFHPFNTFKLIRKEDIYELNFIALNKQSIVRENIDKVLDQNNIDSKRLKISFEL 232          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A0R6LUS1_UNDPI (Probable RuBisCO transcriptional regulator n=29 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUS1_UNDPI)

HSP 1 Score: 266 bits (680), Expect = 7.390e-86
Identity = 138/233 (59.23%), Postives = 179/233 (76.82%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGY-IPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M+YFPF+LEQLRI++ I+NE ++KQAAK+LY+SQPA+SLQIQKLE ++D P+ +R +KQ+ FT TGELILDYA RIL LCEEA+K+I+YLK +KR  L IGS+   GTY+LPKII LFCRRY+Y +VKLEI STN  SW++ NG++DIGIV    IPKEL+ SL    Y  +EI LILPK HK   + SI+   +Y+L FITLK   + RK+MD +L +  IES +L+I+ EL
Sbjct:    1 MKYFPFSLEQLRIIQAIKNEATIKQAAKRLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAIVYLKKLKRISLTIGSNEIVGTYILPKIIDLFCRRYSYIHVKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYSSLYSTPYFQEEIVLILPKSHKFKDVYSITSEKLYNLDFITLKPDFIGRKLMDNVLKKFNIESDKLKIKLEL 233          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A8F0F6V8_AKKLU (Probable RuBisCO transcriptional regulator n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6V8_AKKLU)

HSP 1 Score: 262 bits (670), Expect = 2.410e-84
Identity = 132/233 (56.65%), Postives = 178/233 (76.39%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVG-GYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M+YFPFNLEQLRI++ I+ E ++KQAA KLY+SQPA+SLQIQKLE ++D P+ +R +KQ+  T TGEL+LDYA RIL LCEEA+K+I+YLK +KR  L IG++ T GTY+LPKII LFC+RY Y  +KLEI  TN  SW++ NG+ID+GIV    IPKEL+ SL  K Y  +EI LILPK H+L  + +I++ ++Y+L FI LK + + RK+MD IL +  I+S +L+I+ EL
Sbjct:    1 MKYFPFNLEQLRIIQAIKTEATIKQAATKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILSLCEEADKAIIYLKKLKRISLTIGTNETVGTYILPKIINLFCKRYPYTRIKLEIHCTNCISWNIVNGKIDLGIVEEDEIPKELYNSLSSKPYFQEEIVLILPKYHELKNVRNITRENLYNLNFIALKPYFIGRKLMDDILKKFNIDSEKLKIKLEL 233          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A8F0F7X1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7X1_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 9.730e-84
Identity = 131/233 (56.22%), Postives = 177/233 (75.97%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVG-GYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M+YFPF+LEQLRI++ ++NE ++KQAAKKLY+SQPA+SLQIQKLE ++D P+ +R +KQ+  T TGEL+LDYA RIL LCEEA+K+I+YLK +KR  L IG++ T GTY+LPKII LFC RY Y  +KLEI+  N  SW++ NG+ID+GIV    IPKEL+ SL  + Y  +E+ LILPK H+L  + +IS+  +Y+L FITLK H + RK+MD  L +  I S +L+I+ EL
Sbjct:    1 MKYFPFSLEQLRIVQAVKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILNLCEEADKAIIYLKKLKRVSLTIGTNETVGTYILPKIINLFCTRYPYTRIKLEINCANCISWNIVNGKIDLGIVEEDEIPKELYNSLSCRPYFQEEMVLILPKYHELKDVRNISREKLYNLNFITLKPHYVGRKLMDDTLQKFNINSDKLKIKLEL 233          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A7U3S1F0_9STRA (Probable RuBisCO transcriptional regulator n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3S1F0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 5.450e-82
Identity = 129/232 (55.60%), Postives = 177/232 (76.29%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M+ FPFNL+QLRIL++I +E S K+AAK LY+SQPAISLQI+K+E+KL LPLFER+++Q+  T  G+L++ Y  RIL LC+E+ +++  L  +KR  LIIG+S +TGTYLLPK+IGLF  RY   NVKL+++S++R SW VANGQIDI I+GG+IP EL  +L++  YV DE+ LI PK H       I K D+YDL FITL+T S+ RK+M+ +LN++ I++SRL+I  EL
Sbjct:    1 MQNFPFNLDQLRILKIIVSEGSFKRAAKTLYVSQPAISLQIRKVESKLGLPLFERDKRQIRLTKAGKLLVQYGNRILNLCDESFRAVEDLHQLKRGTLIIGASKSTGTYLLPKLIGLFRHRYPKINVKLKVNSSHRISWGVANGQIDIAIMGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKEDLYDLNFITLETDSMLRKLMEDLLNQHGIDNSRLKIGMEL 232          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A8F0F9M1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9M1_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 5.140e-78
Identity = 127/233 (54.51%), Postives = 179/233 (76.82%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIV-GGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M+Y PF+LEQLR ++ I+NE ++KQAAKKLY+SQPA+SLQI+KLE+ +  P+ +R+++++ FT TGELILDYA +IL LCEEA+K+ILY K++KR  L IGS+ T G Y+LPKII LFC+RY+YA++KLEIS TN  +W + NG+IDIGIV    +PKEL+ SL    +  +EI LILPK +KL    +I+K ++Y+L FITLK H   RK+MD +L   +I++ +L+I+ +L
Sbjct:    1 MKYLPFSLEQLRTIQTIKNEGTVKQAAKKLYLSQPALSLQIKKLESGIKSPILDRKKRKIYFTRTGELILDYADKILNLCEEADKAILYFKNLKRISLNIGSNYTIGKYILPKIINLFCKRYSYAHIKLEISDTNTIAWDIINGKIDIGIVIEEELPKELYSSLYGTPFFLEEIVLILPKSYKLKGSRNITKTNLYNLNFITLKPHLRRRKLMDDLLERYQIDTKQLKIKLQL 233          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: W0RYG2_PORPP (Probable RuBisCO transcriptional regulator n=2 Tax=Porphyridium TaxID=2791 RepID=W0RYG2_PORPP)

HSP 1 Score: 243 bits (620), Expect = 8.320e-77
Identity = 121/232 (52.16%), Postives = 167/232 (71.98%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            M   PF ++QLRIL+ I  E S K+AA  LYISQPA+SLQ+Q LE +L++PLF+R  K+ C T  G+L+L    RIL +CEE  +++  L++++   LI+G+S TTGTYL+P++IGLF ++Y    V+L++ ST R +WSVANGQID+ ++GG IP EL Q LQI  Y  DE+ LILPK H   +  +I K D+Y L+FITL THS  RKV+D+ILN++ I+SSRL +E EL
Sbjct:    1 MTDLPFTIDQLRILKAIATEGSFKRAADSLYISQPAVSLQVQNLEKQLNIPLFDRGGKKACLTEAGDLLLRNGTRILAMCEETCRALEDLQNLQGGSLIVGASQTTGTYLMPRLIGLFRQQYPQVIVQLQVHSTRRIAWSVANGQIDLAVIGGEIPSELKQILQITSYAEDELALILPKSHPFSKYQNIKKEDLYRLRFITLDTHSTIRKVIDKILNQHGIDSSRLTVEMEL 232          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A4D6WWI9_9FLOR (Probable RuBisCO transcriptional regulator n=1 Tax=Pleonosporium borreri TaxID=2575635 RepID=A0A4D6WWI9_9FLOR)

HSP 1 Score: 243 bits (619), Expect = 1.180e-76
Identity = 121/232 (52.16%), Postives = 164/232 (70.69%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            MR  PF L+QLRIL+ I  E S K+AA  LY+SQPAISLQIQ LE +L+LPLFER  K+   T  G L+L Y  RIL LCEE  +++  +++++   LIIG+S TTGTYL+P+++GLF +RY   NV+L++ ST   SWSVANGQID+ ++GG +P+EL   LQ+  Y  DE+ LILP  H   ++N I K D+Y L+FI L   S  RKV+D++LN++ I+SSR +IE EL
Sbjct:    1 MRDVPFTLDQLRILKAIIKEGSFKRAANSLYVSQPAISLQIQNLEKQLNLPLFERNNKKATLTEAGNLLLQYGNRILALCEETCRALEDIQNLQGGSLIIGASQTTGTYLMPRLLGLFRQRYPQVNVQLQVHSTRLISWSVANGQIDLAVIGGEVPQELKDILQVTSYAEDELALILPVSHNFSKINDIQKEDLYHLRFIALDKQSTIRKVIDKVLNQHDIDSSRFKIEMEL 232          
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Match: A0A1Z1MRA0_9FLOR (Probable RuBisCO transcriptional regulator n=2 Tax=Laurencieae TaxID=2008388 RepID=A0A1Z1MRA0_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 2.290e-76
Identity = 123/232 (53.02%), Postives = 164/232 (70.69%), Query Frame = 1
Query:    1 MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDLPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFITLKTHSLSRKVMDRILNENKIESSRLRIEPEL 696
            MR  PF L+QLRIL+ I  E S K+AA  LY+SQPAISLQIQ LE +L++P+FER  K+   T  G L+L Y  RIL LCEE  +++  +++++   LIIG+S TTGTYL+P++IGLF +RY   NV+L++ ST   SWSVANGQ+D+ I+GG +P EL   LQI  Y  DE+ LILP  H   ++N+I K D+Y L+FI L T S  RKV+D+ILN++ I+SSR  IE EL
Sbjct:    1 MRDLPFTLDQLRILKAIIKEGSFKKAADSLYVSQPAISLQIQNLERQLNIPIFERSSKKATLTEAGNLLLRYGGRILALCEETCRALEDIQNLQGGSLIIGASQTTGTYLMPRLIGLFRQRYPQVNVQLQVHSTRLISWSVANGQVDLAIIGGEVPNELKDILQITSYAEDELALILPISHAFSKVNNIQKEDLYRLRFIALDTQSTIRKVIDKILNQHGIDSSRFTIEMEL 232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig205699.5873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JZN2_9PHAE1.550e-14994.83Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F772_9PHAE1.340e-9560.34Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A0R6LUS1_UNDPI7.390e-8659.23Probable RuBisCO transcriptional regulator n=29 Ta... [more]
A0A8F0F6V8_AKKLU2.410e-8456.65Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F7X1_9PHAE9.730e-8456.22Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A7U3S1F0_9STRA5.450e-8255.60Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F9M1_9PHAE5.140e-7854.51Probable RuBisCO transcriptional regulator n=1 Tax... [more]
W0RYG2_PORPP8.320e-7752.16Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A4D6WWI9_9FLOR1.180e-7652.16Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A1Z1MRA0_9FLOR2.290e-7653.02Probable RuBisCO transcriptional regulator n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig205699contigH-elongata_contig205699:3..698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.7
Seed ortholog evalue6.6e-61
Seed eggNOG ortholog55529.AAC35617
Preferred namerbcR
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.DNA-binding transcription factor activity
EggNOG OGs2S17Z@2759,COG0583@1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size696
Cds size696
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930151.9777958-CDS-H-elongata_contig205699:2..6981622930151.9777958-CDS-H-elongata_contig205699:2..698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig205699 3..698 -
1691679300.9790986-CDS-H-elongata_contig205699:2..6981691679300.9790986-CDS-H-elongata_contig205699:2..698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig205699 3..698 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig205699.5873.1prot_H-elongata_contig205699.5873.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig205699 3..698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig205699.5873.1

>prot_H-elongata_contig205699.5873.1 ID=prot_H-elongata_contig205699.5873.1|Name=mRNA_H-elongata_contig205699.5873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MRYFPFNLEQLRILRVIENEKSLKQAAKKLYISQPAISLQIQKLEAKLDL
PLFEREQKQVCFTSTGELILDYAARILVLCEEANKSILYLKDIKRTKLII
GSSNTTGTYLLPKIIGLFCRRYAYANVKLEISSTNRTSWSVANGQIDIGI
VGGYIPKELHQSLQIKKYVNDEIGLILPKLHKLGRLNSISKHDVYDLKFI
TLKTHSLSRKVMDRILNENKIESSRLRIEPEL
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mRNA from alignment at H-elongata_contig205699:3..698-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig205699.5873.1 ID=mRNA_H-elongata_contig205699.5873.1|Name=mRNA_H-elongata_contig205699.5873.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=696bp|location=Sequence derived from alignment at H-elongata_contig205699:3..698- (Himanthalia elongata Himel1 dioecious)
ATGAGATATTTTCCATTCAATTTGGAGCAATTAAGAATTCTTCGAGTAAT AGAAAATGAAAAAAGTCTTAAACAAGCTGCAAAAAAATTATATATTTCGC AACCAGCTATTAGTTTACAGATTCAGAAATTAGAAGCTAAACTTGATTTA CCCCTTTTTGAGAGAGAGCAAAAACAAGTGTGTTTTACTAGTACCGGAGA ATTAATATTAGATTATGCAGCACGAATTTTGGTGTTATGTGAAGAAGCTA ATAAATCTATTCTTTATTTAAAAGATATAAAACGAACTAAATTAATTATT GGTTCTAGCAATACTACAGGAACATACTTATTACCAAAAATTATTGGTCT ATTTTGTCGACGTTATGCATATGCTAATGTAAAATTAGAAATTAGTTCTA CTAACCGTACTTCTTGGAGCGTAGCAAATGGTCAAATTGATATCGGAATT GTTGGTGGATATATACCAAAGGAATTACATCAATCGTTACAAATTAAAAA ATACGTAAATGATGAAATAGGCTTAATTTTACCAAAATTACATAAGCTAG GTCGATTAAATAGCATTTCAAAACATGATGTATATGACTTAAAATTTATA ACTTTAAAAACCCATTCCTTATCGAGGAAAGTGATGGATCGCATTTTGAA CGAAAATAAAATTGAAAGTAGTCGATTAAGGATAGAGCCTGAACTT
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Coding sequence (CDS) from alignment at H-elongata_contig205699:3..698-

>mRNA_H-elongata_contig205699.5873.1 ID=mRNA_H-elongata_contig205699.5873.1|Name=mRNA_H-elongata_contig205699.5873.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig205699:3..698- (Himanthalia elongata Himel1 dioecious)
ATGAGATATTTTCCATTCAATTTGGAGCAATTAAGAATTCTTCGAGTAAT
AGAAAATGAAAAAAGTCTTAAACAAGCTGCAAAAAAATTATATATTTCGC
AACCAGCTATTAGTTTACAGATTCAGAAATTAGAAGCTAAACTTGATTTA
CCCCTTTTTGAGAGAGAGCAAAAACAAGTGTGTTTTACTAGTACCGGAGA
ATTAATATTAGATTATGCAGCACGAATTTTGGTGTTATGTGAAGAAGCTA
ATAAATCTATTCTTTATTTAAAAGATATAAAACGAACTAAATTAATTATT
GGTTCTAGCAATACTACAGGAACATACTTATTACCAAAAATTATTGGTCT
ATTTTGTCGACGTTATGCATATGCTAATGTAAAATTAGAAATTAGTTCTA
CTAACCGTACTTCTTGGAGCGTAGCAAATGGTCAAATTGATATCGGAATT
GTTGGTGGATATATACCAAAGGAATTACATCAATCGTTACAAATTAAAAA
ATACGTAAATGATGAAATAGGCTTAATTTTACCAAAATTACATAAGCTAG
GTCGATTAAATAGCATTTCAAAACATGATGTATATGACTTAAAATTTATA
ACTTTAAAAACCCATTCCTTATCGAGGAAAGTGATGGATCGCATTTTGAA
CGAAAATAAAATTGAAAGTAGTCGATTAAGGATAGAGCCTGAACTTATGA
GATATTTTCCATTCAATTTGGAGCAATTAAGAATTCTTCGAGTAATAGAA
AATGAAAAAAGTCTTAAACAAGCTGCAAAAAAATTATATATTTCGCAACC
AGCTATTAGTTTACAGATTCAGAAATTAGAAGCTAAACTTGATTTACCCC
TTTTTGAGAGAGAGCAAAAACAAGTGTGTTTTACTAGTACCGGAGAATTA
ATATTAGATTATGCAGCACGAATTTTGGTGTTATGTGAAGAAGCTAATAA
ATCTATTCTTTATTTAAAAGATATAAAACGAACTAAATTAATTATTGGTT
CTAGCAATACTACAGGAACATACTTATTACCAAAAATTATTGGTCTATTT
TGTCGACGTTATGCATATGCTAATGTAAAATTAGAAATTAGTTCTACTAA
CCGTACTTCTTGGAGCGTAGCAAATGGTCAAATTGATATCGGAATTGTTG
GTGGATATATACCAAAGGAATTACATCAATCGTTACAAATTAAAAAATAC
GTAAATGATGAAATAGGCTTAATTTTACCAAAATTACATAAGCTAGGTCG
ATTAAATAGCATTTCAAAACATGATGTATATGACTTAAAATTTATAACTT
TAAAAACCCATTCCTTATCGAGGAAAGTGATGGATCGCATTTTGAACGAA
AATAAAATTGAAAGTAGTCGATTAAGGATAGAGCCTGAACTT
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