mRNA_H-elongata_contig20530.5854.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20530.5854.1
Unique NamemRNA_H-elongata_contig20530.5854.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: D8LQV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV3_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.700e-62
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 3 
Query:  144 SMTIGNVTLAEDELLDGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            S+TIG+VTL+E+EL DGFSA  IFA PGSRG       XXXX IDF VEEVALDTRITRNIPMAFPFASAAM TVTESKMAIAMALQGCIGVLH NC P EQVKLV++VKGYENGFI +PAVMSP+CTV DL++LK ERNIS
Sbjct:    3 SVTIGDVTLSEEELQDGFSAETIFATPGSRGXXXXXXXXXXXXIDFGVEEVALDTRITRNIPMAFPFASAAMDTVTESKMAIAMALQGCIGVLHGNCPPLEQVKLVQRVKGYENGFISNPAVMSPTCTVADLDDLKAERNIS 144
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A835ZPD2_9STRA (IMP dehydrogenase/GMP reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPD2_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.380e-51
Identity = 90/138 (65.22%), Postives = 108/138 (78.26%), Query Frame = 3 
Query:  156 GNVTLAEDELLDGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            G V++ E +L+DG+SA E+F  PGSRG+TFDD+I     IDF VE+V L+TR+TRNI +AFPFAS+ M TVTESKMAIAMAL+GCIG +H +CS E+QV LVKKVK YENGFI  PAVMSP   V  L+ LK ERNIS
Sbjct:    9 GGVSVTEADLVDGYSAEEVFGTPGSRGFTFDDMIALPGQIDFGVEQVELNTRLTRNIKLAFPFASSPMDTVTESKMAIAMALEGCIGFIHCHCSVEQQVGLVKKVKSYENGFITEPAVMSPDALVSALDALKAERNIS 146
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A835ZCF6_9STRA (IMP dehydrogenase/GMP reductase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF6_9STRA)

HSP 1 Score: 172 bits (436), Expect = 9.090e-48
Identity = 89/146 (60.96%), Postives = 108/146 (73.97%), Query Frame = 3 
Query:  135 ATMSMTIGNVTLAEDELLDGFSASEIFAVPG-SRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            A    T G VT+ E++L+DG+SA  IF+    +RG+TFDD+I     IDF VE+V L+T++TRNI ++FPFAS+ M TVTESKMAIAMALQGCIG +H NCS E QV+ VKKVK YENGFI  PAVMSP   V  L+ LK ERNIS
Sbjct:    2 APQEYTHGGVTVTEEDLVDGYSAEMIFSAGAMNRGFTFDDMIALPGQIDFGVEQVDLNTKLTRNIKLSFPFASSPMDTVTESKMAIAMALQGCIGFIHCNCSAERQVEQVKKVKSYENGFITEPAVMSPDALVSALDALKAERNIS 147
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A7S2D405_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D405_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.630e-40
Identity = 71/127 (55.91%), Postives = 92/127 (72.44%), Query Frame = 3 
Query:  189 DGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            DGFSA ++FA PGSRGYTFDD+I    SIDF V++V L TRIT+ + +  PF S+ M TVTE KMAIAMALQG IG +H     E+QV +V+ VK +ENGFI++P  MSP+  V D++ LK E+ I+
Sbjct:    2 DGFSAEQVFASPGSRGYTFDDLIVLPGSIDFGVDDVNLTTRITKKLCLNMPFCSSPMDTVTEEKMAIAMALQGGIGFIHCRSKIEDQVAMVRDVKRFENGFINNPVCMSPTDLVSDMDALKDEKGIT 128
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A482S6T9_9ARCH (IMPDH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6T9_9ARCH)

HSP 1 Score: 135 bits (339), Expect = 8.990e-36
Identity = 68/137 (49.64%), Postives = 92/137 (67.15%), Query Frame = 3 
Query:  159 NVTLAEDELLDGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
             + ++E+EL DG+SA +IF      G TFDD+I    +IDF V++V L +++T+NI +  P  S  M TVTE +MAI MAL G +G +H NC+ EEQV +V KVK YENGFI  PAV+ P+ TV DL+ L+  R IS
Sbjct:   68 GIVISEEELQDGYSAEDIFTQSECIGITFDDLIALPGAIDFGVQDVDLTSKLTKNITLNTPLCSTPMDTVTEHEMAIGMALNGSVGFIHCNCTIEEQVAMVSKVKQYENGFILDPAVLPPTATVRDLDTLRKARKIS 204
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A6V1RUF0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUF0_HETAK)

HSP 1 Score: 138 bits (347), Expect = 4.860e-35
Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 3 
Query:  159 NVTLAEDELLDGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            NVT++E+EL DG+ A  IF+ PGS G TFDD+I     I F V EV L++++++NI ++ PF S+ M TVT +KMAI MAL G +G++H +C  EEQVK+V+ VK YENGFI  P  ++P  T+ DL+ L+  + IS
Sbjct:    6 NVTISEEELEDGYPAESIFSNPGSMGITFDDLIVLPGEITFGVHEVDLNSKVSKNISVSSPFVSSPMDTVTGTKMAIGMALNGGLGIVHYSCPLEEQVKMVRDVKRYENGFILEPYCLAPDATIEDLDALRDTKGIS 142
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A7S2Y056_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y056_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.500e-34
Identity = 68/134 (50.75%), Postives = 96/134 (71.64%), Query Frame = 3 
Query:  168 LAEDELLDGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            ++++EL DGF+ S+IF+ PGS+G TFDD+I    +I F VEEV L +++TRN+ +  PF S+ M TVT  KMAIAMALQG +GV+H+NC+ EEQ K+V+KVK YENGFI     + P   + +L+EL   + I+
Sbjct:    9 ISDEELSDGFAISQIFSAPGSQGITFDDLIMLPGAITFGVEEVDLTSKVTRNVVVKSPFVSSPMDTVTGHKMAIAMALQGGVGVIHNNCTIEEQCKMVRKVKRYENGFILEAFCLGPDDELSNLDELNEAKKIT 142
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A7S2RJY9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJY9_9STRA)

HSP 1 Score: 135 bits (340), Expect = 6.610e-34
Identity = 68/127 (53.54%), Postives = 90/127 (70.87%), Query Frame = 3 
Query:  189 DGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            DG+SA EIFA PGSRGYTFDD+I    +IDF V++V+L++RITRNI +  PF S+ M TVTE+ MA+ MALQG +G+LH +C  E QV +V+ VK +ENGFI +P  M     + DL+ L  +  IS
Sbjct:   52 DGYSAKEIFASPGSRGYTFDDLICLPGAIDFGVDDVSLESRITRNIRIHSPFCSSPMDTVTEADMAVGMALQGGVGILHCHCEIEAQVAMVEHVKRFENGFIANPFCMRSDQPIQDLDTLSRDHGIS 178
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A0L0D2C3_THETB (Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2C3_THETB)

HSP 1 Score: 134 bits (336), Expect = 2.110e-33
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 3 
Query:  144 SMTIGNVTLAEDELLDGFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            +M +  + +  DE +DGFSA E+F      GYT++D+I     I F VEEV+++ +++RNI ++ P  S+ M TVTE++MAI MALQG IG+LHSN S EEQV +VK VK ++NGFI  P  + P  T+ D+ E+K  R  +
Sbjct:   23 AMNMDKIDIESDEWVDGFSAHELFVKNRGTGYTYEDIILMPGHIGFGVEEVSIEAQLSRNITLSAPLVSSPMDTVTEARMAIGMALQGGIGILHSNNSVEEQVAMVKAVKRFKNGFITDPVCLKPDATIRDVLEIKAARGFT 164
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BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Match: A0A258G975_9BACT (IMPDH domain-containing protein (Fragment) n=1 Tax=Candidatus Saccharibacteria bacterium 32-49-12 TaxID=1970479 RepID=A0A258G975_9BACT)

HSP 1 Score: 125 bits (314), Expect = 4.400e-33
Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 3 
Query:  192 GFSASEIFAVPGSRGYTFDDVIXXXXSIDFPVEEVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSPEEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS 569
            GF A +IF+     G TFDD+I     IDF VE+  L +++TRNI + FP  S+ M TVTE  MAI MAL G IG++H+NC  + QV +V+KVK YENGFI +PAV+SP   V DL+ L+ ER IS
Sbjct:   12 GFLAQDIFSNSECLGITFDDLITLPGEIDFSVEDCDLRSKLTRNIQLNFPLCSSPMDTVTEVSMAIGMALNGGIGIIHANCDVDTQVAMVEKVKMYENGFILNPAVLSPQDIVSDLDILRKERKIS 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20530.5854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV3_ECTSI1.700e-6278.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPD2_9STRA1.380e-5165.22IMP dehydrogenase/GMP reductase n=1 Tax=Tribonema ... [more]
A0A835ZCF6_9STRA9.090e-4860.96IMP dehydrogenase/GMP reductase (Fragment) n=1 Tax... [more]
A0A7S2D405_9STRA8.630e-4055.91Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A482S6T9_9ARCH8.990e-3649.64IMPDH domain-containing protein n=1 Tax=archaeon T... [more]
A0A6V1RUF0_HETAK4.860e-3549.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y056_9STRA1.500e-3450.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RJY9_9STRA6.610e-3453.54Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A0L0D2C3_THETB2.110e-3345.77Inosine-5'-monophosphate dehydrogenase n=1 Tax=The... [more]
A0A258G975_9BACT4.400e-3352.38IMPDH domain-containing protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20530contigH-elongata_contig20530:1148..4453 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score211.8
Seed ortholog evalue2e-52
Seed eggNOG ortholog2880.D8LQV3
Preferred nameIMPDH2
KEGG rclassRC00143,RC02207
KEGG koko:K00088
KEGG ReactionR01130,R08240
KEGG Pathwayko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110
KEGG ModuleM00050
GOsGO:0000166,GO:0000323,GO:0000785,GO:0000902,GO:0000904,GO:0001654,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003723,GO:0003729,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007623,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009267,GO:0009409,GO:0009605,GO:0009607,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0009991,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0022008,GO:0022607,GO:0030030,GO:0030141,GO:0030154,GO:0030182,GO:0030447,GO:0031175,GO:0031347,GO:0031349,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032940,GO:0032943,GO:0032989,GO:0032990,GO:0033554,GO:0034097,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0035578,GO:0035690,GO:0035821,GO:0036094,GO:0036170,GO:0036180,GO:0036230,GO:0040007,GO:0040011,GO:0042119,GO:0042221,GO:0042278,GO:0042330,GO:0042451,GO:0042455,GO:0042493,GO:0042582,GO:0042594,GO:0043010,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043473,GO:0043933,GO:0044003,GO:0044085,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044416,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0046903,GO:0048066,GO:0048468,GO:0048511,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052251,GO:0052255,GO:0052509,GO:0052510,GO:0055086,GO:0055114,GO:0060041,GO:0060205,GO:0061564,GO:0065003,GO:0065007,GO:0070013,GO:0070661,GO:0070670,GO:0070887,GO:0071310,GO:0071345,GO:0071353,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0075136,GO:0080134,GO:0090407,GO:0097159,GO:0097485,GO:0097708,GO:0099503,GO:0101002,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813
EggNOG free text desc.IMP dehydrogenase activity
EggNOG OGsCOG0516@1,KOG2550@2759
Ec32 ortholog descriptionInosine-5'-monophosphate dehydrogenase
Ec32 orthologEc-24_002410.1
EC1.1.1.205
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size571
Cds size429
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20530.5854.1prot_H-elongata_contig20530.5854.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20530 1288..4453 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930150.2429929-UTR-H-elongata_contig20530:1147..12871622930150.2429929-UTR-H-elongata_contig20530:1147..1287Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20530 1148..1287 +
1691679300.198865-UTR-H-elongata_contig20530:1147..12871691679300.198865-UTR-H-elongata_contig20530:1147..1287Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20530 1148..1287 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930150.2586722-CDS-H-elongata_contig20530:1287..13811622930150.2586722-CDS-H-elongata_contig20530:1287..1381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 1288..1381 +
1691679300.2181435-CDS-H-elongata_contig20530:1287..13811691679300.2181435-CDS-H-elongata_contig20530:1287..1381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 1288..1381 +
1622930150.2706618-CDS-H-elongata_contig20530:1909..20071622930150.2706618-CDS-H-elongata_contig20530:1909..2007Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 1910..2007 +
1691679300.232171-CDS-H-elongata_contig20530:1909..20071691679300.232171-CDS-H-elongata_contig20530:1909..2007Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 1910..2007 +
1622930150.284279-CDS-H-elongata_contig20530:2890..29941622930150.284279-CDS-H-elongata_contig20530:2890..2994Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 2891..2994 +
1691679300.2494192-CDS-H-elongata_contig20530:2890..29941691679300.2494192-CDS-H-elongata_contig20530:2890..2994Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 2891..2994 +
1622930150.2988284-CDS-H-elongata_contig20530:4320..44531622930150.2988284-CDS-H-elongata_contig20530:4320..4453Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 4321..4453 +
1691679300.2643118-CDS-H-elongata_contig20530:4320..44531691679300.2643118-CDS-H-elongata_contig20530:4320..4453Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20530 4321..4453 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20530.5854.1

>prot_H-elongata_contig20530.5854.1 ID=prot_H-elongata_contig20530.5854.1|Name=mRNA_H-elongata_contig20530.5854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
MSMTIGNVTLAEDELLDGFSASEIFAVPGSRGYTFDDVIALPGSIDFPVE
EVALDTRITRNIPMAFPFASAAMHTVTESKMAIAMALQGCIGVLHSNCSP
EEQVKLVKKVKGYENGFIDSPAVMSPSCTVFDLEELKGERNIS
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mRNA from alignment at H-elongata_contig20530:1148..4453+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20530.5854.1 ID=mRNA_H-elongata_contig20530.5854.1|Name=mRNA_H-elongata_contig20530.5854.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3306bp|location=Sequence derived from alignment at H-elongata_contig20530:1148..4453+ (Himanthalia elongata Himel1 dioecious)
GGGGAGGGAATCCTGGAAGGAGCTTATAAAGTCAGCTGGAAAAGCGGAGA
CGCTCAATCGCACGCGGCTCGATATTTTGCTGGGAGGAGGCGTTTTTTGT
TGCTTTCTTTTGTTTGTTTGTTTTTGAAGGGTCGGCGACTATGTCGATGA
CCATCGGTAACGTGACCCTCGCGGAGGACGAGTTGCTGGACGGCTTCAGC
GCGTCCGAAATATTTGCTGTTCCGGGGTCGAGAGGTGAAACACACAAACA
GTGTCAATGATCCCCCCCTCCCCATTGGGAGGACCAATACGAGAACTGTA
GCATAAGTCATACGATGGCAGGGAAGGCCGGATTGCGTGGCAATTTGCAT
CGTAATAAATACACACACGCCTTCGACTTCTCCAAGGTGCTTTCCTTGCC
ATACCTTGCCTTGCGTTGCCTTCAGAAACCAATGCATAGCACCCGAGTAC
ACGGCCTAGCGGTTGGAGTGAGAGCACTTGAATGTCCTCGTTGCTTGAAT
AGAGGTTTGAAGGCACCACTGGTGGTAAGAGAGACGAAGGCAAGCATAGA
TATCGCTATACTTTTGACGGTGCGCGATAACTTCTCTGCTTTAACGTTGT
GTGTTGTCTCCGACACCATCACCCTCACCGTTGTGCTATTGGTTGGCGTT
AACGTACTTAACGCGTCGCCGTGGGTAGCATCTTTTAACCCCCCCCCCCC
CCTCCTCTCTTTCTCTTTCCCCACCCCCCCCACTTGGAACGCCTCTCACG
AACGAAAACCAGGCTACACGTTTGACGACGTGATCGCCCTGCCGGGGAGC
ATCGATTTCCCCGTGGAGGAGGTCGCACTGGATACGCGAATCACGCGCAA
CATCCCCATGGTGAGAGGGAGAGACTATGACGGAGAGAGAGCCTATGACA
GAGAGAGGGAGAGATTTTTAAAAGCTCCTCTTCTTCCTCACACAAAATAA
AATAGTGGTGTGCTGCCTTATTTAAGAACACACTTATGTTTTAGCTGTGG
AAAATATTTATTGCAAATATCTCTTACCAGGACGGGCTCAATATATTAAA
GTTTTCTTTGACAAAATTACTAGAATGTTAAACCACTCATTGGCTGTGGA
TTGTCATGCAATGGACGTATAACAATTCTCCCTTTCCGTATCATTTCATT
TCTCCCTTTTACATTATGTGTGTGGAGTGTTTATTGCATTTTTTCCACTT
CTTTTTATTTTTCTTGTTTCGACCTGGTGCGCAATTTTCCCCCTTCTCCC
TCTACTTGGGTAATATTTTTTATTTGATGTATCTAGTCATTCGACGGCAA
CATATCACATACCGCATGAGATGTGGGGAAAACACCGTCTGTCTTATTTA
TTCTAGCTGGCGGAAATCAAAGACGGGGCTTCGGTGGGTGGTGGCGATGG
ATGTGTCGAGGGTTTTGTCGCTTATAAAGGAAATATCATATTCTCCCGAT
GGAGCTATCATATTCTCCCGATGGCGCTATCATATTTTCCCGATGGCGCT
ATTATATTCTCCCGATGGAGCTATCATATTCTCCCGATGGGGCTGTCATA
TTCTCCTGATGGGGCTATTCAACGTGCTGTTGCTATTTCTACAATAATAA
TAGTTGTGGTCGATATATGGCGGGAGGCAAGCATCTTGCTACCCCCCCCC
CCTCCTTAGTGTCGCCTCATTATCTCTCCTCCTCCCACCACTCTTGACCA
AATGTTTCTGTTACCAAAATGGTTTTGGTGGTTGGTTCGGAAGGCGTTCC
CGTTCGCGTCGGCGGCGATGCACACGGTCACAGAGAGCAAGATGGCCATC
GCCATGGCGCTGCAGGGGTGCATCGGGGTCTTGCACTCCAATTGCTCGTG
AGTCAGCTGTTGCTTCTTTTTCTGTATGTCTCCCTCTCTCACATACATAC
ACACGGTGTGAATGTGTGTATACACCACGTGAAAACCTTAACCTCGCACC
AGAAAACAACATCCATTTATGGTTGCTGATGCTGATTGGTCAGTCTCGGT
CGTTAGAGAGATCGACGACTTCTTGCTCCTGCTGTGAAAGCGGGGGTCAC
CAATGTCTTTGAAACCTCGTACAAGCCATCCCAGTATGGAACTCCCTCGG
TCAACTCCGGTGTTTGGGCTATGGACTAGTAAGGAGGGTTCGGGGGCCAA
AAACCAAACAAAACCCTTGCGAAACCAGCTGCCGCCGCCGCCGCCGTCGG
ATATTGAAATATTTCCCTCCCTCCCCAAAAAATCATCGTAAAAGGCTACA
CAGCGGGGGGGCGCCACCCCACAGCAGCGTCGGTTACATTTTTTTTCTAT
TATATTTTGCGCGCCGTCGCTCGACCAATCAGACCACGGGCTGCGAGGTT
TCGCCTTTCAGGCTGTTGTATTTTGTTATGCAAAGGCAGTAATTAATGTA
CACAATTCGAACCTGACGATATTAAATAGGTTGGTCCCCTGGACTGCACC
GCACCTCGCGTGGTGTTAAAAGAAGATGTGTAGATGTTCGGAAGGTTTGA
ATGATTTCATATGTTTTTTTTTTTTCAATAACAAAATATTTTTATCCCTA
TTCATAGCACTCCGGGAGGGTGAGGTTGTTGGGGGGGGGGGCGAAGTAGC
CATTCGTTGAGCGGCGCACCTCCGTTACGAACAAAGAGTTCTTGGGAGTT
AGGACGCAGAGAACATCAATAACTCTAATATCATTACCATCGCCCAGGAT
ATAGGAGAAGAAAGAAAAATAAACAATCGAGACCCTAATAGAGCTCGATC
TAGAAAACAAAGATCGGCGAAGACCAGAATGAACAAACTCCCACAGGGTA
TATATGTGACTATTTCTCCTATACAGTACATCACATTACACTATCCCTCC
AGCAATATCGACATGTCACGATGCATTCGCTTTTTTTTGTCGAATATATG
GATGGATTTGTTTTCGGGAAGGCGAGAGGAGAAGGTAAAGGTGGACAGGA
GGCCAGCGGACAATCGTGGCCAACCTATCTCTCTCTTCATCCGTCTCTCT
TTCTGTCTCTCTTTACCCGCGTGCTTGCCCTTGCCCTTTTGCCCTTGCTC
TGCTGAAATAAGTTAACATTTTTTATTTTATTTTTATTATCATTGCTGTG
TTTCTTGTCTTTTTTTATGCTGATGTCATGTCTGTAATGTGATGTCATGT
AATGTGGCGTAATAAATTGACAGTCCCGAGGAGCAGGTGAAGCTGGTGAA
AAAGGTGAAGGGGTACGAGAACGGTTTCATCGACAGCCCCGCGGTCATGT
CGCCCTCGTGCACGGTGTTCGATCTGGAGGAGCTCAAGGGAGAGCGAAAT
ATCTCG
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Coding sequence (CDS) from alignment at H-elongata_contig20530:1148..4453+

>mRNA_H-elongata_contig20530.5854.1 ID=mRNA_H-elongata_contig20530.5854.1|Name=mRNA_H-elongata_contig20530.5854.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at H-elongata_contig20530:1148..4453+ (Himanthalia elongata Himel1 dioecious)
ATGTCGATGACCATCGGTAACGTGACCCTCGCGGAGGACGAGTTGCTGGA
CGGCTTCAGCGCGTCCGAAATATTTGCTGTTCCGGGGTCGAGAGATGTCG
ATGACCATCGGTAACGTGACCCTCGCGGAGGACGAGTTGCTGGACGGCTT
CAGCGCGTCCGAAATATTTGCTGTTCCGGGGTCGAGAGGCTACACGTTTG
ACGACGTGATCGCCCTGCCGGGGAGCATCGATTTCCCCGTGGAGGAGGTC
GCACTGGATACGCGAATCACGCGCAACATCCCCATGGCTACACGTTTGAC
GACGTGATCGCCCTGCCGGGGAGCATCGATTTCCCCGTGGAGGAGGTCGC
ACTGGATACGCGAATCACGCGCAACATCCCCATGGCGTTCCCGTTCGCGT
CGGCGGCGATGCACACGGTCACAGAGAGCAAGATGGCCATCGCCATGGCG
CTGCAGGGGTGCATCGGGGTCTTGCACTCCAATTGCTCGCGTTCCCGTTC
GCGTCGGCGGCGATGCACACGGTCACAGAGAGCAAGATGGCCATCGCCAT
GGCGCTGCAGGGGTGCATCGGGGTCTTGCACTCCAATTGCTCTCCCGAGG
AGCAGGTGAAGCTGGTGAAAAAGGTGAAGGGGTACGAGAACGGTTTCATC
GACAGCCCCGCGGTCATGTCGCCCTCGTGCACGGTGTTCGATCTGGAGGA
GCTCAAGGGAGAGCGAAATATCTCGTCCCGAGGAGCAGGTGAAGCTGGTG
AAAAAGGTGAAGGGGTACGAGAACGGTTTCATCGACAGCCCCGCGGTCAT
GTCGCCCTCGTGCACGGTGTTCGATCTGGAGGAGCTCAAGGGAGAGCGAA
ATATCTCG
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