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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 2451 |
| Cds size | 2451 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930144.9118276-CDS-H-elongata_contig20369:293..598 | 1622930144.9118276-CDS-H-elongata_contig20369:293..598 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 294..598 + |
| 1691679298.151748-CDS-H-elongata_contig20369:293..598 | 1691679298.151748-CDS-H-elongata_contig20369:293..598 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 294..598 + |
| 1622930144.9258544-CDS-H-elongata_contig20369:898..1649 | 1622930144.9258544-CDS-H-elongata_contig20369:898..1649 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 899..1649 + |
| 1691679298.158814-CDS-H-elongata_contig20369:898..1649 | 1691679298.158814-CDS-H-elongata_contig20369:898..1649 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 899..1649 + |
| 1622930144.9401515-CDS-H-elongata_contig20369:1854..2921 | 1622930144.9401515-CDS-H-elongata_contig20369:1854..2921 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 1855..2921 + |
| 1691679298.170382-CDS-H-elongata_contig20369:1854..2921 | 1691679298.170382-CDS-H-elongata_contig20369:1854..2921 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 1855..2921 + |
| 1622930144.9591026-CDS-H-elongata_contig20369:3192..3333 | 1622930144.9591026-CDS-H-elongata_contig20369:3192..3333 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 3193..3333 + |
| 1691679298.185221-CDS-H-elongata_contig20369:3192..3333 | 1691679298.185221-CDS-H-elongata_contig20369:3192..3333 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 3193..3333 + |
| 1622930144.9708536-CDS-H-elongata_contig20369:3475..3662 | 1622930144.9708536-CDS-H-elongata_contig20369:3475..3662 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 3476..3662 + |
| 1691679298.1941566-CDS-H-elongata_contig20369:3475..3662 | 1691679298.1941566-CDS-H-elongata_contig20369:3475..3662 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20369 3476..3662 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20369.5794.1 >prot_H-elongata_contig20369.5794.1 ID=prot_H-elongata_contig20369.5794.1|Name=mRNA_H-elongata_contig20369.5794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=817bp
IQGFDLDRHTVHLGRTDPEGFIVQITEKSVNVLEPEELRRIGRWHPSPSL PRFKVQFGASAGSQAVVACEGTIVILTIEATYIAGGIRRVGEITVREVRR STDTTLALEYASCAPFPLCNHSHLMYIVSFALLSVVVPLNLSTDAQIHTE NVGTAQSVLIAVSFWDHPSVAVLSWIPPLARDGFNSLTGTRDGGQLKEIA MWCPMCEEGGSAAVDACGVPPAAAERVDVVRALAFAWFHKERRQLHMVAG TSDGKIVVAAWNRNFENNRIQKRENMEMIGTEKIVTTSIFQVGRGPVRLD VFQRSPIDQTDVVGERNESVFVNSDDMDAVLQYCPDGERSSNSLPGIWRC TQVCKAGFLPRLSVVSLPHWKLCTNGDTVGEYFAWLMTSENPHHNYFSLE SCLCSSRRFIINNSDTNGKSHVNDDTPFGGMMLCFGKLDWEPRGHFQKKP LLQTPTHLLYVPTNRSIVVACHNYPQGKTEGSFPGHDAEVMPPPLHSLSS SLRVFDADTLKERSGGPLRFLPGVRVTGLATLGLKEPRNVPAWTTTRDDR GSEGADIPSTAVGGDVIAVACCYEEHEGHRQDESEDTAQMNAASIADVDD TNTLKTVVAAFEVVAYNDYGAEEYNTSRQTTSAGRDDASRTYAIGRRADY NKISNDFRGCTSLEPLAASTEMTGACFSLKLLDGCFVAAALDEMVIVLGW SGKNGGLRPDQLTPPLRLDTAASYHTSFGGCVTALDTCGTFIAVAEFLHS VSVLSFDHASRTLSVVASHSRNNLMVPALALYVSPCGGTEGCPNMNHILT VAVADRATKTVAVLSCS back to topmRNA from alignment at H-elongata_contig20369:294..3662+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig20369.5794.1 ID=mRNA_H-elongata_contig20369.5794.1|Name=mRNA_H-elongata_contig20369.5794.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3369bp|location=Sequence derived from alignment at H-elongata_contig20369:294..3662+ (Himanthalia elongata Himel1 dioecious) ATTCAGGGATTTGATCTTGATCGACACACTGTACACCTGGGGAGAACAGA
TCCAGAGGGTTTTATCGTCCAGATCACCGAAAAGTCCGTTAATGTTCTCG
AACCGGAGGAATTGCGCCGCATCGGTCGTTGGCATCCATCGCCCTCTCTC
CCTCGCTTCAAAGTACAGTTTGGAGCGTCGGCGGGATCACAAGCTGTCGT
CGCTTGCGAAGGCACCATTGTAATTCTCACTATCGAGGCAACGTACATTG
CGGGAGGAATTCGTCGAGTTGGGGAAATTACTGTCAGGGAAGTGAGGCGA
TCAACGTTCGACAACCACGCAAGTGCGTTAGCGATGAGCGCGGTTGATGG
CGCATGTGAGGGCACAGGTACCGGAAGATACCGCATGTCAAGGGCTACAG
CCTAAAGACTAACGCAGAACCCTTTGAATTATTTCTTCCCTGCTGGCCAT
CATCGACCGCTTTCGTCTGTAGTTTGAAAACACTAAGTGGATAAGCTCTT
TTTTTGCGGAATGCGCATCCAGCAGCTCATGCAAGAACCAGCGACTTCAA
CGATCGTTGCTATTGGGGAAGTGCAGCTAACTATACGATATGGACATCTT
AGTAGAGATACGACTTTGGCCTTGGAGTATGCCTCCTGTGCACCCTTCCC
CCTATGTAATCATTCCCATCTTATGTATATTGTGTCCTTTGCTCTACTCT
CCGTGGTTGTGCCATTGAATCTTTCTACCGACGCACAAATTCACACGGAA
AATGTAGGCACAGCCCAATCGGTCCTGATCGCGGTGTCGTTTTGGGACCA
TCCGTCCGTCGCCGTCCTCTCATGGATCCCGCCACTGGCGAGGGATGGGT
TTAACTCGCTTACGGGAACGCGTGATGGGGGTCAACTTAAAGAGATCGCA
ATGTGGTGTCCAATGTGCGAGGAGGGGGGGTCAGCGGCCGTCGATGCATG
TGGCGTCCCACCAGCCGCAGCGGAAAGGGTGGACGTTGTTCGCGCGCTAG
CATTTGCGTGGTTCCACAAGGAGCGCAGACAGCTACATATGGTGGCGGGG
ACATCAGACGGGAAAATTGTCGTGGCAGCATGGAACCGTAATTTTGAGAA
TAATCGGATACAGAAGAGGGAAAATATGGAAATGATTGGAACCGAAAAAA
TAGTCACGACATCTATATTCCAAGTCGGCCGAGGGCCGGTGCGATTAGAC
GTCTTCCAGCGGAGTCCAATCGACCAGACCGATGTCGTTGGAGAGAGAAA
TGAAAGCGTGTTTGTCAACAGCGATGATATGGATGCGGTGCTTCAATATT
GCCCGGACGGTGAGAGGTCCAGCAACAGCTTGCCGGGAATCTGGAGGTGC
ACGCAGGTCTGTGGTATCACAACACCTAATAATGTTGACTGACATCCGGC
AGTTTGAAAATCGACGATAACACTGGCATCCCATTCTTTTTCGTCTAAAA
TCGATCGAAACGTTCTCCATTTCTTATTATCCCCCACTACCCCTTTCTCG
ATGATCTATATTTCTCCACACCCGATAATTCCTGCTTGCCTCGAAACAAA
TCGAAGAATAGGTCTGCAAAGCTGGCTTTCTCCCTCGACTAAGCGTTGTC
AGTTTACCACACTGGAAGCTTTGTACGAACGGCGATACCGTGGGTGAATA
TTTTGCTTGGCTAATGACCTCCGAAAACCCGCATCATAACTATTTCAGTT
TGGAGTCATGCCTTTGCAGTAGCCGGCGTTTCATCATCAACAACAGCGAT
ACTAATGGTAAAAGCCATGTAAACGACGACACGCCATTTGGGGGGATGAT
GTTATGTTTTGGCAAGCTTGATTGGGAGCCGCGCGGACACTTCCAGAAGA
AGCCCCTCCTACAAACGCCCACACATCTTTTGTATGTCCCTACCAACCGG
TCCATCGTCGTGGCTTGTCACAATTACCCTCAAGGTAAGACCGAGGGTAG
TTTTCCCGGCCATGACGCGGAGGTGATGCCGCCGCCTTTGCATAGCCTTT
CGTCAAGTCTTCGTGTGTTCGATGCCGATACACTGAAAGAAAGATCTGGC
GGTCCTTTACGCTTTCTTCCGGGTGTGAGGGTGACCGGTTTAGCGACCCT
GGGTCTTAAGGAGCCACGGAACGTGCCAGCGTGGACGACGACTAGGGACG
ATCGGGGTAGCGAAGGTGCAGACATACCCTCCACCGCGGTGGGGGGTGAT
GTGATAGCCGTAGCCTGCTGCTACGAAGAGCACGAGGGTCACCGACAAGA
TGAAAGCGAGGATACCGCCCAGATGAATGCAGCATCCATAGCTGATGTTG
ACGATACCAATACACTGAAAACAGTAGTCGCGGCATTCGAGGTGGTAGCT
TACAATGATTATGGTGCTGAGGAATACAATACCAGCCGACAGACTACCAG
TGCAGGGCGCGACGACGCTTCAAGAACGTACGCCATCGGGAGACGCGCTG
ACTATAATAAAATTTCCAATGATTTTAGGGGTTGTACGTCTTTAGAGCCA
TTAGCAGCATCGACCGAGATGACGGGTGCTTGTTTTAGCCTCAAGCTGTT
GGACGGATGCTTCGTTGCTGCGGCTCTTGATGAAATGGTTATTGTACTTG
GGTGGAGCGGCAAAAACGGCGGCCTAAGGTGACATCGATTCCACTTCGCT
CACAAAAGTTCGACTACCACGTAGCTTTACGATCGGAGCCACGAGCCGAA
AGTAGCTTTTCTAGGAGATAAACGTTATACCCTACCATAACTCTTCGGCT
GTGTATAGCCCTCCTGGTCGATAATGAACGGCCTCGCGGCGCGCGAACGA
AATAGCGATGTCAAGCATGCGTTTTACTACCCTTTTTAGTACCAGTATTA
CTTTCCGTTACCCCTAAAGTAATCCGGCTCCTCCACCCCCATGGTGCAGA
CCTGACCAACTCACTCCGCCGCTTCGACTGGACACGGCAGCCAGTTATCA
CACCTCGTTCGGTGGGTGCGTGACGGCCCTCGACACGTGTGGGACATTTA
TCGCCGTCGCCGAATTCCTGCATTCGGTTTCAGTGTTGAGGTAAGACGCG
ACTGAAGGATTTAGACATTTTTTTTGTCAAGGCTCCGTTGTGCTCGAAAC
AATCTACAAGGTTCATGGCTCAATTCTACTAACCGCTCCCGACAACCTTG
ACCTGATTCCCTTTCCCTGTGCATTCTGACAGTTTTGATCATGCTTCGAG
AACACTGTCGGTCGTTGCTTCTCACTCCCGGAATAACCTCATGGTACCGG
CTCTTGCCCTGTACGTGAGTCCGTGCGGTGGTACAGAAGGATGCCCCAAT
ATGAATCACATTCTTACTGTAGCGGTAGCGGACAGAGCAACAAAAACGGT
CGCCGTATTATCTTGCTCC back to topCoding sequence (CDS) from alignment at H-elongata_contig20369:294..3662+ >mRNA_H-elongata_contig20369.5794.1 ID=mRNA_H-elongata_contig20369.5794.1|Name=mRNA_H-elongata_contig20369.5794.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4902bp|location=Sequence derived from alignment at H-elongata_contig20369:294..3662+ (Himanthalia elongata Himel1 dioecious) ATTCAGGGATTTGATCTTGATCGACACACTGTACACCTGGGGAGAACAGA TCCAGAGGGTTTTATCGTCCAGATCACCGAAAAGTCCGTTAATGTTCTCG AACCGGAGGAATTGCGCCGCATCGGTCGTTGGCATCCATCGCCCTCTCTC CCTCGCTTCAAAGTACAGTTTGGAGCGTCGGCGGGATCACAAGCTGTCGT CGCTTGCGAAGGCACCATTGTAATTCTCACTATCGAGGCAACGTACATTG CGGGAGGAATTCGTCGAGTTGGGGAAATTACTGTCAGGGAAGTGAGGCGA TCAACATTCAGGGATTTGATCTTGATCGACACACTGTACACCTGGGGAGA ACAGATCCAGAGGGTTTTATCGTCCAGATCACCGAAAAGTCCGTTAATGT TCTCGAACCGGAGGAATTGCGCCGCATCGGTCGTTGGCATCCATCGCCCT CTCTCCCTCGCTTCAAAGTACAGTTTGGAGCGTCGGCGGGATCACAAGCT GTCGTCGCTTGCGAAGGCACCATTGTAATTCTCACTATCGAGGCAACGTA CATTGCGGGAGGAATTCGTCGAGTTGGGGAAATTACTGTCAGGGAAGTGA GGCGATCAACAGATACGACTTTGGCCTTGGAGTATGCCTCCTGTGCACCC TTCCCCCTATGTAATCATTCCCATCTTATGTATATTGTGTCCTTTGCTCT ACTCTCCGTGGTTGTGCCATTGAATCTTTCTACCGACGCACAAATTCACA CGGAAAATGTAGGCACAGCCCAATCGGTCCTGATCGCGGTGTCGTTTTGG GACCATCCGTCCGTCGCCGTCCTCTCATGGATCCCGCCACTGGCGAGGGA TGGGTTTAACTCGCTTACGGGAACGCGTGATGGGGGTCAACTTAAAGAGA TCGCAATGTGGTGTCCAATGTGCGAGGAGGGGGGGTCAGCGGCCGTCGAT GCATGTGGCGTCCCACCAGCCGCAGCGGAAAGGGTGGACGTTGTTCGCGC GCTAGCATTTGCGTGGTTCCACAAGGAGCGCAGACAGCTACATATGGTGG CGGGGACATCAGACGGGAAAATTGTCGTGGCAGCATGGAACCGTAATTTT GAGAATAATCGGATACAGAAGAGGGAAAATATGGAAATGATTGGAACCGA AAAAATAGTCACGACATCTATATTCCAAGTCGGCCGAGGGCCGGTGCGAT TAGACGTCTTCCAGCGGAGTCCAATCGACCAGACCGATGTCGTTGGAGAG AGAAATGAAAGCGTGTTTGTCAACAGCGATGATATGGATGCGGTGCTTCA ATATTGCCCGGACGGTGAGAGGTCCAGCAACAGCTTGCCGGGAATCTGGA GGTGCACGCAGAGATACGACTTTGGCCTTGGAGTATGCCTCCTGTGCACC CTTCCCCCTATGTAATCATTCCCATCTTATGTATATTGTGTCCTTTGCTC TACTCTCCGTGGTTGTGCCATTGAATCTTTCTACCGACGCACAAATTCAC ACGGAAAATGTAGGCACAGCCCAATCGGTCCTGATCGCGGTGTCGTTTTG GGACCATCCGTCCGTCGCCGTCCTCTCATGGATCCCGCCACTGGCGAGGG ATGGGTTTAACTCGCTTACGGGAACGCGTGATGGGGGTCAACTTAAAGAG ATCGCAATGTGGTGTCCAATGTGCGAGGAGGGGGGGTCAGCGGCCGTCGA TGCATGTGGCGTCCCACCAGCCGCAGCGGAAAGGGTGGACGTTGTTCGCG CGCTAGCATTTGCGTGGTTCCACAAGGAGCGCAGACAGCTACATATGGTG GCGGGGACATCAGACGGGAAAATTGTCGTGGCAGCATGGAACCGTAATTT TGAGAATAATCGGATACAGAAGAGGGAAAATATGGAAATGATTGGAACCG AAAAAATAGTCACGACATCTATATTCCAAGTCGGCCGAGGGCCGGTGCGA TTAGACGTCTTCCAGCGGAGTCCAATCGACCAGACCGATGTCGTTGGAGA GAGAAATGAAAGCGTGTTTGTCAACAGCGATGATATGGATGCGGTGCTTC AATATTGCCCGGACGGTGAGAGGTCCAGCAACAGCTTGCCGGGAATCTGG AGGTGCACGCAGGTCTGCAAAGCTGGCTTTCTCCCTCGACTAAGCGTTGT CAGTTTACCACACTGGAAGCTTTGTACGAACGGCGATACCGTGGGTGAAT ATTTTGCTTGGCTAATGACCTCCGAAAACCCGCATCATAACTATTTCAGT TTGGAGTCATGCCTTTGCAGTAGCCGGCGTTTCATCATCAACAACAGCGA TACTAATGGTAAAAGCCATGTAAACGACGACACGCCATTTGGGGGGATGA TGTTATGTTTTGGCAAGCTTGATTGGGAGCCGCGCGGACACTTCCAGAAG AAGCCCCTCCTACAAACGCCCACACATCTTTTGTATGTCCCTACCAACCG GTCCATCGTCGTGGCTTGTCACAATTACCCTCAAGGTAAGACCGAGGGTA GTTTTCCCGGCCATGACGCGGAGGTGATGCCGCCGCCTTTGCATAGCCTT TCGTCAAGTCTTCGTGTGTTCGATGCCGATACACTGAAAGAAAGATCTGG CGGTCCTTTACGCTTTCTTCCGGGTGTGAGGGTGACCGGTTTAGCGACCC TGGGTCTTAAGGAGCCACGGAACGTGCCAGCGTGGACGACGACTAGGGAC GATCGGGGTAGCGAAGGTGCAGACATACCCTCCACCGCGGTGGGGGGTGA TGTGATAGCCGTAGCCTGCTGCTACGAAGAGCACGAGGGTCACCGACAAG ATGAAAGCGAGGATACCGCCCAGATGAATGCAGCATCCATAGCTGATGTT GACGATACCAATACACTGAAAACAGTAGTCGCGGCATTCGAGGTGGTAGC TTACAATGATTATGGTGCTGAGGAATACAATACCAGCCGACAGACTACCA GTGCAGGGCGCGACGACGCTTCAAGAACGTACGCCATCGGGAGACGCGCT GACTATAATAAAATTTCCAATGATTTTAGGGGTTGTACGTCTTTAGAGCC ATTAGCAGCATCGACCGAGATGACGGGTGCTTGTTTTAGCCTCAAGCTGT TGGACGGATGCTTCGTTGCTGCGGCTCTTGATGAAATGGTTATTGTACTT GGGTGGAGCGGCAAAAACGGCGGCCTAAGGTCTGCAAAGCTGGCTTTCTC CCTCGACTAAGCGTTGTCAGTTTACCACACTGGAAGCTTTGTACGAACGG CGATACCGTGGGTGAATATTTTGCTTGGCTAATGACCTCCGAAAACCCGC ATCATAACTATTTCAGTTTGGAGTCATGCCTTTGCAGTAGCCGGCGTTTC ATCATCAACAACAGCGATACTAATGGTAAAAGCCATGTAAACGACGACAC GCCATTTGGGGGGATGATGTTATGTTTTGGCAAGCTTGATTGGGAGCCGC GCGGACACTTCCAGAAGAAGCCCCTCCTACAAACGCCCACACATCTTTTG TATGTCCCTACCAACCGGTCCATCGTCGTGGCTTGTCACAATTACCCTCA AGGTAAGACCGAGGGTAGTTTTCCCGGCCATGACGCGGAGGTGATGCCGC CGCCTTTGCATAGCCTTTCGTCAAGTCTTCGTGTGTTCGATGCCGATACA CTGAAAGAAAGATCTGGCGGTCCTTTACGCTTTCTTCCGGGTGTGAGGGT GACCGGTTTAGCGACCCTGGGTCTTAAGGAGCCACGGAACGTGCCAGCGT GGACGACGACTAGGGACGATCGGGGTAGCGAAGGTGCAGACATACCCTCC ACCGCGGTGGGGGGTGATGTGATAGCCGTAGCCTGCTGCTACGAAGAGCA CGAGGGTCACCGACAAGATGAAAGCGAGGATACCGCCCAGATGAATGCAG CATCCATAGCTGATGTTGACGATACCAATACACTGAAAACAGTAGTCGCG GCATTCGAGGTGGTAGCTTACAATGATTATGGTGCTGAGGAATACAATAC CAGCCGACAGACTACCAGTGCAGGGCGCGACGACGCTTCAAGAACGTACG CCATCGGGAGACGCGCTGACTATAATAAAATTTCCAATGATTTTAGGGGT TGTACGTCTTTAGAGCCATTAGCAGCATCGACCGAGATGACGGGTGCTTG TTTTAGCCTCAAGCTGTTGGACGGATGCTTCGTTGCTGCGGCTCTTGATG AAATGGTTATTGTACTTGGGTGGAGCGGCAAAAACGGCGGCCTAAGACCT GACCAACTCACTCCGCCGCTTCGACTGGACACGGCAGCCAGTTATCACAC CTCGTTCGGTGGGTGCGTGACGGCCCTCGACACGTGTGGGACATTTATCG CCGTCGCCGAATTCCTGCATTCGGTTTCAGTGTTGAGACCTGACCAACTC ACTCCGCCGCTTCGACTGGACACGGCAGCCAGTTATCACACCTCGTTCGG TGGGTGCGTGACGGCCCTCGACACGTGTGGGACATTTATCGCCGTCGCCG AATTCCTGCATTCGGTTTCAGTGTTGAGTTTTGATCATGCTTCGAGAACA CTGTCGGTCGTTGCTTCTCACTCCCGGAATAACCTCATGGTACCGGCTCT TGCCCTGTACGTGAGTCCGTGCGGTGGTACAGAAGGATGCCCCAATATGA ATCACATTCTTACTGTAGCGGTAGCGGACAGAGCAACAAAAACGGTCGCC GTATTATCTTGCTCCTTTTGATCATGCTTCGAGAACACTGTCGGTCGTTG CTTCTCACTCCCGGAATAACCTCATGGTACCGGCTCTTGCCCTGTACGTG AGTCCGTGCGGTGGTACAGAAGGATGCCCCAATATGAATCACATTCTTAC TGTAGCGGTAGCGGACAGAGCAACAAAAACGGTCGCCGTATTATCTTGCT CC back to top
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