mRNA_H-elongata_contig203545.5786.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: D8LTQ6_ECTSI (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ6_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 3.580e-19 Identity = 43/60 (71.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 1 KAWKAFALSVTENTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQ 180
KAWKAF+ SVT+NT T++RL+ LT+ SFSRPAPF+ER+ AQ K++ LPVLPTTTIGSFPQ
Sbjct: 402 KAWKAFSASVTDNTNTAKRLAGLTEASFSRPAPFKERVAAQQKSLKLPVLPTTTIGSFPQ 461
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: METE_BACVZ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=132 Tax=Bacilli TaxID=91061 RepID=METE_BACVZ) HSP 1 Score: 67.0 bits (162), Expect = 1.880e-11 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 KAWKAFALSVTENTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQ 180
KA KAFA N+A E L+ LT++ FSRPA FEERL Q++++ LP+LPTTTIGSFPQ
Sbjct: 383 KALKAFATGA--NSAQKEELNQLTEKDFSRPASFEERLALQNESLGLPLLPTTTIGSFPQ 440
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: A0A1E4TE11_9ASCO (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TE11_9ASCO) HSP 1 Score: 64.7 bits (156), Expect = 1.230e-10 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 25 SVTENTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQVRK 189
S+T+N A ERL+ +TD SR +PF ERL AQ K +NLP+ PTTTIGSFPQ ++
Sbjct: 392 SITKNPAVRERLAKVTDADKSRKSPFPERLVAQKKNLNLPLFPTTTIGSFPQTKE 446
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: UPI00198129EE (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00198129EE) HSP 1 Score: 57.8 bits (138), Expect = 1.020e-9 Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 67 LTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQ 180
LT++ FSRPA FEERL Q++++ LP+LPTTTIGSFPQ
Sbjct: 4 LTEKDFSRPASFEERLALQNESLGLPLLPTTTIGSFPQ 41
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: UPI00077A5B1F (5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase n=2 Tax=Bacillus atrophaeus TaxID=1452 RepID=UPI00077A5B1F) HSP 1 Score: 62.0 bits (149), Expect = 1.100e-9 Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 37 NTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQ 180
N+ E L+ LT++ F RP PFEERL+ Q++++ LP+LPTTTIGSFPQ
Sbjct: 393 NSEQKEELNQLTEKDFKRPIPFEERLKIQNESLGLPLLPTTTIGSFPQ 440
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: METE_BACSU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=168 Tax=Bacteria TaxID=2 RepID=METE_BACSU) HSP 1 Score: 60.8 bits (146), Expect = 2.800e-9 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 37 NTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQ 180
N+ + L LTD+ F RP PFEERL Q++++ LP+LPTTTIGSFPQ
Sbjct: 393 NSEQKKELEQLTDKDFKRPIPFEERLALQNESLGLPLLPTTTIGSFPQ 440
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: A0A1R1QYW3_9BACI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=4 Tax=Bacillus TaxID=1386 RepID=A0A1R1QYW3_9BACI) HSP 1 Score: 60.8 bits (146), Expect = 2.800e-9 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 37 NTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQ 180
NTA +E LT+ F+RP FEERL+ Q++++ LPVLPTTTIGSFPQ
Sbjct: 393 NTAFAEERDKLTEEDFARPTAFEERLRIQNESLGLPVLPTTTIGSFPQ 440
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: A0A2E7K1T1_9RICK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E7K1T1_9RICK) HSP 1 Score: 60.5 bits (145), Expect = 3.830e-9 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 37 NTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQVRK 189
N A ERL+++ D+ +R APF ER++ Q +NLPVLPTTTIGSFPQ ++
Sbjct: 401 NKAVKERLASVDDKMLNRKAPFAERIKGQEANLNLPVLPTTTIGSFPQTKE 451
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: UPI001922FC84 (5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase n=1 Tax=unclassified Enterococcus TaxID=2608891 RepID=UPI001922FC84) HSP 1 Score: 59.7 bits (143), Expect = 7.150e-9 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 28 VTENTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQVR 186
V +N A +++L+ALT++ F R +EER Q Q +NLP+LPTTTIGSFPQ R
Sbjct: 379 VQKNEALADKLAALTEQDFHRQISYEERAQTQKIELNLPLLPTTTIGSFPQTR 431
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Match: A0A0H4QFL4_9LACO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Companilactobacillus ginsenosidimutans TaxID=1007676 RepID=A0A0H4QFL4_9LACO) HSP 1 Score: 59.3 bits (142), Expect = 9.780e-9 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 28 VTENTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLPTTTIGSFPQVRK 189
VTEN ER++AL D SF R E+R + Q K NLP+LPTTTIGSFPQ ++
Sbjct: 379 VTENPKVHERVAALNDDSFVRHPSLEQRAEIQKKEFNLPLLPTTTIGSFPQTKE 432 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig203545.5786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig203545.5786.1 >prot_H-elongata_contig203545.5786.1 ID=prot_H-elongata_contig203545.5786.1|Name=mRNA_H-elongata_contig203545.5786.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp KAWKAFALSVTENTATSERLSALTDRSFSRPAPFEERLQAQSKAMNLPVLback to top mRNA from alignment at H-elongata_contig203545:566..754- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig203545.5786.1 ID=mRNA_H-elongata_contig203545.5786.1|Name=mRNA_H-elongata_contig203545.5786.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=189bp|location=Sequence derived from alignment at H-elongata_contig203545:566..754- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig203545:566..754- >mRNA_H-elongata_contig203545.5786.1 ID=mRNA_H-elongata_contig203545.5786.1|Name=mRNA_H-elongata_contig203545.5786.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig203545:566..754- (Himanthalia elongata Himel1 dioecious)back to top |