mRNA_H-elongata_contig20329.5773.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: D8LRQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ9_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 1.860e-148 Identity = 261/447 (58.39%), Postives = 313/447 (70.02%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKGMKALLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTKATGKKSSSNLQVTQAATSSPGTTPFIRSRGRKRLPAGRDSFDDSSSHSAAPLLSVTSGGGVSCKGGXXGDIDRS-------QSKSPDGAEGSANVVGHSGGYPVRHRGYPKNGNDATGTADRDSGMAA----------GRGGRWARARSPQGDRQIQRSP-RRRMISPPVSGLG 1287
EYLVV IF+R+ GLF+T LQFFGYA CAA++RG+H++ RK+P+ TY GLGFLQA MQGLTN+SM+YLNYPAKVLFKSSRMVPIMCFGVVWQG++YS RD +VV IVTGLATFMNAETR+S S+TP SL+G+ CISLALVIDAA IN+QEE+MN Y SCQDELIMFSYLCGTVY+ +F+G+L G +FLH KG +A +AV L+ AG+LG SC ALTKRFGALHSAITTTARKA+TLMLSF F K F+ QHL+GA VF++GL+TK GK+S S+ Q ++A +SP TPFI+ RKRL D + S++ LS GG C G G + S QS SP EG A++ G S GYPVRHRG PK G A R G+ + RGG W R Q RSP R R+ SPPV+GLG
Sbjct: 356 EYLVVKIFERKFGLFMTFLQFFGYATCAALRRGVHRETVRKVPLRTYFGLGFLQAVMQGLTNVSMMYLNYPAKVLFKSSRMVPIMCFGVVWQGKRYSMRDCLVVCFIVTGLATFMNAETRSSAESDTPCSLLGILCISLALVIDAANINMQEEVMNGYASCQDELIMFSYLCGTVYVASYCVFSGELISGFMFLHEKGPRAFVAVMLYCGAGFLGGSCAVALTKRFGALHSAITTTARKAVTLMLSFAYF-QKAFTPQHLVGATVFMIGLMTKMFGKQSKSSAQTGKSAENSPAATPFIQPHHRKRL------SDAEAGQSSSAALSSGGSGGDPCSGDGYGVVRGSHAGTTCTQSPSPVRQEGPASIAGVSAGYPVRHRGNPKLGGSPA--AGRGGGIGSERXXXXXXXXXRGGHWVR----QKQLSPPRSPFRARIASPPVTGLG 789
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: W7UCB2_9STRA (Adenosine 3-phospho 5-phosphosulfate transporter 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCB2_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.530e-74 Identity = 135/274 (49.27%), Postives = 189/274 (68.98%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKGMKALLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTKA 822
EY+V+ +F+R LG+FLTL QF GY++ AA+ R +H R+IP Y L LQA MQGLTN+SM +LNYPAK+LFKSSR++P M G++ ++Y +DY+VV L+ GL F+ A+ + S + F +G+ I +AL +DAAI+NIQE + +YD+ DELI +SY G++ L I L + +L +G++FL G++A + +F S GY GV+CVAALTK+FGAL S +TTTARKALTL LSF +FP KP + H++G +FV GL KA
Sbjct: 169 EYMVIHVFERRLGIFLTLCQFSGYSSLAALHRLIHADTPRRIPFGYYILLASLQALMQGLTNLSMRWLNYPAKMLFKSSRVIPTMLVGILIMKKRYKVKDYVVVALLSLGLVFFVQADVKVSPS----FHPLGIIFICMALAVDAAIVNIQEFTLRKYDASHDELIFYSYGLGSIILFIYCLLSWELFEGIVFLQSHGLRATCCLLVFCSCGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFP-KPATGMHVVGGLLFVSGLSVKA 437
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A7S2W4R9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4R9_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.060e-69 Identity = 132/275 (48.00%), Postives = 186/275 (67.64%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKG--MKALLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTK 819
E + + +F R+ LF+TLLQF GY A +Q K +PI+ L LQA MQGL+N+SM YLNYPAKVLFKSSR++P M FGV + ++YS ++Y + ++VTGL FM A+ +S F VGV I+ +LV+DA IIN+QE + +Y+S ++E+I SY G++ L++ + TG++ +G+ F HH+ +K L+ + +FA+ G+ GVS VAALTKRFGAL +AITTTARKALTL+LSF FP KPF H++G +F+ GLV K
Sbjct: 97 ELVSIHLFNRQFSLFVTLLQFCGYTFFAFLQWVGRDSKSNTVPIVYGITLAILQASMQGLSNLSMRYLNYPAKVLFKSSRVIPTMMFGVAFYHKRYSLKEYATIGVLVTGLLIFMLADASSSPE----FDPVGVILITGSLVVDAGIINLQEYMFTQYNSNEEEMIFMSYAGGSLVLLLVCMGTGEVNEGLAFFHHQADPLKTLVIIVVFAACGFCGVSSVAALTKRFGALIAAITTTARKALTLVLSFFFFP-KPFLPGHVLGLVLFIAGLVLK 366
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A6U4D8T4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D8T4_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.090e-65 Identity = 132/291 (45.36%), Postives = 188/291 (64.60%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHH-------------------KGMKALLA-VTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLV 813
E +VV +F+R GLF+TLLQF GYA A + R ++ R++P+ Y GF QA MQGLTN+SM YLNYPAKVLFKSSR+V + GV++ R+Y+ DY+V FL+V GL F+ A+ +S F+ +GVG I AL ID+ ++N QE IM R+++ ELI+++Y G+ +L++ +LFTG+L +G+ FL G+ ++ + LF + G+ GVS VAALTKRFGAL SA++TTARKA+TLMLSF++FP KP T H++G + +V
Sbjct: 174 ERIVVQVFRRRFGLFVTLLQFSGYAFFAGLNRVFFHERGRRVPMKYYLLTGFAQAAMQGLTNLSMQYLNYPAKVLFKSSRVVCTILVGVLYWKRRYAATDYIVAFLMVFGLIIFVTADIESSPE----FNPLGVGLILCALFIDSFMVNFQEIIMRRFNASHHELILYTYSWGSAFLLLLTLFTGNLWEGLRFLQGGMANDDVPVGAGAESGGSGPGLAVIVVQMLLFTACGFFGVSLVAALTKRFGALVSALSTTARKAMTLMLSFVIFP-KPVLTNHVVGGLILCFAMV 459
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A6H5JV49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV49_9PHAE) HSP 1 Score: 217 bits (553), Expect = 2.970e-59 Identity = 108/151 (71.52%), Postives = 130/151 (86.09%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQ 453
EYLVV IF+R+ GLF+T LQFFGYAACAA++R +H++ RK+P+ Y GLGFLQA MQGLTN+SM+YLN+PAKVLFKSSR+VPIMCFGVVWQ ++YS RD +VV IVTGLATFMNAETR+S S+TP SL+G+ ISLALVIDAA IN+Q
Sbjct: 382 EYLVVKIFERKFGLFMTFLQFFGYAACAALRRRVHRETVRKVPLRLYFGLGFLQAVMQGLTNVSMMYLNFPAKVLFKSSRIVPIMCFGVVWQRKRYSMRDCLVVCFIVTGLATFMNAETRSSAESDTPCSLLGILYISLALVIDAANINMQ 532
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A6H5JSQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSQ8_9PHAE) HSP 1 Score: 191 bits (484), Expect = 4.530e-52 Identity = 137/322 (42.55%), Postives = 171/322 (53.11%), Query Frame = 1
Query: 451 QEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHK---------------------------GMKALLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTKATGKKSSSNLQVTQAATSSPGTTPFIRSRGRKRLPAGRDSFDDSSSHSAAPLLSVTSGGGVSCKGGXXGDIDRS-------QSKSPDGAEGSANVVGHSGGYPVRHRGYPK-------NGNDATGTA-DRDSGMAAGRGGRWARARSPQGDRQIQRSP-RRRMISPPVSGLG 1287
QEE+MN Y SCQDELIMFSYLCGTVY+ +F+G+L G +FLH K G +AL+AV L+ AG+LG SC ALTK+FGALHSAITTTARKA+TLMLSF+ F K F+ QHL+GA VF++GL+ ++ +SP TPFI+ RK L D + + LS GG C G G + S QS SP +G A++ G SGG PVRHRG PK +G G+ R+ G+GG W R Q RSP R R+ SPPV+GLG
Sbjct: 4 QEEVMNVYASCQDELIMFSYLCGTVYVGSYCMFSGELVSGFMFLHEKVGAEGGGYSWHRSSRVADVGGACWQVSGPRALVAVMLYCGAGFLGGSCAVALTKKFGALHSAITTTARKAVTLMLSFVFF-QKAFTPQHLVGATVFMIGLL-------------AAESVDNSPAATPFIQPTQRKHL------SDAEAGQLSPAALSSGGSGGDPCSGDGYGGVRGSHADTACTQSPSPVRQKGPASLAGASGGNPVRHRGNPKLCGGPAASGGGGVGSERGREGAGXXGQGGHWVR----QKQFSPPRSPFRARIASPPVTGLG 301
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A7S3PXW5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXW5_9STRA) HSP 1 Score: 189 bits (481), Expect = 8.930e-50 Identity = 119/303 (39.27%), Postives = 171/303 (56.44%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAI---------------QRGMHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKGMKALL---------------AVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTK 819
E + V + R+LGLF+ ++QF GYA + I + Q++ ++P+ Y L L+A +TNM+M YLNYPAK L KSSR+V M FG + ++Y+ DY VV L+VTGLA FM+A++R+S F +G+G ++++L+ D AIIN+ E+IM Y+ QDE I Y V +V A+ GDL +G +L G + A+ LFAS G+ G SC A +TK FGAL +IT+TARKA TL LSF +F N + +H+ G A+F+ LV K
Sbjct: 120 ELISVQLCDRQLGLFIAVMQFMGYAVWSKILNYHVKKKLAAKSIRENNSFSQQKMEVPVRYYILLSVLRAIDASMTNMAMAYLNYPAKTLMKSSRVVFTMLFGTLLGRKRYNATDYFVVLLMVTGLAIFMHADSRSSAV----FQPLGIGMLTISLMCDGAIINMSEKIMKEYNVGQDEFIYKLYSIALVGIVGAAAVRGDLVEGSKYLLTPGTYGEILRGEDTTWSVRGKNFAIFLFASTGFFGSSCSALITKEFGALTMSITSTARKATTLFLSFALF-NNVCTKEHVGGIALFIWALVAK 417
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A1E7EVI5_9STRA (UAA-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVI5_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.350e-49 Identity = 120/292 (41.10%), Postives = 165/292 (56.51%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQKE---RKIPIIT----------------YAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKGMKALLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTK 819
E L V + R+LGL+L +QF GY A I R QK+ RK P I Y GL L+A +TN++M Y+NYPAK L KSSR+V M FG + G+KY+ DY +V +V GLA F++A+ TS F GV ++++L+ D AI N+ E+IMN+Y QDE I Y V + A+ GDL G++ + V LF+S G+ G SC AA+TK+FGAL +IT+TARKA TL LSF++F N+ + QH+IG +F+ L TK
Sbjct: 31 ELLSVRLCSRQLGLYLATVQFVGYTFLAYILRTYVYQKQNPGRKTPKIISSGSCGVATLIVPFKLYLGLSLLRAFELAMTNLAMQYINYPAKTLIKSSRIVFTMIFGALISGKKYNLTDYAIVMCMVCGLAIFLHADA----TSSAVFHSSGVVMLTISLMCDGAITNMSEKIMNQYKVGQDEFIFRMYSIALVAISAAAWAKGDLADGMV-----STGKICVVILFSSMGFFGSSCAAAITKQFGALSMSITSTARKATTLFLSFLLFDNE-CTMQHIIGIIIFICALTTK 312
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A7S3L590_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L590_9STRA) HSP 1 Score: 187 bits (475), Expect = 6.390e-49 Identity = 119/318 (37.42%), Postives = 170/318 (53.46%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRG-MHKQKERKI------------------PIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKGMKA-----------------LLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTKATGKKSSSN 846
E + V + R+LGLFL ++QF GY A I R ++ Q R++ P + Y GL L+A G+TN++M Y+NYPAK L KSSR+V M FGVV + Y DY++V +V GLA FM+A+ +S F GV ++++L+ D AI N+ E IMNRY QDE I Y V + I + GDL++G++F+ G + + LF+S G+ G SC AA+TK FGAL +IT+TARKA TL LSF +F N + +HL+G +F+ L K+ + N
Sbjct: 70 ELISVELCNRQLGLFLAMMQFSGYTLLAYILRNFVYHQNLRQVSARQAANASYQPPAAPVVPFLLYLGLSLLRAIDLGMTNLAMQYINYPAKTLMKSSRVVFTMLFGVVIARKVYKTVDYVIVMGMVAGLALFMHADANSSAV----FDWAGVAMLTVSLLCDGAISNMSETIMNRYGVGQDEFIFRMYSIALVAITIVAALKGDLREGLIFMSQPGSYGPEMSLPIEQRTWSVPGKVAVMVLFSSMGFFGSSCSAAITKNFGALTMSITSTARKATTLFLSFFLFHNV-CTLEHLMGVFIFISSLTAKSLRRGDKKN 382
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Match: A0A7S4TB98_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TB98_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.130e-48 Identity = 118/309 (38.19%), Postives = 170/309 (55.02%), Query Frame = 1
Query: 1 EYLVVGIFQRELGLFLTLLQFFGYAACAAIQRGMHKQK---------------------ERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPIMCFGVVWQGRKYSKRDYMVVFLIVTGLATFMNAETRASETSETPFSLVGVGCISLALVIDAAIINIQEEIMNRYDSCQDELIMFSYLCGTVYLVIASLFTGDLQQGVLFLHHKGMKA---------------LLAVTLFASAGYLGVSCVAALTKRFGALHSAITTTARKALTLMLSFIVFPNKPFSTQHLIGAAVFVLGLVTK 819
E + V IF R+LG+FL QF Y A + + R K +PI Y GL ++A +TN++M Y+NYPAK L KSSR++ M FGV+ +KY +DY VV L+VTGLA FM+A+ +S T F ++GV ++++L+ D A+ N+ E IMN+++ CQDE I Y T+ +V ++F GDL G L G A + + LF++ G+ G SC AA+TK FGAL ++IT+T RKA TL LSF FPN + +H++G +F+L LV K
Sbjct: 187 ELISVQIFGRKLGMFLAASQFSIYTAWSYLLRTFVHSKGSAPTSISSSPSKTKTSNAFPTSTVPITMYIGLSLIRALDLAMTNLAMQYINYPAKTLMKSSRIIWTMMFGVIVLKKKYKIQDYAVVLLMVTGLAIFMHADANSS----TIFDMLGVVMLTVSLICDGAVSNMSEAIMNQFNVCQDEFIFNLYSIATIAIVAGAIFNGDLFLGFERLLTPGTLAEIEAGEMPTWSVTGKITVLFLFSTTGFFGSSCSAAITKNFGALITSITSTVRKATTLFLSFAFFPNT-CTLEHIVGIVLFLLALVGK 490 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20329.5773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20329.5773.1 >prot_H-elongata_contig20329.5773.1 ID=prot_H-elongata_contig20329.5773.1|Name=mRNA_H-elongata_contig20329.5773.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=402bp MHKQKERKIPIITYAGLGFLQACMQGLTNMSMVYLNYPAKVLFKSSRMVPback to top mRNA from alignment at H-elongata_contig20329:928..6815- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20329.5773.1 ID=mRNA_H-elongata_contig20329.5773.1|Name=mRNA_H-elongata_contig20329.5773.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5888bp|location=Sequence derived from alignment at H-elongata_contig20329:928..6815- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20329:928..6815- >mRNA_H-elongata_contig20329.5773.1 ID=mRNA_H-elongata_contig20329.5773.1|Name=mRNA_H-elongata_contig20329.5773.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2412bp|location=Sequence derived from alignment at H-elongata_contig20329:928..6815- (Himanthalia elongata Himel1 dioecious)back to top |