mRNA_H-elongata_contig20306.5762.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20306.5762.1
Unique NamemRNA_H-elongata_contig20306.5762.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: D8LKC4_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC4_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 3.370e-79
Identity = 251/557 (45.06%), Postives = 297/557 (53.32%), Query Frame = 2 
Query:    2 ASIANMMEAIKVNLPRFDQCISLLRTEIDELRDGKLDHRLREVIAIPLIDPSLHSALSKAIDGGLLLPPAPELSDSEDELVWREXXXXXXXXXXXXXXXXXXXXXXXXXXAYAXXXXXXXXXXXXSGGEKEREMSKEGRAGELLKDRSHRRGERNLGEAKWRRDGNVDRGQDDATIPTATAAANKSKDRTPQCTERVIKANGLTSSILKPPDGDDGRSLVSHNGTQVESNGSPLRDRPPILSGGGSRVAPAAPPPTPQPPLSSHRANSGVIGSCHGRNDSDRDDALEDCGIGEDERWNGGMREGGEQGTGSGIRQIASKTASV-TPETKSAKKNPGGDDPIGEMNGNEANGWSSSKRGRKRPRTAEGTSSEASSRLRMPQPR----------RQGESPEEGEGGDDNKEGRAKDDTKTVKRERADSVNVEHFRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEARRPGFVTADPGFDSIVAGTRTSRARQ 1639
            A++  MME I+ NLPRFDQCISLL+ EI E++ GK DHRLREV A+P+ DP+LHSAL+ A++GGL LP AP LSDS        XXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXX     E E   EG +G                               +A+I  A A+                                         G   +S+GS   D      GGG                                                            ++G+          T +V  P  KS KK  G         G E  G S+SKRGRKRPR     S+E S+R R P+ R                 +G+ G+D  E   +      K+ERADSV+  HFRRIALEVW+RVY+HKFAIIFRK VNPKDAPGYE++I++PMDL LI++RIMSGAL+SLDD+SRD  VMCNNAMVFNGK DPYFDYSKELRT+A+E+I EARRPGFVTADPGFDS+VAG RTSRARQ
Sbjct:    6 AALGKMMEEIETNLPRFDQCISLLQAEIGEIKAGKHDHRLREVAAMPVPDPNLHSALTSAVEGGLQLPAAPRLSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHPEHE---EGDSGS------------------------------NASIRAAWAS-----------------------------------------GAADDSDGSXXXDERKATGGGGV-----------------------------------------------------------DRGSSXXXXXXXXXTPAVGAPGPKSGKKKSGTGGGRANQQG-EDTGSSASKRGRKRPRVVGDGSAEQSARDRRPRSRGTXXXXXXXXXXXXXXXDGKRGEDGLEEEQR------KKERADSVDAAHFRRIALEVWDRVYRHKFAIIFRKAVNPKDAPGYEEIIKEPMDLSLIRERIMSGALLSLDDMSRDLCVMCNNAMVFNGKDDPYFDYSKELRTYANEVIEEARRPGFVTADPGFDSVVAGARTSRARQ 422
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A7S1ZNS7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNS7_TRICV)

HSP 1 Score: 82.0 bits (201), Expect = 1.760e-13
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 2 
Query: 1277 LEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASE-IISEARRPGFVT 1582
            L  W+R+  H+ A +FRKPVNP++APGY   I  P+DL LI++ I  G + S  DL R   ++C+N + +NG+   Y   ++E   +A + II   +R G  T
Sbjct:  135 LACWKRISNHRSAAVFRKPVNPREAPGYTDRILFPIDLSLIRKMIAGGYVESFQDLHRRIGLICHNCVKYNGRESDYGVVAREFEAYADDSIIDAVQRVGEAT 237
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: K0SQI0_THAOC (Bromo domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQI0_THAOC)

HSP 1 Score: 79.0 bits (193), Expect = 5.870e-12
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 2 
Query: 1271 IALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEARRPGFVTADPGFDSIVAGTRTS 1627
            + L +W+++  H+ A +FRK VNP +APGY + I  PMDL LI++ I  G + S+  L     ++C+N   FNG+   Y   ++E      + + EA R   V       +   GT T+
Sbjct:  212 VLLALWKKISAHRTAAVFRKAVNPAEAPGYAERIEFPMDLSLIRRMIQGGLIKSISSLHLRLGLICHNCCKFNGRESDYARLTREFEEMVDDKVLEATRHAAVVEVKTAAATAKGTGTA 330
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A1Y1UZ18_9FUNG (Bromodomain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UZ18_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 1.220e-11
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 2 
Query: 1283 VWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEAR 1564
            +W  +  H++  +F  PV  +DAP Y  +I+KPMDL  IKQR+  G + +  +  RD  +MC N++++N +    +  + E++  A   I   R
Sbjct:    2 IWNDIANHRYGPVFLNPVKVEDAPDYYDIIKKPMDLNSIKQRVKDGIITNTIEFHRDVMLMCTNSLMYNQEDSEVYPMALEMKEHADHEIKNLR 95
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A1Y3NRF6_PIRSE (Bromo domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NRF6_PIRSE)

HSP 1 Score: 75.1 bits (183), Expect = 2.660e-11
Identity = 32/101 (31.68%), Postives = 56/101 (55.45%), Query Frame = 2 
Query: 1262 FRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEAR 1564
            +R+  + +W  +  H++  +F  PV  +DAP Y  +I+KPMDL  IKQR+  G + S  +  RD  +MC N++++N +    +  + E++  A   I   R
Sbjct:   98 WRKNIMMIWNDIANHRYGPVFLNPVKVEDAPDYYDIIKKPMDLNSIKQRVKDGIITSTIEFHRDVMLMCTNSLMYNQEDSEVYPMALEMKEHADHEIKNLR 198
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A7S4ALL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALL3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.490e-11
Identity = 33/92 (35.87%), Postives = 61/92 (66.30%), Query Frame = 2 
Query: 1277 LEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEII 1552
            L VW+++Y H+ +++FR+PVNPK+APGY   IR PMDL LI++ I+S  + + + + +   ++ +N + +NG+   Y   ++E  + A+E +
Sbjct:  347 LAVWKKLYMHRSSLVFRRPVNPKEAPGYTDRIRFPMDLSLIRKLILSRHVRNYEGILKQVHLIGHNCVKYNGRESDYALVTREFESVATEYV 438
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A7R9VBG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VBG6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.100e-11
Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 2 
Query: 1277 LEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEA 1561
            L  W+R+  H+ A +FRK VNP++APGY + I  P+DL  I++ I +G + S   L R   ++C+N + +NG+   Y   ++E  ++A + + +A
Sbjct:   64 LACWKRISNHRSAAVFRKAVNPREAPGYTERILFPIDLASIRKTISAGHVDSFVRLHRRIGLICHNCVKYNGRESDYGLVAREFESYADDAVIDA 158
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A197JW83_9FUNG (Bromo domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JW83_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 1.150e-10
Identity = 31/97 (31.96%), Postives = 58/97 (59.79%), Query Frame = 2 
Query: 1262 FRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEII 1552
            +++I + +W  +  H++  +F +P+   DAPGY  +I++PMDL  IK+RI  G + + D+  RD  +M  NA+++NG+    +  +  + T   +II
Sbjct:  552 WKKILMMIWTEITNHRYGAVFMQPIKEHDAPGYYLMIKRPMDLKSIKERIRDGQITNADEFHRDVLLMFMNALMYNGEDTEVYQMAMAMMTEVEQII 648
[Close]
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A1Y2BRH2_9FUNG (Bromodomain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BRH2_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 1.620e-10
Identity = 31/97 (31.96%), Postives = 54/97 (55.67%), Query Frame = 2 
Query: 1283 VWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGA---LMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEAR 1564
            +W  +  H++  +F  PV  +DAP Y ++I+KPMDL  IKQR+  G    + S  +  RD  +MC N++++N +    +  + E++  A + I   R
Sbjct:    2 IWNDIANHRYGPVFLNPVKEEDAPDYYEIIKKPMDLNSIKQRVKDGVTIVIKSTIEFHRDVMLMCTNSIMYNQEDSEVYPMAIEMKKHADDRIKTLR 98
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BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A397J629_9GLOM (Bromo domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J629_9GLOM)

HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10
Identity = 33/102 (32.35%), Postives = 58/102 (56.86%), Query Frame = 2 
Query: 1262 FRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEARR 1567
            ++++   + + +  H++A +F+ P+  +DAPGY  ++++PMDL  +K+R+  G +   D   RD  +M  NA VFN K       + E++ F    ISE RR
Sbjct:  543 WQKLVAMILQEISNHRYASVFQNPIREQDAPGYYDIVKQPMDLRTLKKRLRDGIVHDTDQFHRDLMLMFMNASVFNRKETDIHQMATEMKDFVENQISEFRR 644
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKC4_ECTSI3.370e-7945.06Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S1ZNS7_TRICV1.760e-1338.83Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
K0SQI0_THAOC5.870e-1232.77Bromo domain-containing protein n=1 Tax=Thalassios... [more]
A0A1Y1UZ18_9FUNG1.220e-1131.91Bromodomain-containing protein n=1 Tax=Piromyces f... [more]
A0A1Y3NRF6_PIRSE2.660e-1131.68Bromo domain-containing protein n=1 Tax=Piromyces ... [more]
A0A7S4ALL3_9STRA3.490e-1135.87Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7R9VBG6_9STRA4.100e-1134.74Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A197JW83_9FUNG1.150e-1031.96Bromo domain-containing protein n=1 Tax=Linnemanni... [more]
A0A1Y2BRH2_9FUNG1.620e-1031.96Bromodomain-containing protein n=1 Tax=Neocallimas... [more]
A0A397J629_9GLOM1.900e-1032.35Bromo domain-containing protein n=1 Tax=Diversispo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20306contigH-elongata_contig20306:1075..6062 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.3
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog2880.D8LKC4
KEGG koko:K02606,ko:K11348,ko:K11380
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
EggNOG free text desc.chromatin organization
EggNOG OGsCOG5141@1,KOG0955@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036
Hectar predicted targeting categoryother localisation
Exons6
Model size2858
Cds size2202
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20306.5762.1prot_H-elongata_contig20306.5762.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20306 1091..5422 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930141.7742364-UTR-H-elongata_contig20306:1074..10901622930141.7742364-UTR-H-elongata_contig20306:1074..1090Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20306 1075..1090 +
1691679296.9685688-UTR-H-elongata_contig20306:1074..10901691679296.9685688-UTR-H-elongata_contig20306:1074..1090Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20306 1075..1090 +
1622930141.9012635-UTR-H-elongata_contig20306:5422..60621622930141.9012635-UTR-H-elongata_contig20306:5422..6062Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20306 5423..6062 +
1691679297.0489552-UTR-H-elongata_contig20306:5422..60621691679297.0489552-UTR-H-elongata_contig20306:5422..6062Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20306 5423..6062 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930141.7856889-CDS-H-elongata_contig20306:1090..11401622930141.7856889-CDS-H-elongata_contig20306:1090..1140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 1091..1140 +
1691679296.9793532-CDS-H-elongata_contig20306:1090..11401691679296.9793532-CDS-H-elongata_contig20306:1090..1140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 1091..1140 +
1622930141.8008974-CDS-H-elongata_contig20306:1999..32271622930141.8008974-CDS-H-elongata_contig20306:1999..3227Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 2000..3227 +
1691679296.9900339-CDS-H-elongata_contig20306:1999..32271691679296.9900339-CDS-H-elongata_contig20306:1999..3227Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 2000..3227 +
1622930141.811851-CDS-H-elongata_contig20306:3654..37261622930141.811851-CDS-H-elongata_contig20306:3654..3726Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 3655..3726 +
1691679297.0041394-CDS-H-elongata_contig20306:3654..37261691679297.0041394-CDS-H-elongata_contig20306:3654..3726Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 3655..3726 +
1622930141.8520024-CDS-H-elongata_contig20306:3949..41051622930141.8520024-CDS-H-elongata_contig20306:3949..4105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 3950..4105 +
1691679297.0174477-CDS-H-elongata_contig20306:3949..41051691679297.0174477-CDS-H-elongata_contig20306:3949..4105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 3950..4105 +
1622930141.8696318-CDS-H-elongata_contig20306:4331..49361622930141.8696318-CDS-H-elongata_contig20306:4331..4936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 4332..4936 +
1691679297.0259824-CDS-H-elongata_contig20306:4331..49361691679297.0259824-CDS-H-elongata_contig20306:4331..4936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 4332..4936 +
1622930141.8856232-CDS-H-elongata_contig20306:5331..54221622930141.8856232-CDS-H-elongata_contig20306:5331..5422Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 5332..5422 +
1691679297.0347328-CDS-H-elongata_contig20306:5331..54221691679297.0347328-CDS-H-elongata_contig20306:5331..5422Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20306 5332..5422 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20306.5762.1

>prot_H-elongata_contig20306.5762.1 ID=prot_H-elongata_contig20306.5762.1|Name=mRNA_H-elongata_contig20306.5762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=734bp
MMEAIKVNLPRFDQCISLLRTEIDELRDGKLDHRLREVIAIPLIDPSLHS
ALSKAIDGGLLLPPAPELSDSEDELVWREEEEAVEEETVEKEADNGAEEE
EEDGAAYADGKGAAAGGGVASGGEKEREMSKEGRAGELLKDRSHRRGERN
LGEAKWRRDGNVDRGQDDATIPTATAAANKSKDRTPQCTERVIKANGLTS
SILKPPDGDDGRSLVSHNGTQVESNGSPLRDRPPILSGGGSRVAPAAPPP
TPQPPLSSHRANSGVIGSCHGRNDSDRDDALEDCGIGEDERWNGGMREGG
EQGTGSGIRQIASKTASVTPETKSAKKNPGGDDPIGEMNGNEANGWSSSK
RGRKRPRTAEGTSSEASSRLRMPQPRRQGESPEEGEGGDDNKEGRAKDDT
KTVKRERADSVNVEHFRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEK
VIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDY
SKELRTFASEIISEARRPGFVTADPGFDSIVAGTRTSRARQTSTSSSPAA
LAQSAPRGRGKKKRQNGVGSVCGRRSSRESDSTSVADDTGDEERKVLRGG
GREDGSANGVKRKGKSVNVAARENNKKSGGRRGTKHHARSKTEIVGMSLG
EDDDIGGRRKDGRESASGSRNPSERGAGRKRAAAGKGKRRAKGGMVGSSD
EDRSARGKVRKAAKTAAKRTPTSNAGSSKKRAH*
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mRNA from alignment at H-elongata_contig20306:1075..6062+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20306.5762.1 ID=mRNA_H-elongata_contig20306.5762.1|Name=mRNA_H-elongata_contig20306.5762.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4988bp|location=Sequence derived from alignment at H-elongata_contig20306:1075..6062+ (Himanthalia elongata Himel1 dioecious)
AGCTTCAATAGCGAACATGATGGAGGCAATCAAAGTAAACTTGCCAAGGT
TTGACCAGTGCATCAGGTGAGAGGAGCTGAGCTCCCTTATTCGATGTCGA
ATCCAACCACGAAACTCTTGTCCCTGTTCCCTGTTGTTCCAGGGCGCCCG
CTGGTGAAAGGCACTGTCTGTGTCGCTTGGAACTACCGTCTGCGCATGCC
CGCTACTGTCTGGCATTGCCCAGCACGTGATTGATGTCTCCATTTCTTGG
AAGTACTGAGTGGTTCTTCGGAACGGATTGACCCATCTTTGATGCCCCAG
CGCACCGCACGTCTTGTAGTTTAAAAATTAAATTCAGTGTTGTAGTGTAT
TGTATTTCGACGATACTTCTTATCTGTATTCGTAGTTATTCGGCCCTTTC
TATAATAGGAAGAAACCTCGTGTCCTATTTTTTAATTTTAACCTAGAGCT
GTATAGTTCAGTATTATTTTCATAGAACATCGTACAGTACCTATTTTAAC
ACCTACCCGACCCCAGTGAGCCCTAATGTTTTGGCCACCCAGAGGGTGGA
TTGGCGATGGAAAAACACGGGGGTTTTTTTAAACATACTTCGTATCAACT
ACATGGGCATCTCACACAACGATTATCTACTTGGGCAAATGTACCACCTC
TAATATCAAATGCCACGGCTGGTGCCGGATCATGCACCCATCGTTTCTCG
GAACTCACAAAATGATTTGATATAATTACTTCCGAGCATTGGACATAATA
TTTTGTTCTACAGCTTCTTGAAGCCTTACGAGCCTAAATATCTTCACTTA
ACCCGGACTGATGTACCACCTTACCCCGAACCGATCTCGTCTGGATGCCA
ACGCTTCCTGCCGCTCTTAACACGCTCGGTTTATCTTGGGGGCACAATAT
TTGGGTGTTATAAATGCTTCTCTAGTCTGCTGAGGACAGAGATAGACGAG
CTGAGAGACGGAAAGCTTGACCACCGCCTTCGTGAGGTTATCGCAATCCC
GCTTATCGATCCCAGTCTGCACTCGGCGCTTTCCAAGGCTATCGATGGTG
GGCTGCTTCTCCCTCCGGCCCCGGAGCTGAGCGATAGCGAGGATGAATTA
GTGTGGAGAGAGGAGGAGGAGGCAGTGGAAGAGGAAACAGTGGAAAAGGA
AGCGGATAATGGAGCAGAGGAGGAGGAAGAGGATGGAGCCGCATATGCAG
ACGGCAAGGGTGCTGCCGCAGGCGGAGGCGTGGCTTCGGGGGGGGAGAAG
GAAAGAGAAATGAGCAAGGAGGGACGAGCTGGGGAGTTGCTTAAGGACAG
ATCACATCGACGCGGCGAGCGAAATTTGGGCGAAGCAAAGTGGCGGAGGG
ATGGAAACGTTGATCGCGGCCAGGACGATGCGACAATACCCACGGCAACA
GCGGCGGCGAATAAGTCGAAAGACCGAACGCCTCAATGCACTGAGCGGGT
GATTAAAGCCAATGGTCTTACCTCGTCGATTTTGAAACCACCAGACGGCG
ATGACGGCCGTAGCTTGGTATCACACAACGGGACTCAAGTCGAGTCGAAT
GGTTCACCCTTGCGGGACCGACCGCCAATTTTATCCGGGGGTGGTTCGCG
CGTGGCGCCTGCTGCCCCGCCACCAACCCCCCAACCTCCACTCTCTAGCC
ATCGTGCGAATAGCGGCGTGATTGGAAGTTGTCATGGGCGGAACGATAGT
GATAGAGATGATGCATTAGAGGATTGTGGCATAGGTGAAGACGAAAGGTG
GAATGGTGGCATGAGGGAGGGAGGCGAACAAGGCACGGGTAGTGGGATTA
GACAGATCGCTAGCAAGACGGCGAGTGTTACACCAGAAACGAAGTCAGCG
AAAAAAAACCCAGGTGGTGATGATCCTATCGGTGAGATGAATGGAAATGA
AGCAAATGGCTGGAGCAGCAGCAAGCGTGGAAGGAAGCGACCGCGGACAG
CAGAGGGTACGTCCTCAGAAGCAAGCTCCCGCCTAAGGATGCCGCAGCCA
AGGAGGCAGGGCGAGAGCCCGGAGGAGGGAGAAGGGGGTGACGATAATAA
GGAAGGTCGGGCTAAGGACGACACGAAGACGGTGAAAAGAGAGAGGGCTG
ATTCTGTGAATGTGGAGCACTTCCGTCGAATTGCTCTGGAAGTCTGGGAA
CGGGTGAGCTGTCCAACCCCACAATCAACGCGTACGGAATGGTTCTATAG
TTTTATGGTTGTAAGCTTTCTTGTTCGCATGTAGGAGAGGAGCAAATGCT
TGGGCACGATGTCAACATCGGGTTAATCGCTAGTAACAGTAAAATGAGAC
ATGTATCCGAGAACTTTGTTCGAATCTAGCCACTGAGCTATCGATCCCCT
CCGTCAGGACTAGAGGAGTGGCTCCATAGCTCAGTGGTTATAACGTTATC
CTTATTTAATCACGTGGCACTCTTGCAGCTGGCTACCGTACATCCGGCGT
CATCTCCTCGTTGTCTTGAAATACTTCGTAGCTATATTGGGTACTGACTG
TTTTTGACAATCGTGTATCGACTCCGGTGAAACTTCAAGAGTAACGCAAC
GTAACATAACGTCTGCACTCCTCCAAACAGGTGTACAAGCACAAGTTCGC
GATCATCTTCCGAAAACCCGTGAATCCTAAAGATGCGCCTGGATACGAAA
AGGTGTGATCGCTTTGCGAATTTTATGTGAAAGCCTCGAGAAAGATGAAC
ACCTGGTAGATAAAATGAAGGTTTCCCTCGATTATACTCCCCTCAGAGGA
GTTCAATATCCAGCACACGTTTGATACGTCCGGATCGGAAATCCATCGCT
TCAGAGCTCTGATCCCATCTCCAATCTCCAATTAACCCTACGTCACTTCG
TCGATGTCGTCCCCCTTCCTCGCAGGTCATCAGGAAGCCTATGGATCTGG
GTCTCATCAAGCAACGCATCATGTCGGGCGCTCTCATGTCTTTGGACGAC
CTGAGTCGCGATTTTTTCGTTATGTGCAACAACGCCATGGTGTTCAATGG
AAAGGGGGACCCATACTTCGATTACAGCAAGGTGTGTGCGGGCGTTGACG
GCGGGGCTGTGGATTAGGTTGGTCGATAGAGTCCGCGAGGTGCTTCAGTC
TGGGTTGTGTGCGCTGGGAATGTCCAAGGTGGTACTGAACCGTCATTGCA
GCCAATCCTTTTCCGCGCCAGACTGTCTCAGCCTTAATCATGAACGTTGT
GTGCCTTACTGGATTTCATTTCGATGTCATATTTTCACGCCAAACCATCG
GCGATAGGAGCTAAGGACATTTGCGAGCGAGATCATATCGGAGGCACGTC
GACCGGGGTTCGTTACCGCCGACCCCGGCTTTGACAGTATCGTAGCGGGC
ACGCGTACCTCCCGCGCTCGACAGACGTCGACGTCGTCCTCTCCCGCGGC
GCTTGCGCAGAGCGCGCCGCGCGGCAGGGGAAAGAAGAAAAGACAGAATG
GAGTGGGAAGCGTTTGTGGACGGCGCAGCTCCAGGGAGTCTGACTCGACA
TCGGTGGCAGATGATACGGGGGACGAGGAGCGTAAGGTTCTACGCGGAGG
GGGTCGAGAAGACGGGAGCGCGAACGGTGTGAAGAGGAAAGGGAAATCCG
TGAATGTTGCCGCTAGGGAAAATAACAAAAAGAGCGGTGGCAGACGAGGG
ACCAAGCATCATGCAAGAAGCAAGACCGAAATCGTCGGGATGAGCTTGGG
TGAGGACGATGACATAGGAGGGAGGAGGAAGGACGGTCGGGAGAGTGCGT
CCGGGAGCAGAAACCCAAGCGAGCGCGGAGCGGGGAGAAAGCGAGCCGCG
GCCGGAAAAGGGAAAAGACGCGCGAAGGGAGGGATGGTCGGCAGCAGCGA
CGAGGATCGAAGGTGGGGATCTCCTCGACCTAATGATTATGAGAGACGTG
TCGCGCGGTCTACAATTGAACCGCCTCATCCGCGACGATAATTCTTTGTT
GGATGGCTTGGCGTGGACTTTCTCGACAGTTTTGGGTTTCATTGCTTTTC
TTATTTTTCAACTCCCTGTAATATTTGCTGTTAGAGATATCCCAAAATTA
TTGCGACCTTGCGCTGGGGCTTTTGTAGTCAATGTGCACGTACTCAAAAA
CTGTGAGCAATGGATCTTGTCCAAATGCTGTCTAATATACGTTTCTTATC
TATGTAGCGTAACCGCAATCATGTGGATCCAAGTTTTTTCACAAAAGGTT
CTTAACTCCGTTCGTCCGACTCGTCCGCGTTCGTCGTTGTTGTTCACCGC
GCTGCAGCGCGCGCGGGAAGGTTCGAAAGGCTGCAAAGACTGCCGCGAAG
CGAACACCAACGTCAAATGCAGGCTCGAGCAAGAAGAGAGCGCACTGAAC
GGTCGTCTTGCCCACCTGGCCCTCTTGAACATGGTCCTTACAGTGCCGTT
GGTGGTAGCTCTGTGATTTGAGCTGGGGACAGCCCTCGAAGGCTTCTGCG
TCGAAAACGGCACCAGAAGGCAACTTTGAATGCTTGTGTGGACCCAAGTG
ATAAGAAGGTCCACACCGGGCACGGTGATGCATACAGCGCACTTAGGAGC
AACGGAGCTGTTTGGATACCTCCAATCCATTCTGACGGAACTCCGCGTCA
CTTATGCGGATTAACCCTGCCGAACGGCCAACTTTTTCCAACCCTCGGAA
TTGTGGTCCCATTTGGACGAGAGGCCTCGGCCAAGGTTTACGTCAAAACG
CTAAAGCACACCCGGGATGTAGTTGAAAGCGATCAGCCAAAAAAGAGGGA
GCAGCTTTTTCAAAACGCTACCCCAAACAAGACTCCGCCATGTGCCATGA
AAATGTAGGAATACACGCACGCGCATGGTCAAGTCGATAGTCTTTGGATC
TAGCGTTGTTCGTTGTTCTTACACTATTAATAGACCAAATGGAAAATGGT
GGTTCACTGGACAGCGAAAAATATTAGAAAACAAAACAAATTCTGAAATC
TGACGACACGAAATTTCCCGGGATATTTCTCTTCCAAA
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Coding sequence (CDS) from alignment at H-elongata_contig20306:1075..6062+

>mRNA_H-elongata_contig20306.5762.1 ID=mRNA_H-elongata_contig20306.5762.1|Name=mRNA_H-elongata_contig20306.5762.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4404bp|location=Sequence derived from alignment at H-elongata_contig20306:1075..6062+ (Himanthalia elongata Himel1 dioecious)
ATGATGGAGGCAATCAAAGTAAACTTGCCAAGGTTTGACCAGTGCATCAG
ATGATGGAGGCAATCAAAGTAAACTTGCCAAGGTTTGACCAGTGCATCAG
TCTGCTGAGGACAGAGATAGACGAGCTGAGAGACGGAAAGCTTGACCACC
GCCTTCGTGAGGTTATCGCAATCCCGCTTATCGATCCCAGTCTGCACTCG
GCGCTTTCCAAGGCTATCGATGGTGGGCTGCTTCTCCCTCCGGCCCCGGA
GCTGAGCGATAGCGAGGATGAATTAGTGTGGAGAGAGGAGGAGGAGGCAG
TGGAAGAGGAAACAGTGGAAAAGGAAGCGGATAATGGAGCAGAGGAGGAG
GAAGAGGATGGAGCCGCATATGCAGACGGCAAGGGTGCTGCCGCAGGCGG
AGGCGTGGCTTCGGGGGGGGAGAAGGAAAGAGAAATGAGCAAGGAGGGAC
GAGCTGGGGAGTTGCTTAAGGACAGATCACATCGACGCGGCGAGCGAAAT
TTGGGCGAAGCAAAGTGGCGGAGGGATGGAAACGTTGATCGCGGCCAGGA
CGATGCGACAATACCCACGGCAACAGCGGCGGCGAATAAGTCGAAAGACC
GAACGCCTCAATGCACTGAGCGGGTGATTAAAGCCAATGGTCTTACCTCG
TCGATTTTGAAACCACCAGACGGCGATGACGGCCGTAGCTTGGTATCACA
CAACGGGACTCAAGTCGAGTCGAATGGTTCACCCTTGCGGGACCGACCGC
CAATTTTATCCGGGGGTGGTTCGCGCGTGGCGCCTGCTGCCCCGCCACCA
ACCCCCCAACCTCCACTCTCTAGCCATCGTGCGAATAGCGGCGTGATTGG
AAGTTGTCATGGGCGGAACGATAGTGATAGAGATGATGCATTAGAGGATT
GTGGCATAGGTGAAGACGAAAGGTGGAATGGTGGCATGAGGGAGGGAGGC
GAACAAGGCACGGGTAGTGGGATTAGACAGATCGCTAGCAAGACGGCGAG
TGTTACACCAGAAACGAAGTCAGCGAAAAAAAACCCAGGTGGTGATGATC
CTATCGGTGAGATGAATGGAAATGAAGCAAATGGCTGGAGCAGCAGCAAG
CGTGGAAGGAAGCGACCGCGGACAGCAGAGGGTACGTCCTCAGAAGCAAG
CTCCCGCCTAAGGATGCCGCAGCCAAGGAGGCAGGGCGAGAGCCCGGAGG
AGGGAGAAGGGGGTGACGATAATAAGGAAGGTCGGGCTAAGGACGACACG
AAGACGGTGAAAAGAGAGAGGGCTGATTCTGTGAATGTGGAGCACTTCCG
TCGAATTGCTCTGGAAGTCTGGGAACGGTCTGCTGAGGACAGAGATAGAC
GAGCTGAGAGACGGAAAGCTTGACCACCGCCTTCGTGAGGTTATCGCAAT
CCCGCTTATCGATCCCAGTCTGCACTCGGCGCTTTCCAAGGCTATCGATG
GTGGGCTGCTTCTCCCTCCGGCCCCGGAGCTGAGCGATAGCGAGGATGAA
TTAGTGTGGAGAGAGGAGGAGGAGGCAGTGGAAGAGGAAACAGTGGAAAA
GGAAGCGGATAATGGAGCAGAGGAGGAGGAAGAGGATGGAGCCGCATATG
CAGACGGCAAGGGTGCTGCCGCAGGCGGAGGCGTGGCTTCGGGGGGGGAG
AAGGAAAGAGAAATGAGCAAGGAGGGACGAGCTGGGGAGTTGCTTAAGGA
CAGATCACATCGACGCGGCGAGCGAAATTTGGGCGAAGCAAAGTGGCGGA
GGGATGGAAACGTTGATCGCGGCCAGGACGATGCGACAATACCCACGGCA
ACAGCGGCGGCGAATAAGTCGAAAGACCGAACGCCTCAATGCACTGAGCG
GGTGATTAAAGCCAATGGTCTTACCTCGTCGATTTTGAAACCACCAGACG
GCGATGACGGCCGTAGCTTGGTATCACACAACGGGACTCAAGTCGAGTCG
AATGGTTCACCCTTGCGGGACCGACCGCCAATTTTATCCGGGGGTGGTTC
GCGCGTGGCGCCTGCTGCCCCGCCACCAACCCCCCAACCTCCACTCTCTA
GCCATCGTGCGAATAGCGGCGTGATTGGAAGTTGTCATGGGCGGAACGAT
AGTGATAGAGATGATGCATTAGAGGATTGTGGCATAGGTGAAGACGAAAG
GTGGAATGGTGGCATGAGGGAGGGAGGCGAACAAGGCACGGGTAGTGGGA
TTAGACAGATCGCTAGCAAGACGGCGAGTGTTACACCAGAAACGAAGTCA
GCGAAAAAAAACCCAGGTGGTGATGATCCTATCGGTGAGATGAATGGAAA
TGAAGCAAATGGCTGGAGCAGCAGCAAGCGTGGAAGGAAGCGACCGCGGA
CAGCAGAGGGTACGTCCTCAGAAGCAAGCTCCCGCCTAAGGATGCCGCAG
CCAAGGAGGCAGGGCGAGAGCCCGGAGGAGGGAGAAGGGGGTGACGATAA
TAAGGAAGGTCGGGCTAAGGACGACACGAAGACGGTGAAAAGAGAGAGGG
CTGATTCTGTGAATGTGGAGCACTTCCGTCGAATTGCTCTGGAAGTCTGG
GAACGGGTGTACAAGCACAAGTTCGCGATCATCTTCCGAAAACCCGTGAA
TCCTAAAGATGCGCCTGGATACGAAAAGGTGTACAAGCACAAGTTCGCGA
TCATCTTCCGAAAACCCGTGAATCCTAAAGATGCGCCTGGATACGAAAAG
GTCATCAGGAAGCCTATGGATCTGGGTCTCATCAAGCAACGCATCATGTC
GGGCGCTCTCATGTCTTTGGACGACCTGAGTCGCGATTTTTTCGTTATGT
GCAACAACGCCATGGTGTTCAATGGAAAGGGGGACCCATACTTCGATTAC
AGCAAGGTCATCAGGAAGCCTATGGATCTGGGTCTCATCAAGCAACGCAT
CATGTCGGGCGCTCTCATGTCTTTGGACGACCTGAGTCGCGATTTTTTCG
TTATGTGCAACAACGCCATGGTGTTCAATGGAAAGGGGGACCCATACTTC
GATTACAGCAAGGAGCTAAGGACATTTGCGAGCGAGATCATATCGGAGGC
ACGTCGACCGGGGTTCGTTACCGCCGACCCCGGCTTTGACAGTATCGTAG
CGGGCACGCGTACCTCCCGCGCTCGACAGACGTCGACGTCGTCCTCTCCC
GCGGCGCTTGCGCAGAGCGCGCCGCGCGGCAGGGGAAAGAAGAAAAGACA
GAATGGAGTGGGAAGCGTTTGTGGACGGCGCAGCTCCAGGGAGTCTGACT
CGACATCGGTGGCAGATGATACGGGGGACGAGGAGCGTAAGGTTCTACGC
GGAGGGGGTCGAGAAGACGGGAGCGCGAACGGTGTGAAGAGGAAAGGGAA
ATCCGTGAATGTTGCCGCTAGGGAAAATAACAAAAAGAGCGGTGGCAGAC
GAGGGACCAAGCATCATGCAAGAAGCAAGACCGAAATCGTCGGGATGAGC
TTGGGTGAGGACGATGACATAGGAGGGAGGAGGAAGGACGGTCGGGAGAG
TGCGTCCGGGAGCAGAAACCCAAGCGAGCGCGGAGCGGGGAGAAAGCGAG
CCGCGGCCGGAAAAGGGAAAAGACGCGCGAAGGGAGGGATGGTCGGCAGC
AGCGACGAGGATCGAAGGAGCTAAGGACATTTGCGAGCGAGATCATATCG
GAGGCACGTCGACCGGGGTTCGTTACCGCCGACCCCGGCTTTGACAGTAT
CGTAGCGGGCACGCGTACCTCCCGCGCTCGACAGACGTCGACGTCGTCCT
CTCCCGCGGCGCTTGCGCAGAGCGCGCCGCGCGGCAGGGGAAAGAAGAAA
AGACAGAATGGAGTGGGAAGCGTTTGTGGACGGCGCAGCTCCAGGGAGTC
TGACTCGACATCGGTGGCAGATGATACGGGGGACGAGGAGCGTAAGGTTC
TACGCGGAGGGGGTCGAGAAGACGGGAGCGCGAACGGTGTGAAGAGGAAA
GGGAAATCCGTGAATGTTGCCGCTAGGGAAAATAACAAAAAGAGCGGTGG
CAGACGAGGGACCAAGCATCATGCAAGAAGCAAGACCGAAATCGTCGGGA
TGAGCTTGGGTGAGGACGATGACATAGGAGGGAGGAGGAAGGACGGTCGG
GAGAGTGCGTCCGGGAGCAGAAACCCAAGCGAGCGCGGAGCGGGGAGAAA
GCGAGCCGCGGCCGGAAAAGGGAAAAGACGCGCGAAGGGAGGGATGGTCG
GCAGCAGCGACGAGGATCGAAGCGCGCGCGGGAAGGTTCGAAAGGCTGCA
AAGACTGCCGCGAAGCGAACACCAACGTCAAATGCAGGCTCGAGCAAGAA
GAGAGCGCACTGACGCGCGCGGGAAGGTTCGAAAGGCTGCAAAGACTGCC
GCGAAGCGAACACCAACGTCAAATGCAGGCTCGAGCAAGAAGAGAGCGCA
CTGA
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