mRNA_H-elongata_contig203.5760.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig203.5760.1
Unique NamemRNA_H-elongata_contig203.5760.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: D7FQA9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA9_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 1.080e-147
Identity = 227/367 (61.85%), Postives = 278/367 (75.75%), Query Frame = 1
Query:   13 YMVVVGESTNGPWFEYLTSR-DLDEEDPPPVCVAPSTARFEVTESASFNMSVVLHDLYSAYLLVCRHGEEFNGNVTSTFINLDPEGDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLR----TVAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCD-TSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCIQLPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTILSWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRAFDHSLEQEHS 1095
            Y+VVV ES    +F  L    DL+ +DPPPVC APS  RFE+T   SFNMS+  HD YS YL+VC  G  F G+VTSTF+N  PEGDLTQHLPI  +MLP+LYT+M+VVYV  T AW+GEM RLR      +HVLPVH LCL C+++K ++ IL A Y+HRQS  G   D  R     V +F   +++++FLLTLLL SLGWGFIRPSLR KE WLV  TIGFYA V+L+++SCD T+  +WC  + LMAYA+ SL+ML+TVVAINFNI+HIRFCIQLPWTSSSALEY+KLSRYLS R+TFLAYLL+PT L++V+  ILSWEY+WI+  + EF+  +I+A LG TFAP DPWLLTRAFDHSLEQ+ S
Sbjct:   68 YLVVVAESMTSQYFTTLLEMSDLEADDPPPVCAAPSAGRFEITGHDSFNMSIAHHDRYSPYLVVCDRGGSFYGHVTSTFLNRVPEGDLTQHLPINQAMLPALYTLMSVVYVALTAAWLGEMVRLR------RHVLPVHSLCLACVVVKTVQFILRAIYFHRQSVHGGEGDRDRLLGAAVVLFIV-LFQVVFLLTLLLFSLGWGFIRPSLRSKEGWLVTITIGFYAGVSLIDASCDDTNSSSWCSGVGLMAYAVRSLVMLTTVVAINFNITHIRFCIQLPWTSSSALEYVKLSRYLSYRMTFLAYLLMPTVLLMVSVFILSWEYDWIYVALDEFVRFLIIAHLGVTFAPLDPWLLTRAFDHSLEQQGS 427          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A836CN10_9STRA (Lung seven transmembrane receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN10_9STRA)

HSP 1 Score: 244 bits (624), Expect = 2.210e-71
Identity = 140/357 (39.22%), Postives = 214/357 (59.94%), Query Frame = 1
Query:   13 YMVVVGESTNGPWFEYLTSRDLDEEDPPPVCVAPSTARFEVTESASFNMSVVLHDLYSAYLLVCRHGEEFNGNVTSTFINLDPEGDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCIQLPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTILSWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRAFDHSLE 1083
            Y+++ G S    +F        D      VC APS ARFE+  + S N++V   D Y+AYLL+C+    F G VT+T +NL P+G+L+Q LPIE S LP LYTV+ VV+      W+ ++ R R        V+ VH++    + ++++   ++A Y++R  +   +  +L+ +A   ++  ++LF+ T  LI LGWG++R  L  +E  L+A      + ++  E+ C       C  + ++ Y + SLIML+ VVAINFNI+H+R  + +PWTSS ALEYLKL +YL+ R TFLAYLLLP A + V   +L WEY W+   ++EF+ ++I   +G TFAPF+ W +TRA+D SLE
Sbjct:   68 YIILAGRSAAASFFHPNLKGSPDWA---AVCSAPSAARFEIVSTTSVNVTVPTADQYTAYLLLCQD-LLFAGTVTTTLLNLTPDGELSQQLPIEDSPLPRLYTVVLVVWALVAALWLAQLWRCR------AFVIKVHHMFTAVVGLRVVMEAVMAAYWYRLQQPPGSSPSLQRLASLLSNADQVLFIFTATLIGLGWGYMRQRLSTQEVRLLAVVFTAQSALSAAEALC-VGGGPLCGIVVMLDYILRSLIMLTMVVAINFNIAHMRAALHVPWTSSMALEYLKLKQYLTFRWTFLAYLLLPIATLAVQYAVLRWEYLWVGALLEEFLMVVITVHIGVTFAPFNTWFITRAYDQSLE 413          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A7S2SFN9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFN9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.700e-43
Identity = 117/369 (31.71%), Postives = 189/369 (51.22%), Query Frame = 1
Query:   13 YMVVVGESTNGPWFEYLTSRDLDEEDPPPVCVAPSTARFEVT----ESASFNMSVVL--HDLYSAYLLVCRHGEEFNGNVTSTFINLDPEGDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFC---IQLPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTIL-SWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRAFDHSLEQE 1089
            Y++V+       W++ L     DE     +C  P+ AR++V      SA+ ++S+V+   D YS    +C     F+G  + +F+NLD  G  TQHL IE + LP +   +A +Y      WV +  RLR      Q V P+H+   +C+  K++ET   A      +  G  +     +A F     ++LFL  LLL+S+GW   R     +E   +  T G +  +T+    CD  +   C  L+L  Y + SL++L+ +VA+NFNI+ +R     +  P T   A++Y K+  +   R  FLAYLL PT L+++ + +L SWEYEW+   +   + ++I   +GT  AP +  LL+RAFD +  Q+
Sbjct:  141 YLLVLTLDQKEEWWDNLDPSPSDEH--LAICGTPAFARYQVVAGNGSSANVSVSLVMPRSDQYSVLFTLCEASGSFDGQASWSFVNLDLAGHHTQHLVIEKTPLPIINLGLACIYAALFVFWVADCLRLR------QTVAPIHWAIALCLGSKVLETAAQAALTLEMNATGSEKGAQWLLAKFSEGFSDLLFLSILLLVSVGWTLTRFRFTPREMVALVATFGLFVVITVFRVLCDFRD-GNCQGLTLGEYILRSLVLLAIIVAMNFNITQLRQMLAEVPPPITPHMAVQYAKVHIFQMFRWAFLAYLLAPTTLLILEAAVLLSWEYEWVNDLLSHLVFLLIYVHVGTAIAPSNHHLLSRAFDRNPAQD 500          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A7S1CFX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFX5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.070e-38
Identity = 114/349 (32.66%), Postives = 175/349 (50.14%), Query Frame = 1
Query:   13 YMVVVGESTNGPWFEYLT-SRDLDEEDPPPVCVAPSTARFEVTESASFNMSVVLHDLYSAYLLVCRHGEEFNG----NVTSTFINLDPE-GDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCIQ-LPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTILSWEYEWIFYGMKEFITMMILAQLGTTFAP 1038
            Y+ +   S    W+  L+ SR+L  +    +C  PST R+E T   SF   V   D Y+  +L CR G   +      VT      +P  GD   H+ +E+  + +LY  M  +++   G W       R   H RQ    VH LC + ++++ ++  L A ++       +    L       + +   LFLLT+LLI+LGW   R SL  +E  ++  T   Y  V +  + C+T+  A C AL L  Y + SL+ML  ++A+NFNI+H+R  I   PW  S    Y +L+++ S R TFLAYLLLPT +++   TILSW +EW+   M E + + +   +G TF P
Sbjct:   75 YVALFRRSDWEAWYSTLSRSRNLLLQ----MCQFPSTMRYEATGKFSFRYEVRDQDQYTLQVLACRVGGRSDPMAPTQVTGYVTLKNPALGDGHAHMSLEMYGVDTLYFAMLGLHLAMLGYWAWATMIARTRRHRRQ----VHVLCFVLLIVRCVDLALSAAHFVSLGGTPEVDLPLFKAHQIASALATALFLLTMLLIALGWKITRASLTGRELQMLVGTFVVYTVVGVAVAFCETT--AACGALQLAEYVLRSLLMLGIIIAMNFNITHVRATIHDSPWAPSLPAAYKRLNQFHSFRWTFLAYLLLPTLILIFQITILSWSFEWVSTLMGELLLLYVYTHVGFTFRP 413          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A7S3HM84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM84_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.880e-35
Identity = 108/367 (29.43%), Postives = 179/367 (48.77%), Query Frame = 1
Query:   16 MVVVGESTNGPWFEYLTSRDLD-EEDPPPVCVAPSTARFEVTESASFNMSV---VLHDLYSAYLLVCRHGEEFNG---NVTSTFINLDPEGDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEI----LFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCI-QLPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTILSWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRAFDHSL 1080
            ++++       W+  L   D D  ++   +C  P+  R E+  S S    +   V  D YS  +L CR G   N    ++T    N  PE D   H PIE  M   +     ++Y       +G   +L +A    +H+   HY+ L+ ++   I   +   YY+  ++ G    +L    +   +V+ +    +FLL+LLL+S+GW  IR SL  KE  L+   IG Y    +  + C  S    C AL L+ + I SLI+L  ++A+NF+++ +R  +   PW  S+ L+Y +  +Y   R+ FL YLLLPTA ++   +   WE  WI + + + + + ++  +G TF+P    LL RAFD S+
Sbjct:   65 LLIMSSDQKDGWYGGLDKSDTDVTQNINNLCNQPAMLRREIFGSGSIKFDIDYAVGLDQYSVGVLQCREGYTSNPVSVDLTLNMKNARPESDSYSHFPIEQVMEVRVLQGELILYALMI---LGMCGQLYVAGRYARHI---HYVFLLTLVTTFIYVSIKYGYYYDYNRTGSTNTSL----MIAQNVFGVFSNGMFLLSLLLLSVGWTMIRSSLLEKEVQLIQIGIGAYFAFGIAGAVCINSSDTTCQALDLVPFIIQSLILLGVIIAMNFSVTQLRAMVYNSPWVPSTPLQYARHQQYHVFRLVFLLYLLLPTAFLIFRVSQFGWEEAWIGFVLTDLLDIALIFHIGVTFSPLHEVLLIRAFDGSV 421          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A7S3XKD3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKD3_HETAK)

HSP 1 Score: 111 bits (278), Expect = 2.070e-24
Identity = 75/205 (36.59%), Postives = 103/205 (50.24%), Query Frame = 1
Query:  481 YYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIRPS--LRFKESWLVAFTIGFYACVTLMESSCDT--SEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCI-QLPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTILSWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRAFDHSL 1080
            YY    + G     L      C       FLL LLL++LG+   RP+  LR +E   +      YA +    + C    ++   C A  L  Y   S++ML  +VA NFNI H+R  +   PW++  AL Y  L+ Y   R  F+AYLLLPTAL+VV  T+L+WEY+W     +E   +++    G TFAP DP    R FD SL
Sbjct:    7 YYAAYGRAGAVPHALAVFRNLCLAAALGAFLLALLLLALGYAVNRPTRGLRGREGRALGGAFTLYAALAAALAGCGNRQNDTDLCRAFLLAEYVARSMLMLFIIVAANFNIHHLRLGLASSPWSAGLALTYRHLADYTRFRWAFIAYLLLPTALLVVQMTLLTWEYDWCAPLAEEAFLVLLYCHAGATFAPGDPAAAARPFDGSL 211          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A067CUH6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUH6_SAPPC)

HSP 1 Score: 115 bits (287), Expect = 8.410e-24
Identity = 81/278 (29.14%), Postives = 140/278 (50.36%), Query Frame = 1
Query:  250 NLDPEGDLTQHLPIE-LSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCIQLP---WTSSSALEY-LKLSRYLSLRVTFLAYLLLPTALMVVNSTILS----WEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLL 1056
            N+  +G +T+HL ++ L +LP +Y +M   +V  T  W  +  R    T+       +H +  +C++++  E ++   +Y   SK G+ +  L      C  +   + LL LLL SLGW   R  L   E  +V      Y  V + +++CD+     C    L  Y + SL++L  ++ +N++I+ ++  ++     WT S   +  ++L+ YLSLR +FLAYLLLPTA++++N T+++    W Y W  Y  +E +   I   LG    P  P  L
Sbjct:  162 NVAYDGRVTEHLGVDQLGLLP-VYMIMTAAFVLMTTLWGIDCLRKERPTY------AIHGVFGLCLVVRTFECMIKLWHYRVLSKSGRTRSYLSVGKDMCEHMTTTVLLLFLLLSSLGWSMRRRYLTQSERRIVQACFVLYVFVAMTKATCDSRNQV-CQGYMLTEYVLKSLMLLGIIITLNYSIAQLQTKLENEYGRWTESKIPKMQVRLNLYLSLRYSFLAYLLLPTAVLMINLTVINPPGTWRYVWATYVFEEVVMACIFTHLGLVLRPVHPMTL 431          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A7S2SFR7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFR7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.830e-22
Identity = 66/190 (34.74%), Postives = 106/190 (55.79%), Query Frame = 1
Query:  532 VAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFC---IQLPWTSSSALEYLKLSRYLSLRVTFLAYLLLPTALMVVNSTIL-SWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRAFDHSLEQE 1089
            +A F     ++LFL  LLL+S+GW   R     +E   +  T G +  +T+    CD  +   C  L+L  Y + SL++L+ +VA+NFNI+ +R     +  P T   A++Y K+  +   R  FLAYLL PT L+++ + +L SWEYEW+   +   + ++I   +GT  AP +  LL+RAFD +  Q+
Sbjct:   30 LAKFSEGFSDLLFLSILLLVSVGWTLTRFRFTPREMVALVATFGLFVVITVFRVLCDFRD-GNCQGLTLGEYILRSLVLLAIIVAMNFNITQLRQMLAEVPPPITPHMAVQYAKVHIFQMFRWAFLAYLLAPTTLLILEAAVLLSWEYEWVNDLLSHLVFLLIYVHVGTAIAPSNHHLLSRAFDRNPAQD 218          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: A0A1V9ZQ29_9STRA (GpcrRhopsn4 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ29_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.020e-16
Identity = 89/353 (25.21%), Postives = 152/353 (43.06%), Query Frame = 1
Query:  100 VCVAPSTARF----EVTESASFNMSVVLHDLYSAYLLVCRHGEEF-NGNVTSTFINLDPEGDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLL---------------------ISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCIQLP---WTSSSALE-YLKLSRYLSLRVTFLAYLLLPTALMVVNSTILS----WEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLL 1056
             C+ PS  R       T  + F   +     Y+  +  C     F   +V     N+  +G L++HL I+   L  LY +M VV++  T  W  +  R   + H    +         C+L + +E  +   +Y++ S+ G     L      C  +   LFL  LLL                     I   W   R  L  +E  LV      Y  V +++++C+ S    C    L  Y I SL++L  ++ +N++IS ++  ++     W+ S   +   +L+ +LSLR +FLAYLLLPT ++++N  +++    W   W+ + ++EF T+ IL  L  +  P  P  L
Sbjct:  106 TCMYPSEVRIPFDPRATNESIFTYKITSPSQYTLQIESCTPTYNFVQAHVVMK--NIASDGTLSEHLGIDQLGLVPLYGIMTVVFILMTIIWTIDTIRQPKSVHAINKIFGA------CLLARALECSIKWWHYNQYSQNGLGNSLLSITKDVCEQITTTLFLAFLLLSYPFYHFGFGIDFKAYYFLTSILHRWSMRRRFLSSRERRLVQAVFVLYFVVAMVKATCN-SGTELCQGYILTEYVIKSLMLLGIIITLNYSISKLQTKLESDHGRWSESKIPKTQARLNLFLSLRWSFLAYLLLPTVVLMLNLGVVNPPGTWRNLWVTFLIEEFATLCILFHLAISMRPIHPTTL 449          
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Match: W4H639_9STRA (GpcrRhopsn4 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H639_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.580e-16
Identity = 68/282 (24.11%), Postives = 135/282 (47.87%), Query Frame = 1
Query:  229 NVTSTFINLDPEGDLTQHLPIELSMLPSLYTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIETILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIRPSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLIMLSTVVAINFNISHIRFCIQ---LPWTSSSAL--EYLKLSRYLSLRVTFLAYLLLPTALMVVNSTILS----WEYEWIFYGMKEFITMMILAQLGTTFAPFDP 1047
            N +   +NL  +  L++HL +E   L  LY+V+ V+Y+  T  WV +  R R  T        ++ +  + ++ +  + I    +Y   S +G       T    C  V   +FL  L+L S+GW + R  L   E          Y+ V++++++C+  ++  C +  L  YA+ SL++L  +V +N++IS ++  +Q   + W  +  +   Y  L R    R++ +AYL+LP+ ++++N+ +++    W   W+    +E   + +   +  T  P  P
Sbjct:  155 NASIAMVNLGSDYALSEHLGVEQLGLIPLYSVLVVLYIAGTATWVADSVRHRPYTP------AINVVFAVALVGETSKCIAKLVFYKAFSVDGFEHSAYATARNVCDSVTSTVFLTFLVLCSMGWSWSRRPLTRSERRFFIVLFLLYSTVSVIKATCNGQDVT-CQSYMLTEYALKSLVLLGVIVTLNYSISRLQ--VQSGGMRWQQNDNVPQHYAHLERMWHFRLSLVAYLVLPSVVVLLNAGVVNPPGTWRNYWVSCLNEELFLVGVYCHMAYTLRPISP 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig203.5760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FQA9_ECTSI1.080e-14761.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CN10_9STRA2.210e-7139.22Lung seven transmembrane receptor-domain-containin... [more]
A0A7S2SFN9_9STRA1.700e-4331.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1CFX5_9STRA1.070e-3832.66Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3HM84_9STRA4.880e-3529.43Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3XKD3_HETAK2.070e-2436.59Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067CUH6_SAPPC8.410e-2429.14Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S2SFR7_9STRA1.830e-2234.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9ZQ29_9STRA1.020e-1625.21GpcrRhopsn4 domain-containing protein n=1 Tax=Thra... [more]
W4H639_9STRA1.580e-1624.11GpcrRhopsn4 domain-containing protein n=4 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig203contigH-elongata_contig203:14458..18248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.5
Seed ortholog evalue1.5e-120
Seed eggNOG ortholog2880.D7FQA9
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0006810,GO:0006897,GO:0006898,GO:0008150,GO:0012505,GO:0016192,GO:0030135,GO:0030136,GO:0030276,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032050,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0070013,GO:0072583,GO:0097708,GO:0098657
EggNOG free text desc.clathrin heavy chain binding
EggNOG OGsKOG2569@1,KOG2569@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTransmembrane receptor, eukaryota
Ec32 orthologEc-01_006810.1
Exons7
Model size1788
Cds size1083
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930141.514986-UTR-H-elongata_contig203:14457..144721622930141.514986-UTR-H-elongata_contig203:14457..14472Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig203 14458..14472 +
1691679296.8454168-UTR-H-elongata_contig203:14457..144721691679296.8454168-UTR-H-elongata_contig203:14457..14472Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig203 14458..14472 +
1622930141.684064-UTR-H-elongata_contig203:17558..182481622930141.684064-UTR-H-elongata_contig203:17558..18248Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig203 17559..18248 +
1691679296.9402494-UTR-H-elongata_contig203:17558..182481691679296.9402494-UTR-H-elongata_contig203:17558..18248Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig203 17559..18248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930141.5361533-CDS-H-elongata_contig203:14472..145891622930141.5361533-CDS-H-elongata_contig203:14472..14589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 14473..14589 +
1691679296.8603199-CDS-H-elongata_contig203:14472..145891691679296.8603199-CDS-H-elongata_contig203:14472..14589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 14473..14589 +
1622930141.555299-CDS-H-elongata_contig203:15197..153861622930141.555299-CDS-H-elongata_contig203:15197..15386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 15198..15386 +
1691679296.8708982-CDS-H-elongata_contig203:15197..153861691679296.8708982-CDS-H-elongata_contig203:15197..15386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 15198..15386 +
1622930141.6044695-CDS-H-elongata_contig203:15752..159261622930141.6044695-CDS-H-elongata_contig203:15752..15926Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 15753..15926 +
1691679296.8841941-CDS-H-elongata_contig203:15752..159261691679296.8841941-CDS-H-elongata_contig203:15752..15926Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 15753..15926 +
1622930141.6241932-CDS-H-elongata_contig203:16174..163241622930141.6241932-CDS-H-elongata_contig203:16174..16324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 16175..16324 +
1691679296.8944025-CDS-H-elongata_contig203:16174..163241691679296.8944025-CDS-H-elongata_contig203:16174..16324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 16175..16324 +
1622930141.6387637-CDS-H-elongata_contig203:16610..167901622930141.6387637-CDS-H-elongata_contig203:16610..16790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 16611..16790 +
1691679296.9036458-CDS-H-elongata_contig203:16610..167901691679296.9036458-CDS-H-elongata_contig203:16610..16790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 16611..16790 +
1622930141.6548917-CDS-H-elongata_contig203:17040..171361622930141.6548917-CDS-H-elongata_contig203:17040..17136Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 17041..17136 +
1691679296.91307-CDS-H-elongata_contig203:17040..171361691679296.91307-CDS-H-elongata_contig203:17040..17136Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 17041..17136 +
1622930141.672277-CDS-H-elongata_contig203:17381..175581622930141.672277-CDS-H-elongata_contig203:17381..17558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 17382..17558 +
1691679296.9253623-CDS-H-elongata_contig203:17381..175581691679296.9253623-CDS-H-elongata_contig203:17381..17558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig203 17382..17558 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig203.5760.1prot_H-elongata_contig203.5760.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig203 14473..17558 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig203.5760.1

>prot_H-elongata_contig203.5760.1 ID=prot_H-elongata_contig203.5760.1|Name=mRNA_H-elongata_contig203.5760.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp
MVVVGESTNGPWFEYLTSRDLDEEDPPPVCVAPSTARFEVTESASFNMSV
VLHDLYSAYLLVCRHGEEFNGNVTSTFINLDPEGDLTQHLPIELSMLPSL
YTVMAVVYVGFTGAWVGEMARLRLATHLRQHVLPVHYLCLICILMKMIET
ILVATYYHRQSKEGQNQDNLRTVAIFCTDVYEILFLLTLLLISLGWGFIR
PSLRFKESWLVAFTIGFYACVTLMESSCDTSEMAWCDALSLMAYAISSLI
MLSTVVAINFNISHIRFCIQLPWTSSSALEYLKLSRYLSLRVTFLAYLLL
PTALMVVNSTILSWEYEWIFYGMKEFITMMILAQLGTTFAPFDPWLLTRA
FDHSLEQEHS*
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mRNA from alignment at H-elongata_contig203:14458..18248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig203.5760.1 ID=mRNA_H-elongata_contig203.5760.1|Name=mRNA_H-elongata_contig203.5760.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3791bp|location=Sequence derived from alignment at H-elongata_contig203:14458..18248+ (Himanthalia elongata Himel1 dioecious)
AGTGCGGCTTATTACATGGTGGTCGTGGGCGAAAGCACCAACGGGCCATG GTTCGAGTATCTGACCAGCAGAGACCTGGACGAGGAGGATCCACCCCCCG TGTGCGTCGCTCCTTCAACTGCCCGATTTGAGGTGACAGACAAGACGGCC CGTGATGCAATGCTCACTTCCAACGAGAAGCTTTGATGCAGCGCTTAAGA GTAGTGGAGGGGGCGGGGGTAGGGTTCTTCTGTCCGACCCTTCCAGAAAA ATTAATAGCATCTTTTTACGTTGGCTCAGATGATGTTGAGGGGGTTTCGT TGTTTTTGGGGGTTTTCAAAAACAAATGCGGACCATGGTGGGTGGGTCTT CACTCCGCGGTCGTTTTTTGTCGACGCGCAATGCAGTTCATAAGAGTTGA ACGTCGTCGACTGACGACTCTAAAACAATCCCTCTGCGAGCACTGTACCG TGGATACAGCCAAGTTTTGTTTGAGCCTAAATCGGGACGATTCGATCCAT CCAGCGCGAACGCGAAGGAGGGCACGCTGCCCCGCGGAAGGATTTACGTC ATCACGTCAGCCGTAGCAGGCCATGGCATGCGGATCGGCGGAAGCGTTTT GGCGGTGGCCTGTCTGTTTATCTCTCTTCCCGTCTGTATGTCCTCTTTGC CCTCTCTGTTTGTCTTTTAGTCTGTTCGTTTGTCACAGCTGCGCAGCTCT TTCCGAGTCTTCCCTCGCGCGCTTGATCGGCCCGCGGCAGGTGACGGAGT CCGCTTCGTTCAACATGTCGGTGGTGCTGCACGACTTGTACAGCGCTTAT CTGCTGGTGTGCCGTCACGGAGAAGAATTCAACGGAAACGTGACCTCGAC GTTCATCAACTTGGATCCAGAGGGGGACCTAACTCAGCACTTGCCCATCG AGCTGTCCATGCTCCCATCGCTATACACGGTGGGTCAATTCCTCCCCTTG CGCGTCCGCGTCGTTTGTGGTGTGTGCGTCGCGTCTGCATAGGCAAGCCA GGAAAAAGTTCCCTCATTTCGTGTCGAAAAAATTGACACAAGAGGAGAAA ACTTCCAGAACGGCAAAATTCTCTGCCAGCGTTTCGGCTAAATACTTCGA TCGGCCGCACGGCGCGCGAAGTGTCATAATTGGTTGCTCCCACTTCTCCT CGACACACACACACACAGATACAGATACACATGCCGACGCTCAGCCCGCG GAACCTGCCTGCCTGCCTGCCTACACACCACAGTTGTTCTCTAGCATCTA TTAGTTGCTCGCGGTCATGATCGTCATCGTTGTGCACCCGTGCAGGTGAT GGCGGTGGTTTACGTGGGGTTCACCGGTGCGTGGGTGGGCGAGATGGCCC GCCTTCGTCTCGCGACCCACCTTCGCCAGCACGTGCTACCGGTGCACTAC CTGTGCTTGATCTGCATACTGATGAAGATGATAGAGACAATTCTTGTGGC GACTTACTATCATCGGCAGGTATGCGAGAGTTTGATTGAAGAGCGTCGTA TGTGTGTTCTGTGGGCGTATTTCTACTTCAGAGAGAATCGGCGGTTACGG TATATCACCCTACGTTGTAATTCCGTAAACCCTCGGATCTCTCCTTTGTC GGTCCTTACTTGGACACGCCTGGAAGGCAAGCTCTCCCTTGACCCACCGG AACCCTCACCTGACCAAACGTCGGTTCCCTGTATTGCGCGCCTGATGTGG TGAACCCGTTCGTGCAGAGCAAGGAAGGACAGAACCAGGACAACCTACGC ACCGTTGCCATCTTTTGCACAGACGTTTACGAAATATTGTTCCTGCTCAC ACTGTTGTTGATCAGTCTCGGGTGGGGCTTTATTCGGCCGTCTCTACGCT TCAAGGAAAGCTGGCTGGTGGGTTGAATAACATGCCAGCGTATTTTCTTT TGTTGCCCGCGCAAACGATTTTTCTCCATGCCGATGCGGGGTGTGCTCGT CTGTCCGTGCTAGTTCCTTCGCGTCGTGAAAGGTACACGCGCTAGCGCTT CCTTCCACTGGACATCGCTCGTGATGCGCTTCAACCGCAGTATTGGATAT GGACGAATGATTAGGTGGCGCGCGATCTCCCTGAGTGGTTGTTGCCATGC CTTCGCTGCCTCCCTCACGTGGCACCATTCTTCGCTCCCGCTTCCTTTTC CAGGTGGCATTCACGATTGGGTTCTACGCATGTGTGACGTTGATGGAATC CAGCTGCGATACCTCCGAGATGGCGTGGTGCGATGCTCTTAGCCTCATGG CGTATGCCATCAGCAGCCTGATCATGCTTAGTACCGTCGTGGCCATCAAC TTCAACATCTCTCACATCCGCTTCTGTATACAGGTGTGATGCGTGAGTGA GAACTGCTGCGGAGGGTGGAGTCTGGCGAGAGGTAACGATGCGCATGGCC TGATTTGTCCTCGTGCTGGGGTGTCCCTGCGTCATATCTTAACCTTAAGA AGTCACAAGGGCCGAGGCTTGGTGGGTGCACGACCCAGATTTAATTTTAG TGGCAATCGTGAGCTCAATCTTCGCCCCTTTAAAATTACGCACCGTCGGC GTCCCATGCTCCGCATCCTCGTGTCGCACGAAGCTCCCATGGACAAGCAG CAGCGCCCTTGAGTACCTCAAGCTGAGTCGGTATTTGTCGTTAAGGGTGA CATTCCTCGCATACCTGCTGCTACCTACGGTGAGTAAAAGCGAGCGGCAG GCGTGTATCCGCAACCGCATATACGGGTGGAGCTCCCACCACTGTACCGC CCTGGCGAGCGCGGTCACCGGTACTAGCCTTGCTGCCAAAGGACGCATCT TCCCATGAACTGCCGCGAGCATGTCTCGTAAAACCTGGTAGCCACATACG CTTATGACGTTTTCTTGGACCTAATCCCTTGCACTCGCCGCGGTACATCA TTCCTTTTGCCTTTTCTGATCCAGGCGCTTATGGTGGTGAACAGTACCAT TCTGTCGTGGGAGTACGAGTGGATATTCTATGGTATGAAAGAGTTCATTA CGATGATGATCTTAGCTCAACTTGGGACAACATTCGCCCCCTTCGATCCT TGGTTACTTACCCGTGCCTTCGACCATAGCCTAGAGCAAGAACATTCTTG AAAACCCTTTCTTAATACCAGAAGCCATAATGCTTCAATGTTTTTTTGTT ACTTGGTTACGAGATATGTCTTGCTTGAAGGTTCGATCGTATAACACGGA CCGTGGTTCCTATGAGAGGAAATAAGTTCTGTCCTCTCCCCCCCTGTTGT TTTGTGAGTCTTAAGTCATGATTTGGCGACAAGTCTAAAATGTCTCCAGA GCTTCCAGATTTACTGAATATTGTTTGTACGCATTCCAAGCGAAATCAGC GCGATTACTGATTGTCTACCTCTAGCTGTATCGAATAAAAAAGATGAAGT ACTGTAGAAAACTACGCGCGTATTTTTTTGCCAATGAGTTTCTGCTCGTG AATCAGCTTGCGAAAGAACTGCTCCGTGTGGAAAGTTATTGATATTTTTT ATGTAAGTCGTTAACTAACTAGAAAGCCAATTCACAAACGCATGATGGGG TTATCTTGATAATTGTGTTCTTGTTCTTTTCCCGTCTCTGGGAGCGAAAT GCCCGAACCGGCACTTTCTAAAAGGCACCGGTACTCGAACGGTAAACCCC AATATATTAAAAGTAATATATACTATTCATAGGGAGTCTTGAGCTCGACA TTTCTCTCTCTATAGACAGATATCGTTTGCCAAGTTCAAAAACTTGAGGC GTGATGTCATTCATAGGTCCGAGAGCTTTATCAAAGTTAGG
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Coding sequence (CDS) from alignment at H-elongata_contig203:14458..18248+

>mRNA_H-elongata_contig203.5760.1 ID=mRNA_H-elongata_contig203.5760.1|Name=mRNA_H-elongata_contig203.5760.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2166bp|location=Sequence derived from alignment at H-elongata_contig203:14458..18248+ (Himanthalia elongata Himel1 dioecious)
ATGGTGGTCGTGGGCGAAAGCACCAACGGGCCATGGTTCGAGTATCTGAC
CAGCAGAGACCTGGACGAGGAGGATCCACCCCCCGTGTGCGTCGCTCCTT
CAACTGCCCGATTTGAGATGGTGGTCGTGGGCGAAAGCACCAACGGGCCA
TGGTTCGAGTATCTGACCAGCAGAGACCTGGACGAGGAGGATCCACCCCC
CGTGTGCGTCGCTCCTTCAACTGCCCGATTTGAGGTGACGGAGTCCGCTT
CGTTCAACATGTCGGTGGTGCTGCACGACTTGTACAGCGCTTATCTGCTG
GTGTGCCGTCACGGAGAAGAATTCAACGGAAACGTGACCTCGACGTTCAT
CAACTTGGATCCAGAGGGGGACCTAACTCAGCACTTGCCCATCGAGCTGT
CCATGCTCCCATCGCTATACACGGTGACGGAGTCCGCTTCGTTCAACATG
TCGGTGGTGCTGCACGACTTGTACAGCGCTTATCTGCTGGTGTGCCGTCA
CGGAGAAGAATTCAACGGAAACGTGACCTCGACGTTCATCAACTTGGATC
CAGAGGGGGACCTAACTCAGCACTTGCCCATCGAGCTGTCCATGCTCCCA
TCGCTATACACGGTGATGGCGGTGGTTTACGTGGGGTTCACCGGTGCGTG
GGTGGGCGAGATGGCCCGCCTTCGTCTCGCGACCCACCTTCGCCAGCACG
TGCTACCGGTGCACTACCTGTGCTTGATCTGCATACTGATGAAGATGATA
GAGACAATTCTTGTGGCGACTTACTATCATCGGCAGGTGATGGCGGTGGT
TTACGTGGGGTTCACCGGTGCGTGGGTGGGCGAGATGGCCCGCCTTCGTC
TCGCGACCCACCTTCGCCAGCACGTGCTACCGGTGCACTACCTGTGCTTG
ATCTGCATACTGATGAAGATGATAGAGACAATTCTTGTGGCGACTTACTA
TCATCGGCAGAGCAAGGAAGGACAGAACCAGGACAACCTACGCACCGTTG
CCATCTTTTGCACAGACGTTTACGAAATATTGTTCCTGCTCACACTGTTG
TTGATCAGTCTCGGGTGGGGCTTTATTCGGCCGTCTCTACGCTTCAAGGA
AAGCTGGCTGAGCAAGGAAGGACAGAACCAGGACAACCTACGCACCGTTG
CCATCTTTTGCACAGACGTTTACGAAATATTGTTCCTGCTCACACTGTTG
TTGATCAGTCTCGGGTGGGGCTTTATTCGGCCGTCTCTACGCTTCAAGGA
AAGCTGGCTGGTGGCATTCACGATTGGGTTCTACGCATGTGTGACGTTGA
TGGAATCCAGCTGCGATACCTCCGAGATGGCGTGGTGCGATGCTCTTAGC
CTCATGGCGTATGCCATCAGCAGCCTGATCATGCTTAGTACCGTCGTGGC
CATCAACTTCAACATCTCTCACATCCGCTTCTGTATACAGGTGGCATTCA
CGATTGGGTTCTACGCATGTGTGACGTTGATGGAATCCAGCTGCGATACC
TCCGAGATGGCGTGGTGCGATGCTCTTAGCCTCATGGCGTATGCCATCAG
CAGCCTGATCATGCTTAGTACCGTCGTGGCCATCAACTTCAACATCTCTC
ACATCCGCTTCTGTATACAGCTCCCATGGACAAGCAGCAGCGCCCTTGAG
TACCTCAAGCTGAGTCGGTATTTGTCGTTAAGGGTGACATTCCTCGCATA
CCTGCTGCTACCTACGCTCCCATGGACAAGCAGCAGCGCCCTTGAGTACC
TCAAGCTGAGTCGGTATTTGTCGTTAAGGGTGACATTCCTCGCATACCTG
CTGCTACCTACGGCGCTTATGGTGGTGAACAGTACCATTCTGTCGTGGGA
GTACGAGTGGATATTCTATGGTATGAAAGAGTTCATTACGATGATGATCT
TAGCTCAACTTGGGACAACATTCGCCCCCTTCGATCCTTGGTTACTTACC
CGTGCCTTCGACCATAGCCTAGAGCAAGAACATTCTTGAGCGCTTATGGT
GGTGAACAGTACCATTCTGTCGTGGGAGTACGAGTGGATATTCTATGGTA
TGAAAGAGTTCATTACGATGATGATCTTAGCTCAACTTGGGACAACATTC
GCCCCCTTCGATCCTTGGTTACTTACCCGTGCCTTCGACCATAGCCTAGA
GCAAGAACATTCTTGA
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