mRNA_H-elongata_contig20288.5752.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: D8LNP1_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP1_ECTSI) HSP 1 Score: 170 bits (430), Expect = 3.180e-49 Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LDAGRIGIAGQALGIAAAS+DCAVKYS ER+SFG+PI LYAIQ SKISEMS KLDAARLLTWKAA ARD+GEN+TKEAAMAKLFASETATFCSHAAIQ+LGGMG
Sbjct: 266 MGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGQPICGLYAIQ-SKISEMSMKLDAARLLTWKAAAARDAGENYTKEAAMAKLFASETATFCSHAAIQVLGGMG 372
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A812RDM2_SYMMI (ACADS protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RDM2_SYMMI) HSP 1 Score: 147 bits (370), Expect = 1.050e-40 Identity = 81/108 (75.00%), Postives = 94/108 (87.04%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M++LD GRIGIAGQALGIA+AS+DCAVKYS ER++FGK I ++YAIQ+ KI+EMST+LDAARLLTWKAA D G F K+AA AKLFASETATFCSH AIQ+LGGMG
Sbjct: 222 MSTLDGGRIGIAGQALGIASASMDCAVKYSLERKAFGKSICTMYAIQE-KIAEMSTRLDAARLLTWKAAMLADRGLPFIKDAAQAKLFASETATFCSHQAIQVLGGMG 328
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A7S4FFB3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FFB3_9EUGL) HSP 1 Score: 147 bits (372), Expect = 1.740e-40 Identity = 80/108 (74.07%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LD GRIGIAGQALGIA AS+DCA KY+ +RE+FGKPISSLYAIQ K+SEM KL +ARLLTW AA A+D G++F+KEAAMAKL ASE ATFCSH AIQ+LGGMG
Sbjct: 270 MTTLDGGRIGIAGQALGIAQASIDCAAKYALDREAFGKPISSLYAIQL-KLSEMECKLQSARLLTWNAAMAKDKGDDFSKEAAMAKLVASEAATFCSHRAIQVLGGMG 376
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A836C965_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C965_9STRA) HSP 1 Score: 139 bits (351), Expect = 8.000e-38 Identity = 73/108 (67.59%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LD GRIG+A QALGIA AS+DCAVKY+ ER++FG PISSLYAIQ K+S+M+ ++DAARLLTW+AA +D+G ++T+EAA AKL ASE ATFC+H AIQ+LGGMG
Sbjct: 227 MGTLDTGRIGVAAQALGIAQASLDCAVKYATERKAFGTPISSLYAIQH-KLSDMANRVDAARLLTWRAAATKDAGRSYTREAAQAKLVASEAATFCAHQAIQVLGGMG 333
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A6V7JKG3_9HYME (Uncharacterized protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JKG3_9HYME) HSP 1 Score: 138 bits (347), Expect = 1.520e-37 Identity = 77/108 (71.30%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LDAGRIGIA QALGIA AS+DCAV+YS +R +FGKPI L AIQQ KI++MS +L++ARLLTW+AAY +D+ + FTKEAAMAKL ASE ATFCSH A+QILGGMG
Sbjct: 194 MMTLDAGRIGIASQALGIAQASLDCAVEYSAKRLAFGKPILKLQAIQQ-KIADMSLRLESARLLTWRAAYLKDTAKPFTKEAAMAKLAASEAATFCSHQAMQILGGMG 300
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A7S1NP91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NP91_9EUGL) HSP 1 Score: 139 bits (351), Expect = 2.010e-37 Identity = 79/108 (73.15%), Postives = 89/108 (82.41%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LD GRIGIAGQALGIA ASVDCA KY+ ER++FG PIS LYAIQ K+S+M +L AARLLTWKAA A+D E++ KEAAMAKL ASE ATFCSH AIQILGGMG
Sbjct: 270 MWTLDGGRIGIAGQALGIAQASVDCAAKYALERKAFGAPISKLYAIQL-KLSQMECRLQAARLLTWKAAIAKDRKEDYVKEAAMAKLCASEAATFCSHQAIQILGGMG 376
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: UPI001CA8F40C (short-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA8F40C) HSP 1 Score: 137 bits (345), Expect = 1.020e-36 Identity = 72/108 (66.67%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LDAGRIGIAGQALG+A AS+DCA++Y+ +R +FGKPI L IQQ K+++M+ KL++ARLLTW+AAY +D+ ++FTKEAAMAKL ASE ATFCSH IQ+LGGMG
Sbjct: 257 MMTLDAGRIGIAGQALGVAQASLDCAMEYASKRMAFGKPIMKLQVIQQ-KLADMALKLESARLLTWRAAYLKDNNQSFTKEAAMAKLAASEAATFCSHQCIQVLGGMG 363
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: UPI001C9C5595 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1 n=3 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C5595) HSP 1 Score: 137 bits (345), Expect = 1.040e-36 Identity = 75/108 (69.44%), Postives = 93/108 (86.11%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LD+GRIGIA QALGIA AS+DCAV+Y+ +R +FG PI L AIQQ KI++M+ KL++ARLLTW+AAY +D+G+ +TKEAAMAKL ASETATFCSH +IQILGGMG
Sbjct: 258 MKTLDSGRIGIASQALGIAQASLDCAVEYAAKRMAFGNPIIKLQAIQQ-KIADMAMKLESARLLTWRAAYLKDNGKPYTKEAAMAKLAASETATFCSHQSIQILGGMG 364
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A834XX50_9HYME (Uncharacterized protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834XX50_9HYME) HSP 1 Score: 137 bits (345), Expect = 1.070e-36 Identity = 77/108 (71.30%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LD+GRIGIA QALGIA AS+DCAV+Y +R SFG+PI+SL IQQ KI++MS K+++ARLLTW+AAY +DS + FTKEAAMAKL ASE ATFCSH AIQILGGMG
Sbjct: 260 MMTLDSGRIGIASQALGIAQASLDCAVEYGIKRLSFGRPITSLQLIQQ-KIADMSLKIESARLLTWRAAYLKDSHKPFTKEAAMAKLAASEAATFCSHQAIQILGGMG 366
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Match: A0A3L8DUZ4_OOCBI (Uncharacterized protein n=2 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8DUZ4_OOCBI) HSP 1 Score: 137 bits (345), Expect = 1.190e-36 Identity = 75/108 (69.44%), Postives = 93/108 (86.11%), Query Frame = 1
Query: 1 MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKISEMSTKLDAARLLTWKAAYARDSGENFTKEAAMAKLFASETATFCSHAAIQILGGMG 324
M +LDAGRIGIAGQALGIA AS+DCA++Y+ +R++FGK I L AIQQ KI++M+ KL+A+RLLTW+AA +D+G+ FTKEAAMAKL ASETATFC+H IQILGGMG
Sbjct: 266 MMALDAGRIGIAGQALGIAQASLDCAIEYAAKRQAFGKSILKLQAIQQ-KIADMALKLEASRLLTWRAAQLKDTGKPFTKEAAMAKLSASETATFCAHQCIQILGGMG 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20288.5752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20288.5752.1 >prot_H-elongata_contig20288.5752.1 ID=prot_H-elongata_contig20288.5752.1|Name=mRNA_H-elongata_contig20288.5752.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp MASLDAGRIGIAGQALGIAAASVDCAVKYSKERESFGKPISSLYAIQQSKback to top mRNA from alignment at H-elongata_contig20288:3930..5013+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20288.5752.1 ID=mRNA_H-elongata_contig20288.5752.1|Name=mRNA_H-elongata_contig20288.5752.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1084bp|location=Sequence derived from alignment at H-elongata_contig20288:3930..5013+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20288:3930..5013+ >mRNA_H-elongata_contig20288.5752.1 ID=mRNA_H-elongata_contig20288.5752.1|Name=mRNA_H-elongata_contig20288.5752.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at H-elongata_contig20288:3930..5013+ (Himanthalia elongata Himel1 dioecious)back to top |