mRNA_H-elongata_contig20279.5748.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20279.5748.1
Unique NamemRNA_H-elongata_contig20279.5748.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: D8LE28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE28_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 4.550e-134
Identity = 216/344 (62.79%), Postives = 258/344 (75.00%), Query Frame = 1
Query:  145 ILGQARSAGDPFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQL--GADDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPPPEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQVVQLVREQLEVTSRAEGNNGDVRGKESSGTGKSNSKTMSKG---------EMDC 1143
            +L QAR AGDPF AVTLY+K L   P+DT ++GEAA+L+L  GE + AKEVLARSILL P EGPDKYL MAQLHEGREAL  Y+KGL+++++QL  G      K  +AAL+QR CM +CSV ELF+TDLCFEEDAE R       CQDALD S+ YDYGGPEP +AVANL LSQ + EEA QSAEE+FRRL++CEPPP+ EFRVSLAK+L+ECS+ N  CS+KAL+VL GLMQEDDENVE+WYL AVAFNSL+P D ESAR HL  AA+MLSKIR  QE+MGEEFA+EDQV QLV+EQLE T+  E  + D    E +  G+ +  + SK          EMDC
Sbjct:   45 LLEQARKAGDPFLAVTLYQKVLEARPDDTSIMGEAADLMLHAGEPAAAKEVLARSILLGPEEGPDKYLYMAQLHEGREALGHYEKGLELLRKQLADGGGAGGTKEAEAALRQRACMAYCSVAELFMTDLCFEEDAETR-------CQDALDGSIRYDYGGPEPLNAVANLRLSQSRPEEAAQSAEEAFRRLALCEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAVAFNSLQPPDCESARAHLNTAAEMLSKIRTAQEDMGEEFAFEDQV-QLVQEQLEATALLESKD-DCEKDEDTDMGEDSKPSTSKAADVVKEGPTEMDC 379          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A835ZAV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV8_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.920e-67
Identity = 155/380 (40.79%), Postives = 204/380 (53.68%), Query Frame = 1
Query:   43 TGRKRGKRNSRGKA----VASGNTSPTFEAPPVQDVADILGQ---ARSAGDPFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGADDKELKGQDAA--------LKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSIC--------------EPPPEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEE--------------FAYEDQVVQLVREQLEVTSRA 1053
            TGR R K+N +GKA            T  A    D A+  G+      + +P  A+  YK+AL + P+D  +L EAA+LLLQ+G    AK +L+RSI +AP     K+L MAQLHEG EAL+ Y +GL +++  L                     L+Q+L    C+V EL++TDLCF  DAE         C  ALD+++ +D GGPE   A+A+L LSQG+  +A+  A+E+ RR+                  P P+  FRVS AK+LLEC+  +A C E AL VL GLMQEDDE+VE W+L   AF    P D E AR HLERAA+ML KIR   E M +E              F YE QV  LVREQL + + A
Sbjct:    3 TGRGRNKKNGKGKARRLDQRHKQQGATAAAAEQSDEAEASGEDALVHDSVEPELALKFYKRALDLCPQDPALLDEAADLLLQLGAADDAKALLSRSIEVAPDASAGKWLYMAQLHEGEEALKLYNRGLTLLEAALAQPAAXXXXXXXXSTLTSIPELRQQLSAACCAVAELYMTDLCFAPDAEA-------ACAAALDRALRHDAGGPEAHQAMAHLRLSQGRAADAVPFAKEAARRVGAALAALEGDVMGGGEGGPGPDYGFRVSAAKVLLECADADASCCEDALAVLAGLMQEDDEDVETWFLMGAAFFKQDPPDLELARAHLERAAEMLEKIR---EHMRKERRSGNRGGGSAQFVFPYEGQVA-LVREQLALVAEA 371          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A7S2CWS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWS8_9STRA)

HSP 1 Score: 178 bits (452), Expect = 9.700e-49
Identity = 111/317 (35.02%), Postives = 176/317 (55.52%), Query Frame = 1
Query:  130 QDVADILGQARSAGDPFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPD----KYLNMAQLHEGREALEFYQKGLDIMQRQLGADDKELKGQDAA----LKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYG-GPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPPPEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQVVQLVREQLEVTSRA 1053
            +D+ D   +A    +P  AV   ++A   APED  +L + AE+ + VGET  A     R+I ++     D    ++L +AQL EG  A E Y+ GL ++  +L A    +  ++ +    ++ ++C  +C+V EL+LTDLC EE AE+        CQ+AL+K+M ++     EP   +A+L LSQG + EA      ++ R+  C    + E R+S A++LLEC+   + C++ AL++L    +EDDENVE+W+L  V F    P D   A  +LERA +ML K+R    +  E F YE Q+ +LV EQ+++   A
Sbjct:   26 EDLMDRAQKAIDVCEPELAVRFMRRASEAAPEDASILDQLAEVEMGVGETERAGRAWMRAIEVSGNPDHDANAERWLYVAQLREGNGARESYEHGLRLLTARLQAMQASMVHEEGSSESDIRAQMCTAYCAVAELYLTDLCLEESAEE-------ACQNALNKAMEFNANESHEPMQGLASLRLSQGMHAEAANLMHSAYERIKSCGHAMDPELRISTARLLLECAPNVSQCADDALDLLMDSKREDDENVEIWFLMGVGFYQQSPPDLTLAYEYLERAKEMLEKVREALLQENEPFPYEVQL-RLVGEQMKLVEAA 334          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: W7UA25_9STRA (Tpr domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA25_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.840e-47
Identity = 122/348 (35.06%), Postives = 172/348 (49.43%), Query Frame = 1
Query:  106 PTFEAPPVQDVADILGQARSAGDPFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGA----------DDKE--------LKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGG-PEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPPPEQE-------------------------FRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQVVQ 1017
            PT  +   +++      A +   P  AV  Y++AL   P+ T V+    ELLL  G+   A  +  RS  LAP  G  K+L + QL EG ++L+ + KG +++Q +LGA          D KE        +  +  A+  +L  T CS+ EL+LTDLCFEEDAE R       CQ ALD+++  D GG PE   A ANL LSQ + +EA     E+ +RL  C+    +E                         FR+  AK+LLEC A N  C+++A+ VL     EDDENVEVWYL  VA++  R  D   A+ HL  A   L K+     +  +  AY +Q+ Q
Sbjct:   12 PTMASHEHEELMKRAEYALATLQPELAVKFYERALEATPDATPVMDALGELLLNTGDGERAYALFERSTKLAPDMGATKWLYLGQLSEGWKSLQHFSKGAELLQEELGARRINPCLKEPDRKEGEEVGGEGMNDEAFAIINQLVSTHCSIAELYLTDLCFEEDAEAR-------CQAALDEALRLDVGGSPEVTQACANLRLSQKRGQEASALMIETVKRLGACQQDDVEEDDEIEGEGGEGAGQEIRGLQLPTIMFRLQTAKLLLECQAYNKKCAKEAVRVLEACKCEDDENVEVWYLLGVAYSRQRKPDVGMAKAHLLHAQQALRKMEQMDGDAEKADAYGEQLSQ 352          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A1V9Z8H4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8H4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.450e-46
Identity = 107/299 (35.79%), Postives = 171/299 (57.19%), Query Frame = 1
Query:  133 DVADILGQARSAGD---PFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGA-DDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPP--PEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQV 1011
            + A +L +A    D   P  A+  ++KA  + P ++ +L    EL  ++ +  TA +   RSI LAP   P KYL  AQL +G E+ ++  +G++IM+  + A    E   +   L++++C  +CS+GEL+++DLC  +DAE +       C+  L ++M YD G PEP  A+ANL L+Q + +EA    +E+++RLS C+    P  EFR    K+L+E         E+A +VL G+MQEDDEN E+WYL    + +L   D++SA   LER   ML+KI+   ++MG +F  + Q+
Sbjct:    8 NAAALLAKAEELVDQCQPELAIKFFQKAAALEPNNSEILDAIGELATEIDDPETALQAFHRSIELAPKSNPGKYLYAAQLLQGEESEQYTLQGINIMKELMPALPGIESTDESKLLRKQVCDAYCSLGELYMSDLCDADDAEAK-------CEFYLQEAMKYDMGLPEPTQALANLRLTQQRKDEACVCLDETYKRLSACDENTMPSLEFRTFTGKLLIEVEKY-----EQACDVLEGVMQEDDENAELWYLVGSCYKALE--DYDSALEFLERCEKMLAKIK---KDMGADFHLDAQL 289          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A024UWZ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWZ5_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.100e-44
Identity = 104/303 (34.32%), Postives = 169/303 (55.78%), Query Frame = 1
Query:  118 APPVQDVADILGQARSAGD---PFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGADDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPP--PEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQV 1011
            A PV   A +L +A +  D   P  A+  ++KA  + P ++ +     EL  ++G+  TA +   +SI +AP   P KYL  AQL +G E+ +F  +G+ IM   L      L  +   LK+++C  +CS+ EL+++DLC  +DAE +       C+  L +++ YD G P+   A+AN  L Q + EEA++  +E+ +RL+ C+    P  EFR+   K+L+E         E+A  VL G+MQEDDEN E+W+L    +N+L   D+++A   LER   ML+K+   Q+++G+EF    Q+
Sbjct:    8 AKPVASAAQLLERAETLVDQLQPELAIKFFQKASALEPNNSEIYDAIGELATEIGDPQTALDAFLKSIQVAPKHNPGKYLYAAQLVQGEESEKFALQGIAIMTELLANVPAHLD-ESKLLKKQICDAYCSLTELYMSDLCDADDAEAK-------CEHYLQEALKYDLGLPDATQAMANFRLVQQRKEEAIEYLDETVKRLNACDEHTMPSLEFRIVTGKLLVEVEKY-----EQAAYVLEGVMQEDDENAELWFLVGSCYNALE--DYDTALEFLERCEAMLTKL---QKDLGDEFQLHQQL 292          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A067C582_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C582_SAPPC)

HSP 1 Score: 164 bits (414), Expect = 6.600e-44
Identity = 102/285 (35.79%), Postives = 159/285 (55.79%), Query Frame = 1
Query:  133 DVADILGQARSAGD---PFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGA-DDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPP--PEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRAT 969
            + A +L +A    D   P  A+  ++KA  + P ++ +L    EL  ++ +  TA +   RSI LAP   P KYL  AQL  G E+  +  +G+ IM+  + A    E   +   L++++C  +CS+GEL+++DLC  +DAE +       C+  L ++M YD G PEP  A+ANL L+Q + +EA    +E+++RL  C+    P  EFR    K+L+E         E+A  VL G+MQEDDEN EVW+L    + +L   D+++A   LER + MLSK++ T
Sbjct:    8 NAAALLAKAEELVDQCQPELAIKFFQKAAALEPTNSEILDAIGELATEIDDPETALQAFGRSIELAPKNNPGKYLYAAQLLVGEESERYTLQGIAIMKELMPALPGIETTDESKLLRKQVCDAYCSLGELYMSDLCDADDAEAK-------CEMYLQEAMKYDMGLPEPTQALANLRLTQQRKDEACVFLDETYKRLGACDENTMPSLEFRTFTGKLLIEVEKF-----EQAAYVLEGVMQEDDENAEVWFLVGSCYKALE--DYDTALEFLERCSAMLSKLKKT 278          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: W4GVT1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVT1_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.000e-43
Identity = 108/315 (34.29%), Postives = 173/315 (54.92%), Query Frame = 1
Query:  127 VQDVADILGQARSAGD---PFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGADDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPP--PEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQVVQLVREQLEVTSRAE 1056
            V   A +L +A +  D   P  A+  ++KA  + P ++ +     EL  ++G+  TA +   +SI +AP   P KYL  AQL +G E+ +F  +G++ M   L      L  +   LK+++C  +CS+GEL+++DLC   DAE +       C+  L +++ +D G P+   A+AN  L Q + +EA+   +E+ +RL+ C+    P  EFR+   K+L+E         E+A  VL G+MQEDDEN EVW+L    +N+L   D+++A   LER   MLSK+   Q++MG+EF   DQ +  VR  +E   + E
Sbjct:   11 VATAAQLLERAETLVDQLQPELAIKFFQKAAALEPNNSEIYDAIGELATEIGDPHTALQAFLKSIDVAPKHNPGKYLYAAQLVQGEESEKFALQGIEHMSASLAHVPDHLD-ESKLLKKQICDAYCSLGELYMSDLCDAHDAEAK-------CEHYLQEALKFDLGLPDATQAMANFRLVQQRTDEAIAFLDETLKRLNACDEHTMPSLEFRIVTGKLLVEVEKF-----EQAAYVLEGVMQEDDENAEVWFLVGSCYNALE--DYDTALEFLERCDAMLSKL---QKDMGDEFEL-DQQLDTVRSLIESIKQIE 306          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A1W0ABN5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABN5_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.230e-43
Identity = 99/276 (35.87%), Postives = 157/276 (56.88%), Query Frame = 1
Query:  175 PFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQLGA-DDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSICEPP--PEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEF 993
            P  A+  ++KA  + P  + +     EL  ++G+  TA +   RSI LAP   P K+L  AQL +G E+ ++  +G+  M+  + A    E   +   L++++C  +CS+GEL+++DLC  +DAE +       C+  L ++M YD G PEP  A+ANL L+Q + ++A    +E+++RL  C+    P  EFR    K+L+E         E+A +VL G+MQEDDEN E+W+L    + +L   D++SA   LER   MLSK++   +EMG EF
Sbjct:   25 PELAIKFFQKAAAMEPNRSEIFDAIGELATEIGDPDTAAQAFGRSIELAPKSNPGKWLYFAQLVQGEESEKYTLQGIAYMKELMPAMPGIENTDESKLLRKQICDAYCSLGELYMSDLCDLDDAEAK-------CEFYLQEAMKYDMGLPEPTQALANLRLTQQRKDDACACLDETYKRLGQCDENTMPSLEFRTFTGKMLIEVEKF-----EQACDVLEGVMQEDDENPELWFLVGTCYKALE--DYDSALEFLERCESMLSKLK---KEMGNEF 283          
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Match: A0A2D4BGB7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGB7_PYTIN)

HSP 1 Score: 163 bits (413), Expect = 3.220e-43
Identity = 102/300 (34.00%), Postives = 174/300 (58.00%), Query Frame = 1
Query:  139 ADILGQARSAGD---PFHAVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEGPDKYLNMAQLHEGREALEFYQKGLDIMQRQL---GADDKELKGQDAALKQRLCMTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPHAVANLLLSQGKYEEAMQSAEESFRRLSI-CEP--PPEQEFRVSLAKILLECSATNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLERAADMLSKIRATQEEMGEEFAYEDQV 1011
            A+++ +A S  D   P  AV  ++KAL   P +T++L    EL  ++     A  V  +SI LAPA+ P K+L +AQL  G +A+++  +G+  +Q++L    A+ +E +     +K+++C  +CS+GEL++TDLC E+DAE R       C++    ++ +D G PEP  A+ANL L+Q + +EA+   EE++RRL+  C+    P  EFR+   K+L+E         E+A +VL G+MQEDDEN E+W+L    + ++   D   +    ++  +ML K++   +E+ +EF  + Q+
Sbjct:   15 AELIAKAESLVDQCQPELAVKFFEKALLKEPTNTMLLDTIGELSTELDNPERALAVFQQSIQLAPAQNPSKWLYLAQLVGGEDAVKYTTQGITYLQQELQGVAAESQEAQ----VIKKQICXAYCSLGELYMTDLCDEDDAEAR-------CENYFQSALQFDIGTPEPTQALANLRLTQQRRDEAVPLLEETYRRLAENCDENSTPSLEFRIFTGKLLIEVEKY-----EEACDVLEGVMQEDDENAELWFLVGTCYRAMD--DLSLSLEFFQKCEEMLQKLK---KELRDEFHLDAQL 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20279.5748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE28_ECTSI4.550e-13462.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAV8_9STRA3.920e-6740.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CWS8_9STRA9.700e-4935.02Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7UA25_9STRA1.840e-4735.06Tpr domain protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A1V9Z8H4_9STRA1.450e-4635.79Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024UWZ5_9STRA5.100e-4434.32Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A067C582_SAPPC6.600e-4435.79Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
W4GVT1_9STRA1.000e-4334.29Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A1W0ABN5_9STRA1.230e-4335.87Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2D4BGB7_PYTIN3.220e-4334.00Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20279contigH-elongata_contig20279:2476..6406 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score398.7
Seed ortholog evalue3.1e-108
Seed eggNOG ortholog2880.D8LE28
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.ribosome biogenesis
EggNOG OGs28JWA@1,2QSAH@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-05_004280.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size1233
Cds size1116
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20279.5748.1prot_H-elongata_contig20279.5748.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20279 2509..6322 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930140.2241306-UTR-H-elongata_contig20279:2475..25081622930140.2241306-UTR-H-elongata_contig20279:2475..2508Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20279 2476..2508 +
1691679296.414279-UTR-H-elongata_contig20279:2475..25081691679296.414279-UTR-H-elongata_contig20279:2475..2508Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20279 2476..2508 +
1622930140.4384518-UTR-H-elongata_contig20279:6322..64061622930140.4384518-UTR-H-elongata_contig20279:6322..6406Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20279 6323..6406 +
1691679296.5043223-UTR-H-elongata_contig20279:6322..64061691679296.5043223-UTR-H-elongata_contig20279:6322..6406Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20279 6323..6406 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930140.2930622-CDS-H-elongata_contig20279:2508..25931622930140.2930622-CDS-H-elongata_contig20279:2508..2593Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 2509..2593 +
1691679296.4260383-CDS-H-elongata_contig20279:2508..25931691679296.4260383-CDS-H-elongata_contig20279:2508..2593Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 2509..2593 +
1622930140.3249812-CDS-H-elongata_contig20279:2702..28781622930140.3249812-CDS-H-elongata_contig20279:2702..2878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 2703..2878 +
1691679296.435514-CDS-H-elongata_contig20279:2702..28781691679296.435514-CDS-H-elongata_contig20279:2702..2878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 2703..2878 +
1622930140.341924-CDS-H-elongata_contig20279:3380..36391622930140.341924-CDS-H-elongata_contig20279:3380..3639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 3381..3639 +
1691679296.4448943-CDS-H-elongata_contig20279:3380..36391691679296.4448943-CDS-H-elongata_contig20279:3380..3639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 3381..3639 +
1622930140.360216-CDS-H-elongata_contig20279:3909..40771622930140.360216-CDS-H-elongata_contig20279:3909..4077Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 3910..4077 +
1691679296.4542634-CDS-H-elongata_contig20279:3909..40771691679296.4542634-CDS-H-elongata_contig20279:3909..4077Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 3910..4077 +
1622930140.3780928-CDS-H-elongata_contig20279:4860..49461622930140.3780928-CDS-H-elongata_contig20279:4860..4946Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 4861..4946 +
1691679296.4634717-CDS-H-elongata_contig20279:4860..49461691679296.4634717-CDS-H-elongata_contig20279:4860..4946Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 4861..4946 +
1622930140.3926177-CDS-H-elongata_contig20279:5274..53871622930140.3926177-CDS-H-elongata_contig20279:5274..5387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 5275..5387 +
1691679296.472464-CDS-H-elongata_contig20279:5274..53871691679296.472464-CDS-H-elongata_contig20279:5274..5387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 5275..5387 +
1622930140.4071841-CDS-H-elongata_contig20279:5797..58881622930140.4071841-CDS-H-elongata_contig20279:5797..5888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 5798..5888 +
1691679296.482089-CDS-H-elongata_contig20279:5797..58881691679296.482089-CDS-H-elongata_contig20279:5797..5888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 5798..5888 +
1622930140.4257824-CDS-H-elongata_contig20279:6184..63221622930140.4257824-CDS-H-elongata_contig20279:6184..6322Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 6185..6322 +
1691679296.492223-CDS-H-elongata_contig20279:6184..63221691679296.492223-CDS-H-elongata_contig20279:6184..6322Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20279 6185..6322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20279.5748.1

>prot_H-elongata_contig20279.5748.1 ID=prot_H-elongata_contig20279.5748.1|Name=mRNA_H-elongata_contig20279.5748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp
MAKTGRKRGKRNSRGKAVASGNTSPTFEAPPVQDVADILGQARSAGDPFH
AVTLYKKALRVAPEDTIVLGEAAELLLQVGETSTAKEVLARSILLAPAEG
PDKYLNMAQLHEGREALEFYQKGLDIMQRQLGADDKELKGQDAALKQRLC
MTFCSVGELFLTDLCFEEDAEKRSPFTGYVCQDALDKSMMYDYGGPEPPH
AVANLLLSQGKYEEAMQSAEESFRRLSICEPPPEQEFRVSLAKILLECSA
TNAVCSEKALEVLGGLMQEDDENVEVWYLTAVAFNSLRPADFESARVHLE
RAADMLSKIRATQEEMGEEFAYEDQVVQLVREQLEVTSRAEGNNGDVRGK
ESSGTGKSNSKTMSKGEMDCT*
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mRNA from alignment at H-elongata_contig20279:2476..6406+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20279.5748.1 ID=mRNA_H-elongata_contig20279.5748.1|Name=mRNA_H-elongata_contig20279.5748.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3931bp|location=Sequence derived from alignment at H-elongata_contig20279:2476..6406+ (Himanthalia elongata Himel1 dioecious)
CCTACATTGCCCCAGTGCAAATTACCGAATAAGATGGCCAAAACGGGTCG GAAAAGGGGAAAGCGCAACAGCCGCGGAAAGGCAGTAGCTAGTGGCAATA CTTCACCTACTTTTGAAGGTATATATCGTCCGGCGTTGTTGGTGCATCAT ATGTGCGGTTGGTACAAATAGAAGATTTAACTCCACTCCCGCCCGTCTCC AACTTTCCCCGCCTGACTGCTGCACAGCGCCTCCAGTACAAGATGTTGCT GATATTTTAGGACAGGCGCGTTCCGCAGGCGATCCATTCCACGCCGTGAC TTTGTACAAAAAGGCTCTCCGGGTGGCACCTGAAGACACGATTGTCCTGG GAGAGGCAGCAGAACTTTTGCTACAGGTTGGGGAGACGTCCACGGCAAAA GAGGTACGTAAGGACTAGAGAATGTACGGTATCCCCACGATGTTTCTATT AATAGTATCTAAACTTATACAATCCTGACCCACACCCATGGTATCGGCTG AAGCTTCGAGATTTATTTTCGTTTCATGATATATAGCTTCGGCTAGCCAG GTTCCACGGGAACGCGTGGAAGCCTTATCTTTCTTGTAAAATATATGAAC TCATTCAAACCCTTCGAACATCCACACTTTCATTACATCATGAGAGGTGA AGTCCAGGGACCAACTATCAAGTATGTATAGCATATTTTGACTCAACACA AAGACTGCGAAGTGATCGTTCGATTCCATGATTTCTCGAATTGCACAAAT TATCACCGTCGAAGATGGCGTTTTCTGCTCTTCGATACAGGCAGTCGTAG CAGTGCACGAGTCTGAAACGGGTTGTCAGTAAATATGGAAAGAGGGGAAG GGTCTGTTCACCCGAATTGAATGATACAAATCGATCAATACGTTCCATTG GTCAGGTTTTGGCTCGAAGCATTTTGCTGGCACCGGCGGAAGGACCAGAC AAGTACTTGAACATGGCGCAGCTGCATGAAGGGCGAGAAGCTCTAGAGTT CTACCAGAAAGGACTGGATATCATGCAGAGGCAGCTCGGCGCCGATGATA AAGAATTGAAAGGGCAAGATGCAGCTCTGAAGCAGCGGCTATGTATGACG TTTTGCAGTGTGGGAGAGCTCTTCCTGACAGACTTGTGCTTCGAGGAAGA CGCGGAGAAACGGTGTCAGGCATGTCAATCGACCACGTGTTTCCTAGAGC ACGAGAATTATGATTGAAGGAAAACCTGGCGTGCCGGCGGCATTTTGAAG TTTCACCTGATATCTGTAAAAAAATGTTGAGGAAGTCTCTTCGGCATCAT TGGTTTCCGAGATGAGACTATATAGAAGTCATTTTTCTATTATTTATCCA CTGAGAACCTAACTTGAGGTATGATGCATATGAGGGCCCTTTAAACGAGT CGATACGCTGGGCCTTACTCTTGACTCACAGGAGCCCCTTTTACCGGTTA TGTTTGCCAGGATGCCTTGGATAAAAGCATGATGTACGATTACGGTGGGC CGGAGCCACCACATGCTGTGGCCAACCTCCTCCTGAGTCAAGGCAAATAC GAGGAAGCGATGCAATCAGCGGAAGAATCTTTTCGACGTCTGAGTATTTG TGGTACGTTGAGTATGTGTATGTATGTATATTTATGAAATTGCACATAAC CGCGCAATCCGGCCCTGTCATCCTAGTCATATCATCACATATAGCAGAGT AAGATCAACCGGATTTGGTTGCCTTCTGCTCGTGGTCAGCGGAACAGGGA AAATAATTTCCCTCTGTCCCTGTTCGCGCCTGAGAATTTGGTCTCGCGAG ACGGATTCAGCATTCCCGTCCCGTCCCGCGTCAGCCTGTTCATTTTCTCA ACCCAGGCTAAATCTGGTACGTACTCTCGGGATCCTCTCGTTTTCTGCGA CGGCGTCCATCTCTACCGTCAACCCTACCGTCAACCGCCATCGGACCAAT CCCGATTTCATCAGGTCACGCAATCGCGTACCGATGGCGTTAACTACCGA GAGTCCGCCAGCACTGAGCCAATAGACCTCAAGGTAGCTTGAGTAACGGG TGCAGCCTATTGAGGTAACCCCATGGACCAATTATTGGACGCCTCTCTTT TCCCACACCCACTATGGGTAGAGTAGGCATGACGGTTTGCAGAGGCAGTA ACTCCGCGTGTTTCACGTGGCATGCTACGGTGTTGTAGACACAGGGCGCA CTGCACATTGATACTGATATGCTGAGGTATCCGATGTTAAGTACGCTTGA ATTGTCAGTGTGATGAATGTTGGAGGCAGGCTGTTAATAGTAAAATGTAT CTCGCTGTTCGTGGGCTGAGCGAAGTGGTCCCGTTAACTGTCTTGTGAGT GACATTGCAACATCGCAATTTGACGTATGCTGCAGAACCTCCTCCGGAAC AGGAGTTTCGCGTGTCACTAGCGAAAATATTGCTAGAGTGCTCTGCAACC AACGCTGTATGTTCCGAAAAGGTGGGTGATATGAGACGTGAGTAACTCTA CGTTTGTTTATTTGACTCACTACATATTGATTTGGCTAAAGCATTAAAGC ATTAGTAGCTTTGCTCTGTGCAAAGTGTTCGTTTGGCAGGAAAGCGTCGA TCGAGCTATTATTAGTGTGTGAGATGCTTACATGTGATGGGTTACAGCGT GGTCCCCGACATGCTTCATAAGTTTCCCGATCGAAACCACACAGCACACA TATCATGAGTTTCCCGATCGAAACCACACAGCACACATATCTGAGGGGAT CTCCTTCGACACTAATCTTGCTTTATAATGTGTAACTATATCCTAGCAGG CTCTGGAGGTGTTGGGCGGATTGATGCAAGAAGATGACGAGAATGTTGAA GTTTGGTATCTCACAGCTGTTGCCTTCAACAGCCTACGACCTGCCGACTT CGAGAGCGCAAGGTGTGTGAGCAACCATACGGCAGGGTGGAGCGGCTCCG GGTTTTAGAGAGGAAAATCAAAATAATATCCCTCCCGGGGATTCAAACCG TAGATGTTCAGATGGGATGTATATCACCGTAGATTAGGGGATGAGTACGT TTATTCCCCTGACGGGTGAAGGGGACCAATTTAACCCATCCCACCCCCGA AACGGGAATGCCTAAACAATTCCACATTTCCCTTCGCCTAGCGTTGGAAG GTCACTACACTAATCTTCGGGGTTAGTGAGTATGTGAGTTCTCTAGCAAC TGTCTTCATCCTACATTTCGCACAAGCTTGATATATTTACAATAGCCGAG CATGGAAGTAACGATTTTTGGAGGACTAAGCCAGATGTTCCTCTGTGATC ATGTTTGCGAATTATTTCGCAGGGTCCACTTGGAAAGGGCCGCCGACATG CTCTCCAAGATCAGAGCAACCCAAGAGGAGATGGGAGAAGAGTTTGCTTA CGAAGATCAGGTAGTTAATTGTCCATGACTTAATCGCTGAGGAAAAGCTG TTTTGCTGAAAATATTGCGTCCTGCAGCCGAAGGCCAGACTCTAGGGTTG TTTTTCTACCTACAAATGTGTTAATCCAGTTTTTTTACATGTCCCCTTTA CCTTGACTTTGCCTTGAGGTGATGACCACACCCCTGTGGATTAGCACAGA AAGTGGGGACACAATAATGTACATCGCCAAGTATATCGTATTAAACTACC TGCTTCGTACTCATCGAAGTTTTGGGGTTGATCTGTTTCGCCCTCCTGCC GGTGTTAAGGTGCAATTGGTTCGAGAGCAGCTAGAAGTGACGTCACGTGC AGAAGGGAATAATGGGGATGTGCGCGGGAAGGAATCGAGCGGAACGGGCA AATCAAACAGTAAAACAATGTCGAAAGGGGAGATGGACTGCACGTGACAT GCGCAGGCCCCTTTTGGCGCGCTTTGCAAAGACATCACATTTGCGAAAAG ACGAACCGCTAAGCTGCTTAAAACATAAGAC
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Coding sequence (CDS) from alignment at H-elongata_contig20279:2476..6406+

>mRNA_H-elongata_contig20279.5748.1 ID=mRNA_H-elongata_contig20279.5748.1|Name=mRNA_H-elongata_contig20279.5748.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2232bp|location=Sequence derived from alignment at H-elongata_contig20279:2476..6406+ (Himanthalia elongata Himel1 dioecious)
ATGGCCAAAACGGGTCGGAAAAGGGGAAAGCGCAACAGCCGCGGAAAGGC
AGTAGCTAGTGGCAATACTTCACCTACTTTTGAAGATGGCCAAAACGGGT
CGGAAAAGGGGAAAGCGCAACAGCCGCGGAAAGGCAGTAGCTAGTGGCAA
TACTTCACCTACTTTTGAAGCGCCTCCAGTACAAGATGTTGCTGATATTT
TAGGACAGGCGCGTTCCGCAGGCGATCCATTCCACGCCGTGACTTTGTAC
AAAAAGGCTCTCCGGGTGGCACCTGAAGACACGATTGTCCTGGGAGAGGC
AGCAGAACTTTTGCTACAGGTTGGGGAGACGTCCACGGCAAAAGAGCGCC
TCCAGTACAAGATGTTGCTGATATTTTAGGACAGGCGCGTTCCGCAGGCG
ATCCATTCCACGCCGTGACTTTGTACAAAAAGGCTCTCCGGGTGGCACCT
GAAGACACGATTGTCCTGGGAGAGGCAGCAGAACTTTTGCTACAGGTTGG
GGAGACGTCCACGGCAAAAGAGGTTTTGGCTCGAAGCATTTTGCTGGCAC
CGGCGGAAGGACCAGACAAGTACTTGAACATGGCGCAGCTGCATGAAGGG
CGAGAAGCTCTAGAGTTCTACCAGAAAGGACTGGATATCATGCAGAGGCA
GCTCGGCGCCGATGATAAAGAATTGAAAGGGCAAGATGCAGCTCTGAAGC
AGCGGCTATGTATGACGTTTTGCAGTGTGGGAGAGCTCTTCCTGACAGAC
TTGTGCTTCGAGGAAGACGCGGAGAAACGGTGTTTTGGCTCGAAGCATTT
TGCTGGCACCGGCGGAAGGACCAGACAAGTACTTGAACATGGCGCAGCTG
CATGAAGGGCGAGAAGCTCTAGAGTTCTACCAGAAAGGACTGGATATCAT
GCAGAGGCAGCTCGGCGCCGATGATAAAGAATTGAAAGGGCAAGATGCAG
CTCTGAAGCAGCGGCTATGTATGACGTTTTGCAGTGTGGGAGAGCTCTTC
CTGACAGACTTGTGCTTCGAGGAAGACGCGGAGAAACGGTCCCCTTTTAC
CGGTTATGTTTGCCAGGATGCCTTGGATAAAAGCATGATGTACGATTACG
GTGGGCCGGAGCCACCACATGCTGTGGCCAACCTCCTCCTGAGTCAAGGC
AAATACGAGGAAGCGATGCAATCAGCGGAAGAATCTTTTCGACGTCTGAG
TATTTGTGCCCCTTTTACCGGTTATGTTTGCCAGGATGCCTTGGATAAAA
GCATGATGTACGATTACGGTGGGCCGGAGCCACCACATGCTGTGGCCAAC
CTCCTCCTGAGTCAAGGCAAATACGAGGAAGCGATGCAATCAGCGGAAGA
ATCTTTTCGACGTCTGAGTATTTGTGAACCTCCTCCGGAACAGGAGTTTC
GCGTGTCACTAGCGAAAATATTGCTAGAGTGCTCTGCAACCAACGCTGTA
TGTTCCGAAAAGAACCTCCTCCGGAACAGGAGTTTCGCGTGTCACTAGCG
AAAATATTGCTAGAGTGCTCTGCAACCAACGCTGTATGTTCCGAAAAGGC
TCTGGAGGTGTTGGGCGGATTGATGCAAGAAGATGACGAGAATGTTGAAG
TTTGGTATCTCACAGCTGTTGCCTTCAACAGCCTACGACCTGCCGACTTC
GAGAGCGCAAGGCTCTGGAGGTGTTGGGCGGATTGATGCAAGAAGATGAC
GAGAATGTTGAAGTTTGGTATCTCACAGCTGTTGCCTTCAACAGCCTACG
ACCTGCCGACTTCGAGAGCGCAAGGGTCCACTTGGAAAGGGCCGCCGACA
TGCTCTCCAAGATCAGAGCAACCCAAGAGGAGATGGGAGAAGAGTTTGCT
TACGAAGATCAGGTAGGTCCACTTGGAAAGGGCCGCCGACATGCTCTCCA
AGATCAGAGCAACCCAAGAGGAGATGGGAGAAGAGTTTGCTTACGAAGAT
CAGGTAGTGCAATTGGTTCGAGAGCAGCTAGAAGTGACGTCACGTGCAGA
AGGGAATAATGGGGATGTGCGCGGGAAGGAATCGAGCGGAACGGGCAAAT
CAAACAGTAAAACAATGTCGAAAGGGGAGATGGACTGCACGTGAGTGCAA
TTGGTTCGAGAGCAGCTAGAAGTGACGTCACGTGCAGAAGGGAATAATGG
GGATGTGCGCGGGAAGGAATCGAGCGGAACGGGCAAATCAAACAGTAAAA
CAATGTCGAAAGGGGAGATGGACTGCACGTGA
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