mRNA_H-elongata_contig20265.5743.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20265.5743.1
Unique NamemRNA_H-elongata_contig20265.5743.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: D8LET7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET7_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 5.470e-165
Identity = 240/316 (75.95%), Postives = 271/316 (85.76%), Query Frame = 1
Query:    1 FGRQTLASLLAGLAVAANFESAGAASNKLQISNTGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
            FG+QT+A+LLAG+  AANFESA AA NKLQ+S+T SG+RVNKDPISLLQWGLPIDCKPARQLQE +EA KLDLFQKNWSRA SNC +A++ +S NKA +LKAVGS+NEA  T ++A++D  +  L  IVQ +GAGVVLE AKLDEA PVHA IVSNVG +EAMMVP DY  KLEANIP DF  LPRLLGRA+ EFV+ KP G+KFDV GVLYDKVRL M LDG+TAPVTAGTI+DL+QRG YY N+PITRSDGFVVQTGDPDPEG+VHDFFP GS  ARKIPLEIAVTEDK PMYSVTTEDDGRGYAATKLPF+ +
Sbjct:   65 FGKQTIATLLAGVTAAANFESANAA-NKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEVVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNKAAILKAVGSSNEAGATKLMADIDMGLGALQRIVQDDGAGVVLEKAKLDEAYPVHATIVSNVGNLEAMMVPPDYTKKLEANIPGDFDSLPRLLGRASVEFVMEKPKGEKFDVAGVLYDKVRLTMVLDGFTAPVTAGTIIDLVQRG-YYKNMPITRSDGFVVQTGDPDPEGNVHDFFPPGSDTARKIPLEIAVTEDKLPMYSVTTEDDGRGYAATKLPFQAY 378          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A836CBT3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT3_9STRA)

HSP 1 Score: 300 bits (769), Expect = 9.820e-97
Identity = 156/287 (54.36%), Postives = 204/287 (71.08%), Query Frame = 1
Query:   94 SNTGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQS-EGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPG-GQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
            SNTGSG+RVNKDP SLL+ GLPI+CKP   LQE ++++K D ++K+WSRA ++C++A  ++SK +  LL AV  T +A+   +L  +   +  L  I++S EG G V E  KLD+A     ++   VG ++ +MVPADY  +LEANIPS+F  LPRLLGRAT EFVL KP  G KFDV G LYD+ +L M +DGY AP+TAG  +DL+Q+G +Y  L ITRSDGFVVQTGDPDPEG  H +      E R +PLEI V+ DK+PMYS+TTEDD RGYA+T LPF+ +
Sbjct:   52 SNTGSGSRVNKDPQSLLRQGLPINCKPVFDLQEAIDSVKYDTYRKDWSRALNDCKQAGGIVSKKRKDLLAAVRPTEKAKGEQLLQTILDKLTPLEAILKSKEGTGTVAERIKLDDAYAAQEEVADAVGSLQELMVPADYVKELEANIPSEFDKLPRLLGRATVEFVLEKPTKGDKFDVEGTLYDQAKLVMVIDGYNAPITAGCFLDLVQKG-FYKGLAITRSDGFVVQTGDPDPEGTKHGY------EDRIVPLEIFVSGDKYPMYSLTTEDDSRGYASTILPFQAY 331          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: W7TQJ8_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQJ8_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.310e-78
Identity = 133/283 (47.00%), Postives = 190/283 (67.14%), Query Frame = 1
Query:  106 SGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYL-GNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVK-PGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
            +G+RVNKD  SLL++GLPI+ K AR+LQE +E +K ++  K  +    + QRA+++++  + +LLKAV    + +   +L E++ +++ L     +  G G   E AKLD A     D    V +VE +MVPA Y      ++P +FS LP+L GRA  + VL K   G+KF++ G LYD +++ M +DG+ APVTAG  VDL+Q+G +YNN PITRSDGFVVQ GDPDP+G+VH + P GS + R IPLEI V +D+ PMY +TTEDDGRGY+AT+LPF+ +
Sbjct:  110 AGSRVNKDAESLLRYGLPINSKEARELQEAVEGVKENIRGKRLNEGKKDVQRAKSILASKREKLLKAVRPDGKERAQELLKELEGNLDELTATFAEDAGRGSEQERAKLDLAYKQQLDASRAVTEVEELMVPAGYT----VSVPEEFSNLPQLQGRAEVDMVLKKGEAGEKFEIKGKLYDSIQVKMVIDGFNAPVTAGNFVDLVQKG-FYNNRPITRSDGFVVQYGDPDPQGEVHGYVPFGSKDVRTIPLEIFVAQDESPMYGMTTEDDGRGYSATRLPFQAY 387          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A6T5MD62_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MD62_HETAK)

HSP 1 Score: 254 bits (649), Expect = 4.180e-78
Identity = 142/288 (49.31%), Postives = 190/288 (65.97%), Query Frame = 1
Query:  100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQS-EGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVK-PGGQ--KFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGD-VHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
            TGSG RVNKDP SLL++GLPI+ K AR+LQ  +E +K D+  K W    +  Q+AR V+ K +A+LLK V  + +A+    + E+   ++ L  I+ S EG G V E  KLD+A      +   VG +E +MVP ++A +    +P +++GLPRL GRAT E VLVK P  +  KFDV G LYD+ RL +TLDGY APV+AGT++DL+ +G +Y  L + RSDGFVVQTGDPDPE D V  + P GS + R +PLEIAV  D   +Y  TTEDDGRG+A T LPF+ +
Sbjct:   98 TGSGTRVNKDPESLLRYGLPINSKKARELQAAVEGVKSDILIKRWGAGIAGVQKARTVLGK-EAELLKEVRPSAQAEGKKAIQELKDLLDPLEQILASKEGTGTVQEREKLDKAYAAQDKVARAVGALEELMVPENFARE----VPEEYAGLPRLNGRATVEMVLVKGPEDEDGKFDVEGTLYDECRLVLTLDGYNAPVSAGTVMDLVDKG-FYKGLTVIRSDGFVVQTGDPDPESDKVDGYTPPGSKKVRTVPLEIAVAGDPELLYGATTEDDGRGFAQTVLPFQAY 379          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A0G4EJ74_VITBC (Peptidylprolyl isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ74_VITBC)

HSP 1 Score: 218 bits (556), Expect = 4.330e-64
Identity = 123/284 (43.31%), Postives = 178/284 (62.68%), Query Frame = 1
Query:  106 SGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGA-GVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPD--PEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
            +G+RVNKD  SLL++GLPI  K    LQ  +EA+K D+  K +  A ++  +AR +I   +A LLKA+   +E +   +LA +  S++ L   ++   + G   E AKLD+   +   I   +  + A+MVP +Y    +  +P +F+ LP+L GRA  E V+ K  G KFD+ G LYD+ +L M +DG+ APVTAG  VDL+ +G +Y+++ I+RSDGFVVQTG PD  PEG    + P G+ E R++PLEI V  D  PMY  TTE+DGRG+AAT LPF+ +
Sbjct:  109 AGSRVNKDADSLLRYGLPIQDKDVTALQVELEAVKGDIPVKRFDSAVNHLNKARVLIRDKEASLLKAIRPKSEDKAKELLASIGASVDPLIEAIREPASRGSPQEAAKLDKCLELQGGIADKMTALMALMVPENY----KVPVPQEFASLPQLQGRAKVEMVVKKADGSKFDLEGRLYDEAKLVMVVDGWNAPVTAGNFVDLVSKG-FYDSMKISRSDGFVVQTGKPDSGPEG----YVPTGAKEPRRVPLEIFVKGDNAPMYGETTEEDGRGFAATTLPFQAY 383          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: M1USH1_CYAM1 (Peptidylprolyl isomerase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USH1_CYAM1)

HSP 1 Score: 211 bits (538), Expect = 1.590e-61
Identity = 125/283 (44.17%), Postives = 173/283 (61.13%), Query Frame = 1
Query:  100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQ----KFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLP 936
            +G+   VNKDP SLL+W LPID +  RQLQ  +EA   +L QK WS+ +S+ ++A  + S+N   LL  V    EA+T    AE  +++  L +++ S  A    ++A+  E+  +  D +  VG +E + V           +P ++S LP+LLGRAT EFVL K G +    +FD+ G LYD+ RL M +DGY+APVT G  VDL+ RG +YN L I RSDGFV+QTGDP+PEG +H F  + +++ R IPLEI    D  P+Y  T EDDGRG  AT LP
Sbjct:  110 SGASGVVNKDPESLLRWALPIDNEHLRQLQTELEATLRELRQKKWSQISSHVRKASQMTSRNANDLLADVS---EAKT----AEAQRALSTLQSMLGSLQASADAKDAENFES--MAKDALRQVGTLEELSVKG-----FPFQVPEEYSHLPQLLGRATVEFVLRKSGEEGSPKQFDIDGNLYDRARLVMVVDGYSAPVTGGNFVDLVSRG-FYNGLRIIRSDGFVIQTGDPEPEGKIHGFIDSKTNQERTIPLEIFAKGDPMPLYGTTLEDDGRGGQATVLP 377          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A7R9U5X5_9STRA (Peptidylprolyl isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5X5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 8.440e-60
Identity = 115/285 (40.35%), Postives = 168/285 (58.95%), Query Frame = 1
Query:   94 SNTGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVK-PGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDP-DPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFK 942
            S + +G+RVNKD  SLL++ LP+  K  R+LQ  +E +K  +  + WS   S+ Q+A  V+    A++L AV    +      L  +  ++E L   + ++GAG V    KL     +     + VG +E  M+P +Y       +P +++ LP+L GRA  +FV  K   G+KFD+ GVL D V L M  DGY +P+TAG  VDL+ +G +YNN+ I R+DGFVVQTG+P D     + + P GSSE R+IPLEIA+  DK P YS T ++DGRG   ++LPF+
Sbjct:   55 SASAAGSRVNKDAESLLRYALPVKNKEVRELQAAVEDVKGQIAIRQWSAGTSDVQKAMGVLKSKAAKILAAVPQEKQKAVQGQLDMLGGTLEDLRVALAADGAGEVKGETKLKTCYDLQDKAANTVGAIEENMIPTNY----HVQVPKEYNNLPQLDGRAKVQFVFKKGEPGEKFDLDGVLVDTVTLEMVADGYNSPITAGNFVDLVHKG-FYNNMAINRADGFVVQTGEPKDATEKTNGYVPPGSSEVRRIPLEIALLADKDPFYSTTIDEDGRGGEPSRLPFQ 334          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A6V2I0H8_9STRA (Peptidylprolyl isomerase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I0H8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.700e-57
Identity = 126/291 (43.30%), Postives = 171/291 (58.76%), Query Frame = 1
Query:  100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQ-TTNILAEMDKSIEYLG-NIVQSEGA--GVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFP-------AGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPF 939
            +G+G+RVNKD  SLL++GLPI+ K  R+LQ  +E IK D+  K  S A    ++AR  I   K+   K   S  +A   T IL EM+ +++ L  ++  S+GA  G   E   LD A    + I   +  +E  MVPA+Y +     +PSD+  LP+L GRAT EF LVKP G  FD+ G  + K  + M +DGYT+PVT G  VDL+Q+G +Y N+ I+RSDGFVVQ+G+P  EG    +         AG +  R IP EIA+  DK P+Y  T ED+GRG  AT LPF
Sbjct:  107 SGTGSRVNKDAESLLRYGLPINNKEVRKLQVVIEEIKQDIGSKRKSAALDGVKKARTAI---KSTASKMTASCRDANFCTTILNEMNDNLDPLDQSLKDSQGAQNGSEQERKALDAAYQSQSKIAKQLTALEENMVPANYVTP----VPSDYDDLPQLKGRATVEFELVKPDGAPFDIEGTNFPKANMVMVIDGYTSPVTGGNFVDLVQKG-FYTNMKISRSDGFVVQSGEPS-EGPAIGYVGKPSKSVGAGKNGERLIPCEIAIRGDKGPIYETTIEDEGRGGEATVLPF 388          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: A0A7J7IIK0_9RHOD (Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIK0_9RHOD)

HSP 1 Score: 197 bits (501), Expect = 1.930e-56
Identity = 110/281 (39.15%), Postives = 160/281 (56.94%), Query Frame = 1
Query:  118 VNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGG----QKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPFKVH 948
            VNKDP SLL+W LP++ +  RQLQ  +EA   +L QK W +   + +++  ++ +   +LL  +  +  A++   L  M   IE L + V ++           ++   +  D +  VG +E + V      +    +P ++S LP+LLGR T E +L K G     ++FD+ G LYDK RL + +DGY+APVT G  +DL+ RG +Y+ L I RSDGFVVQ GDP+P+G VH F  A + E R IPLEI    D  P+Y +T EDDGRG  AT LP   +
Sbjct:   78 VNKDPESLLRWALPMNNQSLRQLQAELEAAVRELRQKKWPQIGDHVRKSSLLVQRQADKLLADIPESKRAESQQTLGTMQSMIESLQSFVDAKDG---------EKFESLARDTLRQVGLLEELSV-----KEFPFQVPEEYSHLPQLLGRGTVEIILRKSGENGSPKQFDIDGNLYDKARLVLVIDGYSAPVTGGNFMDLVSRG-FYDGLRIIRSDGFVVQAGDPEPDGKVHGFIDAKTGETRTIPLEIFAKGDTMPLYGMTLEDDGRGGQATVLPLTAY 343          
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Match: K0RVF2_THAOC (Peptidylprolyl isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RVF2_THAOC)

HSP 1 Score: 197 bits (500), Expect = 2.710e-55
Identity = 120/289 (41.52%), Postives = 171/289 (59.17%), Query Frame = 1
Query:  100 TGSGARVNKDPISLLQWGLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLLKAVGSTNEAQT-TNILAEMDKSIEYLG-NIVQSEG--AGVVLENAKLDEASPVHADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKPGGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITRSDGFVVQTGDPDPEGDVHDFFP-----AGSSEARKIPLEIAVTEDKFPMYSVTTEDDGRGYAATKLPF 939
            +GSG RVNKDP SLL++GLPI  K  R LQ+ +E I+ D+  K  S A  + ++A+ +I+  + Q+     S  +AQ  ++ILA M   +  L  ++ +S+   AG   E   LD++  V   I   +  ++  M+P  Y +     +PSD+  LP+L GRAT E ++ KP G  FD+ G L+ + ++ M +DGYTAPVT G  VDL+++G +YN++ I RSDGFVVQTG+P  E + +   P     AG    R IP EI VT DK P Y  T ED+GRG  AT LPF
Sbjct:  166 SGSGTRVNKDPESLLRYGLPIKNKEVRTLQKNIEEIRNDIASKRKSAALDDAKKAKGIINSKEKQM---TASCRDAQVCSDILANMKTEMTPLEVSLKESQDFLAGSEQERKALDDSYKVQDAIQKELTTLQEQMIPPGYVTP----VPSDYDDLPQLEGRATVEMIVKKPDGSNFDIEGSLFKEAKMKMIIDGYTAPVTGGNFVDLVKKG-FYNDMDIQRSDGFVVQTGNPKGEAEGYVGTPSKSVGAGKHGERLIPSEIFVTGDKAPFYETTIEDEGRGGEATVLPF 446          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20265.5743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LET7_ECTSI5.470e-16575.95Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A836CBT3_9STRA9.820e-9754.36Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
W7TQJ8_9STRA1.310e-7847.00Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae T... [more]
A0A6T5MD62_HETAK4.180e-7849.31Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
A0A0G4EJ74_VITBC4.330e-6443.31Peptidylprolyl isomerase n=2 Tax=Vitrella brassica... [more]
M1USH1_CYAM11.590e-6144.17Peptidylprolyl isomerase n=1 Tax=Cyanidioschyzon m... [more]
A0A7R9U5X5_9STRA8.440e-6040.35Peptidylprolyl isomerase n=1 Tax=Pinguiococcus pyr... [more]
A0A6V2I0H8_9STRA2.700e-5743.30Peptidylprolyl isomerase n=2 Tax=Ditylum brightwel... [more]
A0A7J7IIK0_9RHOD1.930e-5639.15Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus ya... [more]
K0RVF2_THAOC2.710e-5541.52Peptidylprolyl isomerase n=1 Tax=Thalassiosira oce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20265contigH-elongata_contig20265:3002..6894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue1e-133
Seed eggNOG ortholog2880.D8LET7
Preferred nameTLP40
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006952,GO:0008150,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0016020,GO:0031976,GO:0031977,GO:0031984,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0098542
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGs2QSSP@2759,COG0652@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPeptidyl-prolyl cis-trans isomerase
Ec32 orthologEc-21_005540.1
Exons9
Model size948
Cds size948
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930139.6890085-CDS-H-elongata_contig20265:3001..31091622930139.6890085-CDS-H-elongata_contig20265:3001..3109Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 3002..3109 +
1691679296.1792219-CDS-H-elongata_contig20265:3001..31091691679296.1792219-CDS-H-elongata_contig20265:3001..3109Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 3002..3109 +
1622930139.7033439-CDS-H-elongata_contig20265:3434..35001622930139.7033439-CDS-H-elongata_contig20265:3434..3500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 3435..3500 +
1691679296.1919036-CDS-H-elongata_contig20265:3434..35001691679296.1919036-CDS-H-elongata_contig20265:3434..3500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 3435..3500 +
1622930139.7203684-CDS-H-elongata_contig20265:3806..38981622930139.7203684-CDS-H-elongata_contig20265:3806..3898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 3807..3898 +
1691679296.204245-CDS-H-elongata_contig20265:3806..38981691679296.204245-CDS-H-elongata_contig20265:3806..3898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 3807..3898 +
1622930139.7359622-CDS-H-elongata_contig20265:4206..43071622930139.7359622-CDS-H-elongata_contig20265:4206..4307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 4207..4307 +
1691679296.2178245-CDS-H-elongata_contig20265:4206..43071691679296.2178245-CDS-H-elongata_contig20265:4206..4307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 4207..4307 +
1622930139.751815-CDS-H-elongata_contig20265:4727..47951622930139.751815-CDS-H-elongata_contig20265:4727..4795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 4728..4795 +
1691679296.226511-CDS-H-elongata_contig20265:4727..47951691679296.226511-CDS-H-elongata_contig20265:4727..4795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 4728..4795 +
1622930139.7726164-CDS-H-elongata_contig20265:5024..51651622930139.7726164-CDS-H-elongata_contig20265:5024..5165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 5025..5165 +
1691679296.2350812-CDS-H-elongata_contig20265:5024..51651691679296.2350812-CDS-H-elongata_contig20265:5024..5165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 5025..5165 +
1622930139.7839546-CDS-H-elongata_contig20265:5472..56171622930139.7839546-CDS-H-elongata_contig20265:5472..5617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 5473..5617 +
1691679296.2444234-CDS-H-elongata_contig20265:5472..56171691679296.2444234-CDS-H-elongata_contig20265:5472..5617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 5473..5617 +
1622930139.7989368-CDS-H-elongata_contig20265:6010..61201622930139.7989368-CDS-H-elongata_contig20265:6010..6120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 6011..6120 +
1691679296.254823-CDS-H-elongata_contig20265:6010..61201691679296.254823-CDS-H-elongata_contig20265:6010..6120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 6011..6120 +
1622930139.811177-CDS-H-elongata_contig20265:6777..68941622930139.811177-CDS-H-elongata_contig20265:6777..6894Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 6778..6894 +
1691679296.2700555-CDS-H-elongata_contig20265:6777..68941691679296.2700555-CDS-H-elongata_contig20265:6777..6894Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20265 6778..6894 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20265.5743.1prot_H-elongata_contig20265.5743.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20265 3002..6894 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20265.5743.1

>prot_H-elongata_contig20265.5743.1 ID=prot_H-elongata_contig20265.5743.1|Name=mRNA_H-elongata_contig20265.5743.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp
FGRQTLASLLAGLAVAANFESAGAASNKLQISNTGSGARVNKDPISLLQW
GLPIDCKPARQLQETMEAIKLDLFQKNWSRAASNCQRARNVISKNKAQLL
KAVGSTNEAQTTNILAEMDKSIEYLGNIVQSEGAGVVLENAKLDEASPVH
ADIVSNVGKVEAMMVPADYASKLEANIPSDFSGLPRLLGRATAEFVLVKP
GGQKFDVGGVLYDKVRLAMTLDGYTAPVTAGTIVDLIQRGGYYNNLPITR
SDGFVVQTGDPDPEGDVHDFFPAGSSEARKIPLEIAVTEDKFPMYSVTTE
DDGRGYAATKLPFKVH
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mRNA from alignment at H-elongata_contig20265:3002..6894+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20265.5743.1 ID=mRNA_H-elongata_contig20265.5743.1|Name=mRNA_H-elongata_contig20265.5743.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3893bp|location=Sequence derived from alignment at H-elongata_contig20265:3002..6894+ (Himanthalia elongata Himel1 dioecious)
TTTGGTCGACAAACGTTGGCTTCGCTCCTGGCGGGGCTCGCGGTCGCCGC CAACTTTGAGTCCGCGGGCGCGGCCTCGAACAAACTACAGATCAGCAACA CGGGCTCGGTGAGGAAGGCATCCCGCGGCCTTCGATCGAAAATGTGTTGC AGTCCTTCCCCCCGAGGGTACGGTACGTTCCGTCGACTGTTTTGCCTACA CCGGCGACTCGCCTAGACTCTAAGAAGGATTCGGATCTTTGTGTTGTTAT GACGCAGTTCCCTCGCTCGCGCATGAGCTTGAAACAGCGAAGCCCAGGAG GTGATAGAGTCGAGAACAAAGAAGCGTCGGAGTTCAACAATAACTGTCAC TTGCCTGTCATGTAGTGTGGCTCGTGTGCTTGGAGCTCGACCTTATCGCT CGCGATCCTTCTTTGGTGCATGCATCTTGCCAGGGGGCCCGGGTCAACAA GGACCCTATATCATTACTCCAGTGGGGTCTTCCGATCGACTGCAAGCCGG TGAGGAAAGAACGCCTTCATTCTTCGGAGTGACCCTAGTTTGTGTCGAGC AAGGTTGCTGGTTTTCTGGCCGCGATCGTCTCTGGCTGGCGAGGTTTGCG TGCCAATAGGGCAATGTTTAGGCACCCGCCCCGTCAGCTAATCGGATCGG AGCGTTTTTGTGGAAGCAGGTCTCGTTTACGGTACAGGTTACACGCAGTC GGTAGCGAAATAGGTCAGCCTCTGCCGCACCCACGACTCAGCAACGCTGC GTATCGCGCCTGTGCTGATCGTCATCGCGTGGCGTCTCGTCTCGTCTCTT AATAGGCGCGACAGCTGCAGGAGACGATGGAGGCGATCAAGCTGGACCTG TTCCAGAAGAACTGGAGCCGAGCGGCTTCCAACTGCCAGCGAGCAAGGTT AGTCAACAGGCCAATTGGGCTAGGTGATCAACCGATACCACAATCGACAT TATCTTCATATCACGCCCGTGCGTGCTCCGGTTATCTCCTGTGATACTGA ACACTTTCTAGCTTAAACTGCAGCGCGCGGTTGTGTGGATCTGCTCCGCG TTGAAAACAAATAATTTGTACCGAGGACGTTCTATCGATTAATGGGGTCG CCTGGCGCCGTTGGGAGGCAACATTGCTGGTATAGTGTAGTGATCATGCC TCCCGCGTCGGGCGCGCGCACCTCCTTGCGCGGGGCACGTCTTGCGCGTA ATCAGAAACGTGATATCAAAGAATAAGGCGCAGCTTCTTAAGGCTGTGGG CTCCACGAACGAAGCTCAGACAACGAATATCCTGGCTGAGATGGACAAGA GCATCGGTGAGAAACGCACTATTTAGAAACTGAACTCAAAACGGCACGGT GCGGTCGCGAAGAGGCTCGCCGCGTCTACTCGTGTGCCGTAGACTCGATC GCTCGTTGCATATGAAATATATCTCAAGGGCGTCTCCGATCTCGTCGGGC TACTGGTCTCATGGTGTTGACTTGAAGAAAAACGGATGTCGTAAGGAATG TGTGTGACGTATGTTTCCCGCAGCCTGTTTGGCGGTCGGGGCATATTTCA CGGTGTTTTAGAAGTACCGCAGGCCCAGACCCTGATTTCTGGGGCGGCGG GATTCTGTGCGCCTTGCGGCTTCGTCAGATGCGTAGCGCGTGATCTTTCC AGCTTTGCGGGGGGTTTTGGCGTGAAAGGGGAAAACCGATGCCCGCTCTC CTGTGCACGATGCCGTCCTCCGGAAGAATACCTCGGAAACATTGTCCAGA GCGAAGGTGCCGGTGTGGTCCTGGAGAACGCCAAGTTGGATGAGGTGAGG CTTTTGATCGTTTCCATAAAGACGCATTACGAAGTGTATCATACGCTTAC TCTACGAGAGAGAAAAAATAATTGTGCGTTGACACTTGGGAAGATCGCCC TTTGCGAGCAGGGAGTCTCGCCGTGGGCAGCCCGGCGTTTCCTCTTTCGA GTCGCCCGCGATACAAAAATAGAAGGCGCGATTAATTCCGGCCGTGATTT TCCTGCGCGTTGCCTCCGCGCAGGCGTCTCCCGTGCACGCGGACATCGTT TCGAACGTAGGCAAGGTGGAAGCCATGATGGTGCCTGCTGACTACGCGAG TAAGCTCGAGGCAAATATCCCATCCGACTTCAGCGGCTTACCGCGGTTAC TTGGGAGAGCGACGGTGAGAAAAAAATGAAATACAAATAACGGAGTGAAG GAACTCGACTCTCGAAAGCTCCGTACAGACGTTCGGCGGCAGTGACAGCG CGCTCAATGTTTTCTTAGTGCGCGACGCGTAACACGCCCTGTATGACGGT GGTCGGCGAATGAGGGAACGATCGGGTGAAATATTTTGTCACTCAAGCTC GAAGCGTGTTTCGCACAGCTGGCGGTGAAGACGCGGAGCATTGCCCTTCT TGCTGTTCGGATGGTTTATTGTTCGCTACCTTTTTTTGTCCACGCTTCCC CCTTCCGTCGGCCTTCTCCAGGCGGAGTTCGTGCTGGTAAAGCCGGGGGG ACAGAAGTTCGACGTGGGTGGCGTGCTGTACGACAAAGTCCGCCTCGCCA TGACTTTGGACGGTTACACCGCGCCGGTGACCGCCGGAACCATCGTGGAC TTGATCCAAAGAGGTGGTTACGCCGAACCGGAGCCTCCATTTGTTTTGAA GTGTGTGTGTTTTGTGTGTGTATGTGCCTGGTCGGATTAAGCGTGGTGGG ATGGAGAAAGCGCTTGTCATACAGCTCTGATTTTTCCCTACAGCTCTCGT ATTCAACCGTGTAGGCATACTGCTTAGGTGTAAGCATCAATTAACGTACG GCTCTCCGCTATCTTCGCGCTCCCGCTGACGTACTACGGGTTACTCGCTT TTGCTTCGTTTGGCACGCCATGGTGGCTGCCGGTCGATGCCGGTAACAGT CAGCATCACTCCAGCCTTATGCTTGGAAGGGAATCGACGCTCTGATGGGT TTGAACCATGTTTGCTTGCTCCATCCGCGCCGTCGATTCGGTTCGGTATA CTTTTCCAGGGTACTACAACAACCTGCCCATCACGCGGAGTGATGGCTTC GTGGTGCAGACGGGGGACCCGGACCCGGAGGGAGACGTGCACGACTTCTT CCCTGCTGGATCTAGCGAGGTGCGGCAGGTCATCTCGTAGTGCCTCGATG TTTCCCTGGTGTTTTGAGTGTATGTTGACGCCGTGATGACAGTCATGCCT TCTGCGGGCTCCAATGGTATCGAGGCGTTTTGAGCTCAAAAGGCGGCACG TCATCCAGGAGTACTATCGTTGAAGCAGCGGACTTGCGGAGGGGTCAGAG AGAGTGGGGGATGTACTTCCAGTATCTTAAACACATATCGTATCCTAACG GACATAGACCACGCATTCCAACGATACCGGAACGGCGCAATGCTAGGCTT TCTCCCGCCAGGCTGCGTTTCAGAACGGAAGATACGAGCTAAAGTATAAT ATGTTTACCACTTTATGCCAGTAATATATTTATGATAGTATATTTACCAT AGTCCAAGTACCGAACGGTGCATTATTGACGTGACCATCCCCTTATTGAC CAAGATGAATATCCACCTATTGTTTAAGTGAAGAGGGACGTTTTTCGGTG AACCTCTGGACCTCTTCTAAATAAGTATAGGAAATTATCACAAAAAGTAA GAGGCGTGACGTTCGGGCGACCAGAGTGTGCGGTGCGGCGTGTTTTCGTC TGCGTTGCCCGCGTAACCCGTGCCACCCCCCTCCACCTGATCACGATATG TTTGTCACCTATCCCCAACATAATAGGCCCGGAAAATTCCGCTTGAAATC GCCGTGACCGAGGACAAGTTCCCGATGTACTCGGTAACCACGGAAGATGA CGGGAGGGGGTACGCGGCTACCAAGCTCCCCTTTAAGGTGCAC
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Coding sequence (CDS) from alignment at H-elongata_contig20265:3002..6894+

>mRNA_H-elongata_contig20265.5743.1 ID=mRNA_H-elongata_contig20265.5743.1|Name=mRNA_H-elongata_contig20265.5743.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at H-elongata_contig20265:3002..6894+ (Himanthalia elongata Himel1 dioecious)
TTTGGTCGACAAACGTTGGCTTCGCTCCTGGCGGGGCTCGCGGTCGCCGC
CAACTTTGAGTCCGCGGGCGCGGCCTCGAACAAACTACAGATCAGCAACA
CGGGCTCGTTTGGTCGACAAACGTTGGCTTCGCTCCTGGCGGGGCTCGCG
GTCGCCGCCAACTTTGAGTCCGCGGGCGCGGCCTCGAACAAACTACAGAT
CAGCAACACGGGCTCGGGGGCCCGGGTCAACAAGGACCCTATATCATTAC
TCCAGTGGGGTCTTCCGATCGACTGCAAGCCGGGGGCCCGGGTCAACAAG
GACCCTATATCATTACTCCAGTGGGGTCTTCCGATCGACTGCAAGCCGGC
GCGACAGCTGCAGGAGACGATGGAGGCGATCAAGCTGGACCTGTTCCAGA
AGAACTGGAGCCGAGCGGCTTCCAACTGCCAGCGAGCAAGGCGCGACAGC
TGCAGGAGACGATGGAGGCGATCAAGCTGGACCTGTTCCAGAAGAACTGG
AGCCGAGCGGCTTCCAACTGCCAGCGAGCAAGAAACGTGATATCAAAGAA
TAAGGCGCAGCTTCTTAAGGCTGTGGGCTCCACGAACGAAGCTCAGACAA
CGAATATCCTGGCTGAGATGGACAAGAGCATCGAAACGTGATATCAAAGA
ATAAGGCGCAGCTTCTTAAGGCTGTGGGCTCCACGAACGAAGCTCAGACA
ACGAATATCCTGGCTGAGATGGACAAGAGCATCGAATACCTCGGAAACAT
TGTCCAGAGCGAAGGTGCCGGTGTGGTCCTGGAGAACGCCAAGTTGGATG
AGAATACCTCGGAAACATTGTCCAGAGCGAAGGTGCCGGTGTGGTCCTGG
AGAACGCCAAGTTGGATGAGGCGTCTCCCGTGCACGCGGACATCGTTTCG
AACGTAGGCAAGGTGGAAGCCATGATGGTGCCTGCTGACTACGCGAGTAA
GCTCGAGGCAAATATCCCATCCGACTTCAGCGGCTTACCGCGGTTACTTG
GGAGAGCGACGGCGTCTCCCGTGCACGCGGACATCGTTTCGAACGTAGGC
AAGGTGGAAGCCATGATGGTGCCTGCTGACTACGCGAGTAAGCTCGAGGC
AAATATCCCATCCGACTTCAGCGGCTTACCGCGGTTACTTGGGAGAGCGA
CGGCGGAGTTCGTGCTGGTAAAGCCGGGGGGACAGAAGTTCGACGTGGGT
GGCGTGCTGTACGACAAAGTCCGCCTCGCCATGACTTTGGACGGTTACAC
CGCGCCGGTGACCGCCGGAACCATCGTGGACTTGATCCAAAGAGGTGGCG
GAGTTCGTGCTGGTAAAGCCGGGGGGACAGAAGTTCGACGTGGGTGGCGT
GCTGTACGACAAAGTCCGCCTCGCCATGACTTTGGACGGTTACACCGCGC
CGGTGACCGCCGGAACCATCGTGGACTTGATCCAAAGAGGTGGGTACTAC
AACAACCTGCCCATCACGCGGAGTGATGGCTTCGTGGTGCAGACGGGGGA
CCCGGACCCGGAGGGAGACGTGCACGACTTCTTCCCTGCTGGATCTAGCG
AGGGTACTACAACAACCTGCCCATCACGCGGAGTGATGGCTTCGTGGTGC
AGACGGGGGACCCGGACCCGGAGGGAGACGTGCACGACTTCTTCCCTGCT
GGATCTAGCGAGGCCCGGAAAATTCCGCTTGAAATCGCCGTGACCGAGGA
CAAGTTCCCGATGTACTCGGTAACCACGGAAGATGACGGGAGGGGGTACG
CGGCTACCAAGCTCCCCTTTAAGGTGCACGCCCGGAAAATTCCGCTTGAA
ATCGCCGTGACCGAGGACAAGTTCCCGATGTACTCGGTAACCACGGAAGA
TGACGGGAGGGGGTACGCGGCTACCAAGCTCCCCTTTAAGGTGCAC
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