mRNA_H-elongata_contig20249.5736.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: D8LLC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC8_ECTSI) HSP 1 Score: 555 bits (1430), Expect = 1.190e-189 Identity = 346/593 (58.35%), Postives = 403/593 (67.96%), Query Frame = 1
Query: 4 GRKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRPRDDRGQDKRDGDDQDVSGEGTRFAGKRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAG-SAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAAGA-DDGEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSD----LD--AESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEE-RAVLDSQFEATLAAYDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVN----------------------GDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLPERVPNERGMISLTAGKNFGEKRDAEETVEEKRQRKAKIK 1689
GRKKKFIDKK+++TFHVVHRSQQDK EGEE+AS+FVLIPS PRD R QD+R + G+G +R+HINALG PNDGYDY+QH+KSM GGGTFV+K+GKV HFA G S G+R GGA IP EALPS E LDRQLEAVTISEKVMD DMR+ALA L V E+ + DE+N+LDDDFV+QAAGA +DG GFDFDAHVARLM+ASA+ETGLR+R+ +DDL+ KGL RLR+ S D LD A SD SGE D+ LLEGL++ GG GV GEGTEE RAVLDSQFEATLAAYDSDEWGELEEDD+RV+G+WD EQ YAN C+D+FLA E+A W +G +RLP +QR+I TL GDA G P V + SGPRLGKLRG G + ++D+E L D+ HNEYLRE+ E WDCETIVSTYSNLDNHPSVLGTGRKAKP + R +E GG DAS V +V LS KTG+PLGVLPER N+ GM+SL AGKN GEKRD EET EEKR+RKA+IK
Sbjct: 2 GRKKKFIDKKESTTFHVVHRSQQDKANEGEEEASEFVLIPSGPPRDSRPQDERKAAGKG-KGKGGVAGAERDHINALGLPNDGYDYDQHLKSM-GGGTFVSKTGKVQHFAEGNSQGARGGGAKPAIPEEALPSGETLDRQLEAVTISEKVMDGDMRRALAAGLADVGEEDWDDESNMLDDDFVVQAAGAGEDG--GFDFDAHVARLMEASAKETGLRQRSRDDDLQTKGLVRLRRDSDSESDDSEDDVATLDGGAGSDDSGEIDDALLEGLDISGAAAAGG--GVPGEGTEEDRAVLDSQFEATLAAYDSDEWGELEEDDDRVQGRWDLEQHDYANTCMDDFLAANEDARWTEGVQRLPPDQRSIAAATLAIEGXXXXXXXXXXXXXXXXXXSVGDAGRAGXXXXXXXXXXXXGVGP--SVEAAAKTATSGPRLGKLRGFGAVPVXXXXXXXXXGEEDDE-----LHDMEHHNEYLREKPAEQWDCETIVSTYSNLDNHPSVLGTGRKAKPGRARRSPVAEGVGG----GDAST--VQQVALSAKTGLPLGVLPERTYNDTGMVSLIAGKNKGEKRDTEETAEEKRRRKAQIK 575
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A836CIF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF2_9STRA) HSP 1 Score: 170 bits (431), Expect = 7.390e-42 Identity = 216/715 (30.21%), Postives = 283/715 (39.58%), Query Frame = 1
Query: 10 KKKFIDKKQASTFHVVHRSQQDKTK-EGEE-DASKFVLIPSVRPRDDRGQDKRDGD---DQDVSGEGTRFAGKRNHINALG----------------------FPNDG--YDYEQHIKSMVGGGTFVTKSGKVDHFAAGSA---GSRAGGAALTIPVEALPSEE-VLDRQLEAVTISEKVMDSDMRKALAGELYG-------------------------------VEEDSFVDENNLL--DDDFVIQAAG-ADDGEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAAYDSDEWGE---------------LEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDAVGNPSEGRGDETGTE-------------------AGKSPGEVVGVVGGLSASGPRLGKLRGLGREG------------------------------------LEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLPE----RVPNERGMISLTAGK---------NFGEKRDAEETVEEKRQRKAKIKEEKRV 1704
KKKFI+ + +T+ +VHRSQ DK EG+E DAS+FVL+P+ + R +R+G G G R+ R HINA P+DG YDYE H+K+M GGGTF+ K G+V GS G G +P E+LP+EE + R L A+TIS+KVMD DM VEE ++ +DDFV+QAAG D + GFDFDAH+ARL+ AS RE GLR R A+DD ++GSD GE D+ E G G D A+L +QFEATLA YDSD WGE + A+ +DEFL + + NW G R R V + G+ +G A ++P SGPRLG LRGL G L++EE + ID+ D Y ++ E WDCET++STYSNLDNHP+VL VA + +VLS KTG+P+GVL + R + G S + N GE R ET EEK+ RKA+IKEE+R+
Sbjct: 3 KKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTM-GGGTFINKEGRV-----GSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDD-----------------FSGSD--------GELDDPSEFSTPSESGSYSG-DAPTADAAA--AALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGR-----RTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAP---------CGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVP------IDETFD-------YFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXX------VAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRL 650
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A7S0XBI8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBI8_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.280e-38 Identity = 174/553 (31.46%), Postives = 247/553 (44.67%), Query Frame = 1
Query: 10 KKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRPRDDRGQDKRDGDD--QDVSGEGTRFAGKRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAAGADDGEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAAYDSDEWGELEEDDERVKGQWD-PEQQQYANRCLDEFLANKEEANWVDGFKRL-PLEQRAITVETLVNGDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTG-RKAKPRKPR----GPLASENAGGVSSVADASI-------------SIVTKVVLSEKTGIPLGVLPERVPNERGMI 1602
KK FI K + T+HVVHRSQ D EE S +VLIP+ +D + +D + S + +F K +HIN LGF NDGYDY +HIK +V GG F+ +G++ R + IP + LPS E DR LEA+ IS+K MD D+R AL + G E+ F + LDDDFVIQ A+ FDFDAH+ARL+ S ++ G A +D D D E E+L E V + Q +A++D QFE L Y+ E V+G D E +Y + L+EF+ N++ DG R PLE+ + V+ D + + + + TEA K E ++ ++ G+ + + D + VE +L + NE WDCETI++TYS LDNHPSV+ K KP K R LA+EN + + +I TK++LS KT +P+G P N+ I
Sbjct: 3 KKPFIKKSEGQTYHVVHRSQTDSAYANEEKPSDYVLIPAQLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHINHLGFKNDGYDYSKHIK-VVDGGKFIGLNGELLE--------RPVVKEIEIPEDLLPSAEEFDRNLEAIVISDKYMDDDIRNAL--DFDGDEDGEFEE----LDDDFVIQVM-AEPEVPDFDFDAHIARLIANSEKDLGYVPARAH-------------------VTDTDDDDFLDEDEESIESLHENKKVSDIQ---------------QAIIDEQFEKMLEEYEXXXXXXXXE----VEGMIDINENAEYLDEALNEFIENQKLEKEYDGLVRQHPLERLNRQIINKVHEDQNIDIKQLQKNSI-TEAEKQQNEASMIISEVN---------EGISNQAVADP-WETVE----------YLKTVKTKNE---------WDCETILTTYSTLDNHPSVIKDEFSKFKPHKSRYVVANELANENRQKTLDKTEKLLCNEKKYNIIPNHNTITTKILLSNKTMLPIGFGPHEKNNKSTSI 471
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A6A4EL32_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EL32_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.380e-38 Identity = 181/595 (30.42%), Postives = 252/595 (42.35%), Query Frame = 1
Query: 7 RKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRP-------------RDDRGQDKRDGDDQ-----------------DVSGEGT------RFAG--KRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAA--GADD-GEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAA-YDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLPERVPNERGMISLTAGKNFGEKRDAEETVEEK 1665
RKK+FIDKK A FHVVHRSQ+D K + +ASK+VL+ S + DD G + D DD+ SG RF G + ++ G P DGYDY QH+K M G G F + + + D A SR + +P +ALPS E DR L+A+T++ VMD D+R+AL V +++F + LDD+FV+QAA ADD G FD+DAH+A+LM+A++ T L Y G+ D+E DE + + EE+ VLD FE TLA YD D+ GELEEDD +G+ E L + A V+ + + E A L N GN + +E E +E L ++ N+YL+ + E WDCETIVSTYS LDNHP+VL + +K + P+ ++S+A+ KV LS KTG+PLGV + T + +R ET E+K
Sbjct: 3 RKKQFIDKKSAQHFHVVHRSQRD-PKANDPEASKYVLLSSSQHVELRSDSESDDEYEDDGGDSELDSDDEMPDLVDTKSTKPKKKSSSSSGRAAFPVRKVRFGGVEAEDLVDENGLPRDGYDYSQHMKEM-GQGKFYSATSRFDAGEEARALSRK----VDLPEDALPSAEEQDRLLDAITLTTDVMDEDLREAL------VNDEAFEE----LDDNFVVQAAEQNADDAGTDDFDYDAHIAKLMEAASGVTPL-------------------------YRGNLTDSE-------DEEFSDDXXXXXXXXXXXXXXXTPDRDEEQRVLDELFEKTLAEEYDDDQLGELEEDDPETRGK--------------ETLDGELLAAVVEDYAFVQQEL-ADAEGKLGNALRAGNRLKQVLEECEAERHAYXXXXXXXXXXXXXXXXXXXXXXXXKKE----------------------LQELFERNQYLQREEREQWDCETIVSTYSTLDNHPTVLREEGPTRRKKKKQPV-------IASIAEGVDIRKQKVTLSRKTGMPLGVFETEAAVKSKPAKHTEQQPETSRRQKGETKEQK 505
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: H3GXQ9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXQ9_PHYRM) HSP 1 Score: 156 bits (395), Expect = 1.290e-37 Identity = 171/565 (30.27%), Postives = 248/565 (43.89%), Query Frame = 1
Query: 7 RKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRPRDDRGQDKRDGDDQDVSGEG------------------------TRFAG--KRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAA---GADDGEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAA-YDSDEWGELEEDDERVKGQWDPEQQQYANRCLD-EFLANKEEANWVDGFKRLPLEQRAITVETLVNGDA-VGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEG-------IDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLPERVP 1584
RKK+FI+KK A FHVVHRSQ+D K + +ASK+VL+ S + + R + D D RF G + ++ G P DGYDY QH+K M G G F + + + D A SR + +P +ALPS E DR L+A+T++ VMD D+R+AL V +++F + LDD+FV+QAA D G FD+DAH+A+LM+A++ T L Y G+ D+E + + E D+ + + E + LD FE TLA YD ++ GELEEDD +G+ LD E LA +E A + L + + +GNP + + V+ +A R E +E + E++ G L+++ N+YL+ E WDCETIVSTYS LDNHP+VL + +K + PL ++S+A+ KV LS KTG+PLGV P
Sbjct: 21 RKKQFINKKTAQHFHVVHRSQRD-PKANDPEASKYVLLSSSQHVELRSDSESDDDXXXXXXXXXXXXXLVDAPSAPKKSKAAFPVRKVRFGGVEAEDLVDENGLPRDGYDYTQHMKEM-GQGKFYSATSRFDAGEEARALSRK----VDLPEDALPSVEEQDRLLDAITLTTDVMDVDLREAL------VNDEAFEE----LDDNFVVQAAEDNAEDAGTDDFDYDAHIAKLMEAASGVTPL-------------------------YRGNITDSEDEEFSDEXXXXXXXXXXHE------DLELPEDRDEAQRALDELFEKTLAEEYDDEQLGELEEDDPETRGK----------ETLDGELLA-------------AVVEDYAFVQQELADAEGKLGNPL------------REGNNLKQVLDECAAE-----------RFAYEYDEDAETEDEXXXXGPVERAERXXXXLEELFERNQYLQREDREQWDCETIVSTYSTLDNHPTVLREEGPTRRKKKKQPL-------IASIAEGEDIRKQKVTLSRKTGMPLGVFESAAP 485
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A3F2RYW0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYW0_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.460e-37 Identity = 186/611 (30.44%), Postives = 279/611 (45.66%), Query Frame = 1
Query: 1 QGRKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPS------VRPRDDRGQDKRDGDDQ----------------DVSGEG--------TRFAG--KRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAAGADDGEVG---FDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAA-YDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDA-VGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGI-------DDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLPERVPNERGMISLTAGKNFGEK-RDAEETVEEKRQRKAKIKEEK 1698
QGRKK+FI+KK A +HVVHRSQ+D + + +ASK+VL+ S +R + + D DD+ +G+G RF + ++ G P DGYDY QH+K M G G F + + + D S SRA + +P +ALPS E +R L+A+T++ VMD D+R+AL V +F + LDD+FV+QAA ++ E FD+DAH+A+LM+A+ G+ + R G+ D+E + EF + +G+ V E E + VLD FE TLA YD ++ GELEEDD +G+ LD L +E AI + L + + +GNP ++ + V+ A R E++E EED+ EE + + ++ N+YL+ + E WDCETIVSTYS LDNHP+VL R+ P++ + + A V++ + KV LS KTG+PLGV TA GE+ + +E V++ R++K + KEEK
Sbjct: 341 QGRKKQFINKKTAQHYHVVHRSQRD-PRANDPEASKYVLLSSTQQDVELRSDSEYEDSELDSDDEMPDLVDTPAPKAKTSLKPTGKGKIAFPTRKVRFGSVEAEDLVDENGLPRDGYDYAQHMKEM-GHGKFYSATSRFD----ASEESRAMSRHVELPEDALPSGEEQERLLDAITLTTDVMDEDLREAL------VNGGAFEE----LDDNFVLQAAEENEAEGATDDFDYDAHIAKLMEAA-----------------NGVPKFR---------GNLTDSEDEE--EFSDXXXXXXEFSDGE-----VETPQERDEAQRVLDELFEKTLAEEYDDEQLGELEEDDPETRGE----------ETLDGALLEA------------VIEDYAIVQQELADAEGKLGNPL------------RTGNRLQQVLEECEAE-----------RRAYEEDEDATTEEDEVEEDPVARAKREEKEIQELYERNKYLQREEREQWDCETIVSTYSTLDNHPTVL---REEAPKRKK----KKQAVAVTAAVTEGVR-TQKVTLSRKTGMPLGVFE------------TAASTKGEEPKTYKEGVQDNRRQKGETKEEK 837
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A5D6YF69_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF69_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.010e-36 Identity = 175/561 (31.19%), Postives = 248/561 (44.21%), Query Frame = 1
Query: 4 GRKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPS-----VRPRDDRGQDKRDGDDQDVSGE--------GTRFAGKRNH--------------------INALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAAGAD-----DGEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAA-YDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKP-RKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGV 1566
G+KK+FI+KK A FHVVHRSQ+D + DASK+VL+ S + R D D D + +S T+ A K N ++ G DGYDY QH+K M G G F + G+ F+ S +R + +P + LPS E DR L+A+T++ VMD D+R+AL V ++F + +DDDF+ QAA AD D + GFD+DAH+A+LM+A++ R +D D ++ EE+ VLD FE TLA YD ++ GELE+DD +G+ E + LDE + + ++ +E L + VGNP +G E++ + L EG E+ E D + EDDD + ++ L + N YL R E WDCE+IVSTYSNLDNHP+VL R+ P RK + A A ++ A + VVLS KTG+PLGV
Sbjct: 2 GKKKQFINKKTAQHFHVVHRSQRDPLA-NDPDASKYVLLSSKNQVEIEFRSDNEDDSDDEMPELISSPRTAAAPTAATKRAAKANAGASAFPVRRVRFGDYEAEDLVDENGMVRDGYDYTQHMKEM-GKGKFYSADGQ---FSPQSELARR----VELPADVLPSAEEQDRLLDAITLTTDVMDDDLREAL------VNAEAFEE----MDDDFMAQAAQADPENRADAD-GFDYDAHIAKLMEAASGVPKFRGNLTDDXXXXXXXXXXXXXXXXXXXXXVDPATKA---------------------------------EEQRVLDELFEKTLAEEYDDEQLGELEDDDPATRGELVLE-----GKLLDEIVED----------------YVSVQLEMLADEGKVGNP---------LRSGNRLKEILEECEREREAAEAL--------EGEEEGEEDTMPEDDDVD-LEQALSALYTRNAYLTARVEEEWDCESIVSTYSNLDNHPTVL---REENPQRKKKKARAGAAAMDTEALEAAVAGKRSTVVLSRKTGMPLGV 467
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A024TFD3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFD3_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.120e-35 Identity = 169/542 (31.18%), Postives = 240/542 (44.28%), Query Frame = 1
Query: 13 KKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRPRDDRGQ-DKRDGDDQDV----------SGEGTRFAG--KRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEVLDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAA--------GADDGEVGFDFDAHVARLMDASARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAA-YDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLP 1572
K FI+KK+A FHVVHRSQ+D E ASKFVL+ S R + D D DD D+ SG+ RF R+ +N LG NDGYDY +H+K M G G F + G D AG R + +P E + S DR L+A+T++E VMD D+R+AL V +++F + L DDF++QAA GAD GFD+DAH+A+LM A+ R ++D+ G Y +D + E D G + ++ Q LD FE +A YD ++ GELEED+ R K + + ++ +D+++ ++E +G PL E L E E S V+ + A VE+ D L D+ N YL +R + WDCETIVSTYSNLDNHP+V+ KA +K + +A++S +VLS KTG+PL ++P
Sbjct: 6 KSFINKKEAQHFHVVHRSQRDPLINDPE-ASKFVLLSSKPLPSGRNELDAYDSDDSDLPDLVPQVAAPSGKTVRFGNVVARDLVNELGMVNDGYDYSKHMKEM-GQGHFYSAGGTYDE-GAGLLNKR-----VVLPDEVMASANEHDRMLDAITLTEDVMDEDLREAL------VNDEAFEE----LTDDFMLQAAQELPDDADGADVAADGFDYDAHIAKLMAAAEGIPKYRGHISDDEDXXXXXXXE-----GCEY--TDEEHEDD-----------GQDKDDAQ----------------RALDDAFEKLMAEEYDDEQVGELEEDETRGKLVLEGD---LLDQIVDDYVNIRQELMADEGRLGNPLRSGNRLKEILA--------------ECAVELADSDDVVMKPTDPVPA-----------------------VEQPAD-------LSDLSS-NPYLVQRIDDQWDCETIVSTYSNLDNHPTVIREPSKAPKKKTK----------AQKIAESST-----IVLSSKTGMPLNIVP 432
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A067C671_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C671_SAPPC) HSP 1 Score: 144 bits (364), Expect = 9.550e-34 Identity = 173/584 (29.62%), Postives = 251/584 (42.98%), Query Frame = 1
Query: 4 GRKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRPRDDRGQ----DKRDGDDQDVSG-------EGTRFAG--KRNHINALGFPNDGYDYEQHIKSMVGGGTFVTKSGKVDHFAAGSAGSRAGGAALTIPVEALPSEEV-LDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQAA---GADDGEV-GFDFDAHVARLMDAS----ARETGLRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGEGTEERAVLDSQFEATLAA-YDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNEYLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLP---ERVPNERGMISLTAGKNFGEKRDAEETVEEKRQRK 1677
G+KK FI+KK+A FHVVHRSQ+D + ASKFVL+ + + ++ G D D DD D+ + RF ++ +N LG NDGYDY +H++ +G G F + G D AG R + +P + L S V +R LEA+T++E VMD D+R+AL E D+F + L+DDF++QAA G DDG GFD++AH+A+LM A+ L + +D+L +Y S DA+ LD FE + YD +E GEL+E++ R L+ L ++V L++ + E +GNP +G RL ++ L ED + EE + E +DDI N YL R + WDCETIVSTYSNLDNHP++L R+ P+K + +NA ++LS KTG+PL + P E +S R+ +ET EEK++RK
Sbjct: 2 GKKKAFINKKEAQHFHVVHRSQRDPLI-NDPTASKFVLLSATQAQEFDGSQAPYDSGDDDDDDMPDLVASAPTKQVRFGNVVAQDLVNELGMVNDGYDYTKHMRE-IGHGQFYSAGGTYDE-GAGLLSKR-----VVLPDDVLASNTVESERMLEAITLTEDVMDEDLREALTNE------DAFEE----LNDDFMLQAAEDNGEDDGAADGFDYEAHIAKLMAAADGIPKYRGNLSDDEDDDELXXXXXXXXXXXXXXXAYGESKDDAQR-------------------------------------ALDEAFEKLMEEEYDDEEIGELDEEETR------------GELLLEGALLESIVQDYVH------LQEEVMQTE-----GRIGNPLR--------------------------TGNRLQEV--LAECAAEDALYESEEEAEPELAN---MDDIAHTNPYLAPRVEDQWDCETIVSTYSNLDNHPTLLREPRRENPKKKK-----KNA--------------NHIILSSKTGMPLNITPISEEAESQHDDAVSYVGSVVPQLVRNRQETKEEKKERK 457
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Match: A0A7S2R514_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R514_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.150e-33 Identity = 177/619 (28.59%), Postives = 281/619 (45.40%), Query Frame = 1
Query: 7 RKKKFIDKKQASTFHVVHRSQQD-------KTKEGEEDASKFVLIPSVRP----RDDRGQDKRDGDDQDVSGEGTRFAGK-RNHINALGFPNDGYDYEQHIKSMVGGGTFVT-KSGKVDHFAA-GSAGSRAGGAALTIPVEALPSEEV--LDRQLEAVTISEKVMDSDMRKALAGELYGVEEDSFVDENNLLDDDFVIQA----------AGADDGEVGFDFDAHVARLMDASARETG----LRERTAEDDLEMKGLARLRKGGGGSSYAGSDLDAESDRSGEFDETLLEGLNVEEGQGGGGDVGVLGE--GTEERAVLDSQFEATLAAYDSDEWGELEEDDERVKGQWDPEQQQYANRCLDEFLANKEEANWVDGFKRLPLEQRAITVETLVNGDAVGNPSEGRGDETGTEAGKSPGEVVGVVGGLSASGPRLGKLRGLGREGLEDEEGDQVEEDDDEEGIDDFLDDIGRHNE--------------------YLRERQPELWDCETIVSTYSNLDNHPSVLGTGRKAKPRKPRGPLASENAGGVSSVADASISIVTKVVLSEKTGIPLGVLPERVPNERGMISLTAGKNFGEKRDAEETVEEKRQRKAKIKEEKRVS 1707
+KK FIDKK AST+H+V RSQ+D T E + S F+L+P+ T K ++ ++ G ++ Y+Y++H+K + G G + + SGK+D AA G A A T+P+ ++E+ LDR L+++ +S+ MDSDM +AL G+ +E SF + + DDF I A +G D GFDFDAH+ L++ ++++ G R + DD G L K G G + DL E + E D E NVE+ GV+ + EERA+++ +FE LA YDSDE G+L+ + + + G E + D+FL K + +++G LP +R VG G + G R+ +GL +DEE D++E ++ F D + ++ Y +R WDCE+I+STYSN DN+P+V+G RK K KP+ GV + + + ++ LS KTG+P+ +P ++ + S+ N G+ R E+ EEK+ RK +K+EK ++
Sbjct: 3 KKKPFIDKKNASTYHIVRRSQRDVGGYYDDSTGELNDLPSDFLLMPTPETVKXXXXXXXXXXXXXXXXXXXXXPTVLLNKMKSKLDQAGLLDEDYNYDRHMKPITGSGVYFSGDSGKLDTRAALGDA------RASTVPL----NDEIRELDRNLDSIALSQDCMDSDMAQALFGDF---DEGSFEE----ILDDFCITADEEPQHDDNESGDGDDNNGFDFDAHIQDLLNKASKQEGGGSMKTNRQSNDDF-FSGQKALHKHGHGKLH---DLVEEDE---EEDSLNREFNNVED------TAGVVPKLCPDEERALVE-KFEMALAEYDSDELGDLDNECQEIGGVRPLEGDKQLEAVFDDFLTEKRDEIFIEGTSHLPENKR-----------------------------------VGGSGFAALVGKRMIPSKGLKNTEDQDEE-DKIE-------VEKFQDVLAEADQILANPEMDLPPEEVFIDGKSYFTQRTVNPWDCESILSTYSNCDNNPAVIGRNRKKKSSKPKET-------GVEGIPEDQPA---QIRLSNKTGLPINTMPTAYTDDDTLASV----NRGQARRRGESKEEKKARKQGVKQEKLIA 533 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20249.5736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20249.5736.1 >prot_H-elongata_contig20249.5736.1 ID=prot_H-elongata_contig20249.5736.1|Name=mRNA_H-elongata_contig20249.5736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=573bp QGRKKKFIDKKQASTFHVVHRSQQDKTKEGEEDASKFVLIPSVRPRDDRGback to top mRNA from alignment at H-elongata_contig20249:1282..6329+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20249.5736.1 ID=mRNA_H-elongata_contig20249.5736.1|Name=mRNA_H-elongata_contig20249.5736.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5048bp|location=Sequence derived from alignment at H-elongata_contig20249:1282..6329+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20249:1282..6329+ >mRNA_H-elongata_contig20249.5736.1 ID=mRNA_H-elongata_contig20249.5736.1|Name=mRNA_H-elongata_contig20249.5736.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3438bp|location=Sequence derived from alignment at H-elongata_contig20249:1282..6329+ (Himanthalia elongata Himel1 dioecious)back to top |