mRNA_H-elongata_contig20239.5729.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20239.5729.1
Unique NamemRNA_H-elongata_contig20239.5729.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: D8LGF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF2_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 4.800e-92
Identity = 140/168 (83.33%), Postives = 158/168 (94.05%), Query Frame = 1
Query:   19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
            +GIA LES+RQFITTPTAATFSS FV+ESNVC+VSILRAGDALAEAA++CIP APVGKILIQRDEES DKHPVLFYKKLP+KI  MQVLLCDPMLATGGSALMAIR L+E+GVKE+ +VF+TVVVCPEG+ A+R EFP+VTIVTGA+DDCLDE++YILPGLGDFGDRL
Sbjct:  148 EGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIGKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 315          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A6H5L6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 5.480e-90
Identity = 139/168 (82.74%), Postives = 157/168 (93.45%), Query Frame = 1
Query:   19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
            +GIA LES+RQFITTPTAATFSS FV+ESNVC+VSILRAGDALAEAA++CIP APVGKILIQRDEES DKHPVLFYKKLP+KI  MQVLLCDPMLATGGSALMAIR L+E+GVKE+ +VF+TVVVCPEG+ A+R EFP+VTIVTGA+DDCLDE++YILPGLGDFGDR 
Sbjct:  310 EGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRF 477          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S2UE47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UE47_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.270e-53
Identity = 87/168 (51.79%), Postives = 120/168 (71.43%), Query Frame = 1
Query:   25 IASLESTRQFITTPTAATFS-SVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLM-ESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
            IA L+++   I TP    F  +  VD++ +C VSI+RAGD+L EA + C+P  PVGKILIQRDEES  K   LFY K+P  + DM ++LCDPMLATGGSA+ AI TL+ E GV  S ++F  ++ CPEGL ++   +P++ IVT  +D+CL+++KYI+PGLGD+GDR 
Sbjct:   30 IAELQTSPITIQTPCVDQFEGTAVVDKNQICAVSIVRAGDSLLEAVRECLPGVPVGKILIQRDEESPGKEAKLFYAKMPPGVKDMTIILCDPMLATGGSAMKAIETLVSEFGVSPSNILFANMICCPEGLLSMATAYPQIKIVTACIDECLNDQKYIVPGLGDYGDRF 197          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S2LGL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL4_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.580e-52
Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 1
Query:   55 ITTPTAATFSSV-FVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
            ITTP +        +   N+CVVSI+RAGD+L EA ++C+P   +GKILIQR+EE+ +K P L+Y KLP +I DM VLLCDPMLATGGSA  A+  L + GV  S ++F+ V+ CPEGL  L E+ P V +VT  VD+CL+E KYI+PGLGD+GDR 
Sbjct:   60 ITTPCSPNIEGKELMSVDNICVVSIVRAGDSLMEAVRACLPGVSIGKILIQRNEETTEKLPTLYYSKLPPRIKDMNVLLCDPMLATGGSAKAALDVLTKHGVLLSNIIFVNVICCPEGLQRLAEDVPDVKVVTACVDECLNENKYIVPGLGDYGDRF 216          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A8K1CII0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CII0_PYTOL)

HSP 1 Score: 174 bits (442), Expect = 5.540e-52
Identity = 88/168 (52.38%), Postives = 121/168 (72.02%), Query Frame = 1
Query:   19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQ-VLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
            +G+A+  +  + + TPT   F+ + V ++++C VSI+RAGD+L +A   C P   VGKILIQRDE S DKHP+LFY KLP +I     VL+ DPMLAT GS L+AI+TL+++GV E ++VFL V+ CPEG+  L + +P V +VT AVD  L+E KYI+PGLGD+GDR
Sbjct:   56 EGLATCATVSETVKTPTGDAFTGL-VPQAHICAVSIIRAGDSLLDAVMKCDPTVSVGKILIQRDESSHDKHPMLFYSKLPPQIASYDHVLVVDPMLATAGSVLLAIKTLIDAGVAEEKIVFLNVISCPEGIHTLFKAYPNVKVVTAAVDRGLNEHKYIVPGLGDYGDR 222          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A836CLB7_9STRA (Uracil phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.530e-51
Identity = 87/169 (51.48%), Postives = 115/169 (68.05%), Query Frame = 1
Query:   19 QGIASLESTRQFITTPTAATF-SSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
            + +A L + +  ITTPT AT   +V ++ S VC VSI+RAGD+L EA +   P   VGKILIQRDE S DKHPV++Y K P  I  M V+LCDPMLATGGS +MA+ TL+++G +   ++F  V+  PEG+ A+    P V IVT  +D  L++ KYI+PGLGDFGDR 
Sbjct:   46 EAMAMLPAQQVSITTPTGATLPDAVRINTSKVCAVSIIRAGDSLLEAVRKIAPDVHVGKILIQRDESSADKHPVMYYHKFPLGIARMPVILCDPMLATGGSVIMAVNTLLDAGCRAESIIFANVIAAPEGIEAVSSAHPAVRIVTCVIDASLNDNKYIMPGLGDFGDRF 214          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: F0XXG3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG3_AURAN)

HSP 1 Score: 169 bits (429), Expect = 4.970e-50
Identity = 89/151 (58.94%), Postives = 108/151 (71.52%), Query Frame = 1
Query:   67 TAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
            T  T S+V V E ++C+V I+R+G  L EA +  +P A   KILIQRDEE+    PVL Y KLP KI  M VLLCDPMLATGGSAL AI+ L ++GV E R+ F  VV CPEGLA L++  PKV +VT AVD+ LD R+YI+PGLGDFGDR
Sbjct:   65 TLTTGSAVVVPERDICLVDIMRSGAILQEAVRRVVPGAKTAKILIQRDEETAQ--PVLMYSKLPPKIEAMNVLLCDPMLATGGSALTAIKVLKDAGVPEERITFANVVSCPEGLANLKKHAPKVVVVTSAVDEGLDARRYIVPGLGDFGDR 213          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: D0MVH7_PHYIT (Uracil phosphoribosyltransferase, putative n=20 Tax=Phytophthora TaxID=4783 RepID=D0MVH7_PHYIT)

HSP 1 Score: 169 bits (429), Expect = 5.120e-50
Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 1
Query:   19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQ-VLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
            +G+A+  +  Q I TPT  +F+ + V    VC VSI+RAGD+L ++   C P   VGKILIQRDE+S+DKHPV++Y KLP  +  +  VLL DPMLATGGS  MAI+TL+++GV++ ++ FL V+ CPEGLA L   +P V +VT  +D  L+  KYILPGLGD+GDR
Sbjct:   56 EGLAACANKTQTIVTPTGDSFTGL-VPAEKVCAVSIIRAGDSLLQSIIECDPTVSVGKILIQRDEKSEDKHPVMYYSKLPPNVEKLDNVLLVDPMLATGGSVNMAIKTLIDAGVEQRKITFLNVISCPEGLATLFNAYPDVKVVTAGLDIGLNAYKYILPGLGDYGDR 222          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S2S9S7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9S7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.000e-49
Identity = 88/169 (52.07%), Postives = 116/169 (68.64%), Query Frame = 1
Query:   19 QGIASL-ESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
            +GIA L +  R  +   T A F    V   NVC VSI+RAGD+L EA ++C P   VGKILIQRDE + +K P LFY KLP  +  M VLL DPMLATGGS+ MAI++L++ GV+E  ++FL V+ CPEGL A+ + FP V I+T  +D  +++ KYI+PGLGD+GDR 
Sbjct:   90 EGIALLPKEQRNIVCRGTKAAFQGEVVPLDNVCAVSIVRAGDSLLEAVRACSPGMKVGKILIQRDESTAEKLPKLFYCKLPPGVEHMHVLLVDPMLATGGSSKMAIQSLVDRGVREEHIIFLNVISCPEGLKAVHDTFPGVKILTTCIDQGMNDHKYIVPGLGDYGDRF 258          
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S3V2X3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2X3_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.390e-49
Identity = 80/137 (58.39%), Postives = 102/137 (74.45%), Query Frame = 1
Query:  109 VCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
            +C VSI+R+GD L EA +   P   VGKILIQRDE   +K P LFY KLP  + + +VLLCDPMLATGGSA+ A+  L+++GVK   +VFL  V CPEG++A   +FP+V IVT A+DDCL++ KYI+PGLGDFGDR
Sbjct:   91 ICAVSIMRSGDILLEAVRRVDPRVTVGKILIQRDEADPEKRPKLFYSKLPPDVAECEVLLCDPMLATGGSAICAVSVLIKAGVKPENLVFLNTVCCPEGISAFHAKFPQVKIVTLAIDDCLNDDKYIVPGLGDFGDR 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGF2_ECTSI4.800e-9283.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6K4_9PHAE5.480e-9082.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UE47_9STRA4.270e-5351.79Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2LGL4_9STRA1.580e-5254.78Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8K1CII0_PYTOL5.540e-5252.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A836CLB7_9STRA3.530e-5151.48Uracil phosphoribosyltransferase-domain-containing... [more]
F0XXG3_AURAN4.970e-5058.94Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
D0MVH7_PHYIT5.120e-5052.38Uracil phosphoribosyltransferase, putative n=20 Ta... [more]
A0A7S2S9S7_9STRA2.000e-4952.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3V2X3_9STRA2.390e-4958.39Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20239contigH-elongata_contig20239:1783..3294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.2
Seed ortholog evalue3.3e-73
Seed eggNOG ortholog2880.D8LGF2
KEGG rclassRC00002,RC00017,RC00063
KEGG koko:K00761,ko:K00876
KEGG ReactionR00513,R00516,R00517,R00962,R00964,R00966,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
EggNOG free text desc.UMP salvage
EggNOG OGsCOG0572@1,KOG4203@2759
EC2.4.2.9,2.7.1.48
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size525
Cds size525
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20239.5729.1prot_H-elongata_contig20239.5729.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20239 1783..3294 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930138.289112-CDS-H-elongata_contig20239:1782..19741622930138.289112-CDS-H-elongata_contig20239:1782..1974Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20239 1783..1974 +
1691679295.6509118-CDS-H-elongata_contig20239:1782..19741691679295.6509118-CDS-H-elongata_contig20239:1782..1974Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20239 1783..1974 +
1622930138.3310425-CDS-H-elongata_contig20239:2484..26941622930138.3310425-CDS-H-elongata_contig20239:2484..2694Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20239 2485..2694 +
1691679295.6615427-CDS-H-elongata_contig20239:2484..26941691679295.6615427-CDS-H-elongata_contig20239:2484..2694Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20239 2485..2694 +
1622930138.3516142-CDS-H-elongata_contig20239:3171..32941622930138.3516142-CDS-H-elongata_contig20239:3171..3294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20239 3172..3294 +
1691679295.6713285-CDS-H-elongata_contig20239:3171..32941691679295.6713285-CDS-H-elongata_contig20239:3171..3294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20239 3172..3294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20239.5729.1

>prot_H-elongata_contig20239.5729.1 ID=prot_H-elongata_contig20239.5729.1|Name=mRNA_H-elongata_contig20239.5729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
ILLSLSQGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALA
EAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPM
LATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVT
GAVDDCLDERKYILPGLGDFGDRL*
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mRNA from alignment at H-elongata_contig20239:1783..3294+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20239.5729.1 ID=mRNA_H-elongata_contig20239.5729.1|Name=mRNA_H-elongata_contig20239.5729.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1512bp|location=Sequence derived from alignment at H-elongata_contig20239:1783..3294+ (Himanthalia elongata Himel1 dioecious)
ATTTTGCTGTCGCTGTCACAGGGCATCGCGTCTCTGGAGTCCACCCGGCA GTTCATCACGACGCCCACTGCCGCCACGTTCTCGAGTGTGTTCGTCGACG AGAGCAACGTGTGCGTAGTTTCGATCCTCCGGGCCGGGGACGCTCTCGCG GAGGCCGCGCAGTCGTGCATACCCCACGCGCCTGTCGGGAAGGTTCGAGT CCATTTTCCCTTTTTCGTCTTGTTAAGAGAGAAAACATATGTTTATATGT ATGGATAAGCGTTACACGACCGTGTAGTCCACTTCTTCACTCGTCCGTAT CGTGCACTTGGTACGATGGCTGACCCGAAAGGCAAAACTATAGCCACGAC TCCTGTCTTTTTTTTTCTCGTGTGTGTGTGTGTGTGTGTGTGTGCTCGTC TTTTAATGAGTAGTGTTTTGAAACATTTGTGTCTCTTTTGGACGGTGTTG ATTGAAAAAACGTGGGCTCGACGCACTGCTGGGAGCGAAGCACACGAGTT TCAGTAATTGCCACGAACCAAGAACCGTTCGTGTCCGCATCGAGTCAAGG CGCCAGGTGGCTCCTGCCGGAGAGTGGATATTTTGGCTCAGAGGCACACC ACGGTATTCAACTCGTAGGAGGGAAGCACGCGCTCTTCGACGCCTGTGAT CTCCCACAGACTCGTATCCGTCTAATATTGTTCTGTTCTGTTTCTTCGGC AGATCCTCATCCAGCGCGACGAAGAATCGAAGGACAAGCACCCAGTGCTC TTCTACAAGAAGCTTCCGACGAAGATCCCCGACATGCAGGTGCTCCTGTG TGACCCGATGCTCGCCACCGGCGGAAGCGCTCTGATGGCGATTCGAACCC TGATGGAATCGGGAGTCAAGGAGTCGAGGGTGGTATTCCTGACGGTGGTG GTTTGTCCTGAGGTGACCCCCACCCCCCCCCACCTCATCAATCCCGGTTG TTTCTGTGCTGGGTGCCCTGTTCGTGTGGTGTAACGTTTTTTGCGTGTTT TCCGTTTGGAAAAACCCTTTGCCGTCGGTTTCGTGGGTGAATGCAGAGGC GCGGTGTCTCCCTTCAGTGGGAAGACAAGAGAAATTTGGAGTGTGGAACG CCTTCCACACCTTGCAGAGGCGGTTTTCATCAACTTCCGTTTTTTAAAAT AAAGCCGCAACGTTTGGCTTGTTTGTTTACCAAAGACATATTATTGTCCG TGTCCAGTATATCATCTCGTCCGCCTTTGCATGTGAAGACGACACTTAAA AATATAAACATAAATATATAATTGACTCTAAAAAGCTGTTGTATTTTGTT GCCGTTTTTTCTTGAAGAGGCGTGACGTCGTTGGACACCCACATATTCCC CGAACTTTCTTCTCCTTCCTCTTATTTTTTCCTACTCAGGGCCTGGCAGC ACTGCGAGAAGAATTCCCAAAGGTGACAATCGTCACGGGAGCGGTGGACG ACTGCCTCGACGAGCGGAAATACATCCTGCCTGGCCTTGGAGATTTCGGC GACAGATTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig20239:1783..3294+

>mRNA_H-elongata_contig20239.5729.1 ID=mRNA_H-elongata_contig20239.5729.1|Name=mRNA_H-elongata_contig20239.5729.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig20239:1783..3294+ (Himanthalia elongata Himel1 dioecious)
ATTTTGCTGTCGCTGTCACAGGGCATCGCGTCTCTGGAGTCCACCCGGCA
GTTCATCACGACGCCCACTGCCGCCACGTTCTCGAGTGTGTTCGTCGACG
AGAGCAACGTGTGCGTAGTTTCGATCCTCCGGGCCGGGGACGCTCTCGCG
GAGGCCGCGCAGTCGTGCATACCCCACGCGCCTGTCGGGAAGATTTTGCT
GTCGCTGTCACAGGGCATCGCGTCTCTGGAGTCCACCCGGCAGTTCATCA
CGACGCCCACTGCCGCCACGTTCTCGAGTGTGTTCGTCGACGAGAGCAAC
GTGTGCGTAGTTTCGATCCTCCGGGCCGGGGACGCTCTCGCGGAGGCCGC
GCAGTCGTGCATACCCCACGCGCCTGTCGGGAAGATCCTCATCCAGCGCG
ACGAAGAATCGAAGGACAAGCACCCAGTGCTCTTCTACAAGAAGCTTCCG
ACGAAGATCCCCGACATGCAGGTGCTCCTGTGTGACCCGATGCTCGCCAC
CGGCGGAAGCGCTCTGATGGCGATTCGAACCCTGATGGAATCGGGAGTCA
AGGAGTCGAGGGTGGTATTCCTGACGGTGGTGGTTTGTCCTGAGATCCTC
ATCCAGCGCGACGAAGAATCGAAGGACAAGCACCCAGTGCTCTTCTACAA
GAAGCTTCCGACGAAGATCCCCGACATGCAGGTGCTCCTGTGTGACCCGA
TGCTCGCCACCGGCGGAAGCGCTCTGATGGCGATTCGAACCCTGATGGAA
TCGGGAGTCAAGGAGTCGAGGGTGGTATTCCTGACGGTGGTGGTTTGTCC
TGAGGGCCTGGCAGCACTGCGAGAAGAATTCCCAAAGGTGACAATCGTCA
CGGGAGCGGTGGACGACTGCCTCGACGAGCGGAAATACATCCTGCCTGGC
CTTGGAGATTTCGGCGACAGATTGTGAGGCCTGGCAGCACTGCGAGAAGA
ATTCCCAAAGGTGACAATCGTCACGGGAGCGGTGGACGACTGCCTCGACG
AGCGGAAATACATCCTGCCTGGCCTTGGAGATTTCGGCGACAGATTGTGA
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