mRNA_H-elongata_contig20239.5729.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: D8LGF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF2_ECTSI) HSP 1 Score: 281 bits (718), Expect = 4.800e-92 Identity = 140/168 (83.33%), Postives = 158/168 (94.05%), Query Frame = 1
Query: 19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
+GIA LES+RQFITTPTAATFSS FV+ESNVC+VSILRAGDALAEAA++CIP APVGKILIQRDEES DKHPVLFYKKLP+KI MQVLLCDPMLATGGSALMAIR L+E+GVKE+ +VF+TVVVCPEG+ A+R EFP+VTIVTGA+DDCLDE++YILPGLGDFGDRL
Sbjct: 148 EGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIGKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRL 315
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A6H5L6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K4_9PHAE) HSP 1 Score: 280 bits (715), Expect = 5.480e-90 Identity = 139/168 (82.74%), Postives = 157/168 (93.45%), Query Frame = 1
Query: 19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
+GIA LES+RQFITTPTAATFSS FV+ESNVC+VSILRAGDALAEAA++CIP APVGKILIQRDEES DKHPVLFYKKLP+KI MQVLLCDPMLATGGSALMAIR L+E+GVKE+ +VF+TVVVCPEG+ A+R EFP+VTIVTGA+DDCLDE++YILPGLGDFGDR
Sbjct: 310 EGIACLESSRQFITTPTAATFSSPFVNESNVCIVSILRAGDALAEAARACIPTAPVGKILIQRDEESSDKHPVLFYKKLPSKIAKMQVLLCDPMLATGGSALMAIRCLVEAGVKEAAIVFITVVVCPEGIGAVRAEFPEVTIVTGAMDDCLDEKRYILPGLGDFGDRF 477
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S2UE47_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UE47_9STRA) HSP 1 Score: 176 bits (447), Expect = 4.270e-53 Identity = 87/168 (51.79%), Postives = 120/168 (71.43%), Query Frame = 1
Query: 25 IASLESTRQFITTPTAATFS-SVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLM-ESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
IA L+++ I TP F + VD++ +C VSI+RAGD+L EA + C+P PVGKILIQRDEES K LFY K+P + DM ++LCDPMLATGGSA+ AI TL+ E GV S ++F ++ CPEGL ++ +P++ IVT +D+CL+++KYI+PGLGD+GDR
Sbjct: 30 IAELQTSPITIQTPCVDQFEGTAVVDKNQICAVSIVRAGDSLLEAVRECLPGVPVGKILIQRDEESPGKEAKLFYAKMPPGVKDMTIILCDPMLATGGSAMKAIETLVSEFGVSPSNILFANMICCPEGLLSMATAYPQIKIVTACIDECLNDQKYIVPGLGDYGDRF 197
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S2LGL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL4_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.580e-52 Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 55 ITTPTAATFSSV-FVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
ITTP + + N+CVVSI+RAGD+L EA ++C+P +GKILIQR+EE+ +K P L+Y KLP +I DM VLLCDPMLATGGSA A+ L + GV S ++F+ V+ CPEGL L E+ P V +VT VD+CL+E KYI+PGLGD+GDR
Sbjct: 60 ITTPCSPNIEGKELMSVDNICVVSIVRAGDSLMEAVRACLPGVSIGKILIQRNEETTEKLPTLYYSKLPPRIKDMNVLLCDPMLATGGSAKAALDVLTKHGVLLSNIIFVNVICCPEGLQRLAEDVPDVKVVTACVDECLNENKYIVPGLGDYGDRF 216
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A8K1CII0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CII0_PYTOL) HSP 1 Score: 174 bits (442), Expect = 5.540e-52 Identity = 88/168 (52.38%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQ-VLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
+G+A+ + + + TPT F+ + V ++++C VSI+RAGD+L +A C P VGKILIQRDE S DKHP+LFY KLP +I VL+ DPMLAT GS L+AI+TL+++GV E ++VFL V+ CPEG+ L + +P V +VT AVD L+E KYI+PGLGD+GDR
Sbjct: 56 EGLATCATVSETVKTPTGDAFTGL-VPQAHICAVSIIRAGDSLLDAVMKCDPTVSVGKILIQRDESSHDKHPMLFYSKLPPQIASYDHVLVVDPMLATAGSVLLAIKTLIDAGVAEEKIVFLNVISCPEGIHTLFKAYPNVKVVTAAVDRGLNEHKYIVPGLGDYGDR 222
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A836CLB7_9STRA (Uracil phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB7_9STRA) HSP 1 Score: 172 bits (436), Expect = 3.530e-51 Identity = 87/169 (51.48%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 19 QGIASLESTRQFITTPTAATF-SSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
+ +A L + + ITTPT AT +V ++ S VC VSI+RAGD+L EA + P VGKILIQRDE S DKHPV++Y K P I M V+LCDPMLATGGS +MA+ TL+++G + ++F V+ PEG+ A+ P V IVT +D L++ KYI+PGLGDFGDR
Sbjct: 46 EAMAMLPAQQVSITTPTGATLPDAVRINTSKVCAVSIIRAGDSLLEAVRKIAPDVHVGKILIQRDESSADKHPVMYYHKFPLGIARMPVILCDPMLATGGSVIMAVNTLLDAGCRAESIIFANVIAAPEGIEAVSSAHPAVRIVTCVIDASLNDNKYIMPGLGDFGDRF 214
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: F0XXG3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG3_AURAN) HSP 1 Score: 169 bits (429), Expect = 4.970e-50 Identity = 89/151 (58.94%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 67 TAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
T T S+V V E ++C+V I+R+G L EA + +P A KILIQRDEE+ PVL Y KLP KI M VLLCDPMLATGGSAL AI+ L ++GV E R+ F VV CPEGLA L++ PKV +VT AVD+ LD R+YI+PGLGDFGDR
Sbjct: 65 TLTTGSAVVVPERDICLVDIMRSGAILQEAVRRVVPGAKTAKILIQRDEETAQ--PVLMYSKLPPKIEAMNVLLCDPMLATGGSALTAIKVLKDAGVPEERITFANVVSCPEGLANLKKHAPKVVVVTSAVDEGLDARRYIVPGLGDFGDR 213
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: D0MVH7_PHYIT (Uracil phosphoribosyltransferase, putative n=20 Tax=Phytophthora TaxID=4783 RepID=D0MVH7_PHYIT) HSP 1 Score: 169 bits (429), Expect = 5.120e-50 Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 19 QGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQ-VLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
+G+A+ + Q I TPT +F+ + V VC VSI+RAGD+L ++ C P VGKILIQRDE+S+DKHPV++Y KLP + + VLL DPMLATGGS MAI+TL+++GV++ ++ FL V+ CPEGLA L +P V +VT +D L+ KYILPGLGD+GDR
Sbjct: 56 EGLAACANKTQTIVTPTGDSFTGL-VPAEKVCAVSIIRAGDSLLQSIIECDPTVSVGKILIQRDEKSEDKHPVMYYSKLPPNVEKLDNVLLVDPMLATGGSVNMAIKTLIDAGVEQRKITFLNVISCPEGLATLFNAYPDVKVVTAGLDIGLNAYKYILPGLGDYGDR 222
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S2S9S7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9S7_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.000e-49 Identity = 88/169 (52.07%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 19 QGIASL-ESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDRL 522
+GIA L + R + T A F V NVC VSI+RAGD+L EA ++C P VGKILIQRDE + +K P LFY KLP + M VLL DPMLATGGS+ MAI++L++ GV+E ++FL V+ CPEGL A+ + FP V I+T +D +++ KYI+PGLGD+GDR
Sbjct: 90 EGIALLPKEQRNIVCRGTKAAFQGEVVPLDNVCAVSIVRAGDSLLEAVRACSPGMKVGKILIQRDESTAEKLPKLFYCKLPPGVEHMHVLLVDPMLATGGSSKMAIQSLVDRGVREEHIIFLNVISCPEGLKAVHDTFPGVKILTTCIDQGMNDHKYIVPGLGDYGDRF 258
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Match: A0A7S3V2X3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2X3_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.390e-49 Identity = 80/137 (58.39%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 109 VCVVSILRAGDALAEAAQSCIPHAPVGKILIQRDEESKDKHPVLFYKKLPTKIPDMQVLLCDPMLATGGSALMAIRTLMESGVKESRVVFLTVVVCPEGLAALREEFPKVTIVTGAVDDCLDERKYILPGLGDFGDR 519
+C VSI+R+GD L EA + P VGKILIQRDE +K P LFY KLP + + +VLLCDPMLATGGSA+ A+ L+++GVK +VFL V CPEG++A +FP+V IVT A+DDCL++ KYI+PGLGDFGDR
Sbjct: 91 ICAVSIMRSGDILLEAVRRVDPRVTVGKILIQRDEADPEKRPKLFYSKLPPDVAECEVLLCDPMLATGGSAICAVSVLIKAGVKPENLVFLNTVCCPEGISAFHAKFPQVKIVTLAIDDCLNDDKYIVPGLGDFGDR 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20239.5729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20239.5729.1 >prot_H-elongata_contig20239.5729.1 ID=prot_H-elongata_contig20239.5729.1|Name=mRNA_H-elongata_contig20239.5729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp ILLSLSQGIASLESTRQFITTPTAATFSSVFVDESNVCVVSILRAGDALAback to top mRNA from alignment at H-elongata_contig20239:1783..3294+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20239.5729.1 ID=mRNA_H-elongata_contig20239.5729.1|Name=mRNA_H-elongata_contig20239.5729.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1512bp|location=Sequence derived from alignment at H-elongata_contig20239:1783..3294+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20239:1783..3294+ >mRNA_H-elongata_contig20239.5729.1 ID=mRNA_H-elongata_contig20239.5729.1|Name=mRNA_H-elongata_contig20239.5729.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig20239:1783..3294+ (Himanthalia elongata Himel1 dioecious)back to top |