mRNA_H-elongata_contig20210.5720.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: D8LE79_ECTSI (Kynurenine/Oxoglutarate Transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE79_ECTSI) HSP 1 Score: 283 bits (723), Expect = 7.320e-90 Identity = 135/163 (82.82%), Postives = 154/163 (94.48%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRVENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPRV 489
GFPNW+PP+FVVAAA A+S+GFHQYTRTAGHPRLVQLLAKRYSKH GRE+DPF++VAIT+GAS+ALYV+FQAILSPGDEVVLLEPFFDLYLGQIR+AGGV +QVPL V + EWRLD++ALRRAIS RTRAIVVNTPHNPTGKVFSR+ELE IADVV++NPR+
Sbjct: 108 GFPNWNPPDFVVAAAQKALSEGFHQYTRTAGHPRLVQLLAKRYSKHFGREVDPFSQVAITIGASQALYVSFQAILSPGDEVVLLEPFFDLYLGQIRMAGGVAKQVPLSVVDGEWRLDAEALRRAISPRTRAIVVNTPHNPTGKVFSRQELEAIADVVRENPRL 270
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A836CN57_9STRA (Aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN57_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.030e-73 Identity = 109/162 (67.28%), Postives = 136/162 (83.95%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRVENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPR 486
GFPNW+PP+FV A AI+ G +QYTRTAGHPRLV+LLA RY+KH GRE+DP+AEVAIT+GAS+ALYVT Q +LSPGDEV+LLEPFFDLY+GQI +AGG P VPL E + WRLD+ ALR AI+ RTRAI++N+PHNPTGKVF+R+E+ +AD ++ +PR
Sbjct: 38 GFPNWEPPQFVTDAGIAAITSGHNQYTRTAGHPRLVELLAGRYTKHFGREVDPYAEVAITIGASQALYVTMQVLLSPGDEVILLEPFFDLYVGQIEMAGGTPVYVPLATEGQRWRLDAAALRAAITPRTRAIILNSPHNPTGKVFTRDEMLAVADAIRAHPR 199
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7S2UU85_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU85_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.900e-73 Identity = 107/163 (65.64%), Postives = 139/163 (85.28%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRVENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPRV 489
GFPNWDPP+FVV AAH AI GFHQYTRT+GH RLV LLA+RY++HL RE+D EVA+TVGAS+AL+V Q ++ PGDEV+LLEPFFDLY+GQIRLAGGVP+ VPL V++ EW LD+D L++A+ RT+ I++NTPHNPTGKVF+R+E++ +A+VV+ NP++
Sbjct: 60 GFPNWDPPQFVVDAAHHAIEKGFHQYTRTSGHQRLVDLLARRYTQHLRREVDANNEVAVTVGASQALFVALQVLVKPGDEVILLEPFFDLYVGQIRLAGGVPKFVPLVVQDEEWVLDADLLKKAVGPRTKVIMMNTPHNPTGKVFTRDEMDAVAEVVRQNPQL 222
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7S3ZJ27_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZJ27_9EUKA) HSP 1 Score: 219 bits (559), Expect = 1.900e-66 Identity = 101/163 (61.96%), Postives = 132/163 (80.98%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRVENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPRV 489
G+P+W+PPEFV +A +AI+ G++QYTRT GHP LV+ LAKRYS HL RE+DP E+A+TVG S+ALY++ A+L PGDEV+LLEPFFDLYLGQ++LAGG P VPL ++ +W LD L +I+ RT+AI++NTPHNPTGKVFS EE+E IADVV+ +P+V
Sbjct: 60 GYPDWEPPEFVRRSASEAIALGYNQYTRTQGHPELVETLAKRYSTHLHREVDPLNEIAVTVGCSQALYLSLTALLEPGDEVILLEPFFDLYLGQVKLAGGTPVTVPLNLKQGKWELDVAKLESSITDRTKAIILNTPHNPTGKVFSPEEMESIADVVRRHPQV 222
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7S1P7X2_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P7X2_9ALVE) HSP 1 Score: 206 bits (524), Expect = 1.890e-62 Identity = 99/185 (53.51%), Postives = 134/185 (72.43%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRV------ENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPR---VRQDTFLHLDFSSP 528
GFPNW PP FV+AAAH A++ HQYTRTAGHP LV+LLA++YS+H R+ID EVA+T+GAS+ALYV Q++LS GDEV+L+EPFF+LY GQ+RLAGGVPR VP+ + WR+D D LR+ I+ TR I++NTP NP+GKV+ R ELE +A +V+++P + + + + F P
Sbjct: 92 GFPNWQPPSFVLAAAHGALTGPHHQYTRTAGHPPLVELLAEKYSRHFDRDIDADTEVAVTIGASQALYVAMQSLLSAGDEVILMEPFFNLYDGQVRLAGGVPRYVPMDWREGSGGQRGSWRVDFDVLRQQINPLTRLIILNTPQNPSGKVWERSELEELASIVREHPNLMVISDEVYKFMVFDEP 276
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7R9U8K3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K3_9STRA) HSP 1 Score: 206 bits (525), Expect = 4.350e-61 Identity = 100/163 (61.35%), Postives = 125/163 (76.69%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISD----GFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRVENRE-WRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQ 474
G+P+W PPEFV A ++ G HQYTRTAGHPRLV LLAKRYSKH GRE+D EV++TVGA++ALY+ Q +L PGDEV++LEP+FDLY+GQI+ +GGVP VPL ++ E WRLD+ AL RAI+ TR I+VNTPHNPTG +FSR ELE IAD+ +
Sbjct: 91 GYPDWSPPEFVRKAGAQVLAPDAPPGVHQYTRTAGHPRLVNLLAKRYSKHFGRELDGLKEVSVTVGATQALYLCLQTLLHPGDEVLVLEPYFDLYIGQIKASGGVPVAVPLSLDMSEGWRLDTAALERAITRDTRVIIVNTPHNPTGTIFSRAELEAIADIAE 253
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A0G4FZQ8_VITBC (Aminotran_1_2 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FZQ8_VITBC) HSP 1 Score: 206 bits (524), Expect = 7.370e-61 Identity = 99/185 (53.51%), Postives = 134/185 (72.43%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRV------ENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPR---VRQDTFLHLDFSSP 528
GFPNW PP FV+AAAH A++ HQYTRTAGHP LV+LLA++YS+H R+ID EVA+T+GAS+ALYV Q++LS GDEV+L+EPFF+LY GQ+RLAGGVPR VP+ + WR+D D LR+ I+ TR I++NTP NP+GKV+ R ELE +A +V+++P + + + + F P
Sbjct: 88 GFPNWQPPSFVLAAAHGALTGPHHQYTRTAGHPPLVELLAEKYSRHFDRDIDADTEVAVTIGASQALYVAMQSLLSAGDEVILMEPFFNLYDGQVRLAGGVPRYVPMDWREGSGGQRGSWRVDFDVLRQQINPLTRLIILNTPQNPSGKVWERSELEELASIVREHPNLMVISDEVYKFMVFDEP 272
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7S1DP74_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DP74_HEMAN) HSP 1 Score: 203 bits (516), Expect = 3.020e-60 Identity = 98/166 (59.04%), Postives = 129/166 (77.71%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDG--FHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRVENRE-WRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPRV 489
GFPNW PP+FVV AA A+S G HQYTRTAGHP L LLA RYS HLGR + P +EVA+TVGAS+AL++T Q ++ GDEV+LLEPFFDLY+GQIRLAGG P PL+ + + + LD D LR I+ +T+ +++N+PHNPTGKVF+++E+E IA VV++NP++
Sbjct: 71 GFPNWSPPDFVVEAAVQAVSKGGAAHQYTRTAGHPPLCALLAARYSMHLGRTVIPDSEVAVTVGASQALFLTLQTLVEQGDEVLLLEPFFDLYIGQIRLAGGTPTYCPLQPNSSKGFELDIDLLRSKITPKTKVLILNSPHNPTGKVFNKDEMEAIAQVVRENPQI 236
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7S2B3V4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3V4_9STRA) HSP 1 Score: 204 bits (519), Expect = 8.350e-60 Identity = 103/167 (61.68%), Postives = 126/167 (75.45%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGGVPRQVPLRV----ENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPRV 489
GFP++ PP+FV AA+ AIS HQYTR AGHP LV LLA+RYS HLGR IDP AEVA+TVG S+ALYV+ Q ++ PGDEVVL EPFFDLYLGQI +AGG PR VPL+ + W LD DAL AI +T A+V+N+PHNPTGKVF+ +E++ IA VV+ PR+
Sbjct: 111 GFPDFAPPDFVRVAAYTAISKDCHQYTRPAGHPPLVNLLAERYSSHLGRTIDPMAEVAVTVGCSQALYVSMQCLVKPGDEVVLFEPFFDLYLGQISMAGGSPRFVPLKPAPPSSSSAWDLDIDALEAAIGPKTCALVLNSPHNPTGKVFTPDEMKAIAAVVRKWPRI 277
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Match: A0A7S0NX39_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NX39_9EUKA) HSP 1 Score: 201 bits (510), Expect = 3.670e-59 Identity = 92/165 (55.76%), Postives = 130/165 (78.79%), Query Frame = 1
Query: 1 GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREIDPFAEVAITVGASEALYVTFQAILSPGDEVVLLEPFFDLYLGQIRLAGG--VPRQVPLRVENREWRLDSDALRRAISSRTRAIVVNTPHNPTGKVFSREELEMIADVVQDNPRV 489
GFP+W PPEFVV A++A+ +G +QYTR AGHP LV++LA+RYS HL R + EVA+TVGAS+ALY+T QA+++PG+EV+LLEP FDLY GQ++LAG VP + + EWRLD+DAL AI+ RT+ +++N+PHNPTGKVF+ +E+E IA++V+ +P++
Sbjct: 108 GFPDWQPPEFVVEQAYEALGNGHNQYTRPAGHPALVEVLAERYSHHLQRNVCAMTEVAVTVGASQALYITLQALVNPGEEVLLLEPAFDLYYGQVKLAGASVVPVALQFEPQEGEWRLDADALEAAITPRTKLLILNSPHNPTGKVFTEDEMEAIAEIVRRHPQL 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20210.5720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20210.5720.1 >prot_H-elongata_contig20210.5720.1 ID=prot_H-elongata_contig20210.5720.1|Name=mRNA_H-elongata_contig20210.5720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp GFPNWDPPEFVVAAAHDAISDGFHQYTRTAGHPRLVQLLAKRYSKHLGREback to top mRNA from alignment at H-elongata_contig20210:64..1761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20210.5720.1 ID=mRNA_H-elongata_contig20210.5720.1|Name=mRNA_H-elongata_contig20210.5720.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1698bp|location=Sequence derived from alignment at H-elongata_contig20210:64..1761- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20210:64..1761- >mRNA_H-elongata_contig20210.5720.1 ID=mRNA_H-elongata_contig20210.5720.1|Name=mRNA_H-elongata_contig20210.5720.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1074bp|location=Sequence derived from alignment at H-elongata_contig20210:64..1761- (Himanthalia elongata Himel1 dioecious)back to top |