mRNA_H-elongata_contig20187.5709.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A6H5L7S8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7S8_9PHAE) HSP 1 Score: 713 bits (1841), Expect = 1.520e-245 Identity = 433/760 (56.97%), Postives = 518/760 (68.16%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERT-VLGLSIDSGGT--SQGKDGGALERRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLE-TSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVS--------------AVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSAL--------------------GRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPA---FESGEG--ADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEGVSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFVDHRRLERDFPHLLEEEVDVAPVADERHGAADEEMDENSICSAQ--NTVNDVESSRAGTK-TPKLPMGQFRGDSDLAQ------EDMPVTIVVKADSANTLASILDAFDDWSEIKIS-ENGGDEALPEVVAADRALEDQGHGGKHRRQWGEGDLQHKPRQRLLVSVARSGIGAVTSSDVRLARDCECPVFAHSVAPDTSASRELKRIGGGLIAALPEGTAWKRGIQ---GVGGQEGFIGRAGEGRACVVVSETVGELLGEIERFVLRVR 2113
RELA+LLR+KP+ +FKS+GGYQE+K HR+VL GVPYAFP LGN++VPF+D Q +A+ L K FLD+EKKP+R +L S DS +G+ G RRPVV LLGHFNHGKTTILDAL GP SGIA+RE GGITQEIRAR V LE TS + +N + + KVAT LDTPGQEIFYRMRTNGA VADA+VLVVS AVDGVCLQTSESIGCAEELGLP VVVLNKIDLLP + A +R+ LS EVRE+VA++ A+V+P+SA TG GLD LR++L AL G + SE P +G + + P RP + +V S EG A G + + EAPE AAT TVLDY SAKTGKMLLVLVDRGVLRPGD FVSG WG+VR ++DEEG L++AG GVAAKVV+ RT + DAPLGEPFRVLT+EAAE+VA VR+LAR I NFVDH +L+R F HLL + D ++ H +DE+ D+ + Q T +DV+ S K T + P R S+L Q EDMPVTIVVK D+ANTLAS+LDA DW ++ S EN G++ E ++ + K ++W E DLQHK R+RLLVSVA SG+GAVTSSDVRLARDCECPVFAH+V D SA+RELKR+GGG++ ALPEG A G + G+GGQEGFIGRAGEGR CVVVSETVGELLGEIERFVLRVR
Sbjct: 119 RELASLLRVKPRALFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGRPAGQ-GRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQNTNDDDGAASLRSRSA--KVATILDTPGQEIFYRMRTNGARVADAVVLVVSVALCANFVLVSVSAAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPNEVAAQRVKELSAEVREYVAIQDAKVLPLSAHTGFGLDNLRTSLADALNQSFPQKERVYPTMADLEGFGLQPGQSETFPDLGIPGVDPDPA--PPVRPTESEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKMLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSDAPLGEPFRVLTKEAAEQVAQVRLLARTIDNFVDHNKLDRGFAHLLRGDEDDDDLS---HDGSDED-DQPGRPAEQPVGTGDDVDYSETTLKSTARSPEPSSRRRSNLEQQEELAPEDMPVTIVVKTDNANTLASVLDALGDWGDVDNSTENVGEQLAAEASDSNPEGVLERVRRKKPQEWREDDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDASATRELKRVGGGVVPALPEGAAAAVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR 869
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A835Z5U4_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U4_9STRA) HSP 1 Score: 268 bits (686), Expect = 3.900e-75 Identity = 244/802 (30.42%), Postives = 327/802 (40.77%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRP--------VVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKV---------------------------------------------------ATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLP-----KKDAEE------------------------RLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPE----------------------DAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEG-VSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVA----LVRMLARKIGNFVDHRRLERDFPHLLEE------------------------------------EVDVAPVADERHGAADEEMDENSICSAQNTVNDVESS-------RAGTKTPKLPMGQFRGDSDLAQEDMPVTIVVKADSANTLASILDAFDDWSEIKISENGGDEALPEVVAADRALEDQGHGGKHRRQWGEGDLQHKPRQRLLVSVARSGIGAVTSSDVRLARDCECPVFAHSVAPDTSASRELKR 1933
+ELA LR+ K FK+LGG + R+ + + L P++FP L IVP+ED A L + +L E P +ERRP VV LLGHFNHGKTT+LDALLGPDS IA EA GITQEIRAR V L ATFLDTPGQ+IFYRMR GA VAD V+VVSAVDGVC QT ESIGC ++LGLP VV + K+DL+ +++ +E R+ L++E+ EFVAL A VVP+SA TG G+D LR + + L + + IG++ E E DV ++ EG +G R A + + A A+V+DYV S + G + +LV G L PG FV+G +WG++R ++DE G AA+V V PLGEPF V+ E A A L LAR D LE D + E DV DE AA E + + A V+ R G + + G+ E + +V+KAD+AN+LA++LDA D+ +I++ G A ++V + R ++ L K + + V +GIG VT SDVR A CPVFA + D R +R
Sbjct: 10 KELAKALRVNAKAAFKALGGVRARRKYHLPLQCGPHSFPSLAAAIVPYEDAVKAAAALKREVQYLATEPAP----------------------MERRPPRGPPEAPVVVLLGHFNHGKTTLLDALLGPDSRIAAGEACGITQEIRARTVQLLDDADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATFLDTPGQDIFYRMRAGGAEVADLAVVVVSAVDGVCQQTGESIGCLDDLGLPAVVAVTKVDLVAGGGRRRRETKEPFEQSAPHVHVARSLTHACSLATQRVRKLARELHEFVALNGAPVVPVSAVTGAGMDDLRRTISAVLSEQMQAGA-AVDIGSSGGGGES-----ESAADVAATGSDACEGTNGVRATXXXAADPGGRPAEGAVTAKIAAAXXXXAEPAQASVIDYVTSPQLGARMTLLVHAGALAPGAHFVTGGAWGYIRAVYDEVGGAXXXXXXXXXXAAQVAVKLLGGARQVPLGEPFTVMPAERARTAAHTHRLADALARHASRGRDRAVLEPDAAATVXXXXXXXXXXXXXXXXXRFARDDWEXXXXXXXXXXXXXEGDVLDEGDEGDWAAGESDADAELALADGAERGVDGDGGASGALRDGERGAE-EQGEXXXXXXXEPELLCTPVVLKADTANSLAALLDAIDENRDIQV---GAAAAAAQLVYSKRTYRERA------------PLYGKAKLVAMDMVISAGIGIVTESDVRAADAARCPVFAFNARADAGGRRLARR 767
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A484EFS0_BRELC (Tr-type G domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFS0_BRELC) HSP 1 Score: 193 bits (491), Expect = 2.200e-49 Identity = 186/643 (28.93%), Postives = 271/643 (42.15%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRPVVALLGHFNHGKTTILDALLGPDSG----IAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLR---SALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEGVSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFVDHRRLERDFPH-LLEEEVDVAPVADERHGAADEEMDENSICSAQNTVNDVESSRAGTKTPKLPMGQFRGDSDLAQEDMPV---TIVVKADSANTLASILDAFDDWSEIKISENGGDEALPEVVAADRALEDQGHGGKHRRQWGEGDLQHKPRQRLLVSVARSGIGAVTSSDVRLARDCECPVFAHSV 1897
R+LA LR K++ K R+ P F + I++P+ Q +A N T + DVE + LS + G +R+PV+A++GH +HGKTT++D L IA E GITQ+I E +LT N+ V TFLDTPG F+RMRTN A VADA++L+V+A +GV LQT ESIG EE GLP ++ +NK+DLL KD E++ N+ +E+R FVAL+ + VV IS +TG GLD+L+ S LV++L D R+ + P+ A VL+ V G +L VL+ G L FV+G G VR + D EG ++ A PG + ++ DAP F VL E+ A++V ++ R L +F L+ E D+ + +D+E+ T+ E S K P D D+ E + +I+VKAD A L SI D D+ + I S R GIG +++ D+ +A + ECP+F +V
Sbjct: 84 RDLAKALRQPFKDVLKRTVTKAHRRFSLKTKTHPPAEFRSVKQIVLPYRVAQEVANSFNIQTAYDDVEPRLSDVEADLSKERIG----------QRQPVIAVMGHVDHGKTTLMDTLRKQMRMELKLIAPYEKHGITQKINV----CEAALTP------------NVKV-------TFLDTPGHFHFFRMRTNAAQVADAVLLIVAADEGVLLQTEESIGALEEAGLPAIICINKVDLLDNKD--EQVENIIQELRSFVALQDSPVVRISGKTGAGLDELKHTVSMLVTSL-------------------------------------------TDNHRLNALAGPDTLADGLVLETVAIKGRGAVLRVLIKNGELVGKQHFVAGMIRGVVREMHDAEG-RDVKRALPGTVVDITYTNKSRNVDAPNEHGFFVLAEDRAKQV-------------IEQRELALEFKDCLVPNEGDLYTHPNAEIVTSDKEL----------TIKSAEVSPDDAKEPC--------DRDIIDERERIETKSIIVKADGAGALTSIQDTVDEMAGI-------------------------------------------------STVRLGIGNISTKDIDVAINGECPIFGFNV 567
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A1V9YIM9_9STRA (Translation initiation factor IF-2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIM9_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.340e-49 Identity = 170/555 (30.63%), Postives = 244/555 (43.96%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEG-VSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFVDHRRLERDFPHLLEEEVDVAPVADERHGAADEEMDENSICSAQNTVNDVESSRAGTKTPKLPMGQFRGDSDLAQEDMPVT------IVVKADSANTLASILDAFD 1645
R+LA L++ E+ K+ RK + + GV Y F L II+PF+ +A + N L + VE P+ ++ K R PV+A++GH NHGKTT++D L G + +A+ E GITQ+I AT N P ATFLDTPG F RMR N A VAD +VLVV+A +G LQT ESIGC E+LG+P VV +NK+D K L + KEVR +VALEH+ V+PISA+ G LD+L+ +++ L D+D+ A+ +G D A T L+ V S G ++ V++ G+L P D F+ G G V+ + + G V P+ A PG V + DAPL F V+++ AE++ V+ R ++ DF ++S T+TP + D+ +E +P IVVKAD+A +L SILD D
Sbjct: 35 RDLAKKLKVPVDEVAKAACRKHYRKYY-MTHNGVEYKFETLKQIILPFDAAARIAAQHNALVVYDKVE--PD------AVGKHDIPHDKRDMCQTRPPVIAVMGHVNHGKTTLMDTLRG--TNVADYEVEGITQKIHV------------------CATDLNFETP-----ATFLDTPGHFHFTRMRNNAAAVADVVVLVVAADEGCLLQTEESIGCIEDLGVPTVVCINKMD----KATPATLEAVEKEVRGYVALEHSPVLPISAKHGTNLDELKDKILAIL------------------------------PDIDLTAYYGTKGGD-------------AQGTALEIVASIGMGTVIRVMIFHGLLHPKDHFICGMIHGVVKTIRNANGDVVPV--ASPGQVVDVTFKNISRHKDAPLEFGFHVVSQTRAEEI-------------VEQREMDMDF----------------------------------------QASAVPTETP---------EDDVDEEPLPTKGFFGAPIVVKADTAGSLTSILDTVD 444
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: K3WZG4_GLOUD (Tr-type G domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZG4_GLOUD) HSP 1 Score: 190 bits (482), Expect = 2.860e-48 Identity = 143/444 (32.21%), Postives = 217/444 (48.87%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGA--LERRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEGVSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLA 1327
R+LA L++ ++ K + RK+H + G + F + +IVPFE Q +A + + DVE P+ T L + + +DGG+ ++R PV+A++GH +HGKTT+LD L +S IA+ EA ITQ+I L L ATFLDTPG F+RMRTN A VAD I+L+V+A +GV LQT ESIG E+ G+PV+ +NK+D+ E++ ++ +++R FVAL++ +V ISA T LD L++ +V + P + + ++ APE A VL+ V G +L VL+ GVL+ D FV+G G +R L + +G + +A PG+ V+ A ++ DAP F L E A++V R LA
Sbjct: 86 RDLAKTLKLPVDDVLKKVATRAHRKLH-MRWGDNRFEFKNVKQVIVPFEMAQQVAAQFKLQVAYDDVE--PQFTTLA-------SLKKRDGGSNLMQRNPVIAVMGHVDHGKTTLLDTL--HNSNIAKYEAHSITQKINVSETKLSPDLD-----------------------ATFLDTPGHFHFFRMRTNAAQVADVILLIVAADEGVLLQTEESIGAIEDTGIPVIACINKVDIA----TPEQIESVKQDLRSFVALQNCPIVEISATTAQNLDALKAKIVELVSE--------PEVQR--------------------------------KRSVLVAPETFAEGVVLESVAMKGRGTVLRVLLRNGVLKKQDHFVAGMIHGAIRSLRNADG-HEIAHAVPGMVVDVIYANKSKNVDAPNEFGFFALPEARAKQVMEQRQLA 449
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A067CJE0_SAPPC (Tr-type G domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJE0_SAPPC) HSP 1 Score: 185 bits (470), Expect = 3.830e-47 Identity = 144/440 (32.73%), Postives = 209/440 (47.50%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEG-VSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVR 1318
R+LA L++ ++ K L + + + V Y F L +I+PFE +A N L + VE PE ++ K R PV+A++GH NHGKTT++D L G + +A+RE GITQ+I + L F ATFLDTPG F RMR N A+VAD +VLVV+A +G LQT ESIGC E+LG+P +V +NK+D K + L + KEVR +VALE + VVPISA+ G LD+L+ +++ L +VD+ A+ +G D AT T L+ V S G ++ V++ G+L P D F+ G G V+ + + G V P+ A PG V + DAPL F V++++ AE++ R
Sbjct: 35 RDLAKKLKVPADDVAK-LACKKHYHKYYLTHNNVEYKFETLKQVILPFEVAAKIAAHHNALVVYDSVE--PE------AVGKHDIPHEKRDMCQTRPPVIAVMGHVNHGKTTLMDTLRG--TNVADREVEGITQKIHVCLTDLN-----------------------FETPATFLDTPGHFHFTRMRNNAASVADVVVLVVAADEGCLLQTEESIGCIEDLGVPSIVCINKMD----KATPDALDAVEKEVRSYVALETSPVVPISAKLGTNLDELKEKILAIL------------------------------PNVDLTAYYGTKGGD-------------ATGTALEVVASIGMGTVIRVMIFHGLLHPKDHFICGMIHGVVKTIRNANGDVVPV--ASPGHVVDVTFKNVSRHRDAPLEFGFHVVSKDRAEEIMAQR 391
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A6G0WUS0_9STRA (Tr-type G domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUS0_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.040e-45 Identity = 148/454 (32.60%), Postives = 204/454 (44.93%), Query Frame = 2
Query: 287 RRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEGVSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFVDHRRLERDFPHLLEEEVDVAPVADERHGAADEEMDENSICSAQNTVNDVESSRAGTKTPKLPMGQFRGDSDLAQEDMPVTIVVKADSANTLASILDAFDD 1648
R PV+A++GH +HGKTT++D+L G D IA+ E GITQ+I +T L PG P ATFLDTPG F RMR N A VAD +VLVV+A +G LQT ESIGC EELG+P VV +NK+DL+ ++ L ++++VREFVA++ + VVPISA+T LD L+ L+ L DV + A+ +G G T L+ V S G +L +LV GV+RPGD F+ G G V+ + G + A PG V + DAPL F VL +E E +++ R + DF ++ AD D+ +LP+ F+G IVVKAD+A +L S+LD D+
Sbjct: 115 RPPVIAVMGHVDHGKTTLMDSLRGTD--IAKHEVEGITQKIHV----CDTEL-----------------APGVP--ATFLDTPGHFHFTRMRNNAAGVADVVVLVVAADEGCQLQTEESIGCIEELGVPSVVCINKMDLV--SSSKLALERVTEQVREFVAMDTSPVVPISAKTSLNLDTLKETLLEVL------------------------------QDVRLEAYHGDDGGQG---------------TALEVVASTGLGTVLRILVLNGVVRPGDHFICGMIHGAVKTIRRANGDVVVDGATPGHVVDVTFKNLSRHKDAPLEFGFHVLDKERCEA-------------YIEQREMANDFAASVD--------------PADMPQDDQE---------------------ELPLKGFQG----------TPIVVKADTAGSLTSLLDTIDE 438
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A1W0AAC6_9STRA (Translation initiation factor IF-2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAC6_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.730e-44 Identity = 164/560 (29.29%), Postives = 243/560 (43.39%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEG-VSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFVDHRRLERDFPHLLEEEVDVAPVADERHGAADEEMDENSICSAQNTVNDVESSRAGTKTPKLPMGQFRGDSDLAQEDMPVTIVVKADSANTLASILDAFDDWSEIKISENG 1678
R+LA L++ E+ K K + + V Y F L +I+PF+ +A + L + VE PE ++D G + R PV+A++GH NHGKTT++D L G + +A+ E GITQ+I +T N P ATFLDTPG F RMR N A+VAD +VLVV+A +G LQT ESIGC E LG+P +V +NKID + E+ + KE++ +VAL+ + ++PISA G LDKL+ ++ L + V++ A+ +G D A T L+ V S G ++ V++ G+L P D F+ G G V+ + + +G V P+ A PG V + DAPL F V+T+ AE++ ++ R L DF + + P D+ +V D + LP F G IV+KAD+A +L SILD D+ I + G
Sbjct: 31 RDLAKKLKVTSDEVVKQTCTKHYHK-YSMTHNNVEYKFETLKQVIIPFDLASKVAAKYGALVVYDSVE--PE------NVDKHQLPPGTNEMCQIRPPVIAVMGHVNHGKTTLMDTLRG--TNVADYEVEGITQKIHV------------------CSTDLNFETP-----ATFLDTPGHFHFTRMRNNAASVADLVVLVVAADEGCLLQTEESIGCIENLGVPSIVCINKIDKVQPSAIEK----VEKEIQSYVALKKSPILPISAANGTNLDKLKENILEILPQ------------------------------VNLMAYYGTKGGD-------------AQGTALEIVASIGMGTVIRVMIFHGLLHPKDHFICGMIHGVVKTIRNSKGQVVPV--ASPGQVVDVTFKNVSRHRDAPLEFGFHVVTQARAEEI-------------IEQRELNVDF------QASIIPSDDD-------------------SVEDNQE--------PLPAKGFFG----------APIVIKADTAGSLTSILDTVDEMPFIHTAHIG 451
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: A0A485L937_9STRA (Aste57867_16653 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L937_9STRA) HSP 1 Score: 176 bits (445), Expect = 8.710e-44 Identity = 167/559 (29.87%), Postives = 240/559 (42.93%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRPVVALLGHFNHGKTTILDALLGPDSGIAEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSALVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEGVSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFVDHRRLERDFPHLLEEEVDVAPVADERHGAADEEMDENSICSAQNTVNDVESSRAGTKTPKLPMGQFRGDSDLAQEDMPVTIVVKADSANTLASILDAFDDWSEIKISENG 1678
R+LA L++ ++ K K + + GV Y F L +I+P + +A R+ TH+ V+ SI+ + R PV+A++GH +HGKTT++D+L G + +A+ E GITQ+I +T+L P P TFLDTPG F RMR N A VAD +VLVV+A +G LQT ESIGC E LG+P VV +NK+D+ P E L+ +V+E+VA+EH+ +V ISA+ G LD+L++ L+ L DVP +Q A T L+ V S TG +L VL+ G+++ GD FV G G ++ + GV + A PG V + DAPL F V+++E AE + ++ R + DF A V + AA E D LP F G IVVKAD+A +L S+LD DD I ++ G
Sbjct: 40 RDLAKKLKVHVDDVVKHACKKHYHKYY-MTHAGVDYKFDNLKQVILPVD----MAARI--ATHYA-------APVVYDSIEPPAFDDAQQ--QQVRPPVIAVMGHVDHGKTTLMDSLRGTE--VAKHEVEGITQKIHV----CDTTL-----------------APDMP--VTFLDTPGHFHFTRMRNNAAGVADVVVLVVAADEGCRLQTEESIGCIESLGVPSVVCINKMDIAPPGALER----LTADVKEYVAVEHSPIVAISAKDGTNLDRLKATLLEVLR--------------------------------DVP------------LQACVGTGGNAQGTTLEVVASTGTGTVLRVLIVHGIVQKGDHFVCGMIHGMIKTIRRATGVV-VDAATPGQVVDVTYKKLSRHKDAPLEFDFHVVSKERAEHI-------------LEQREMANDF---------AASVQVDDEAAAQEAAD-------------------------LPAKGFVG----------TPIVVKADTAGSLTSLLDTIDDMPGIHVAHFG 451
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Match: H3GSC9_PHYRM (Tr-type G domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC9_PHYRM) HSP 1 Score: 175 bits (444), Expect = 7.030e-42 Identity = 182/620 (29.35%), Postives = 268/620 (43.23%), Query Frame = 2
Query: 2 RELATLLRMKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLNKLTHFLDVEKKPERTVLGLSIDSGGTSQGKDGGALERRPVVALLGHFNHGKTTILDALLGP-DSGI---AEREAGGITQEIRARIVPLETSLTSLRNWTKTSATKNNIAVPGFPKVATFLDTPGQEIFYRMRTNGATVADAIVLVVSAVDGVCLQTSESIGCAEELGLPVVVVLNKIDLLPKKDAEERLANLSKEVREFVALEHAQVVPISARTGDGLDKLRSA---LVSALGRKTRPSEDRPSIGNTDAENEEREQPEERPVDVDVPAFESGEGADGPRIQIMEAPEDAATATVLDYVRSAKTGKMLLVLVDRGVLRPGDFFVSGTSWGWVRLLFDEEGVSPLQYAGPGVAAKVVVATRTSMHDAPLGEPFRVLTEEAAEKVALVRMLARKIGNFV------DHRRLERDFPHL--LEEEVDVAPVADERHGAADEE----MDEN----------------SICSAQNTVNDVESSRAGTKTPKLPMGQFRG-DSDLA-------------QEDMPVTIVVKADSANTLASILDAFDDWSEIKISENGGDEALPEVVAAD 1714
R+LA LR ++ K + RK P F + +I++PF Q +A + + DVE PE + + D R+PVVA++GH +HGKTT++D L ++G+ A E GITQ+I L L ATFLDTPG F+RMR++ A VADA++L+V+A +GV LQT ESIG EE GLP V+ +NK+DLL + +E+ + ++ E+R FVAL+ + V+ IS +TG GLD LR LV+ L AD ++ + PE A VL+ V G +L VL+ +G L P FV+G G VR + D EG ++ A PG V + ++ DAP F VL E A++V R LA + + + H E ++ LE D V +E + DEE +DEN S+ S Q+TV+++ +G T +L +G D D+A + + + D +T+ + D DD S + E GD A P D
Sbjct: 86 RDLAKALRQPVDKVLKLVVTKNNRKFQLKAKNHPPAEFRSVKHIVLPFRVAQDVAEQFGMQVAYDDVE--PELSDASVGFDERFLGV--------RQPVVAVMGHVDHGKTTLMDTLREQMNTGLKQLAPYEKNGITQKINVCEAALTPDLK-----------------------ATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAVICINKVDLLGEAGSEQ-VDSIVDELRSFVALQDSPVLTISGKTGAGLDDLRHTVRELVTGL-------------------------------------------ADDHKLDALVGPEPHAEGLVLESVALKGRGTVLRVLIKQGELSPKQHFVAGMIHGVVRGMSDAEG-REVKCALPGTVVDVTYSNKSKNVDAPNEHGFFVLPEARAKQVIEQRELALEFNDCLLPDESGAHTGTEAEYTTTDSLEGGQDARNV-EESNNELDEEDDGVIDENDLIETKSIVVKADGAGSLTSIQDTVDEM----SGISTVRLGIGNISAKDIDVAINGKCPIFGFNVKLRNREAKLAAERDRRSTMMAFGDDPDDMSARLLGE--GDAAAPAAPFTD 620 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20187.5709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20187.5709.1 >prot_H-elongata_contig20187.5709.1 ID=prot_H-elongata_contig20187.5709.1|Name=mRNA_H-elongata_contig20187.5709.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=697bp MKPKEIFKSLGGYQERKMHRVVLGGVPYAFPKLGNIIVPFEDVQVLARRLback to top mRNA from alignment at H-elongata_contig20187:1935..6949+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20187.5709.1 ID=mRNA_H-elongata_contig20187.5709.1|Name=mRNA_H-elongata_contig20187.5709.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5015bp|location=Sequence derived from alignment at H-elongata_contig20187:1935..6949+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20187:1935..6949+ >mRNA_H-elongata_contig20187.5709.1 ID=mRNA_H-elongata_contig20187.5709.1|Name=mRNA_H-elongata_contig20187.5709.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4182bp|location=Sequence derived from alignment at H-elongata_contig20187:1935..6949+ (Himanthalia elongata Himel1 dioecious)back to top |