mRNA_H-elongata_contig20154.5686.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20154.5686.1
Unique NamemRNA_H-elongata_contig20154.5686.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Match: D7FVT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT4_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 4.220e-141
Identity = 320/671 (47.69%), Postives = 377/671 (56.18%), Query Frame = 2 
Query:   32 GKMWPQARSSRPSSNQIGGDGLL-LQHQEQAAFDGWSAHVRYFLARYPFETRQFVAQRLATYGIWRLLASHHQEDLTLDILASATDSADKDVMSIMREHARGRRKXXXXXXXXXX--------EVRQAP-ASVDAGPAPRAALQERGRAE-NV----PDRAGMPSYRRKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKREIRRRWMRTRLAHETFSELKASALGIRLSDLPTALQYLFFSDSASLLPTKGTGPQVAGDSG--GKPPARSAKDVHLVMALARESLSPTLALAARDTSTLSSASTHEGPETG-WARDGQNMFISERRWMKLVAHVVRRLWEIDGTPRSGDA-----------------------SIRPPRIAVADPLSATAVTKFQPPLWQPTGG--GVVTGRSPARLPG--------RDGDEENVQEAFSRSA---VPFRPDST-WGS-AAASGVRTDDHGAVP------------ASRASRVWNKMQGESECWAGAGRSLTWAPDISVGAQLFDESGTKEVDVREVCGRGGDHDSGRR--------DSVAIANARKSAVRDTVARRRLESLD-----GAAGHGVADDVESGADRDGRMSSAPPLLSLASFNAPLRGHTPGEHALDIANAFLESSLMTRLAGGDW 1801
            G++ P+ R++  +   + G G   + H      DGWSAHVRYFLARYP ETR  VAQRLA+YGI  LL+SH QE+L+LD L +ATD+AD++V+S MREHARGR K                  + RQ P A+     AP   L+ER  A+ N+    P  AG  +  RKRH V  RPDVLTRYPFVDDLA  +GGGVGA + QATPTTP+Q+LAKREIRR      LAHE F ELKASALGIRLSDLP ALQ+LFF DSASLL +KG             +   RSAKDVHLVMALARE L PTLA AARDTSTLS+AST  G E G W RDGQNMF+SERRW+K+VAHV+RRLW++DG P    A                       S +P  +A     +A    +FQ P+W+P GG  G V                  R G+ ENV  A S         R D+T WG  +AAS +   D    P               A R W     E+E W GAGRS+  AP          E+G      R   G G  H S RR        D+  IA AR+SAVRDTVARRRL+ LD     G A  G   D  SG   DG        L+ A +++  RGHTPGEHALDIA AFLESSLMTRLAGGDW
Sbjct:    4 GQLHPKPRAASRNHGYLNGGGFDGIGHGR--GLDGWSAHVRYFLARYPPETRDLVAQRLASYGIRSLLSSHRQENLSLDALLAATDAADREVLSSMREHARGRHKQRGAAAPLCRSRTSSPQRQQRQHPRANGGNAAAPTEVLRERVLADKNIDAGPPGAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRR------LAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGXXXXXXXXXXXXARGAKRSAKDVHLVMALARECLPPTLAHAARDTSTLSTASTQGGAEAGGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPEDVAAXXXXXXXXXXXXXXXXXXXXAGPSRKPATVAAT---AAPFGMEFQQPVWKPVGGRRGSVAXXXXXXXXXXXXXXRFLRGGEAENVTSAESFLGGLEADSRSDTTGWGGFSAASRISASDGDGGPYPGEGXXXXXXXXXEALRAWE----EAEDWVGAGRSIARAPGEEQEEHARGEAGGLFAAPR---GLGAVHGSRRRRKQSGGAGDAGRIAGARRSAVRDTVARRRLDRLDRGSSLGDATQGFPADGRSGVSGDGDRDRGGSSLA-AEWDSNARGHTPGEHALDIAGAFLESSLMTRLAGGDW 655
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BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Match: A0A6H5JP21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP21_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 6.700e-133
Identity = 315/721 (43.69%), Postives = 382/721 (52.98%), Query Frame = 2 
Query:   32 GKMWPQARSSRPSSNQIGGDGLL-LQHQEQAAFDGWSAHVRYFLARYPFETRQFVAQRLATYGIWRLLASHHQEDLTLDILASATDSADKDVMSIMREHARGRRKXXXXXXXXXXEV-----RQAPASVDAG---PAPRAALQERGRAE-----NVPDRAGMPSYRRKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKREIRRRWMRTRLAHETFSELKASALGIRLSDLPTALQYLFFSDSASLLPTKGTGPQVAGDSGGKPPA-RSAKDVHLVMALARESLSPTLALAARDTSTLSSASTHEGPETGWARDGQNMFISERRWMKLVAHVVRRLWEIDGTPRS-------------------GDASIRPPRIAVADPLSATAV-TKFQPPLWQPTGGG--VVTGRSPARLPGRDGDEENVQE---AFSRSAVPFRPDSTWGSAAASGVRTDDHGAVPASRASRVWNKMQGESECWAGAGRSLTWAP-------------DISVGAQLFD-----------------------------------ESGTKEVDVREVC-----------GRGGDHDSGRRDSVA-----------------------IANARKSAVRDTVARRRLESLDGAAGHGVADDVESGADRDGRMSSAPPL--------LSLAS-FNAPLRGHTPGEHALDIANAFLESSLMTRLAGGDW 1801
            G++ P+ R++  +     G G   + H      DGWSAHVRYFLARYP ETR  VAQRLA+YGI  LL+SH QE+L+L+ L +ATD+AD++V+S MREHARGR+K           +     +Q   S D G    AP   L+ER  A+     + P  AG  +  RKRH V  RPDVLTRYPFVDDLA  +GGGVGA + QATPTTP+Q+LAKREIRR      LAHE F ELKASALGIRLSDLP ALQ+LFF DSASLL +KG G +          A RSAKDVHLVMALARE L PTLA AARDTSTLS+AST  G E GW RDGQNMF+SERRW+K+VAHV+RRLW++DG P                       A+  P R   A P +A     +FQ P+W+  GGG  +   R+ + + G + D  +       FS ++     D   G     GV  DD  A+      R W     E+E W GAGRS+  AP             D+   A+                                      + GT+   + EV            GRG      RR+S                         IA AR+SAVRDTVARRRL+ LD     G   DV  G   DGR   +            SLA+ +++  RGHTPGEHALDIA AFLESSLMTRLAGGDW
Sbjct:   14 GQLHPKPRAASRNHGYHNGGGFDGVGHGR--GLDGWSAHVRYFLARYPPETRDVVAQRLASYGIRSLLSSHRQENLSLEALLAATDAADREVLSSMREHARGRQKQRGAAALSRSRMSSAQRQQRQHSRDNGGNGAAPTEVLRERVLADKNIDASPPAAAGAVTVFRKRHVVAARPDVLTRYPFVDDLAATQGGGVGAVMHQATPTTPIQYLAKREIRR------LAHEAFRELKASALGIRLSDLPCALQFLFFGDSASLLTSKGGGSRXXXXXXXXXGANRSAKDVHLVMALARECLPPTLAHAARDTSTLSTASTQGGSEAGWMRDGQNMFVSERRWIKVVAHVIRRLWDMDGRPEDVAAXXXXXXXXXXXXXXXXXXAAAGPSRKPAAVPATAAPFGMEFQQPVWKRGGGGRYLRVTRADSFVGGLEEDSRSDTTRWGGFSETSRISASDGDGGPYPGEGVGGDDDEAL------RAWE----EAEDWVGAGRSIARAPGEEQEDYAQEEAGDLFAAARGLGAVHGSSRRRTQSAGAGGAGXXXXXXXXXXXSGADWKEGTRPAGMWEVSPPAHVVASSRTGRGRRGQGARRESGPAYLRGVQSRIRPQLDAHKDRLRKIAGARRSAVRDTVARRRLDRLDRGGNPG---DVTQGFPADGRSGVSGDRDKDRDRGGYSLATEWDSNARGHTPGEHALDIAGAFLESSLMTRLAGGDW 713
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BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Match: A0A835Z222_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z222_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.180e-22
Identity = 103/328 (31.40%), Postives = 151/328 (46.04%), Query Frame = 2 
Query:  146 VRYFLARYPFETRQFVAQRLATYGIWRLLASHHQEDL--TLDILASATDSADKDVMSIMREHA-RGRRKXXXXXXXXXXEVRQAPASVDAGPA-PRAALQERGRAENVPDRAGMPSYRRKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKREIRRRWMRTRLAHETFSELKASALGIRLSD----LPTALQYLFFSDSASLLPTKGTGPQVAGDSGGKPPARSAKDVHLVMALARESLSPTLALAARDTSTLSSASTHEGPET---GWARDG--------------QNMFISERRWMKLVAHVVRRLWEIDG 1054
            +R+ LA++P E +  + + LA +G+  LL +H  +DL      + +AT++A ++V +I+REH+ RG R             R+  ++    P  PR+ ++   R    PD              + RPDVL +YPFVD       G VG  L     TTP   LAKREIRR      LA   F E ++SA GIRL       PT +  LF +   +  P             G+    +   +HL++ALA+E+L  +L L  RDTS L   ST     T   G   D                +  + +  W +LVAHVVRRLW+++G
Sbjct:   12 LRHVLAKFPREQKTVIEECLAWHGLRVLLQAHRLDDLLGNASAVLAATEAARREVHAILREHSTRGPRPTARTKAATAVAKRRTRSASPTTPRLPRSPVKGTLRGSRQPD--------------IPRPDVLAKYPFVDGQ-----GNVGEILACPPRTTPFHRLAKREIRR------LAKAAFMEYRSSAHGIRLHAPPQIAPTGITPLFDARCRTSTPRLRDFKSALSALFGEATYSACGGMHLILALAQEALPHSLQLVLRDTSDLGDVSTAPSVATFGMGLTEDNIEVPGNTHPVKVPRNDAAVDQSEWTRLVAHVVRRLWQMEG 314
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20154.5686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVT4_ECTSI4.220e-14147.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP21_9PHAE6.700e-13343.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z222_9STRA2.180e-2231.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20154contigH-elongata_contig20154:1353..6812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-01_002060.1
Exons10
Model size1804
Cds size1767
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930133.5962849-UTR-H-elongata_contig20154:1352..13891622930133.5962849-UTR-H-elongata_contig20154:1352..1389Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20154 1353..1389 +
1691679293.6630883-UTR-H-elongata_contig20154:1352..13891691679293.6630883-UTR-H-elongata_contig20154:1352..1389Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20154 1353..1389 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930133.6163309-CDS-H-elongata_contig20154:1389..15511622930133.6163309-CDS-H-elongata_contig20154:1389..1551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 1390..1551 +
1691679293.6729002-CDS-H-elongata_contig20154:1389..15511691679293.6729002-CDS-H-elongata_contig20154:1389..1551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 1390..1551 +
1622930133.6321478-CDS-H-elongata_contig20154:2194..22791622930133.6321478-CDS-H-elongata_contig20154:2194..2279Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 2195..2279 +
1691679293.6825464-CDS-H-elongata_contig20154:2194..22791691679293.6825464-CDS-H-elongata_contig20154:2194..2279Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 2195..2279 +
1622930133.6482625-CDS-H-elongata_contig20154:2725..28891622930133.6482625-CDS-H-elongata_contig20154:2725..2889Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 2726..2889 +
1691679293.6919513-CDS-H-elongata_contig20154:2725..28891691679293.6919513-CDS-H-elongata_contig20154:2725..2889Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 2726..2889 +
1622930133.667326-CDS-H-elongata_contig20154:3360..35581622930133.667326-CDS-H-elongata_contig20154:3360..3558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 3361..3558 +
1691679293.7078989-CDS-H-elongata_contig20154:3360..35581691679293.7078989-CDS-H-elongata_contig20154:3360..3558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 3361..3558 +
1622930133.6857667-CDS-H-elongata_contig20154:3783..37971622930133.6857667-CDS-H-elongata_contig20154:3783..3797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 3784..3797 +
1691679293.7181156-CDS-H-elongata_contig20154:3783..37971691679293.7181156-CDS-H-elongata_contig20154:3783..3797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 3784..3797 +
1622930133.7072136-CDS-H-elongata_contig20154:3899..41001622930133.7072136-CDS-H-elongata_contig20154:3899..4100Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 3900..4100 +
1691679293.72881-CDS-H-elongata_contig20154:3899..41001691679293.72881-CDS-H-elongata_contig20154:3899..4100Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 3900..4100 +
1622930133.733817-CDS-H-elongata_contig20154:4599..47171622930133.733817-CDS-H-elongata_contig20154:4599..4717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 4600..4717 +
1691679293.738688-CDS-H-elongata_contig20154:4599..47171691679293.738688-CDS-H-elongata_contig20154:4599..4717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 4600..4717 +
1622930133.7504685-CDS-H-elongata_contig20154:5222..57771622930133.7504685-CDS-H-elongata_contig20154:5222..5777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 5223..5777 +
1691679293.748877-CDS-H-elongata_contig20154:5222..57771691679293.748877-CDS-H-elongata_contig20154:5222..5777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 5223..5777 +
1622930133.7718554-CDS-H-elongata_contig20154:6323..64481622930133.7718554-CDS-H-elongata_contig20154:6323..6448Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 6324..6448 +
1691679293.759922-CDS-H-elongata_contig20154:6323..64481691679293.759922-CDS-H-elongata_contig20154:6323..6448Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 6324..6448 +
1622930133.787787-CDS-H-elongata_contig20154:6667..68121622930133.787787-CDS-H-elongata_contig20154:6667..6812Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 6668..6812 +
1691679293.7700775-CDS-H-elongata_contig20154:6667..68121691679293.7700775-CDS-H-elongata_contig20154:6667..6812Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20154 6668..6812 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20154.5686.1prot_H-elongata_contig20154.5686.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20154 1390..6812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20154.5686.1

>prot_H-elongata_contig20154.5686.1 ID=prot_H-elongata_contig20154.5686.1|Name=mRNA_H-elongata_contig20154.5686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=589bp
MWPQARSSRPSSNQIGGDGLLLQHQEQAAFDGWSAHVRYFLARYPFETRQ
FVAQRLATYGIWRLLASHHQEDLTLDILASATDSADKDVMSIMREHARGR
RKKSSHAPPPPPEVRQAPASVDAGPAPRAALQERGRAENVPDRAGMPSYR
RKRHAVVGRPDVLTRYPFVDDLAGERGGGVGAALKQATPTTPVQHLAKRE
IRRRWMRTRLAHETFSELKASALGIRLSDLPTALQYLFFSDSASLLPTKG
TGPQVAGDSGGKPPARSAKDVHLVMALARESLSPTLALAARDTSTLSSAS
THEGPETGWARDGQNMFISERRWMKLVAHVVRRLWEIDGTPRSGDASIRP
PRIAVADPLSATAVTKFQPPLWQPTGGGVVTGRSPARLPGRDGDEENVQE
AFSRSAVPFRPDSTWGSAAASGVRTDDHGAVPASRASRVWNKMQGESECW
AGAGRSLTWAPDISVGAQLFDESGTKEVDVREVCGRGGDHDSGRRDSVAI
ANARKSAVRDTVARRRLESLDGAAGHGVADDVESGADRDGRMSSAPPLLS
LASFNAPLRGHTPGEHALDIANAFLESSLMTRLAGGDW*
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mRNA from alignment at H-elongata_contig20154:1353..6812+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20154.5686.1 ID=mRNA_H-elongata_contig20154.5686.1|Name=mRNA_H-elongata_contig20154.5686.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5460bp|location=Sequence derived from alignment at H-elongata_contig20154:1353..6812+ (Himanthalia elongata Himel1 dioecious)
GTGATATTGAAAGTACAAGAATCAGGTAGCAGGCAAAATGTGGCCACAAG
CTAGGTCAAGCCGTCCGAGCTCTAACCAAATTGGTGGAGATGGACTGTTA
TTGCAACATCAAGAGCAGGCGGCATTCGACGGTTGGAGCGCTCACGTTCG
ATATTTTTTGGCCCGGTATCCGTTCGAAACGCGCCAATTCGTTGCCCAGG
TGTGATCTGATCGAGACTGAATAGGTTGATTCTGTCCCCACGGAACATGT
GGTATATCTTGCCTGCTTTAGACACGAAACTTCCGAGTGCTCGGTAGGGC
ATTTTCGAGTTATCTCCTCTTGTGCCTTTTTCGCCCCGGTGGAGATATTA
CGTTTGATTCATTCAACTGTGAGATTTTAAGTCAATTCAAAATTCAACTC
AACAGTGGATTATTCACCAATTTTTGAACCTTCATGACACACCAAGCCGG
AGCATCCTTCCGTACAAGTACCGGCCATAGCGAAATGGCTTCGGAGAGAG
ATTGAAAGAGATTTGGATTATCTTCCGTAAACTGAATGCTCACGGGGTTG
AAGATGCGATCGGCATCGACTACTCTTGGACGGTCGCTCAGTGATTTTAT
TGACAAGCTACACATCACTACAGTCAGCTCTCCTTTATGTACTTGTAGTC
ACTACTTATTTGACGGTTGGACACTAGTAATAATACCGGGTACCCTGCTT
ATCCCTATTGCTCCTGCTCATCCCTTGTTGTTACCTTTGTTGGACACTAG
TAATAATACCGGGTACAGTAATACCTACCGTACTTCAGTTGTCATTTAAC
TGCAGTAACTGTATCACTTCCATCGCCAATATTCCCCCGCAGCGATTGGC
CACATACGGCATTTGGAGGCTGCTGGCATCCCACCATCAGGAAGACCTCA
CCCTCGACATTTTGGCCTCCGCCACAGGTACATCTCTTCCCAGGTTACCG
AATAAAAGTGTTGTCCAACTGTAAGATATCGGGAGCCGAGCTCAATAAAT
ACTCAAGAGCGTTTTACCCTCCTGTTATGCTTACGTGTAGTCCCGAGACT
GTAGCTCTCTATACGGCTGCTGGCACCTTCCTGGCGGCTTGGACCATACA
ATTTGTTACCATTTGTGAACGTTTCAAGTTTACGAGTACGTTCGTACTCT
CGGGCCGTGACTCGCTGCATAGGTTTTGCTTCTGAGACCGCCAAGAAGCC
TCCGGGCAGATGCGGGATGCCGCTATGAAGTAGCAGAGGCTTCATATCAG
GTCGCGTGGGGCTTTACTGTTCCTACATACATTCGATATACATTCGATAT
ACATCCACACAGCCGATATTCGTTTACCCCACTCCTAAATCTCTCTCGTA
TGGCGCACCGCGCGTTTGCATAGATTCAGCAGACAAAGACGTTATGTCGA
TCATGAGGGAACACGCCAGGGGTCGGCGAAAAAAATCTTCCCACGCCCCT
CCGCCACCTCCCGAGGTTCGCCAGGCTCCTGCAAGCGTCGACGCAGGGCC
CGCGCCACGCGCTGCACTGCAAGAGCGTGGTCGAGCGGTTAGTAACGGAT
TAATTTGAAGCTATCATTCAGGCCTCCGTCGTTCGGTGCTAGGGATAGGG
GGCGGGGCGGGGTCGTCGACCGGGCTTCCTCATGGCTTTGATAAGGAACG
GGAAAGGGAGGGAAGATTTGCCGAGTCCTGCGCAGTCTCCGAATGCGTGG
TCAAGATGATTCGATATTTGGTGGAGGTCATGTGTGGAGCTGGGTTAGCT
TTGATAACGTCCAGCTCTTTCCCGCCACCTCTTCTAAAGCCTGCGATAAC
TTTAAAATGCACTTTAAGGCGTACGCGTCTGTTGTTTCCTTCATCTGTGG
GCTAAGGGAATCGTTCATAGCCTAGGTAAGCCTAGGTGAGCGGCACTGCG
TGTTGCCACGAATGGGGCACACCCAAGCTGATTAACGGTCTGTTAGACAA
AGCACTTTCATGGAAACATTACGGTTCGCCATTTGTACTGTATAATCTCG
TGCCTCAGGAAAACGTACCCGACCGGGCAGGAATGCCGTCTTACCGTAGG
AAGCGCCACGCGGTAGTCGGCCGTCCCGATGTGCTCACACGGTACCCGTT
TGTGGACGATCTCGCGGGCGAACGGGGGGGCGGAGTCGGTGCGGCCCTCA
AACAGGCGACGCCCACTACTCCCGTGCAGCACCTCGCCAAGCGCGAGATC
AGGCGAGTGCCACCCGAATTCTACCTTTCCCTTTCAGAGAGCCACTACCG
TACCGCACACGACGAGGGGGGCAGTCATAACGCCGTCGACGCTGCGTAGC
CCGGTGTCGGACTCTTCGGGGGGATGAAACGCCGCAGGATGAGGGATTTT
GTTTTACGGATGTTGCCGGCGTACACTAAGGGCGCTGCTGTAGAGAGTAA
CTGCTATAATATGTAGGTACACGACAGTAAGCGGTGGATGAGAACGTACG
GCACAGGTAGTTTACTATTGTCATGGATATCAAACTTTTGGTTTCTCCGT
GCTTTCGCTTGTTCGCTCGTTTGTTTGTGTTTGTTTGCTCGCGTAAGACG
GCTGGCCCACGAGACGTTCTCCGAGCTGAAGGCGTCGGCGCTGGGCATTC
GCTTGTCAGATCTGCCCACAGCCCTGCAGTATCTGTTTTTCAGTGACTCG
GCGTCTCTCTTGCCGACGAAGGGGACGGGGCCACAAGTAGCGGGCGATAG
CGGAGGGAAACCGCCAGCTAGGTCAGCAAAGGACGTGCATCTTGTCATGT
GAGGAGGGCAGACCACGTGTGGGAAGAGACGAGGAAAATAGGAAGAAGAG
TGACGGGTTCGCGATACTTCCTCGTTTTGTAAGCCTCGGTGAAAAAATCC
TCGATCTTTCTACGGAGAAGTCAGATAGTTTTACTTACCCACCGGGGAAG
ACGCCGAGGGGATGCCAAGGGGAAGGACGCCACGGCGTGTAACGTTCGTT
TTTTTGTCGCCCCCCCCCCCAAAGGAACATTCGTCTTCACCGTTTTGTTG
TGCGGAGGAATGCGGAGCAAGGTGATTACTCTTCTCCCCTGACGTCTCAA
GCGAAATACATGCTACTCTTCCCGTCCGCCGTAACGTACGCGCGAAGTCC
TTCTCTTCCTTATCCGGTCCAGTTCGCGTTTTGGTCGCCGATCCCACGCC
ATGCCTTCTCGATGACTTTGTCGCTTAGAGGCCACTGTGCTGCAATGTAT
CCCAATAGAAAAGCCTACCTACCCAAATCGAAATCGTTCTGTCACAGGGC
ACTCGCTCGAGAGTCTCTCTCGCCCACGTTGGCCCTGGCTGCTCGTGACA
CGAGCACGCTCAGCAGCGCCAGTACACACGAGGGCCCGGAGACAGGATGG
GCTCGTGACGGACAGGTGCCCGTCTAGGATTGACACCTTCCCGCATCTGG
TACTATCTGAGCGTGTAGAGCGAATTATGTCCTTGCCGTGATTTGACCCA
GAGCCGGGTTATAAGTTCGCTTGGTGTAATGCTTGTGCCGTAGTTTGGCA
CAACGTCCCCCACCCCGTATAAAACCTCGTTGAAGCGAGATCTGATTCGA
CTCTGATGTTTTAACACTCCCAAAACATTCCTTGAGTACACCAGGCAAGA
AAAAAGCACGACGAAAACAAACTGCTCCAGTTGAAATATTATTCAGCGTT
GAGACCGACCCATGTTTAGCGTTTAGCACCGCCGGCGGACACAGACACTA
TCGCGGATGTAACACACTGCAAATTAAATGGAAGCGAAGGCGCTTTTGGT
GTGTTCACCTACCAAGGCTTCAGCGTACGGTACATGCATCTTCCTCGCCG
GAGGACACATTAGAGCACACCTCCTAACTTGATCATTCAAATGCTGCTTG
TATGTGCCCGACACATCCAGAACATGTTCATCAGCGAGCGTCGATGGATG
AAGTTGGTGGCCCACGTGGTCCGCCGCCTCTGGGAAATAGATGGAACCCC
TCGCAGCGGTGACGCCTCTATCCGCCCCCCACGCATCGCCGTTGCCGACC
CCTTGAGCGCAACCGCCGTCACAAAATTCCAGCCGCCGTTGTGGCAACCA
ACCGGTGGCGGCGTAGTTACCGGGCGATCACCGGCGAGACTGCCCGGACG
AGACGGGGACGAAGAAAATGTTCAAGAGGCGTTCTCGAGGTCCGCCGTTC
CGTTCCGACCGGACAGCACGTGGGGGTCCGCGGCTGCGTCGGGCGTAAGG
ACAGACGACCATGGCGCCGTGCCCGCCTCGCGTGCCTCTCGTGTGTGGAA
CAAAATGCAGGGCGAGTCCGAGTGTTGGGCGGGCGCGGGGCGGTCGTTGA
CGTGGGCGCCCGACATCAGCGTGGGGGCACAGTTGTTCGATGAGTCCGGC
ACTAAGGAGGTGGATGTGCGGGAAGTTTGTGGTCGCGGAGGAGATCACGA
CAGCGGAAGGCGTGACTCCGTCGCGGTGCGCGATATCCGTAGCTACCGGG
GAGGAGGAAGAAGAGGAAGGGACGGAGTTAGACAGAAAGCGGTGGGCCTC
GGCGGGATTGGTGACAAGGAAGGTACTCGACCGGCAGGCATGTGGCAAGT
GACCCCGCAAGCCCATGTGGTGGCCATGAGCCGCGCGAAGCAGACCCGCG
ACGGCAGTCGAAAGAAGGAAGGTCCGGCGTATCTGCGCGGGGTGCGATCG
AAGATAGGAGCACAAGTTGGTGCCCACAGGGAGCGACTCAGAAAGGTGCG
AACGTGCGTGCGAGAAATATGCGTGCTTCTCAATTCCTCGTCGTATGTTG
CTGAGCGACCCGTTTTGCGACTGCTCGAAAACCATATGTTCCAGAATATA
CGACACTGCTGAGCGATAGCAACAAATCTTTCGCCATCAGCCCATATATT
TTTCTTAAGCCCCAGCTCGCCGAGTCTCTTTATGTATAATATATAATACG
TCCATAGACGGAATCCAAGTTGTGCGTTGGTCACTTATTGCCGTCGCCGC
TTGCAACTCTCGCTCGTATAGATCGCAAACGCCCGCAAGTCTGCCGTGAG
GGACACTGTTGCCCGGCGGCGCTTGGAAAGCCTAGACGGCGCAGCTGGCC
ACGGTGTTGCGGATGATGTTGAAAGTGGCGCGGACAGAGATGGGCGGTTG
CCCAACAGGTGCTAGTGCGTGAGCCTTGCGAGATAGGGTGTGTGTGGAGA
GGCACGGCTTGTTGACGTTTGAAGAATCCGTGTGTGTATGAAATATTGTC
GCTGGATCGTGGCCCGCCGCATGAGCAAGTAAAAATAATCGCAACCTAAT
GACCGTCTCAGGGCTTATCGAGTTTGTGGCTTATATATGCAAACATCCGA
CCACATGCCTACTAGCATGTCAAGCGCACCCCCTTTGCTTTCCCTGGCAT
CATTCAACGCGCCTCTCAGGGGTCATACGCCGGGCGAGCATGCTCTGGAC
ATCGCTAATGCATTCCTGGAGTCCTCTTTGATGACTCGCTTGGCCGGGGG
AGACTGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig20154:1353..6812+

>mRNA_H-elongata_contig20154.5686.1 ID=mRNA_H-elongata_contig20154.5686.1|Name=mRNA_H-elongata_contig20154.5686.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3534bp|location=Sequence derived from alignment at H-elongata_contig20154:1353..6812+ (Himanthalia elongata Himel1 dioecious)
ATGTGGCCACAAGCTAGGTCAAGCCGTCCGAGCTCTAACCAAATTGGTGG
AGATGGACTGTTATTGCAACATCAAGAGCAGGCGGCATTCGACGGTTGGA
GCGCTCACGTTCGATATTTTTTGGCCCGGTATCCGTTCGAAACGCGCCAA
TTCGTTGCCCAGATGTGGCCACAAGCTAGGTCAAGCCGTCCGAGCTCTAA
CCAAATTGGTGGAGATGGACTGTTATTGCAACATCAAGAGCAGGCGGCAT
TCGACGGTTGGAGCGCTCACGTTCGATATTTTTTGGCCCGGTATCCGTTC
GAAACGCGCCAATTCGTTGCCCAGCGATTGGCCACATACGGCATTTGGAG
GCTGCTGGCATCCCACCATCAGGAAGACCTCACCCTCGACATTTTGGCCT
CCGCCACAGCGATTGGCCACATACGGCATTTGGAGGCTGCTGGCATCCCA
CCATCAGGAAGACCTCACCCTCGACATTTTGGCCTCCGCCACAGATTCAG
CAGACAAAGACGTTATGTCGATCATGAGGGAACACGCCAGGGGTCGGCGA
AAAAAATCTTCCCACGCCCCTCCGCCACCTCCCGAGGTTCGCCAGGCTCC
TGCAAGCGTCGACGCAGGGCCCGCGCCACGCGCTGCACTGCAAGAGCGTG
GTCGAGCGATTCAGCAGACAAAGACGTTATGTCGATCATGAGGGAACACG
CCAGGGGTCGGCGAAAAAAATCTTCCCACGCCCCTCCGCCACCTCCCGAG
GTTCGCCAGGCTCCTGCAAGCGTCGACGCAGGGCCCGCGCCACGCGCTGC
ACTGCAAGAGCGTGGTCGAGCGGAAAACGTACCCGACCGGGCAGGAATGC
CGTCTTACCGTAGGAAGCGCCACGCGGTAGTCGGCCGTCCCGATGTGCTC
ACACGGTACCCGTTTGTGGACGATCTCGCGGGCGAACGGGGGGGCGGAGT
CGGTGCGGCCCTCAAACAGGCGACGCCCACTACTCCCGTGCAGCACCTCG
CCAAGCGCGAGATCAGGCGAGAAAACGTACCCGACCGGGCAGGAATGCCG
TCTTACCGTAGGAAGCGCCACGCGGTAGTCGGCCGTCCCGATGTGCTCAC
ACGGTACCCGTTTGTGGACGATCTCGCGGGCGAACGGGGGGGCGGAGTCG
GTGCGGCCCTCAAACAGGCGACGCCCACTACTCCCGTGCAGCACCTCGCC
AAGCGCGAGATCAGGCGACGGTGGATGAGAACCGGTGGATGAGAACACGG
CTGGCCCACGAGACGTTCTCCGAGCTGAAGGCGTCGGCGCTGGGCATTCG
CTTGTCAGATCTGCCCACAGCCCTGCAGTATCTGTTTTTCAGTGACTCGG
CGTCTCTCTTGCCGACGAAGGGGACGGGGCCACAAGTAGCGGGCGATAGC
GGAGGGAAACCGCCAGCTAGGTCAGCAAAGGACGTGCATCTTGTCATACG
GCTGGCCCACGAGACGTTCTCCGAGCTGAAGGCGTCGGCGCTGGGCATTC
GCTTGTCAGATCTGCCCACAGCCCTGCAGTATCTGTTTTTCAGTGACTCG
GCGTCTCTCTTGCCGACGAAGGGGACGGGGCCACAAGTAGCGGGCGATAG
CGGAGGGAAACCGCCAGCTAGGTCAGCAAAGGACGTGCATCTTGTCATGG
CACTCGCTCGAGAGTCTCTCTCGCCCACGTTGGCCCTGGCTGCTCGTGAC
ACGAGCACGCTCAGCAGCGCCAGTACACACGAGGGCCCGGAGACAGGATG
GGCTCGTGACGGACAGGGCACTCGCTCGAGAGTCTCTCTCGCCCACGTTG
GCCCTGGCTGCTCGTGACACGAGCACGCTCAGCAGCGCCAGTACACACGA
GGGCCCGGAGACAGGATGGGCTCGTGACGGACAGAACATGTTCATCAGCG
AGCGTCGATGGATGAAGTTGGTGGCCCACGTGGTCCGCCGCCTCTGGGAA
ATAGATGGAACCCCTCGCAGCGGTGACGCCTCTATCCGCCCCCCACGCAT
CGCCGTTGCCGACCCCTTGAGCGCAACCGCCGTCACAAAATTCCAGCCGC
CGTTGTGGCAACCAACCGGTGGCGGCGTAGTTACCGGGCGATCACCGGCG
AGACTGCCCGGACGAGACGGGGACGAAGAAAATGTTCAAGAGGCGTTCTC
GAGGTCCGCCGTTCCGTTCCGACCGGACAGCACGTGGGGGTCCGCGGCTG
CGTCGGGCGTAAGGACAGACGACCATGGCGCCGTGCCCGCCTCGCGTGCC
TCTCGTGTGTGGAACAAAATGCAGGGCGAGTCCGAGTGTTGGGCGGGCGC
GGGGCGGTCGTTGACGTGGGCGCCCGACATCAGCGTGGGGGCACAGTTGT
TCGATGAGTCCGGCACTAAGGAGGTGGATGTGCGGGAAGTTTGTGGTCGC
GGAGGAGATCACGACAGCGGAAGGCGTGACTCCGTCGCGAACATGTTCAT
CAGCGAGCGTCGATGGATGAAGTTGGTGGCCCACGTGGTCCGCCGCCTCT
GGGAAATAGATGGAACCCCTCGCAGCGGTGACGCCTCTATCCGCCCCCCA
CGCATCGCCGTTGCCGACCCCTTGAGCGCAACCGCCGTCACAAAATTCCA
GCCGCCGTTGTGGCAACCAACCGGTGGCGGCGTAGTTACCGGGCGATCAC
CGGCGAGACTGCCCGGACGAGACGGGGACGAAGAAAATGTTCAAGAGGCG
TTCTCGAGGTCCGCCGTTCCGTTCCGACCGGACAGCACGTGGGGGTCCGC
GGCTGCGTCGGGCGTAAGGACAGACGACCATGGCGCCGTGCCCGCCTCGC
GTGCCTCTCGTGTGTGGAACAAAATGCAGGGCGAGTCCGAGTGTTGGGCG
GGCGCGGGGCGGTCGTTGACGTGGGCGCCCGACATCAGCGTGGGGGCACA
GTTGTTCGATGAGTCCGGCACTAAGGAGGTGGATGTGCGGGAAGTTTGTG
GTCGCGGAGGAGATCACGACAGCGGAAGGCGTGACTCCGTCGCGATCGCA
AACGCCCGCAAGTCTGCCGTGAGGGACACTGTTGCCCGGCGGCGCTTGGA
AAGCCTAGACGGCGCAGCTGGCCACGGTGTTGCGGATGATGTTGAAAGTG
GCGCGGACAGAGATGGGCGATCGCAAACGCCCGCAAGTCTGCCGTGAGGG
ACACTGTTGCCCGGCGGCGCTTGGAAAGCCTAGACGGCGCAGCTGGCCAC
GGTGTTGCGGATGATGTTGAAAGTGGCGCGGACAGAGATGGGCGCATGTC
AAGCGCACCCCCTTTGCTTTCCCTGGCATCATTCAACGCGCCTCTCAGGG
GTCATACGCCGGGCGAGCATGCTCTGGACATCGCTAATGCATTCCTGGAG
TCCTCTTTGATGACTCGCTTGGCCGGGGGAGACTGGTGACATGTCAAGCG
CACCCCCTTTGCTTTCCCTGGCATCATTCAACGCGCCTCTCAGGGGTCAT
ACGCCGGGCGAGCATGCTCTGGACATCGCTAATGCATTCCTGGAGTCCTC
TTTGATGACTCGCTTGGCCGGGGGAGACTGGTGA
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