mRNA_H-elongata_contig20137.5680.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20137.5680.1
Unique NamemRNA_H-elongata_contig20137.5680.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A6H5JFL2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFL2_9PHAE)

HSP 1 Score: 497 bits (1279), Expect = 7.210e-171
Identity = 243/292 (83.22%), Postives = 266/292 (91.10%), Query Frame = 1
Query:   61 TTVAPGGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMKQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGGIDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            TT+ PG +ISNEWELDVYSRPV GADGKKLWE+LICD+TGN RHVSPIPSNMVNSREVR+TIE VIEAAPGGSKPTVIRFFRNAMFNMIDIAL+EV+VAVKPCRTTYAMYQWLE+RER+VYP M G++ TMKQPAFFDIR    TPTPLPDALRGEQYAFV +PVSEFRQG I+++N+GVG+LCPLDASLPDDAMIPGLA+FT RA  LATWMTGLEVA+FKADLK+REL LECGINTQYLVARVQGDQRKE   +Q FEEAKR++ GFHFVAVQ   DADDVAGFWLLKEV
Sbjct:   98 TTIKPGAKISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRRTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPAMAGFKPTMKQPAFFDIR----TPTPLPDALRGEQYAFVTMPVSEFRQGNINDENVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAYFKADLKNRELALECGINTQYLVARVQGDQRKE---AQGFEEAKRALGGFHFVAVQSNPDADDVAGFWLLKEV 382          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A836CLG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG2_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 3.730e-139
Identity = 204/293 (69.62%), Postives = 239/293 (81.57%), Query Frame = 1
Query:   61 TTVAPGGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMKQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGG-IDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            TT+ PG  IS++WE+DVYSRPV G DGKKLWE+L+CD+TGN +HV  IPSNMVNSREVRK +E +IE AP   +P+ IRFFRNAMFNMI+IAL EVDV V+PCRTTYA+Y WLE RER VYP M GY  TM Q  FFDIR    TP+ LPDALRG++YAFV LPVSEFR+GG ID+ NIG+G+LCP+D  +PDDAM+ GLA+FTKRA+ LATW++GLEVAF KADLK RELV+ECGI+TQYLVARV  DQR E   +QNFE  KRS+ G HFVAVQ++ D D VAGFWLLKEV
Sbjct:   74 TTIEPGATISDQWEMDVYSRPVVGKDGKKLWELLLCDSTGNFKHVERIPSNMVNSREVRKAVERIIEEAP--LRPSTIRFFRNAMFNMINIALSEVDVTVRPCRTTYALYNWLEARERNVYPEMEGYTPTMTQGNFFDIR----TPSRLPDALRGDKYAFVALPVSEFRKGGSIDDSNIGLGRLCPIDPEIPDDAMVQGLAVFTKRALPLATWLSGLEVAFMKADLKRRELVMECGISTQYLVARVTDDQRAE---AQNFEAGKRSLGGLHFVAVQEDPDIDQVAGFWLLKEV 357          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7S4D6F7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6F7_HETAK)

HSP 1 Score: 334 bits (857), Expect = 7.940e-108
Identity = 168/283 (59.36%), Postives = 213/283 (75.27%), Query Frame = 1
Query:   88 SNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMKQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGGIDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            +++WELDVYSRPV    GKKLWE+LI D++G  RH   IPSNMVNSREVRK IE  I+ A     P  IRFFRNAMFNMI+IAL E+DV V P RTTY++Y+WL+QRE+EVYP M GY+ TM QP+FFDI+    TP  LPDALRGEQYAFV LP   FR G I++ NIG GK+  L A +PDDAMI G+ + ++RA ALA W++GLEVA+ +ADL+ R+ VLE GI+T+YL+A+++ DQR E   +Q FE+ K  M+G HFV VQ++ +AD+V GFWLL+E 
Sbjct:   61 TDQWELDVYSRPVVDEKGKKLWELLITDSSGAFRHEEIIPSNMVNSREVRKRIEKAIDEAE--VPPKTIRFFRNAMFNMINIALSELDVNVVPSRTTYSLYEWLDQREKEVYPKMEGYKPTMVQPSFFDIK----TPEKLPDALRGEQYAFVSLPAECFRNGEINDDNIGCGKIFSLPADIPDDAMIQGMLLLSRRAGALAAWLSGLEVAYVRADLQRRDAVLETGIDTRYLMAKLRDDQRVE---AQAFEQGKARMQGVHFVGVQEDPEADEVEGFWLLREA 334          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7S2V5W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5W1_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.860e-105
Identity = 165/284 (58.10%), Postives = 205/284 (72.18%), Query Frame = 1
Query:   88 SNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMKQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGGIDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEVN 939
            S+EWE+DVYSRPV  A GKKLWE+LICD+TG  +H   +PSNMVNSREV+K IE VI+ AP   KP V+R+FR AM NM++IAL  +D+ V P RTTY + +WLEQRE+EVYP M GY   M  P   DIR    TP  LPDAL  +QYAFV LP+S FR G +  +NIG+GKLCP+D SLPDD M+ G+ I T+RA ALA WMTGLEVAF +ADLK +E++LE GI+TQ+ + R   +QR E   +Q FE  KR   G HF+AVQ E D ++V GFWLL+E +
Sbjct:   69 SDEWEVDVYSRPVKDARGKKLWEILICDSTGEFKHCQALPSNMVNSREVKKAIEKVIDDAP--VKPKVVRYFRVAMQNMLNIALGGLDMQVIPSRTTYRLLEWLEQREKEVYPQMDGYNPNMVNPPGLDIR----TPQTLPDALVADQYAFVALPISYFRNGEVSAENIGLGKLCPIDPSLPDDTMVQGVVIVTRRAKALAAWMTGLEVAFVRADLKKKEMILEVGISTQFYMVRFNENQRAE---AQVFENGKRQANGIHFLAVQKEFDEEEVEGFWLLREAS 343          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7R9Z2V2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z2V2_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.320e-97
Identity = 159/295 (53.90%), Postives = 212/295 (71.86%), Query Frame = 1
Query:   67 VAPGGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATM----KQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGG-IDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            V  G + + EWELD YSRPV   +GKKLWE+L+ D++G+ R    +PSN VNSRE+R+ +E+ +E A   SKP+ IRFFR AMFNMI+IAL EVDV  +P R T+A+ QWLE+R R+VYP M GY+ATM    + P+F D+R    TP  LPDALRGE+YAFV LP++EFR+GG +  +NIGVG+LCP+D  LP D+ + G+ + T RA ALA+W+ G EV+ FK DL+ R LV+E  I+ QYL+A++   QR EG     FEE K ++ G HF++VQ ++D DD AGFWLLKE+
Sbjct:   71 VIEGRQPTEEWELDCYSRPVM-VNGKKLWEVLLTDSSGSFRICETLPSNKVNSRELRRVVEEAMEDAD--SKPSTIRFFRGAMFNMINIALSEVDVVARPSRCTFALAQWLEERNRDVYPKMEGYRATMAGATRGPSFLDVR----TPVKLPDALRGEKYAFVSLPLAEFREGGGVTNENIGVGRLCPVDPDLPADSFVQGIVVLTTRAKALASWLAGTEVSGFKCDLRKRTLVMETDIDNQYLMAKLNDVQRAEGAA---FEEGKDALGGLHFISVQMDED-DDPAGFWLLKEI 354          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7S1YY94_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YY94_TRICV)

HSP 1 Score: 306 bits (783), Expect = 5.500e-97
Identity = 157/296 (53.04%), Postives = 211/296 (71.28%), Query Frame = 1
Query:   67 VAPGGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATM-----KQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGG-IDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            V PG   ++EWELD YSRPV    GKKLWE+L+ D++G+ R    +PSN VNSRE+R+ +E+ IE +   +KP+ IRFFR AMFNMI+IAL EVDV  +P R T+++ QWLE+R R+VYP M GY+ATM     + P+F D+R    TP  LPD+LRGE+YAFV LP++EFR+GG +   N+GVG+LCP+D  LP DA + G+ I T RA AL++W+ G EV+ FK DL+ R LV+E  I+ QYL+A++   QR EG     FEE K S+ G HF++VQ ++D+D  AGFWLLKE+
Sbjct:   29 VVPGRDPTDEWELDCYSRPVM-VGGKKLWEVLLTDSSGSFRLCETLPSNKVNSRELRRVVEEAIEESD--TKPSTIRFFRGAMFNMINIALSEVDVVARPSRCTFSLAQWLEERNRDVYPKMEGYRATMAGGTGRGPSFLDVR----TPVRLPDSLRGEKYAFVALPLAEFREGGGVTNDNVGVGRLCPIDPELPADAFVQGIVILTTRAPALSSWLAGTEVSGFKCDLRKRTLVMETDIDNQYLMAKLNDIQRAEGTA---FEEGKDSLGGLHFISVQVDEDSDP-AGFWLLKEI 313          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7S4M7P1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7P1_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.590e-96
Identity = 157/292 (53.77%), Postives = 210/292 (71.92%), Query Frame = 1
Query:   76 GGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATM----KQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGG-IDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            G   + EWELD YSRPV   +GKKLWE+L+ D++G+ R    +PSN VNSRE+R+ +E+ +E +   +KP+ IRFFR AMFNMI+IAL EVDV  +P R T+A+ QWLE+R R+VYP M GY+ATM    + P+F D+R    TP  LPDALRGE+YAFV LP++EFR+GG +  +NIGVG++CP+D  LP DA + G+ I T RA ALA+W+ G EV+ FK DL+ R LV+E  I+ QYL+A++   QR EG     FEE K ++ G HFV+VQ ++D DD AGFWLL+E+
Sbjct:   87 GREPTEEWELDCYSRPVM-VNGKKLWEVLLTDSSGSFRVCETLPSNKVNSRELRRVVEEAMEDSD--AKPSTIRFFRGAMFNMINIALSEVDVVARPSRCTFALAQWLEERNRDVYPKMDGYRATMAAGTRGPSFLDVR----TPVKLPDALRGEKYAFVSLPLAEFREGGGVTNENIGVGRICPVDPELPADAFVQGVVILTSRANALASWLAGTEVSDFKCDLRKRMLVMETDIDNQYLMAKLNDVQRAEGTA---FEEGKDALNGLHFVSVQTDED-DDPAGFWLLREI 367          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: B8C2R8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2R8_THAPS)

HSP 1 Score: 304 bits (778), Expect = 1.210e-95
Identity = 156/291 (53.61%), Postives = 207/291 (71.13%), Query Frame = 1
Query:   82 RISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMKQ-----PAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGG-IDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            ++S EWELD YSRPV     KKLWE+L+ D++GN++    +PSN VNSREVR+ +E++I+ +    KP+ IRFFR AMFNMI+IAL E+DV  KP R T+A+ QW+E R R+VYP M GY+ATM         F DIR    T   LPDALRGE+YAFVGLP++EF  GG ID  NIGVG+LCP+D++L  D+ + G+ I T RA ALA+W+ G EVA  KADL+ RELV+E  I+ QYL+A++  DQR+E      +EE K ++ G HF++VQ ++D DD AGFWLL+E+
Sbjct:   75 KVSEEWELDCYSRPVLVDGKKKLWEILMTDSSGNMKVCRALPSNKVNSREVRRVVEEIIDESE--VKPSTIRFFRGAMFNMINIALSEIDVIAKPSRCTFALAQWIEDRNRDVYPKMEGYRATMSGIGGIGGTFLDIR----TAVKLPDALRGEKYAFVGLPLAEFLPGGGIDNNNIGVGRLCPVDSTLAADSFVQGVVILTPRAKALASWLAGTEVAGLKADLRKRELVMETDIDNQYLMAKLNDDQRREAAV---YEEGKDALNGLHFISVQKDED-DDPAGFWLLREI 355          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7S2F341_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F341_9STRA)

HSP 1 Score: 300 bits (768), Expect = 2.670e-94
Identity = 147/295 (49.83%), Postives = 208/295 (70.51%), Query Frame = 1
Query:   58 VTTVAPGGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVD-VAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMKQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGGIDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEVN 939
            V     G   ++ WELD YSRPV   +GKK+WE+LICD++G  +HV  IPSN VNSREVR  IE VI+      +P VIRFFRN+M N++ IAL ++  + V+P R+TYAMYQWLE+R + VYP MPG++ +M +     + ++++TP  LPD LR +Q+AFV LP+SE   GG++ +NIGVG++CPL   LP+D+M+ G+   T R   LA+W +G ++AF +ADLK RE+V+E G++T+YL+AR+  +QR EG   Q FE  K  ++G HFVA+Q+    D+VAGFWLL+EV+
Sbjct:   57 VDATGTGTAGTDVWELDCYSRPVMAKNGKKVWELLICDSSGVFQHVEEIPSNKVNSREVRGRIEKVIDNV--AVRPRVIRFFRNSMLNILSIALNDIGGIKVEPSRSTYAMYQWLEERNKNVYPTMPGFKKSMVKSGGNGMFLDISTPDRLPDMLRADQFAFVSLPLSEIIDGGVNPENIGVGQMCPLPKGLPEDSMVQGVLFLTTRGDNLASWFSGTDLAFMRADLKRREMVMEVGLSTRYLMARLNEEQRIEG---QAFEAGKTVLKGLHFVAIQNTATDDEVAGFWLLREVD 346          
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Match: A0A7S3QE68_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QE68_9STRA)

HSP 1 Score: 299 bits (765), Expect = 6.820e-94
Identity = 157/295 (53.22%), Postives = 206/295 (69.83%), Query Frame = 1
Query:   67 VAPGGRISNEWELDVYSRPVTGADGKKLWEMLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFRNAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATM----KQPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQ-GGIDEKNIGVGKLCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVLECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADDVAGFWLLKEV 936
            + P  + S EWELD YSRPV   +GKKLWE+L+ D+ G+ R    +PSN VNSRE+R+ IED IE A    KP ++RFFR AMFNMI+IAL EVDV  KP R T+A+ QWLE+R R +YP M GY+ATM     + +F D+R    TP  LPDALRGE+YAFV LP++EF + G ID  NIGVG+LCP+D +LP D+ + G+ I T RAVALA+W+ G E++ F ADL+ R LV++  I  QYL+A++   QR+E      FEE K  + G HFV+VQ++ D+D  AGFWLL+E+
Sbjct:   58 IIPNVKPSEEWELDCYSRPVM-VNGKKLWEVLVTDSNGSFRLCETLPSNRVNSRELRRVIEDAIEQAE--IKPNMVRFFRGAMFNMINIALSEVDVVAKPSRCTFALAQWLEERNRSIYPAMEGYRATMAGGSSRASFLDVR----TPIKLPDALRGEKYAFVALPLAEFMEDGSIDVDNIGVGRLCPVDDTLPADSFVQGIVILTSRAVALASWIGGTELSGFCADLRKRTLVMDTDIENQYLMAKLNDLQREEAAA---FEEGKDDLNGLHFVSVQEDDDSDP-AGFWLLREI 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20137.5680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFL2_9PHAE7.210e-17183.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLG2_9STRA3.730e-13969.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D6F7_HETAK7.940e-10859.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V5W1_9STRA1.860e-10558.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Z2V2_9STRA1.320e-9753.90Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1YY94_TRICV5.500e-9753.04Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4M7P1_9STRA1.590e-9653.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8C2R8_THAPS1.210e-9553.61Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2F341_9STRA2.670e-9449.83Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3QE68_9STRA6.820e-9453.22Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20137contigH-elongata_contig20137:1564..6183 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.0
Seed ortholog evalue3.2e-120
Seed eggNOG ortholog2880.D7G764
Preferred nameTAB2
GOsGO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009639,GO:0009640,GO:0009657,GO:0009658,GO:0009704,GO:0009791,GO:0009987,GO:0010467,GO:0015979,GO:0016043,GO:0019538,GO:0019684,GO:0022607,GO:0032501,GO:0032502,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0048564,GO:0048856,GO:0050896,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.photosystem I assembly
EggNOG OGs2CDXI@1,2QVJR@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF1092
Ec32 orthologEc-01_010890.1
Exons6
Model size1608
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20137.5680.1prot_H-elongata_contig20137.5680.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20137 2241..6027 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930133.0934212-UTR-H-elongata_contig20137:1563..18841622930133.0934212-UTR-H-elongata_contig20137:1563..1884Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20137 1564..1884 -
1691679293.433101-UTR-H-elongata_contig20137:1563..18841691679293.433101-UTR-H-elongata_contig20137:1563..1884Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20137 1564..1884 -
1622930133.109905-UTR-H-elongata_contig20137:1898..22401622930133.109905-UTR-H-elongata_contig20137:1898..2240Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20137 1899..2240 -
1691679293.4427762-UTR-H-elongata_contig20137:1898..22401691679293.4427762-UTR-H-elongata_contig20137:1898..2240Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20137 1899..2240 -
1622930133.1967297-UTR-H-elongata_contig20137:6027..61831622930133.1967297-UTR-H-elongata_contig20137:6027..6183Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20137 6028..6183 -
1691679293.5159557-UTR-H-elongata_contig20137:6027..61831691679293.5159557-UTR-H-elongata_contig20137:6027..6183Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20137 6028..6183 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930133.1251163-CDS-H-elongata_contig20137:2240..23591622930133.1251163-CDS-H-elongata_contig20137:2240..2359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 2241..2359 -
1691679293.4520545-CDS-H-elongata_contig20137:2240..23591691679293.4520545-CDS-H-elongata_contig20137:2240..2359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 2241..2359 -
1622930133.139001-CDS-H-elongata_contig20137:2803..29031622930133.139001-CDS-H-elongata_contig20137:2803..2903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 2804..2903 -
1691679293.4621966-CDS-H-elongata_contig20137:2803..29031691679293.4621966-CDS-H-elongata_contig20137:2803..2903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 2804..2903 -
1622930133.1518626-CDS-H-elongata_contig20137:4846..49671622930133.1518626-CDS-H-elongata_contig20137:4846..4967Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 4847..4967 -
1691679293.4719684-CDS-H-elongata_contig20137:4846..49671691679293.4719684-CDS-H-elongata_contig20137:4846..4967Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 4847..4967 -
1622930133.1625752-CDS-H-elongata_contig20137:5211..53241622930133.1625752-CDS-H-elongata_contig20137:5211..5324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 5212..5324 -
1691679293.482022-CDS-H-elongata_contig20137:5211..53241691679293.482022-CDS-H-elongata_contig20137:5211..5324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 5212..5324 -
1622930133.1766684-CDS-H-elongata_contig20137:5691..60271622930133.1766684-CDS-H-elongata_contig20137:5691..6027Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 5692..6027 -
1691679293.4949296-CDS-H-elongata_contig20137:5691..60271691679293.4949296-CDS-H-elongata_contig20137:5691..6027Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20137 5692..6027 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20137.5680.1

>prot_H-elongata_contig20137.5680.1 ID=prot_H-elongata_contig20137.5680.1|Name=mRNA_H-elongata_contig20137.5680.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=263bp
MLICDATGNLRHVSPIPSNMVNSREVRKTIEDVIEAAPGGSKPTVIRFFR
NAMFNMIDIALREVDVAVKPCRTTYAMYQWLEQREREVYPNMPGYQATMK
QPAFFDIRVNLNTPTPLPDALRGEQYAFVGLPVSEFRQGGIDEKNIGVGK
LCPLDASLPDDAMIPGLAIFTKRAVALATWMTGLEVAFFKADLKSRELVL
ECGINTQYLVARVQGDQRKEGKKSQNFEEAKRSMEGFHFVAVQDEQDADD
VAGFWLLKEVNS*
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mRNA from alignment at H-elongata_contig20137:1564..6183-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20137.5680.1 ID=mRNA_H-elongata_contig20137.5680.1|Name=mRNA_H-elongata_contig20137.5680.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4620bp|location=Sequence derived from alignment at H-elongata_contig20137:1564..6183- (Himanthalia elongata Himel1 dioecious)
GCGGCCCCGTCCTCACCGCCTCCGGCGGAAAAATCACTCCCGTCTTCACC GCAACCAGTGACAACAGTCGCCCCCGGAGGGAGGATTAGCAACGAATGGG AGCTAGACGTTTACTCCAGACCGGTAACCGGGGCAGACGGGAAAAAGTTG TGGGAAATGCTTATCTGCGATGCTACTGGTAACTTGAGGCACGTTTCGCC CATCCCGAGCAACATGGTGAACTCGCGTGAGGTCCGGAAGACGATCGAGG ATGTGATTGAAGCAGCGCCGGGCGGTTCGAAGCCCACGGTAATTCGCTTC TTCCGCAATGCCATGTTCAACATGATCGATATAGCGCTGAGGGAGGTGGA CGTTGCGGTAAAGCCTTGTCGAACGACTTACGCCATGTATCAGTGGCTGG AGCAGCGCGAGCGCGAGGTTTACCCCAACATGCCCGGCTATCAGGCAACC ATGAAACAGCCGGCTTTCTTCGACATCCGGGTGAATCTGAACGTACTGGC GAATGTGTCCGTCGATGTGCTGGGCTGAACATCCAAAGGGACACTTTACA AGAAGAAAGCTTAAAAACCATCCAGGGTGTCTTTTGAGGAAAGATGTGGA ACTTTCCTTAAGAATCCTTTCAGGAGCACTATATGGCTCCTACCATATGA CAATGTCGAATCTGCCTTTGCCTGTGTGTACAGATTGGAATAATCAATGG TACACCTCGTGCAGTGAGTATATATATATCAGAAATACTGGCGTAGCACG CAGCGTGGTGAGGTACGAAGACTCGTGAGCGCTGATCCATCACCGTTTTT CTGCCCTTATCCTACTTATCACCCCTGATGTATCACCTCCCCCCTTCCCG TCCATCAAGACGCCGACACCATTACCAGACGCTCTCCGAGGAGAGCAATA CGCGTTCGTGGGTTTACCGGTGTCTGAGTTCCGTCAGGGCGGCATCGACG AAAAAAACATTGGGGTTGGCAAGTGAGCCTGAAGCTGTGCCACCGTGAGG GGGCTCCTCGCAGCAGACGCGAGAAAACAATTTGTCATCCGGTGTTCCAA TAGATAGAAGCGTTTCAAGCGATCACCCTGTTTCCTCTATTGGGCGCGTG ATGGAGATTATATTAGCTACCGTGCCTACTTCATGAGTGTTCGGAGATTC CCCCTCTGTCAGGACCCTGACCCTGGATTCTTCGTGGGTTTGTTCTCTCG CACTTTCACCTACCAGGCTTTGCCCTCTAGACGCGTCCCTCCCGGACGAC GCAATGATCCCGGGACTTGCGATCTTTACGAAACGGGCAGTAGCCTTGGC GACCTGGATGACGGGCCTCGAGGTGGCCTTCTTCAAGGTACAGTACCCTT GGTTCGTCTATTATAGCATGTCAAGTATTTAACCACCAACCGTAGTCTCC AATGGAGTCAAAGCGAGGATAACTCCTTCAATCCCTAACCCTGAATCTTA ATCCCACTGCTTGACCGAGACATCCGACAAGTCCTTGCCAACCGTCTAGG CTTTTATGTATAGGCTCTAGCACCAAAAAAATAATATCTTCCCCTGGTTA CATTATTTTTTTCTAGACTTACAGAAGGCATATTATCCCTGGATACATTA TGGATAAATGAGCTTCGAAAACAACTGTCGAAGTACGGAATATATTTCAG AATATACGAAAAGTTAAGCACTTGGACATCGAGCAGGTTTCCACATGATT GTCCATTGTCCCCCACGTTATTCCAGGTGTTTGTCAACGAAAGTCGTAGA GTAGTGAAATGGAAGACCTCGGTTAAGAGAGTGGTGGTTGTGGACGAATT TGTTGGGATGTCTGATACTCCTGATGGGCTTCAAATGCAGATTGACCCAG CGAAAAAAAGGCCGATAATTGGAGACTGTCTGCCAGCGTTAAAACGTGTA CCGTGGTGATATACAACGCAGATATTGAGGAACCAGTAGATATCAGTTGG AGATGCTTGTGTAAAGAATATCAATTGAAGAATCAATACACATAATGTAT GTGTATGTGTGTTGGTCGCACTTTTAGCAGAAAGAAGAGCCGGATATGGT TGCCTTCTGCTCGTGGTCAGCTGAACAGGGAAAATAATTTTCCCCTGTCC CCATTAATAATGTATTGGATTAGAGATCGCAAACGACTGTTAATGAGAAG TACATGCGCAAATAAGCGGAAAAGGGCAAAGCGCGGGCAGGGAAATGGCA TCCAATACTCACAAACAGGCATCGTTTTGATATACGCAACAAGTTGACAA TTATGAAGAGCGTAATCGTCCCGCTGCTAGAGTACGCCCGAGAAATACCG AAATGGAATTCGAAAATAGAAAAGGAGTTGGAAGCGGCACATATGAAAGC AGCGAAGATCATCTACGGTGCTCCAAGCACTAGGGACACAAGTAATGCAG CATTAAGAGTAGATTTGGGCATTCAATCGCTGCGACAGGGAAGAGACACA ATAAAGCTGAAAGGGCTGGACCGTATGCAAAAATGAGAGACGAGAGATTT CCGATAAGAGCAAAAGAGTTGGAGTGGACAGGCAAGGCGAAGGGCAGACA ATCCATCGAGTGGGCTAATGTGCAGAAAATGTTAAAACGATTGGATACCC TAGAAAAGAGAACGTTGGCAATGAAAAGCTAATTCATATCTGGCATATGA AGAGGGGAAGAACAGGCACATTTGTATGTAAAAAAGCTCAGGAATTCCGA AAATCAATTAGGGAGGGTGAAGGAGAATCAAAATTGTCCGGAATGATTTG ACGAAGGAAAAGGATTGTGAAATATAGTATACAAGTATTGAAACATGGAC CAATGGCTTAAGGAACAAAGTTGAAATAAAAAATCAGGACTGGAGACGTG GACTCCCGCAAACGTAGACGGGATATTTGGAGAAGTAGATGAGAAAGACG AGGTCAAGTATAAATAAGATTACGGCTCGGATAAACGTGAAGACCGCATC CACGTAATGGAGAGAGTAAACGTGACTGAACTGCGAAAATTTAAAGGCTG GAGACTATGAAGCCTCGGACAGCCAGACGAAGGTGGTGTAGCTATACTGG GGGATATAATGTGGCCTGAGATGGACAAAAATGTTGTTGACAGGATGGGA AAATATTTTTGCATCACCTTTGGTAAAATAGGAACGATTGGCCATCGGCA ATCGTTCCCGTAGGAACAGTGTTCCTTCCCGAGGACGCGTCGTTAATGGT CTAACATCTAAGGCATGCAAAACTCGAGCACACATGCATCCCTCCCGCAT CATACGTTGTCATGCCCACGTTGCTCTCAGGCTGACCTCAAGAGCAGGGA GCTCGTGCTGGAATGCGGAATCAACACGCAGTACCTCGTTGCGCGCGTAC AGGGGGACCAACGAAAAGAAGGCAAGAAGTGTCGCAAAAAACGCCCCCGA AAGTACGGTATACAGCTAAGTGGGCTACGTGTACAGAACGTGTAAACGGT GGTGCTTTTCATCTTCAACTTTATGCGCAGTTCGGTGTACAGGTGGGGCA TTGATAACCCTACTCGAGGTTGGGGATCGGCCGAGTTGGTATAATGAGCG AAAAAAAACAAGCATTTGAGCCCATCCATAGCAGTCCTTGGGTTACGTTT ACGAAGCCGTAACTCTTGTTTCAGGAGTACCGCGTCAAGATTCCCCGAGT CCAGCGTCCCAACTGTATAGTGTGTGCATGCATTGATGTCCAAGCCGACG GATCTCTTTCCAAACCTCGTTAGCTGCTTGTATTTTGCCGTCCGTGCTTG TCTGCATCCCTGACTCTTACGACCCCCCCACTCCCCCCTACACCTCTTCC CATCCTGCAAATCACGCCTCGCAGCTCAAAACTTCGAAGAGGCCAAGCGG TCCATGGAGGGGTTTCATTTCGTCGCGGTGCAAGACGAGCAGGACGCCGA TGACGTGGCAGGCTTCTGGTTGCTGAAAGAAGTTAATTCGTAAACTCGTC GCTTGGGGTGGGGGGCCGGGCATGGTCGCTTATCTCCCTGCCGCTACCTC GCACAGAACACGTCATCGCCTCTTTAATGTCTGCTCGTTTGTGTGACTCT TTGCACCGTCGTTGGCACTCGCTGAGAAATCACAAATGGCTACTGGAGAT ACGTGGGGATCGATATTTACGATGCGAACGATACGTGTATTGGGCATCAT TCTTTAGGATAGCATCAATGGTGTTCCAACAAGAGCTTATGCGCTGGGTA GCAACCCCTTCGTGGTTGCCCAAGCCCGTACTTGTCTAACGCTTTTGTCT CTGTTAACCTCCATCACTAATCAAGCTGCCAGCAAGTGCACATGACTGAA ATACCTTCTATCGGGTACCTGAGATACGCACGAGGTATTTGTACTTGATT CACAAATATGAAATGTTCTTCGTCGACAGCTCCATTCGACCTTATTTCCT GACCAAACTAGAAACCATTATCTAAGGTAATGATAAAATAGGAAAATAAA TGCACTCGCTATTGAATCTGCTTCGGGATGCAGCACCCAGCGTCGAGATT TTTGGCAACGCCCTGCAAAAATGCCTTCGCCATTGACCGAGTAACAACCG GCTCCGCGAACTGCAGGGTCATGAAAAGCTCGCCGCCCACTGTGCCGCAG CTCAGCTGAAACAGGCTGCC
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Coding sequence (CDS) from alignment at H-elongata_contig20137:1564..6183-

>mRNA_H-elongata_contig20137.5680.1 ID=mRNA_H-elongata_contig20137.5680.1|Name=mRNA_H-elongata_contig20137.5680.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1578bp|location=Sequence derived from alignment at H-elongata_contig20137:1564..6183- (Himanthalia elongata Himel1 dioecious)
ATGCTTATCTGCGATGCTACTGGTAACTTGAGGCACGTTTCGCCCATCCC
GAGCAACATGGTGAACTCGCGTGAGGTCCGGAAGACGATCGAGGATGTGA
TTGAAGCAGCGCCGGGCGGTTCGAAGCCCACGGTAATTCGCTTCTTCCGC
AATGCCATGTTCAACATGATCGATATAGCGCTGAGGGAGGTGGACGTTGC
GGTAAAGCCTTGTCGAACGACTTACGCCATGTATCAGTGGCTGGAGCAGC
GCGAGCGCGAGGTTTACCCCAACATGCCCGGCTATCAGGCAACCATGAAA
CAGCCGGCTTTCTTCGACATCCGGGTGAATCTGAACATGCTTATCTGCGA
TGCTACTGGTAACTTGAGGCACGTTTCGCCCATCCCGAGCAACATGGTGA
ACTCGCGTGAGGTCCGGAAGACGATCGAGGATGTGATTGAAGCAGCGCCG
GGCGGTTCGAAGCCCACGGTAATTCGCTTCTTCCGCAATGCCATGTTCAA
CATGATCGATATAGCGCTGAGGGAGGTGGACGTTGCGGTAAAGCCTTGTC
GAACGACTTACGCCATGTATCAGTGGCTGGAGCAGCGCGAGCGCGAGGTT
TACCCCAACATGCCCGGCTATCAGGCAACCATGAAACAGCCGGCTTTCTT
CGACATCCGGGTGAATCTGAACACGCCGACACCATTACCAGACGCTCTCC
GAGGAGAGCAATACGCGTTCGTGGGTTTACCGGTGTCTGAGTTCCGTCAG
GGCGGCATCGACGAAAAAAACATTGGGGTTGGCAAACGCCGACACCATTA
CCAGACGCTCTCCGAGGAGAGCAATACGCGTTCGTGGGTTTACCGGTGTC
TGAGTTCCGTCAGGGCGGCATCGACGAAAAAAACATTGGGGTTGGCAAGC
TTTGCCCTCTAGACGCGTCCCTCCCGGACGACGCAATGATCCCGGGACTT
GCGATCTTTACGAAACGGGCAGTAGCCTTGGCGACCTGGATGACGGGCCT
CGAGGTGGCCTTCTTCAAGGCTTTGCCCTCTAGACGCGTCCCTCCCGGAC
GACGCAATGATCCCGGGACTTGCGATCTTTACGAAACGGGCAGTAGCCTT
GGCGACCTGGATGACGGGCCTCGAGGTGGCCTTCTTCAAGGCTGACCTCA
AGAGCAGGGAGCTCGTGCTGGAATGCGGAATCAACACGCAGTACCTCGTT
GCGCGCGTACAGGGGGACCAACGAAAAGAAGGCAAGAAGTGCTGACCTCA
AGAGCAGGGAGCTCGTGCTGGAATGCGGAATCAACACGCAGTACCTCGTT
GCGCGCGTACAGGGGGACCAACGAAAAGAAGGCAAGAAGTCTCAAAACTT
CGAAGAGGCCAAGCGGTCCATGGAGGGGTTTCATTTCGTCGCGGTGCAAG
ACGAGCAGGACGCCGATGACGTGGCAGGCTTCTGGTTGCTGAAAGAAGTT
AATTCGTAACTCAAAACTTCGAAGAGGCCAAGCGGTCCATGGAGGGGTTT
CATTTCGTCGCGGTGCAAGACGAGCAGGACGCCGATGACGTGGCAGGCTT
CTGGTTGCTGAAAGAAGTTAATTCGTAA
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