mRNA_H-elongata_contig1987.5570.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1987.5570.1
Unique NamemRNA_H-elongata_contig1987.5570.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 7.730e-78
Identity = 136/188 (72.34%), Postives = 151/188 (80.32%), Query Frame = 3 
Query:  288 SARLPLLAAANISRRNMSTKKDKNVASTI--PGMIKGFGLRQKAPNTGNTALGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALLQLSETKE 845
            SA + L A    SRR MS+ +    ++T   PG IKGFG RQK  + GNTALGKGFDLMEDD  SRKK+VI GYDPHGFQLGDGVDVRGSMIC PNSFVLW+PKR  DIT+ESL ++ELV PKID+ I+GVGERMT RLDP LVKHL+SK I VEQMDTVNACSTFNVLNAEDRRVA ALLQLS  +E
Sbjct:   20 SAHVQLTALLFCSRRGMSSARGGKGSNTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 207
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A1V9YKK9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKK9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.680e-28
Identity = 56/127 (44.09%), Postives = 88/127 (69.29%), Query Frame = 3 
Query:  444 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            G D+ ++ +    K+ IA YD  GF + D V++RGS+   P+  ++W+P    +IT+ESL++  +  P I+I ++G G+R+  +LDPKLV++L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:   23 GHDMHKEMMTGTSKVSIAEYDDGGFVVND-VNMRGSIALLPSIAMMWKPNTMEEITVESLNIFTVANPPIEILVLGCGKRIARQLDPKLVEYLKSHGIVVEYLDSFNACATFNILNAEDRKVAAAIL 148
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A8K1C5C2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5C2_PYTOL)

HSP 1 Score: 118 bits (296), Expect = 5.190e-27
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 3 
Query:  444 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            G D+ ++ +    KI +  YD  GF + D V++RG ++ FP   +LW+PKR  +IT ESL L     P ++I ++G G R++ +LDP+L + L    I VE  D+ NACSTFN+LNAEDR+VA A+L
Sbjct:   36 GHDMHKEMLNGTAKISVTEYDDGGFVVND-VNLRGGVVLFPEIAMLWKPKRFEEITKESLELFTFANPPVEILVLGCGARLSRQLDPELAEFLKVNGIVVEYSDSANACSTFNILNAEDRKVAAAIL 161
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A7S1UI11_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI11_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.470e-27
Identity = 60/138 (43.48%), Postives = 90/138 (65.22%), Query Frame = 3 
Query:  435 LGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALLQLSETKEE 848
            +G+G D+M        KI + G++  GF +G  ++++ S++  PNSF LW+P+   +IT+ESL L  L+TPKI++ IIG GER  E L P+L+++   K I VE M T +A +T+NVL +EDR VA ALL +  T +E
Sbjct:   43 IGRGHDIMSGVNEGTMKITVDGFEDEGFIIGS-INIKSSVLLLPNSFFLWKPRTVDEITVESLLLPTLITPKIEMLIIGKGERNVEPLAPELLRYFKEKGIVVEHMSTSHALATYNVLTSEDRNVAAALLTIVPTDKE 179
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A067CV35_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV35_SAPPC)

HSP 1 Score: 117 bits (294), Expect = 6.590e-27
Identity = 54/127 (42.52%), Postives = 89/127 (70.08%), Query Frame = 3 
Query:  444 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            G D+ ++ +    K+ I+ YD  GF + D V++RGS+   PN  ++W+P+   +IT+ESL++  +  P I+I ++G G+R+ ++L+P LV++L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:   25 GHDMHKEMMTGTSKVSISEYDDGGFVVND-VNMRGSVALLPNIAMMWKPRSLDEITIESLNVFTVANPPIEILVLGCGKRIAKQLEPSLVEYLKSNGIVVEYLDSFNACATFNILNAEDRKVAAAIL 150
[Close]
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC)

HSP 1 Score: 119 bits (298), Expect = 9.330e-27
Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 3 
Query:  435 LGKGFDLM----EDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTER-LDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALLQLSETKEET 851
            LGKG D++    E++ G R++  + GYD  GF++ D V+ RGS++  P +  LW+PK+  +IT ESL  L +V P I+I IIG GE +  R L    +K L++  ++VE MDT +ACSTFN+LN EDRRVA ALL +    EE+
Sbjct:   68 LGKGIDVLAVGNEEEAG-RERTFLLGYDGQGFEVRD-VNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAEES 209
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A3R7H579_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H579_9STRA)

HSP 1 Score: 114 bits (284), Expect = 8.840e-26
Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 3 
Query:  453 LMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            + ++ +    K+ I  YD  GF + + V++RG +  F    +LW+PKR  DIT E L +  +  P I+I I+G GER++  LDPKL + L    I VE +DTVNAC+TFN+LNAEDRRVA ALL
Sbjct:    1 MHKEMLNGTAKVSITEYDEGGFVINN-VNMRGGVALFSEIAMLWKPKRMEDITSEHLAVFTVANPPIEILILGCGERISHMLDPKLKEMLKVNGIVVEYLDTVNACATFNILNAEDRRVAAALL 123
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BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A5D6XPN1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPN1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.080e-26
Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 3 
Query:  432 ALGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            A+  G DL ++ +    K+ +  YD  GF + D V++RG +  +P   +LW+PKR  +IT ESL +  +  P I+I ++G G R+   LDP++ + L    I VE +D+VNAC+TFN+LNAEDR+VA A+L
Sbjct:   21 AINYGHDLHKEMLNGTAKLSVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESLTVFTVANPPIEILVLGCGPRIQHHLDPEIKQFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAIL 150
[Close]
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A6G0XVP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVP0_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.480e-25
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 3 
Query:  444 GFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            G D+ ++ +    K+ I  YD  GF + + V++RG++  FP   +LW+PK   +IT ESL +  +  P ++I ++G G+R+   LDP LV +L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:   22 GHDMHQEMMMDSPKVAITEYDDGGFVVNE-VNMRGAIALFPEIAMLWKPKTMDEITKESLTVFTVANPPVEILVLGCGKRIPRLLDPSLVDYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAIL 147
[Close]
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Match: A0A485LLY5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY5_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.590e-25
Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 3 
Query:  402 RQKAPNTGNTALGKGFDLMEDDVGSRKKIVIAGYDPHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKIDIAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRRVAVALL 824
            RQ     G   +  G D+ ++ +    K+ I  YD  GF + + V++RG++  FP   +LW+P+   +IT ESL +  +  P ++I ++G G+R+   LDP LV++L S  I VE +D+ NAC+TFN+LNAEDR+VA A+L
Sbjct:    8 RQLTRPAGVRWINYGHDMHKEMMTGTMKVAITEYDDGGFVVNE-VNLRGAIALFPEIAMLWKPRTMDEITKESLAVFTVANPPVEILVLGCGKRIPRLLDPSLVEYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAIL 147
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1987.5570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV73_ECTSI7.730e-7872.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9YKK9_9STRA9.680e-2844.09NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8K1C5C2_PYTOL5.190e-2744.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1UI11_9STRA6.470e-2743.48Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A067CV35_SAPPC6.590e-2742.52Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
K8Z3H4_NANGC9.330e-2745.83Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidac... [more]
A0A3R7H579_9STRA8.840e-2646.77Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A5D6XPN1_9STRA9.080e-2641.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0XVP0_9STRA3.480e-2542.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LLY5_9STRA3.590e-2539.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1987contigH-elongata_contig1987:2386..7816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score264.2
Seed ortholog evalue6.4e-68
Seed eggNOG ortholog2880.D7FV73
Preferred nameNDUFAF3
KEGG rclassRC00002,RC00015
KEGG koko:K00873,ko:K09008,ko:K09228,ko:K14792,ko:K17770
KEGG TC3.A.8.1
KEGG ReactionR00200,R00430,R01138,R01858,R02320
KEGG Pathwayko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04714,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04714,map04922,map04930,map05165,map05203,map05230
KEGG ModuleM00001,M00002,M00049,M00050
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0010257,GO:0016020,GO:0016043,GO:0019866,GO:0022607,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032981,GO:0033108,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0065003,GO:0071840
EggNOG free text desc.mitochondrial respiratory chain complex I assembly
EggNOG OGsKOG3363@1,KOG3363@2759
EC2.7.1.40
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03000,ko03009,ko03029,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Ec32 orthologEc-12_007300.1
Exons5
Model size3098
Cds size798
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930121.5121193-UTR-H-elongata_contig1987:2385..46291622930121.5121193-UTR-H-elongata_contig1987:2385..4629Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1987 2386..4629 -
1691679288.9692764-UTR-H-elongata_contig1987:2385..46291691679288.9692764-UTR-H-elongata_contig1987:2385..4629Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1987 2386..4629 -
1622930121.6179354-UTR-H-elongata_contig1987:7760..78161622930121.6179354-UTR-H-elongata_contig1987:7760..7816Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1987 7761..7816 -
1691679289.0527005-UTR-H-elongata_contig1987:7760..78161691679289.0527005-UTR-H-elongata_contig1987:7760..7816Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1987 7761..7816 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930121.5333614-CDS-H-elongata_contig1987:4629..47251622930121.5333614-CDS-H-elongata_contig1987:4629..4725Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 4630..4725 -
1691679288.9827876-CDS-H-elongata_contig1987:4629..47251691679288.9827876-CDS-H-elongata_contig1987:4629..4725Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 4630..4725 -
1622930121.5508218-CDS-H-elongata_contig1987:5432..55361622930121.5508218-CDS-H-elongata_contig1987:5432..5536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 5433..5536 -
1691679288.9979756-CDS-H-elongata_contig1987:5432..55361691679288.9979756-CDS-H-elongata_contig1987:5432..5536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 5433..5536 -
1622930121.5678134-CDS-H-elongata_contig1987:5836..59911622930121.5678134-CDS-H-elongata_contig1987:5836..5991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 5837..5991 -
1691679289.0162797-CDS-H-elongata_contig1987:5836..59911691679289.0162797-CDS-H-elongata_contig1987:5836..5991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 5837..5991 -
1622930121.5829146-CDS-H-elongata_contig1987:6616..67871622930121.5829146-CDS-H-elongata_contig1987:6616..6787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 6617..6787 -
1691679289.0272164-CDS-H-elongata_contig1987:6616..67871691679289.0272164-CDS-H-elongata_contig1987:6616..6787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 6617..6787 -
1622930121.5981526-CDS-H-elongata_contig1987:7488..77601622930121.5981526-CDS-H-elongata_contig1987:7488..7760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 7489..7760 -
1691679289.0375855-CDS-H-elongata_contig1987:7488..77601691679289.0375855-CDS-H-elongata_contig1987:7488..7760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1987 7489..7760 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1987.5570.1prot_H-elongata_contig1987.5570.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1987 4630..7760 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1987.5570.1

>prot_H-elongata_contig1987.5570.1 ID=prot_H-elongata_contig1987.5570.1|Name=mRNA_H-elongata_contig1987.5570.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
MEALPRPLLLATRPCVRARRLWASGLGGGGVDPCRDISSSATTPFVEQTS
AAQGARTGTSPPLSPISVALSPYDRRCSARLPLLAAANISRRNMSTKKDK
NVASTIPGMIKGFGLRQKAPNTGNTALGKGFDLMEDDVGSRKKIVIAGYD
PHGFQLGDGVDVRGSMICFPNSFVLWEPKRARDITMESLHLLELVTPKID
IAIIGVGERMTERLDPKLVKHLSSKRISVEQMDTVNACSTFNVLNAEDRR
VAVALLQLSETKEET*
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mRNA from alignment at H-elongata_contig1987:2386..7816-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1987.5570.1 ID=mRNA_H-elongata_contig1987.5570.1|Name=mRNA_H-elongata_contig1987.5570.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5431bp|location=Sequence derived from alignment at H-elongata_contig1987:2386..7816- (Himanthalia elongata Himel1 dioecious)
CTGAGAACCAGACGAACGCGAGTAACAAGCGGTGAACGCGGGCTGCCACC
GAGAAAATGGAAGCGTTACCGAGGCCCTTACTTCTCGCAACACGACCATG
CGTGAGAGCCAGGCGACTGTGGGCGTCTGGTCTGGGCGGCGGTGGTGTGG
ACCCATGTAGAGATATCTCTTCGTCAGCGACCACGCCGTTCGTTGAACAG
ACCAGTGCTGCTCAGGGAGCGAGAACAGGGACGTCTCCCCCCTTGTCGCC
TATTTCTGTAGCATTATCGCCGTATGATAGGCGTTGCTCGGCACGGTTGC
CTTTGTTGGCTGCCGCAAATATCAGCAGGTTTGTCTAGCACGAGTCTCGG
GTGGGACCTGCTCCCTCTCTTACGTTTGCCCCAGGCATTATTTGGTTATC
ACATTTACAGCAGAGTATAGAGGCCTCGGTTTCATTTAGGGTTTCTTGGC
CCATGTTGGAACTTGTCTCGGCCTTCGTTTCTATATAGGATCTTGCGGCT
AAAACTTTGTGTGCGAATGGTGCTGCAAAAAAACACATTTTACTAATAAT
ATAAAAGCACGCTGATGGCACCTTGTAAAAAGAATTTACGGCGCAAAATA
TAGGCGGCAATAGTCATGTGCTGCCATATTGATTCATATCTATGATATGG
ATGGGATTTGCCATCGCCGATGTGTTGACCCCACCAGCGGTGGCGTAGAC
AGCCGTTTAAAGAAGCTCACTCATCTAATCGTGGATAATGGACTCTACTA
TTCTCGTAGAGAGAGCTAGAATTCGGCAAGATTCTCTAAATAACGATCGG
TAGGCACGGTAAAGCGTACCAGGATCACAGTGATAAAGCGCGTCTGTCAA
GGCCCCGTTGTCCAGACTAGAGCCTGCAAAGCTTGTGACGACTACATTTC
CAACGAATACAGCCTCGAAAAAGTAAAGTTGATCTGATTTAATCGTTTAG
TCCAGCAGTACTAACGTTGTACTGGAATGCTGAATTCCTCTCTCAACCCC
TTGATCCCCACGCGGTCGATGCTCTCAAGGCGGAACATGAGCACCAAGAA
GGACAAGAATGTGGCCAGTACTATCCCTGGCATGATCAAGGGCTTTGGGC
TGCGCCAGAAAGCACCCAACACGGGTAACACCGCCTTGGGTAAGGGGTTC
GACCTGATGGAAGATGACGTGGGCTCGCGAAAAAAAATCGTCATTGCAGG
GTAAGCGCACAAGCTTTGTAAGCAAAAAACTCGACACCGGCCACATGCAG
AGCGTACCATCGACGGAACCACCCACGTCCCAGTATTTCATTTTCAAGCG
CGGTTGCGCACGTTGAGGAAATAGTTGAACGATCGAATCTGCGACATATC
TATCCCTACATCTGGGTGGCTCGAGGCGGAAGTTTTTAATAACAAAACTA
CTCAGCGTCCAGCTTCAAAGAATCATGCATACACACCACCGGGACTTACT
CGCAATGCCCTAGATAATGTACCAGAAAACAGAGTAATTTGTGTCGTGTG
GTTAATGTATGAGCCAAGGACGAAGAGGCGCAGGAGGGGACGTGGTCGTG
TTCCGCACGCGGGGTTGTGCGCATTCGTTCCACTTCGGTGTCAATGCCGC
GAGAGCGTGATCGGAAGTCAGCAACCGCCGTTGCACTTTGTTTTACCACA
TCGTGATGCCAACGGAGACCACGTCAGACATCGTAGGAGTGCAGCTGGTC
GGAACAAAAAATGGAGGCCAGCTCAAAACAACAGCGTGCGCCGGGTCCAG
GCCAAAGCGTTTCCTGCATCCTGCTCTGCCGTTGTCCGGTGCCGTACCCC
GCCGCCGTGGATCCAACTCATATAGGTACGACCCACACGGCTTTCAGCTT
GGAGACGGCGTCGATGTGAGGGGATCTATGATTTGCTTTCCCAACTCTTT
CGTCTTGTGGGAACCTAAGCGGGCCAGGGACATCACCATGGAGAGTCTTC
ACCTCCTCGAGCTCGTGACACCGAAGATAGGTAGGCGCTGCGGCGTTAAT
CATGATTGCGGCTGAAGGTTTAGTGGTCACACTCCGTGGCATTTCCTTGA
ATAAGACGGAAAAACATCGTACCCAATGGAATTTATGTGGAACGCAGGCG
GTTGTAGTTCTGTGTCTCGTCTGTTGATAAAGGAAAGCATGCACGAACGA
AGATTGATGTGCTTTCCCACGGAAAGTAGCCCTCGTGCTCCGTCTAATGG
GATGTCTTGAAACGCTTCAAAGCTTGACTCCCCCGAGCGGACGCTCACCC
GAGTGTTTGTTTCACTTCAATGCAACGCAGATATTGCTATTATAGGAGTG
GGCGAGAGAATGACGGAGAGGCTTGATCCAAAGCTGGTGAAACACCTCAG
CTCGAAGCGGATAAGCGTGGAACAGATGGACACGGTGAGCAATTAAAAGC
GATACAGGTACCTTCAGGTAATGTATCCAAGCACGTGACACACCAGTATT
GCTGCGTACGACGGAATGGTTGTGGTAAACACATGACTTCGCGGGATGAA
TATAACGTCTAGAAAGTTGAAATCTGTGGTCTGGTCTGCGACCCGCGTCT
AAAATGGAGGTAACGAACAGCCGGCCAGCGATGGGGCTCAGATAGGCGTT
TTGATACACGCTATAACAGCCCAATACCGCGCTAAAAACAAAGTCAGGGT
GAAGTCGGACGCCGGTTCGTTTGTGTTAGTTCTCGGTCATAACTTCGAAC
TAAACAGCCTACGCCAAACGGGCGGTCTTGTGCACGTGTCCACTGCGACG
TTTTTTAAACCCAGGGAAGAATCGTATATTTGAGTCCTCTTTGCGGCATC
TCGACTCAATCGAAAGACATGTACAAGGTGTAAGAGGGTCCACCAAATCT
TCAGAGTGTAGGGCTTTTAATGGGCAAGTGCCTGCCTACCCTCATCAACG
CTTCCTTTTTGCGAATGCAACAGATCGCGCGGGTCTTATCCGTAACTTGT
CACATTTCGCCGCCTTATTTCAACAAAAACGCTTAAGAAAACGCGCTTGT
GCGTGATCAGTTATCCACGCCATTCGAGCGGTATGGAAAATTATATTGAT
AGTGTTTCCTCCTATTTCTTCTTGCGTCGAAATGGACGCAGGTAAACGCG
TGTTCTACGTTTAACGTTCTGAACGCGGAAGATCGAAGGGTTGCAGTGGC
TTTGCTCCAGCTATCCGAGACCAAGGAGGAAACCTAGAGCTCCCCCGCAC
GTCCACGATAACGCGCGCCTCATTTTACGACCACCCTCGGCCAAGTCGCA
TATCAGGTGTTGACATGATACATGTTGCTATCTAGACTGTATTTCGAACT
GCCTTGAGGATTGACCACCACAAGCGAGAGGCAAACCACGTGGTGATGCC
GGTAAAAACTGTTGGTGACTATTGAGTGTTTACCGGACAGTCAGCGGATC
GACGGGCAAGTACGCGAACTTTGGAAGTGCCTAGGCCCGTGATGCTGGTC
ATGTCTCGGGTAGATAGGATCTTTAGCGTGATCTCCTTGCCGAGGTAGGG
AAAATATCCGGTGCTTTCTAAAGTGCACGAAGCAGGGGGTGCGTTCTAGG
AACAATCGTATGCGACTTGGTCATCAAACCCTTACTGCAAGACGGACAAA
ACGGTAAGATGTTATGAATATATACCTACGTTCAACACAGTTAGCTGTTC
GCCGGAAAAACACGACAAAAAACAAGTGAAATATTAAAAGGCTTGAGACG
CGACCTGGGCGGGGAGAAAGCAAGAGGCTGTAAGCTCATTCATGAGGGGC
AAAGAAGTTGCCGACGACATCCTATGCTGACTGGTGGTAACCACGCTTAC
CGACGAGCAAACACGTTTGCGCATAGGACCCATCTGTTCAAAAGTAGCTC
TTAAACCACATGCCAGGTCGAGCGTCACGTCCAGATATATCTCCAAGCTA
CCCAGTTCGAAGGGAATGGTATTGTCGACGTACTCGATCAGAATCAATTA
TTTCGTTTCATCCGTCTTGGAGCAGGTGCGGATTGATGTAGTGACGGAGA
GCCACGAGCGATATTCATCATAGTGGATGGCGAGGGGGTGGGTCAGTACC
ATTTTCACCTCTCAACAATAATCTTGTGCTGCGACCCTAAATATTGGCAA
TATATATAGTGTCCATTATAAGAATAACTATTGCACAGTTCATGGGGGTT
CCAGAAGTAGCCTTTGTGAGTTTAGTGTTCATGACATAGAAACGTATCTA
CTAATCGTCCCTCTAATAGTGAGAGGAATCGTAATACTATCAAGAGGGGA
TCTGATAGTAGTATCCCGGAGGGATCGGGTGTTATTGCCCCGAGGGGATC
TCGTAGTACTACAGTATCTTTATGATTTGTCCTAGGCTACTTCTCCAAAA
TTCTTATTTCTAGTCTTTTCCGTACTGCCTTTGGCATGACAGTTTTATGA
TAAATGGTAAATATGTCATAAGTTCAACATAAACCCTTTCCCTCTGTGGG
TACATACGAACCCACAGGAGACCACTATTGGGACCTCGGCCAAGGAAGTT
CCAATATGTCGGTGCCCATTTCAGAGATATGCTGCAACAACGGCCACGCC
ACGCTAAAAATGCGCGAGCACAGGTGGAAACTGGGATTGGGGGTCTGAAC
GAAATGACTCAGGCGAGCGTGTGGGCAACGCCGTTACGGGTAGGGAAAAC
TGAGATAACCTATCTATACGGAAGGAGTGAGGCAAGCGTGTGGATGACCA
CCATGGATAGGGGAAGCTAGGATACCGTATCCGCAATCAAGAAGTCATAT
GAGCGTGTGGATGACGCCACCACGGATGAGGGGAACTAAGATGCCTTGTC
CACAACGAGTCAGGCAAGCGTGTGGACGACGCCGCCCAGGATGGGGGAAA
CTGGGCAACTCTATTTGCGCGGAAAAGGCATTCCCGCCAAGGGCACGTTT
TCCAATGGTGATCTCCTAGTGGAGGGTCTATATCTTGTTTCGATTTTAGT
CCCCCAGCCTTGGCGATTTGCTCTCCGAATTTCGTGTCGCCAATGTATTT
TCTGTGTCGGCTGCGCATGAGAAATTGGACAATTCTGTACATTGACATCG
AGAGTGAAAAAAATTGCTCACATAGACCCGCGAAAGACATGGGCAAGCTA
TGCCGTCTGTTCAGGTGCATGTTCTAGTGCACATTACATATGCACTCGTT
GCTTATCTTTACGGTTGACTTTCCAAGCCATTTGTTGCTCCGTTCGTCAG
TGAAAGAAAACGAGCATCAGAGGAGAGAAGACAATTCAATTATAGCGGAG
GATATTTCCAGTGGGGAATGAGCATGCAGCTTCGTAGCTGCCGATGAACG
TCCGACACAAGAGAGGGTTTCATGTGACCCGTGAAGGGGCGACCTTAGTG
CAGGCCTATCTAGCGGTGAAGATCTTGTATATTTTGTAGGAAGGGGTTCT
TCCAACCCACTCAATGTACCTTCAAGCCCAC
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Coding sequence (CDS) from alignment at H-elongata_contig1987:2386..7816-

>mRNA_H-elongata_contig1987.5570.1 ID=mRNA_H-elongata_contig1987.5570.1|Name=mRNA_H-elongata_contig1987.5570.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1596bp|location=Sequence derived from alignment at H-elongata_contig1987:2386..7816- (Himanthalia elongata Himel1 dioecious)
ATGGAAGCGTTACCGAGGCCCTTACTTCTCGCAACACGACCATGCGTGAG
AGCCAGGCGACTGTGGGCGTCTGGTCTGGGCGGCGGTGGTGTGGACCCAT
GTAGAGATATCTCTTCGTCAGCGACCACGCCGTTCGTTGAACAGACCAGT
GCTGCTCAGGGAGCGAGAACAGGGACGTCTCCCCCCTTGTCGCCTATTTC
TGTAGCATTATCGCCGTATGATAGGCGTTGCTCGGCACGGTTGCCTTTGT
TGGCTGCCGCAAATATCAGCAGATGGAAGCGTTACCGAGGCCCTTACTTC
TCGCAACACGACCATGCGTGAGAGCCAGGCGACTGTGGGCGTCTGGTCTG
GGCGGCGGTGGTGTGGACCCATGTAGAGATATCTCTTCGTCAGCGACCAC
GCCGTTCGTTGAACAGACCAGTGCTGCTCAGGGAGCGAGAACAGGGACGT
CTCCCCCCTTGTCGCCTATTTCTGTAGCATTATCGCCGTATGATAGGCGT
TGCTCGGCACGGTTGCCTTTGTTGGCTGCCGCAAATATCAGCAGGCGGAA
CATGAGCACCAAGAAGGACAAGAATGTGGCCAGTACTATCCCTGGCATGA
TCAAGGGCTTTGGGCTGCGCCAGAAAGCACCCAACACGGGTAACACCGCC
TTGGGTAAGGGGTTCGACCTGATGGAAGATGACGTGGGCTCGCGAAAAAA
AATCGTCATTGCAGGGCGGAACATGAGCACCAAGAAGGACAAGAATGTGG
CCAGTACTATCCCTGGCATGATCAAGGGCTTTGGGCTGCGCCAGAAAGCA
CCCAACACGGGTAACACCGCCTTGGGTAAGGGGTTCGACCTGATGGAAGA
TGACGTGGGCTCGCGAAAAAAAATCGTCATTGCAGGGTACGACCCACACG
GCTTTCAGCTTGGAGACGGCGTCGATGTGAGGGGATCTATGATTTGCTTT
CCCAACTCTTTCGTCTTGTGGGAACCTAAGCGGGCCAGGGACATCACCAT
GGAGAGTCTTCACCTCCTCGAGCTCGTGACACCGAAGATAGGTACGACCC
ACACGGCTTTCAGCTTGGAGACGGCGTCGATGTGAGGGGATCTATGATTT
GCTTTCCCAACTCTTTCGTCTTGTGGGAACCTAAGCGGGCCAGGGACATC
ACCATGGAGAGTCTTCACCTCCTCGAGCTCGTGACACCGAAGATAGATAT
TGCTATTATAGGAGTGGGCGAGAGAATGACGGAGAGGCTTGATCCAAAGC
TGGTGAAACACCTCAGCTCGAAGCGGATAAGCGTGGAACAGATGGACACG
ATATTGCTATTATAGGAGTGGGCGAGAGAATGACGGAGAGGCTTGATCCA
AAGCTGGTGAAACACCTCAGCTCGAAGCGGATAAGCGTGGAACAGATGGA
CACGGTAAACGCGTGTTCTACGTTTAACGTTCTGAACGCGGAAGATCGAA
GGGTTGCAGTGGCTTTGCTCCAGCTATCCGAGACCAAGGAGGAAACCTAG
GTAAACGCGTGTTCTACGTTTAACGTTCTGAACGCGGAAGATCGAAGGGT
TGCAGTGGCTTTGCTCCAGCTATCCGAGACCAAGGAGGAAACCTAG
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