mRNA_H-elongata_contig19809.5542.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A2G3AWW3_CAPCH (Rhodanese-like domain-containing protein 6 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AWW3_CAPCH) HSP 1 Score: 220 bits (560), Expect = 1.660e-61 Identity = 136/385 (35.32%), Postives = 184/385 (47.79%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTEVLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVR++ GVN T+GG ++ALE HI K + + EG DFKL+ P N +V++E GFT++S++ VKE+V++ +C +P +S G+H+S EFH++L Q D L+ S ++K T+L+D RN YET IG F +E LDP+ RQ+SDLP W+ N ++LRG +LMYCTGG+RCEMASA +R D V QL GGI+RYL+ +PD GFFRGKNFVFD RVSV + + G C+ C P+DDY +R+RC CRMLVLVCD C
Sbjct: 45 RVRLSPSGVNVTVGGKLSALEEHIAAVKLNSLF--EGTDFKLASCHEPSNDRVSMECGFTSLSIRIVKELVTLS----SCPLPRSPEIS----NAGKHLSAAEFHSVLHNVGNSQ-----------------DKLVPS-----------------------------------------SDKGTVLIDARNLYETRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIRSKGDGYEN-------VFQLYGGIQRYLEQFPDG------------------------------------------GFFRGKNFVFDHRVSVGS--SDSRIWGTCLLCSSPFDDYSSRTRCTYCRMLVLVCDNC 310
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A7J7D0Q1_TRIWF (Rhodanese domain-containing protein n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D0Q1_TRIWF) HSP 1 Score: 224 bits (570), Expect = 1.260e-60 Identity = 144/387 (37.21%), Postives = 192/387 (49.61%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAV-ENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVRVA GVN T+GG ++++ERHI KG+ + EG DFKL+ P N +VA E GFT++SV+ VKE+V+ +C + ++P +S GRH++ EFH++++ AE R+ ++ G + +E +LLD RN YET IG F + +E LDP+ RQ+SDLP W+ EN +RLRGK VLMYCTGG+RCEMASA +R S GA E V QL GGI+RYL+ +PD GFF+GKNFVFD R+SV A ++ G C+ C +DDY R RC CRMLVLVCD C
Sbjct: 49 RVRVAPHGVNVTVGGELSSVERHIAAVKGNSLF--EGTDFKLATCDYPLNEKVARECGFTSLSVRVVKELVTF-----SCHPLLKSPDIS----NAGRHLNAAEFHSVIESAE-------------------------------------------------RIMDKDGPTKA---------RELVLLDARNLYETRIGKFQSPNVETLDPRIRQYSDLPSWIDENSERLRGKHVLMYCTGGIRCEMASAYLR--------SKGAGFENVFQLFGGIQRYLEQFPDG------------------------------------------GFFKGKNFVFDHRISVGSSDA--DVKGTCLLCGLSFDDYSPRCRCSYCRMLVLVCDSC 314
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A5D2S2U1_GOSMU (Rhodanese domain-containing protein n=38 Tax=Malvoideae TaxID=214907 RepID=A0A5D2S2U1_GOSMU) HSP 1 Score: 222 bits (565), Expect = 1.490e-60 Identity = 141/386 (36.53%), Postives = 189/386 (48.96%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVR++ +GVN T+GG ++ALE+HIE K + + +G DFKL+ S P N +VAVE GFT++S++ VKE+V+ + + NP S GRH+S EFH++LQ A R+ + + +K+ +LLD RN YET IG F A +E LDP RQ+SDLP W+ +N + LRGK VLMYCTGG+RCEMASA +R S GA E V QL GGI+RYL+ +PD GFFRGKNFVFD R+SV + ++G C+ C +D+Y +R RC CR+LVLVCD C
Sbjct: 39 RVRLSPNGVNVTVGGLLSALEKHIEAVKSNSLF--QGTDFKLASSHHPLNDKVAVECGFTSLSIRVVKELVTF-----SSYPLLNPP---EVSNAGRHLSAAEFHSVLQSA----------------------------------------------------------RQLMKNGSPTDDKQLVLLDARNLYETRIGKFHAPSVETLDPGIRQYSDLPSWIDDNSELLRGKHVLMYCTGGIRCEMASAYIR--------SKGAGFENVFQLYGGIQRYLEQFPDG------------------------------------------GFFRGKNFVFDHRISVGS--SDTSIMGACLICGSSYDNYSSRCRCTHCRILVLVCDSC 304
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: UPI000B775A82 (rhodanese-like domain-containing protein 6 isoform X2 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B775A82) HSP 1 Score: 217 bits (552), Expect = 1.560e-60 Identity = 140/386 (36.27%), Postives = 189/386 (48.96%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVR++ +GVN T+GG++++LE+HI K + EG DFKL+ S P N +VA E GFT++S++ VKE+V+ + ++ P +S G H+S EFH++LQ A+ Q N+ +GG ++LD RN YET IG F +E LDP+ RQ+SDLP W+ +N ++LRGKRVLMYCTGG+RCEMASA +R S G E V QL GGI+RYL+ +PD GFF+GKNFVFD R+SV A ++G C+ C P+DDY +R RC CRMLVLVCD C
Sbjct: 47 RVRLSPNGVNVTVGGTLSSLEKHIAAVKSISLF--EGTDFKLASSHYPLNDEVARECGFTSLSIRIVKELVTFS----SHPLLKAPDIS----NAGTHLSALEFHSVLQSAQ---------------QCVENEGPTANGGL-------------------------------------------VVLDARNLYETRIGKFHMPNVETLDPEIRQYSDLPSWIDDNSEQLRGKRVLMYCTGGIRCEMASAYIR--------SRGVGFENVFQLFGGIQRYLEQFPDG------------------------------------------GFFKGKNFVFDHRISVGSSDAN--ILGTCLLCDMPFDDYSSRCRCSYCRMLVLVCDSC 312
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: UPI00098E15DE (rhodanese-like domain-containing protein 6 isoform X1 n=2 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E15DE) HSP 1 Score: 223 bits (568), Expect = 1.600e-60 Identity = 143/388 (36.86%), Postives = 189/388 (48.71%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGCLG 1167
RVRVA DGVN T+GG + ALE+HIE + + EG DFKL+ GP N ++A E GFT +SV+ VKE+V+ + ++ P +S + G+H+S EFH++LQ+A G + ++ A EK+ +LLD RN YET IG F +E LDP+ RQ+SDLP W+ E+ ++L+GK VLMYCTGG+RCEMASA +R S GA E V QL GGI+RYL+ +PD GFF+GKNFVFD RVSV ++G C+ C +DDY +R RC CRMLVLVC C G
Sbjct: 38 RVRVAPDGVNVTVGGKMPALEKHIEALRSDSLF--EGTDFKLASCDGPSNERIARECGFTDLSVRVVKELVTFR----SDPLLKPPEISHA----GKHLSATEFHSVLQDAAG---------------------------------------------------------KVSDSQASTQEKQLLLLDARNLYETRIGKFQNPDVETLDPEIRQYSDLPSWIDEHAEQLQGKNVLMYCTGGIRCEMASAYIR--------SKGAGYENVFQLYGGIQRYLEQFPDG------------------------------------------GFFKGKNFVFDHRVSVGSQDTN--ILGACLICGSSFDDYSSRCRCSYCRMLVLVCYSCQG 306
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A1S4CFD8_TOBAC (rhodanese-like domain-containing protein 6 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4CFD8_TOBAC) HSP 1 Score: 216 bits (551), Expect = 3.550e-60 Identity = 138/386 (35.75%), Postives = 186/386 (48.19%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVR++ +GVN T+GG ++ALE HI K + + EG DFKL+ P N +VA E GFT++S++ VKE+V++ +C ++P +S G+H+S EFH++L Q D L+ S + +L+D RN YET IG F +E LDP+ RQ+SDLP W+ N ++LRG +LMYCTGG+RCEMASA +R S GA E V QL GGI+RYL+ +PD GFF+GKNFVFD RVSV + ++G C+ C P+DDY +RSRC CRMLVLVCD C
Sbjct: 48 RVRLSPNGVNVTVGGKLSALEEHIVAVKLNSLF--EGTDFKLASCHEPSNDRVAKECGFTSLSIRIVKELVTLS----SCPLQKSPEIS----NAGKHLSAVEFHSVLHNIGNTQ-----------------DKLIPS-----------------------------------------SSNGIVLMDARNLYETRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIR--------SKGAGFENVFQLYGGIQRYLEQFPDG------------------------------------------GFFKGKNFVFDHRVSVGS--SDSRILGTCLLCNSPFDDYSSRSRCTYCRMLVLVCDNC 313
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A176WBI6_MARPO (Rhodanese domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WBI6_MARPO) HSP 1 Score: 224 bits (571), Expect = 3.910e-60 Identity = 145/387 (37.47%), Postives = 193/387 (49.87%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCA-DGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
R+RVA DG+N T+GG + AL+ HI + + G DFK++ S P N + A E GFT++S +AVKE+V++G+ +V+ PS+S GRH + +EFH ILQE RA A + DT L K+TI++D RN YET IG F A +G+E +DP RQ+SDLP W+ +N DRLR K++LMYCTGGVRCEMASA +R S G E V+QLSGGI+RY++A+PD G+F GKNFVFD R++VP ++G+C+ C P+DDY R RC CRMLVLVC C
Sbjct: 58 RIRVAPDGINITVGGKLTALQEHIRVVSSNPLFTG--TDFKIASCSPPANPKAAAECGFTSLSARAVKELVTLGLH----PSVQPPSVS----NAGRHATAQEFHKILQE----------RALGEAQEGS----------------DTSL-------------------------------KQTIVVDARNVYETRIGKFSAGEGVEVMDPMVRQYSDLPGWIDDNEDRLRNKQILMYCTGGVRCEMASAYIR--------SKGKEFEDVVQLSGGIQRYMEAFPDG------------------------------------------GYFVGKNFVFDHRLAVPSL--NKVVLGRCLQCNTPYDDYSARCRCSLCRMLVLVCSDC 325
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A4Y7J4R2_PAPSO (Rhodanese domain-containing protein n=4 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J4R2_PAPSO) HSP 1 Score: 222 bits (566), Expect = 6.670e-60 Identity = 142/385 (36.88%), Postives = 188/385 (48.83%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTEVLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVR+A DGVN T+GG +AALE+HIE K + + EG DFKL+ P N ++A E GFT++SV+ VKE+V++ + +E+P++S GRH+S EFH++L H + L S EG+ GG K ILLD RN YET IG F +E LDP+ RQ+SDLP W+ + ++L+GK VLMYCTGG+RCEMASA +R V QL GGI+RYL+ +PD GFF+GKNFVFD R+SV + ++VG C+ C +DDY +R RC CRMLVLVC C
Sbjct: 63 RVRIAPDGVNVTVGGKLAALEKHIEDVKLNSLF--EGTDFKLASCDSPSNEKIAKECGFTSLSVRVVKELVTLS----SQPLLESPTIS----NAGRHLSAAEFHSVL---------------------HSAGNNLES----------------EGQSGG---------------------KPLILLDARNVYETRIGKFKTSNVETLDPEIRQYSDLPSWIDSHAEQLQGKSVLMYCTGGIRCEMASAYIRSKGHGFEN-------VFQLYGGIQRYLEQFPDG------------------------------------------GFFKGKNFVFDHRISVGS--SSSDVVGLCLLCGLSFDDYSSRCRCTYCRMLVLVCGSC 328
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A5A7QJB4_STRAF (Rhodanese-like domain-containing protein 6 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QJB4_STRAF) HSP 1 Score: 221 bits (562), Expect = 1.340e-59 Identity = 141/386 (36.53%), Postives = 191/386 (49.48%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSPSRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTE-VLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVR++ GVN T+GG + ALE HIE K + + EG DFKL+ P N QVA E GFT++S++ VKE+V++ + +++P +S GRH+S EFH+ILQ AG+ + N+ G +K+ ILLD RN YET IG F ++ LDP+ RQ+SDLP W+ N ++LRG +LMYCTGG+RCEMASA +R S GA E V QL GGI+RY++ +PD GFF+GKNFVFD RVSV + +++G C+ C P+DDY +R RC CRMLVL+C+GC
Sbjct: 51 RVRLSSHGVNVTVGGRLRALEEHIEAVKSNALF--EGTDFKLASCLEPLNNQVAKECGFTSLSIRIVKELVTLS----SHPLLKSPEIS----NAGRHLSAAEFHSILQ--------------------------------------------------------SAGKCQDENS---GCDKKLILLDARNLYETRIGKFETSDVKTLDPEIRQYSDLPSWIDNNSEKLRGNDILMYCTGGIRCEMASAYIR--------SKGAGFENVFQLYGGIQRYMEQFPDG------------------------------------------GFFKGKNFVFDHRVSVGSLDS--KILGTCLLCGIPFDDYTSRCRCIHCRMLVLICEGC 315
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Match: A0A6G1BHN3_9ORYZ (Rhodanese domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1BHN3_9ORYZ) HSP 1 Score: 214 bits (544), Expect = 1.460e-59 Identity = 139/386 (36.01%), Postives = 182/386 (47.15%), Query Frame = 1
Query: 7 RVRVALDGVNCTLGGSVAALERHIEGAKGHGMIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSAVENPSLSFSP-SRRGRHVSPREFHTILQEAEGWQWKEKERAASTAAQTHRNDSLLRSGGAWTSEEDTELYWGGEGRGGGSRVPEEAGRRRYINTAAGGAEKETILLDVRNAYETSIGHFCADGIERLDPKTRQFSDLPKWVCENVDRLRGKRVLMYCTGGVRCEMASALVRQHCDAVPESTGAVTEVLQLSGGIERYLQAYPDSSELDPPSNGLAPEGSGERNGNFRRRRIRVQADGARKPDKEPRGFFRGKNFVFDERVSVPEFPAGGEMVGQCIACRCPWDDYGNRSRCGRCRMLVLVCDGC 1161
RVRV DGVN TLGG +AALE+H+ + + EG DFKL+ GP + +VA E GFT++SV+ VKE+V++ CS NPSL+ + GRH+S EFH++LQ G A SE E + E ++LD RN YET IG F + LDP+ RQ+SDLP W+ E+ ++LRGK +LMYCTGG+RCEMASA +R + V QL GGI+RYL+ +PD G+F GKNFVFD R+SV ++G C+ C +DDY +R RC CRMLVLVC C
Sbjct: 55 RVRVGPDGVNATLGGRMAALEKHVAEMSSNNLF--EGTDFKLASCEGPVDERVARECGFTSLSVRLVKELVTL------CS---NPSLATPQITCAGRHLSASEFHSVLQNV---------------------------GTALDSEAPAE-------------------------------KNEVVVLDARNVYETRIGKFHVPNVVTLDPEIRQYSDLPLWIDEHAEKLRGKSILMYCTGGIRCEMASAYIRSKGEGFEN-------VFQLYGGIQRYLEQFPDG------------------------------------------GYFEGKNFVFDHRISVGSLKEN--ILGTCLLCGSSFDDYSSRCRCRHCRMLVLVCSTC 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19809.5542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19809.5542.1 >prot_H-elongata_contig19809.5542.1 ID=prot_H-elongata_contig19809.5542.1|Name=mRNA_H-elongata_contig19809.5542.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=501bp MIRGEGIDFKLSVSSGPRNAQVAVETGFTTVSVKAVKEVVSIGVGIGACSback to top mRNA from alignment at H-elongata_contig19809:453..5475+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19809.5542.1 ID=mRNA_H-elongata_contig19809.5542.1|Name=mRNA_H-elongata_contig19809.5542.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5023bp|location=Sequence derived from alignment at H-elongata_contig19809:453..5475+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19809:453..5475+ >mRNA_H-elongata_contig19809.5542.1 ID=mRNA_H-elongata_contig19809.5542.1|Name=mRNA_H-elongata_contig19809.5542.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3006bp|location=Sequence derived from alignment at H-elongata_contig19809:453..5475+ (Himanthalia elongata Himel1 dioecious)back to top |