mRNA_H-elongata_contig197959.5537.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: D7G0V2_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V2_ECTSI) HSP 1 Score: 253 bits (645), Expect = 8.310e-83 Identity = 119/140 (85.00%), Postives = 130/140 (92.86%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHIL 420
QTNTTTILKEYYPGM RLMYG+VGGNYE DKH+S LQAAACELEEEAHLHEGTW+ LMK E VAGAGKYSTQ+F+ YLVVDP+VKG P+GLDDGEFIEY+RGVSLEEVRAMI+SGDMSV SGFAALMAI+KLRELGHI+
Sbjct: 128 QTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKDERTVAGAGKYSTQVFYSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRAMIHSGDMSVTSGFAALMAIEKLRELGHIM 267
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI) HSP 1 Score: 151 bits (382), Expect = 2.470e-43 Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELG 411
QTNT T++KE+ PG + + +G+V G YE +KH SPLQAA ELEEEAHL GTWHTL + ++ A KYS+ F+ +LVVDP V PK +DD EFIE RGVS++E M+ G++S++S F LM KLR+LG
Sbjct: 96 QTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLG 232
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.430e-31 Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEPD---KHSSPLQAAACELEEEAHLHEGTWHTLM------KSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
QT T T+++EY PG R++YG+ G E D H P QAA ELEEE HL GTWH L S KY+ PYLV+D PK DD E IE VR V+++EV +I SG+M+++ G+A L+AI+KLR+LG I
Sbjct: 147 QTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDLGEI 294
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A7S2RZZ7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZZ7_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.260e-30 Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = 1
Query: 4 TNTTTILKEYYPGMKRLMYGIVGGNYEPDKHSS-PLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
T T TI++EY PG +++ G+ G E DKH S PL AA ELEEE HL GTW+ L K +A KY PYLV+D P+ LD+ E IE V GV+++E++ MI SGDM+++ +A+L+A+ KL+ELG I
Sbjct: 76 TKTATIVREYNPGCHQVLGGLAAGLIEDDKHGSDPLIAARHELEEECHLGGGTWYQLTKPGVAIA-MDKYVQTRVTPYLVIDAHKIDNPRPLDEEEDIEIVGGVTVDEIKNMIESGDMNLVGSWASLLALQKLKELGEI 213
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A0G4H3V0_VITBC (Nudix hydrolase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3V0_VITBC) HSP 1 Score: 113 bits (282), Expect = 2.260e-28 Identity = 62/139 (44.60%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
Q TT +EYYPG + G V G YE KH SPL AA ELEEEAHL G W L+ V+ KYS QIF+ +L +DP+ +P+ LDD E I R V + V G +V + AAL+AI+KLRE+G +
Sbjct: 85 QKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLINERGVM-DYEKYSDQIFYAFLCLDPVHTDDPRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGEL 222
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A7S4PK06_GUITH (Hypothetical protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S4PK06_GUITH) HSP 1 Score: 113 bits (283), Expect = 2.010e-27 Identity = 62/139 (44.60%), Postives = 77/139 (55.40%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
+T T +++EY PG + G+ GG +E KH LQAA EL EEA L GTW L KYS HPYLV+D + PK DD E IE +GV+LEE R + GDM + L+AIDKLR+LGHI
Sbjct: 226 RTKTCWLIREYCPGTHSIQSGVPGGLFEEKKHKDLLQAARDELNEEAGLMGGTWIALAPEG---IPQDKYSRNRLHPYLVIDCMRDPNPKPKDDDEIIEVEQGVALEEARRRVLEGDMPAPAAMVTLLAIDKLRQLGHI 361
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A6U2S3A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3A3_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.180e-27 Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEPDKHS-SPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
+T T T+++EY PG + ++G+ G E DKH P AA ELEEE HL G W+ L ++ KY YLV+DP P+ LD E IE + GVS+ E+ MI SG M+++ G+A ++AI+KLRELG I
Sbjct: 88 KTKTATLVREYNPGCHKSLHGVAAGLIEEDKHQCDPEIAARHELEEECHLQGGRWYRLT-ADGATVPMDKYVVTEIAAYLVIDPETVSNPRPLDAEEDIEIISGVSVPEIFDMIRSGGMNLVGGWACMLAIEKLRELGEI 226
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH) HSP 1 Score: 107 bits (268), Expect = 5.490e-27 Identity = 57/136 (41.91%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 10 TTTILKEYYPGMKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVD--PIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELG 411
TTT++KEY+PG ++M G V G E +KH+S LQAA ELEEEAHL W++L+ +E + KYS F PYL +D P+ +P LDD E+I R V+ E+ ++ SG ++V+S + ++ + KL++LG
Sbjct: 31 TTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLL-NEGAIMPFDKYSNNRFIPYLALDCEPVKSAKP--LDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLG 163
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: A0A7S1BIB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIB0_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.400e-26 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 1 QTNTTTILKEYYPGMKRLMYGIVGGNYEP-DKHSS--PLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDP----IVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
+T T T++KEY PG R++ G+ G E DKH P+ A ELEEE HL G W++L++ +D KYS F YLV+D + + LDD E IE + GVS+ ++ MI G+M+++ G+ L+A++KLRELG I
Sbjct: 161 RTKTATLIKEYNPGCMRIITGVAAGIIESGDKHDGGDPMVAGRFELEEECHLRNGRWYSLLE-DDTTVPHDKYSVTEFSAYLVLDADTIDSASEDVRALDDEEDIEIIHGVSVPKILEMIRKGEMNLVGGWTCLLALEKLRELGEI 305
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Match: L1JN07_GUITC (Nudix hydrolase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JN07_GUITC) HSP 1 Score: 101 bits (252), Expect = 4.920e-24 Identity = 56/125 (44.80%), Postives = 69/125 (55.20%), Query Frame = 1
Query: 43 MKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHEGTWHTLMKSEDVVAGAGKYSTQIFHPYLVVDPIVKGEPKGLDDGEFIEYVRGVSLEEVRAMIYSGDMSVISGFAALMAIDKLRELGHI 417
++ + G+ GG +E KH LQAA EL EEA L GTW L KYS HPYLV+D + PK DD E IE +GV+LEE R + GDM + L+AIDKLR+LGHI
Sbjct: 97 IREIQSGVPGGLFEEKKHKDLLQAARDELNEEAGLMGGTWIALAPEG---IPQDKYSRNRLHPYLVIDCMRDPNPKPKDDDEIIEVEQGVALEEARRRVLEGDMPAPAAMVTLLAIDKLRQLGHI 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197959.5537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig197959.5537.1 >prot_H-elongata_contig197959.5537.1 ID=prot_H-elongata_contig197959.5537.1|Name=mRNA_H-elongata_contig197959.5537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp QTNTTTILKEYYPGMKRLMYGIVGGNYEPDKHSSPLQAAACELEEEAHLHback to top mRNA from alignment at H-elongata_contig197959:125..1047- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig197959.5537.1 ID=mRNA_H-elongata_contig197959.5537.1|Name=mRNA_H-elongata_contig197959.5537.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=923bp|location=Sequence derived from alignment at H-elongata_contig197959:125..1047- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig197959:125..1047- >mRNA_H-elongata_contig197959.5537.1 ID=mRNA_H-elongata_contig197959.5537.1|Name=mRNA_H-elongata_contig197959.5537.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at H-elongata_contig197959:125..1047- (Himanthalia elongata Himel1 dioecious)back to top |