mRNA_H-elongata_contig19749.5513.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19749.5513.1
Unique NamemRNA_H-elongata_contig19749.5513.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 3.980e-93
Identity = 167/325 (51.38%), Postives = 234/325 (72.00%), Query Frame = 1
Query:    1 DVYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDE-VDRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSLINGQVEDPWPRSRPPRIFVTTRSASVA 972
            DVY+RFLD +D+ NFD+SW++SAGC   +DFHD+LL  T+ P+  +  L+GT+  A    R   E+L ++ +KHVS++LL+ FL+YSSVS+ +F+ F CE L+DG +YLRADYTI+CDS KH+A ++YAGFM+++Y +GIPA +A++LF++RHVL D   DR  +      SDLWKPY+PS FYYEV+EC RR++L GV++ +  ++AAQIA+TL++AF F M+SEGLAP+ SK DAW+ R G+ VV  SMY ALLLKV+VS E   SQR +E+VL+  H  MIL V+ E  V  +SL   Q ++P  R R  ++F + R    A
Sbjct:  939 DVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGKLFRSGRGLESA 1263          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 1.040e-88
Identity = 165/298 (55.37%), Postives = 218/298 (73.15%), Query Frame = 1
Query:    4 VYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDEVDRNDSLSVRWIS--DLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSL 891
            VYQ FL+ +++ NFD+SWM+SAGC V VDFHD+LL+ T+GPIF   +L  T+  A R +R + E L  VRHKHV ++LL+ F VYSSVS+ +F+TF CE L+DGK YL ADY IECDS KH+  E+YAGFM+LLY  GIPA ++++LF++R VL         L  R  S  DLWKPY+PS FYYEVVEC RR++L GV++ +  +S+AQIA+TLI+AF F +ISEGLAPY S+ D W+ R+G+ VVV+SMY ALLLKV+VS E  +SQ  FE VL+  HVVM+++ + E  V   +L
Sbjct: 1295 VYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALAL 1592          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 1.630e-88
Identity = 163/309 (52.75%), Postives = 222/309 (71.84%), Query Frame = 1
Query:    1 DVYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDEVD-RNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSLINGQVEDPWPR 924
            DVYQRFL+ +D+ NFDISW++SAGC + +DFHD+LLL T+GPI  +  L+ T+   SR  R +   L +V  +HVS++LL++FLVYS VSSVVFQTF C+ L+ G +YLRADY IECDS KH+   +YAGFMILLYP+GIPAF+  +L ++R VL  + D R D   V  IS+LW+PYRPS +YYEV+EC RRI+LTG+++ +  ++AAQIA+TLI+  +F ++SE L PY    D WV R+ + VV  S+Y ALLLKV+VSNE  +SQ+ FE VL+  H  MIL V++E  + G      + ++P PR
Sbjct:  700 DVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPR 1008          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 2.000e-88
Identity = 162/306 (52.94%), Postives = 224/306 (73.20%), Query Frame = 1
Query:    1 DVYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDE-VDRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSLINGQVEDP 915
            DVYQRFLD + + NFD+SW++SAGC VVVDFHD+LL+ T+GPI  +  L  T+  A+R  R + E L ++ ++HVS++LL+   VYSSVSS +FQTF CE L DG+ YLRADY I CDS KH+AL++YAG M+++Y +GIPA +  +LF++R VL     DR ++  V   S+LWKPY+PS FYYEV+EC RR++L GV++ +  ++A QIA+TL++AF F ++SEGLAPY S+ D W+ R+G+ VV  SMY ALLLKV+VSNE   SQR FEVVL+  H  MIL++++E  V   +L  G+ + P
Sbjct: 1750 DVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGP 2055          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 1.070e-87
Identity = 160/298 (53.69%), Postives = 228/298 (76.51%), Query Frame = 1
Query:    1 DVYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDE-VDRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSL 891
            DVYQ  LD++D+ NFD+SW++SAGC V ++FH +LL+ T+ PI  + +L+ T+  A+R  R   E L I+ +KHV+++LL+ F VYSSVSS +F+ F C+ LD  KDYLRADY+IEC+S +HR +++YAGFMI++Y +GIPA +A +LFK+R VL DE  DR +   V+ IS+LW+PY+P+ FYYEV+EC RR++L GV++ +  ++AAQIAVTL++AF F ++SEGLAPY S+ D W+ R+G+ VV  SMY ALLLKV+VS+E  +SQ  FE VL+ +HV MIL V++EA+V  +SL
Sbjct: 1195 DVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSL 1492          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.550e-87
Identity = 162/297 (54.55%), Postives = 215/297 (72.39%), Query Frame = 1
Query:    4 VYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLM-DEVDRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSL 891
            VYQRFLD +++ NFD+ W++SAGC   VDFHD+LL+ T+ PI  +  L+  +  A+R    S E L  V HKHVS++LL+ FLVY+SVS+V+FQTF CE LDD K+YLRADY IECDS KH A ++YAGFMI+LY +GIPA +   LF++  VL  DE DR     +   +DLWKPYRPS FYYEV+EC RR++L GV++ +  ++AAQIAV L++A +F MISE LAPY S+ D W+ R+G+ VV  SMY ALLLKV+VS+E  +SQR FE +L+  HV M+ +V+LE  +   SL
Sbjct:  661 VYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISL 957          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 6.210e-87
Identity = 157/294 (53.40%), Postives = 220/294 (74.83%), Query Frame = 1
Query:    4 VYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLM-DEVDRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTG 882
            VYQ+FLD + +  FD+ W++SAGC + + FH +LL  T+GPIF + +L+GT+  A+R  R + E L I+  KHV + LL+ FLVYSSVSS +F+TF C+ L+DGK+YLR DY IECDS KH+  ++YAGFMILLYPLGIP  ++ +LFK+R VL  D+ DR+DS  V+  S+LW+PY+PS FYYEV+EC RRI+LTG+++ +  ++AAQ+A+TL++AF F ++SE ++PY S+ + WV R+G+ VV  SMY ALLLKV+VS+E   SQ  FE VL+T+H  MIL V++E  V  
Sbjct: 1111 VYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 8.310e-87
Identity = 164/309 (53.07%), Postives = 223/309 (72.17%), Query Frame = 1
Query:    1 DVYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDEVD-RNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYSLINGQVEDPWPR 924
            DVYQR L+ +D+ NFDISW+ISAGC + +DFHD+LLL T+GPI  +  L+ T+   SR  R +   L +V  +HVS++LL++F+VYSSVSSVVFQTF C+ L+ G +YLRADY IECDS KH+   +YAGFMILLYP+GIPAF+  +LF++R VL  + D R D   V  IS+LW+PYRPS +YYEV+EC RRI+LTG+++ +  ++AAQIA+TLI+  +F ++SE L PY    D WV R+ + VV  S+Y ALLLKV+VSNE  +SQ+ FE VL+  H  MIL V++E  + G      + ++P PR
Sbjct: 2438 DVYQRLLNGLDVFNFDISWIISAGCVMNLDFHDRLLLSTIGPIMALLCLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPR 2746          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.500e-84
Identity = 154/294 (52.38%), Postives = 218/294 (74.15%), Query Frame = 1
Query:    4 VYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLM-DEVDRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTG 882
            VYQ+F+D + +  FD+ W++S GC + +DFH +LL  T+GPIF + +L+GT+  A+R  R + E L I+  KHV + LL+ FLVYSSVSS +F+TF C+ L+DG  YLR DY IECDS KH+  ++YAGFMILLYPLGIP  ++ +LF++R VL  D+ DRNDS  V+  S+LW+PY+PS FYYEV+EC RR++LTG+I+ +  ++AAQ+A+TL++AF F ++SE ++PY S+ + WV R+G+ VV  S+Y ALLLKV+VS+E   SQ  FE VL+T+H  MIL V++E  V  
Sbjct: 1171 VYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1463          
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 6.790e-83
Identity = 161/298 (54.03%), Postives = 216/298 (72.48%), Query Frame = 1
Query:    1 DVYQRFLDIVDMLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYRASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRADYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDEV--DRNDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIAVTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVSNETQTSQRAFEVVLITIHVVMILIVILEASVTGYS 888
            DVYQRFLD V++LNFD+ W+ SAGC V VDFH +LL+ T+GP+  + +L+ T+  A RR   S  AL  +RHKH+S++LL+ FLVYSSVS+ VFQ+F CE LDD K YLRADY IECDS +H+A +++AG MIL+YP+GIP F+ Y+L+K+R VL  E    R  S  V+ ISDLW PY+P RFYYEV+EC RR+ LTGV++ +  ++AAQ+AVTL++AF F + S  LAPY SK DA +  +G+ +V +SMY ALL KV+VS+E   SQ  F  VL+  H  M++ V++E  V  YS
Sbjct: 1458 DVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19749.5513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI3.980e-9351.38Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LSC0_ECTSI1.040e-8855.37Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7FHH1_ECTSI1.630e-8852.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI2.000e-8852.94Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K0E9_9PHAE1.070e-8753.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2Z8_ECTSI1.550e-8754.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2X5_ECTSI6.210e-8753.40Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FHG7_ECTSI8.310e-8753.07LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K7Z1_9PHAE1.500e-8452.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY65_9PHAE6.790e-8354.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19749contigH-elongata_contig19749:1662..4220 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.3
Seed ortholog evalue2e-84
Seed eggNOG ortholog2880.D7G301
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons2
Model size2525
Cds size954
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19749.5513.1prot_H-elongata_contig19749.5513.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19749 1695..2648 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930116.595233-UTR-H-elongata_contig19749:1661..16941622930116.595233-UTR-H-elongata_contig19749:1661..1694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19749 1662..1694 +
1691679286.9342408-UTR-H-elongata_contig19749:1661..16941691679286.9342408-UTR-H-elongata_contig19749:1661..1694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19749 1662..1694 +
1622930116.632025-UTR-H-elongata_contig19749:2648..39131622930116.632025-UTR-H-elongata_contig19749:2648..3913Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19749 2649..3913 +
1691679286.953076-UTR-H-elongata_contig19749:2648..39131691679286.953076-UTR-H-elongata_contig19749:2648..3913Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19749 2649..3913 +
1622930116.6484241-UTR-H-elongata_contig19749:3947..42201622930116.6484241-UTR-H-elongata_contig19749:3947..4220Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19749 3948..4220 +
1691679286.962511-UTR-H-elongata_contig19749:3947..42201691679286.962511-UTR-H-elongata_contig19749:3947..4220Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19749 3948..4220 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930116.6165345-CDS-H-elongata_contig19749:1694..26481622930116.6165345-CDS-H-elongata_contig19749:1694..2648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19749 1695..2648 +
1691679286.943918-CDS-H-elongata_contig19749:1694..26481691679286.943918-CDS-H-elongata_contig19749:1694..2648Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19749 1695..2648 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19749.5513.1

>prot_H-elongata_contig19749.5513.1 ID=prot_H-elongata_contig19749.5513.1|Name=mRNA_H-elongata_contig19749.5513.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=318bp
MLNFDISWMISAGCFVVVDFHDKLLLLTLGPIFIMFVLSGTFNYASRRYR
ASLEALYIVRHKHVSIMLLVLFLVYSSVSSVVFQTFDCEFLDDGKDYLRA
DYTIECDSQKHRALEIYAGFMILLYPLGIPAFFAYVLFKNRHVLMDEVDR
NDSLSVRWISDLWKPYRPSRFYYEVVECCRRIVLTGVILLVDDDSAAQIA
VTLILAFIFTMISEGLAPYESKTDAWVGRLGNGVVVSSMYYALLLKVNVS
NETQTSQRAFEVVLITIHVVMILIVILEASVTGYSLINGQVEDPWPRSRP
PRIFVTTRSASVASLAT*
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mRNA from alignment at H-elongata_contig19749:1662..4220+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19749.5513.1 ID=mRNA_H-elongata_contig19749.5513.1|Name=mRNA_H-elongata_contig19749.5513.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2559bp|location=Sequence derived from alignment at H-elongata_contig19749:1662..4220+ (Himanthalia elongata Himel1 dioecious)
GATGTATATCAGAGGTTCCTGGACATCGTGGATATGCTTAATTTTGATAT TTCGTGGATGATCTCGGCGGGGTGCTTTGTCGTCGTGGACTTCCACGACA AGCTTCTACTGTTGACACTTGGGCCGATCTTTATCATGTTTGTCCTTAGC GGCACCTTTAACTACGCCAGTCGCAGATATCGCGCTTCACTGGAGGCCCT TTACATTGTTCGTCACAAGCACGTATCTATAATGCTCTTGGTACTGTTTC TTGTGTACTCTAGCGTCAGCTCTGTGGTTTTCCAGACTTTCGACTGCGAG TTCCTCGACGATGGTAAGGATTACCTTCGCGCAGACTACACAATCGAATG TGACAGCCAAAAGCACAGAGCTCTAGAGATATATGCAGGGTTCATGATCC TACTATATCCACTTGGGATTCCTGCATTTTTCGCATACGTTCTATTTAAA AATCGGCACGTGTTAATGGACGAAGTAGACCGAAATGATTCCTTGAGTGT TAGGTGGATCTCCGATTTGTGGAAACCGTACAGGCCGTCGCGGTTCTACT ATGAGGTCGTCGAGTGCTGTCGGCGAATTGTGCTCACGGGAGTAATCCTG CTTGTTGATGATGACTCGGCCGCCCAGATTGCGGTGACGTTAATCCTCGC ATTCATCTTCACGATGATATCGGAGGGCTTAGCACCATATGAGTCGAAAA CAGACGCTTGGGTAGGTCGGCTGGGTAACGGTGTGGTGGTTTCTAGCATG TATTATGCACTATTGTTGAAAGTTAATGTTTCGAACGAGACCCAAACCAG CCAGAGGGCGTTCGAGGTTGTTCTGATCACCATCCACGTTGTAATGATTC TTATAGTGATCTTGGAGGCTAGTGTGACGGGATACTCACTGATAAACGGG CAGGTGGAAGACCCATGGCCAAGGTCCCGACCGCCAAGGATTTTCGTGAC CACTCGGTCCGCAAGTGTGGCATCTCTAGCAACCTGAGAATAAACAAATT GCGATGAGATACTTTTTTCTCGAGCCCAGCCAACCAGACCGCTATGATAA ATTTTTCTTTTCGCGAAACAGGTAGTCTTTGTCGGCTGAGATATTTTTGC TTATATAAGGACTGCAGACTGTGTGTACCTCTGGAAGCAGCAATATACGT TGCGTTTGCGCCTGTTGACCTCGACGGACAGGTCGGCGTTATATGTACTA GTACGTGTAAATAAGAAGGAAAAAATATAGTGGGCCTCCTGCAACTGATT TATACGTTTGGTTATTATGGTTCTACAGATGCGATCGCTGCTGTGCCTGC TTAGAGTTCATCCTTGCTGCTGACAGTTTTGATTCAGGTTTAAATGGTTC TAAAATGTGATCCCTAGTATACGAAGCTTTACGTATGCTGGCATATTAGA TGCTGATATGGAGCAAGTCGCTGGTCATTAAACTTAATGGTGACTTTTTC GTAGTAATCTTGGATGCAGGAGGCACACTTATTCGATGTGGGTATTCCGG CTTCAGATAATTTATTGCAGAGTAAATGTAGCTCTGTTACTCCTAGATAT ATTGATAGAGCTTCCGGTACATCATTTTATTTGCCCCACTTGAACCCACC ATTACGGCTCATGTCTACGCGCAGCCTAAAAGATGCAATATTCAAACTTT TTTCTGGTCGACGCATTGTTCTTACAACGCGATACTCTTTCTCAAGAGGC GGTTGATTTGGTTAAAAGGTAGACGTGAGGGATTTAGGCTTGACGTTTAA CGAGGGGATATTAAAGGGTGAGGCAGGGTTTAACTTAGGCGGAAATATCT TGGGGTCTGCGAGGTTCTAATACCGGGTCTGTAGGTGTTAGACGGGATCC CGGCTCCCCCAAAACGTTGCTCGGCTAAGCATATTAAATATTTATTAGGG TGTAATTTTCGGTAGTATTTTACGCCGTAGATATATGCCGCTTGACCACA TCCGAATCATGACCACACGTAGTAGTAGGTATATTTGGGACTTGAACTAT TTTTTCGTCCGGATCCTTCCTTTTTTTTCCCTTCCTAGTTTACATTTTTT TTGCCTCTGGGGAATATTTTTTTGCTTAGTTTTTTTTCGAGCTAAACATA TAATTTCCTCAGCGCTAGCTATTTAAGTGGGCGTGGTGTTTACTGTTTGT TACTGAGTGCAAGAGACACCATGTGTATTTAATTTTATGGGGCCTTATGT TAAATATATACTCGGTGTAAAAGTAGTTTATTGGTGTATCCATGTCATTT GTTTTTGAATAATTTTGTTAGACGTTTTTTGTTTTGTCCTCTCGGCTTGC TCTGCTGCCTTTCCTACCCTTTTTGTACACACTATACATATATCACCAGA GCATGGATCAACATGATTTGGTACGGTTTTCTTCTTCTTGTAGTCACCTG AACACGGAAATCTTTTATTTATGTCTCCGTTCGCGCCTAGGAGTTTGGTC TTGCGGTACGGGTTTAGTCGTCTCGTCCGAGGCTGAAAAGTCTGGTCCGT ATTCTCTGGATTTTCTCGATACTCTCGCTTTCTACGCCGGCGTCCATGCC TACCGTCAC
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Coding sequence (CDS) from alignment at H-elongata_contig19749:1662..4220+

>mRNA_H-elongata_contig19749.5513.1 ID=mRNA_H-elongata_contig19749.5513.1|Name=mRNA_H-elongata_contig19749.5513.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1908bp|location=Sequence derived from alignment at H-elongata_contig19749:1662..4220+ (Himanthalia elongata Himel1 dioecious)
ATGCTTAATTTTGATATTTCGTGGATGATCTCGGCGGGGTGCTTTGTCGT
CGTGGACTTCCACGACAAGCTTCTACTGTTGACACTTGGGCCGATCTTTA
TCATGTTTGTCCTTAGCGGCACCTTTAACTACGCCAGTCGCAGATATCGC
GCTTCACTGGAGGCCCTTTACATTGTTCGTCACAAGCACGTATCTATAAT
GCTCTTGGTACTGTTTCTTGTGTACTCTAGCGTCAGCTCTGTGGTTTTCC
AGACTTTCGACTGCGAGTTCCTCGACGATGGTAAGGATTACCTTCGCGCA
GACTACACAATCGAATGTGACAGCCAAAAGCACAGAGCTCTAGAGATATA
TGCAGGGTTCATGATCCTACTATATCCACTTGGGATTCCTGCATTTTTCG
CATACGTTCTATTTAAAAATCGGCACGTGTTAATGGACGAAGTAGACCGA
AATGATTCCTTGAGTGTTAGGTGGATCTCCGATTTGTGGAAACCGTACAG
GCCGTCGCGGTTCTACTATGAGGTCGTCGAGTGCTGTCGGCGAATTGTGC
TCACGGGAGTAATCCTGCTTGTTGATGATGACTCGGCCGCCCAGATTGCG
GTGACGTTAATCCTCGCATTCATCTTCACGATGATATCGGAGGGCTTAGC
ACCATATGAGTCGAAAACAGACGCTTGGGTAGGTCGGCTGGGTAACGGTG
TGGTGGTTTCTAGCATGTATTATGCACTATTGTTGAAAGTTAATGTTTCG
AACGAGACCCAAACCAGCCAGAGGGCGTTCGAGGTTGTTCTGATCACCAT
CCACGTTGTAATGATTCTTATAGTGATCTTGGAGGCTAGTGTGACGGGAT
ACTCACTGATAAACGGGCAGGTGGAAGACCCATGGCCAAGGTCCCGACCG
CCAAGGATTTTCGTGACCACTCGGTCCGCAAGTGTGGCATCTCTAGCAAC
CTGAATGCTTAATTTTGATATTTCGTGGATGATCTCGGCGGGGTGCTTTG
TCGTCGTGGACTTCCACGACAAGCTTCTACTGTTGACACTTGGGCCGATC
TTTATCATGTTTGTCCTTAGCGGCACCTTTAACTACGCCAGTCGCAGATA
TCGCGCTTCACTGGAGGCCCTTTACATTGTTCGTCACAAGCACGTATCTA
TAATGCTCTTGGTACTGTTTCTTGTGTACTCTAGCGTCAGCTCTGTGGTT
TTCCAGACTTTCGACTGCGAGTTCCTCGACGATGGTAAGGATTACCTTCG
CGCAGACTACACAATCGAATGTGACAGCCAAAAGCACAGAGCTCTAGAGA
TATATGCAGGGTTCATGATCCTACTATATCCACTTGGGATTCCTGCATTT
TTCGCATACGTTCTATTTAAAAATCGGCACGTGTTAATGGACGAAGTAGA
CCGAAATGATTCCTTGAGTGTTAGGTGGATCTCCGATTTGTGGAAACCGT
ACAGGCCGTCGCGGTTCTACTATGAGGTCGTCGAGTGCTGTCGGCGAATT
GTGCTCACGGGAGTAATCCTGCTTGTTGATGATGACTCGGCCGCCCAGAT
TGCGGTGACGTTAATCCTCGCATTCATCTTCACGATGATATCGGAGGGCT
TAGCACCATATGAGTCGAAAACAGACGCTTGGGTAGGTCGGCTGGGTAAC
GGTGTGGTGGTTTCTAGCATGTATTATGCACTATTGTTGAAAGTTAATGT
TTCGAACGAGACCCAAACCAGCCAGAGGGCGTTCGAGGTTGTTCTGATCA
CCATCCACGTTGTAATGATTCTTATAGTGATCTTGGAGGCTAGTGTGACG
GGATACTCACTGATAAACGGGCAGGTGGAAGACCCATGGCCAAGGTCCCG
ACCGCCAAGGATTTTCGTGACCACTCGGTCCGCAAGTGTGGCATCTCTAG
CAACCTGA
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