mRNA_H-elongata_contig197.5492.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A7S1U7W8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7W8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.510e-18 Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 49 ETHPNRGEQCLFATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVRSRVLE 390
E + + +F C A VI V S+YVRR RLPEP E++FCT TT+EELEL +RRF R+ + IF IAD+H+L Y+ Q +L++ +RSR+ E
Sbjct: 92 EDESSNNQLPVFVACCDAPAAVIPTVFSVYVRRRRLPEPSEILFCTSATTAEELELLLRRFLGARRHRRA--------------DHIFCIADLHKLSYTQQCLLVDMLRSRLHE 191
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A7S3YB00_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YB00_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 5.970e-17 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 79 LFATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVR 375
++ CA + VI VVLS++VRR RLPEPGE++FC T+ E+++L RF + +K N G+ +F +ADVH L Y+ Q +L+ +R
Sbjct: 9 IYVACAKSPQHVIEVVLSVFVRRSRLPEPGEILFCNERTSVEDIDLLFYRFLNAKKHNRGHF--------------VFTVADVHALTYTQQVAVLDRLR 93
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A7S0H307_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H307_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 1.570e-16 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 79 LFATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVRSRV 384
++ TCA + V VVLS+YVRRGRLPEPGE++FC+ +TT E++EL RF RK S + +F +AD+H LDY Q ++ +R +
Sbjct: 763 IWVTCADSPGAVFEVVLSVYVRRGRLPEPGEILFCSQSTTIEDIELLFYRFLSARK--------------SGFQDSVFCVADLHNLDYGMQVGVVARMREMI 850
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A7S0DLQ4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLQ4_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 7.370e-16 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 46 DETHPNRGEQCL--FATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVR 375
+E GE+ L + CA + VI VVLS+YVRR RLPEPGE++FCT +TT EE+EL RF + G+ +F +ADVH L+Y+ Q +L+ +R
Sbjct: 347 EEEEKATGEKRLPVYVACAKSPQHVIEVVLSVYVRRCRLPEPGEILFCTSDTTLEEIELLFYRFLAAKLHGRGHF--------------VFCVADVHALNYTKQVAVLDKLR 444
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A7S0DVA6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DVA6_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 7.650e-16 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 79 LFATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVRSRVLE 390
+F TCA + + VI VVLS+Y RRGR+PEP E++FC+ TT EE+EL RF ++ G+ +F +AD+H L Y+ Q +L +R + +
Sbjct: 1828 VFVTCAESAEAVIEVVLSVYARRGRIPEPSEILFCSSQTTLEEIELIFYRFISAKRHARGHY--------------VFTVADIHALPYTYQVSVLEKLREMLAD 1917
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A0L0DUC3_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DUC3_THETB) HSP 1 Score: 70.9 bits (172), Expect = 1.140e-11 Identity = 44/128 (34.38%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 37 PYPDETHPNRGEQCLFAT--------CATAED--EVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVRSRVLE 390
P PD T +R + + A ATA+ VI VVLS+Y RRGRLPEP E+IFCT T E++ L +RRF A ++ +AD+H L Y+ Q +++ + S + E
Sbjct: 1483 PPPDATVEHRADMLVKAAESRTLPVWVATADSPSRVIDVVLSVYARRGRLPEPDEIIFCTSTTRLEDVTLLLRRFV--------------AAAAHGRASALYTLADIHALSYTLQCAIVDALHSLLAE 1596
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A8J2AKF1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2AKF1_9DINO) HSP 1 Score: 61.2 bits (147), Expect = 2.660e-8 Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 79 LFATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRR 243
+FA E++V+ +VLS+Y RR RLPEP EV+ CT T EE+E+ +RRF R
Sbjct: 2764 IFACTTPKEEDVVGLVLSLYFRRERLPEPQEVLLCTETTQVEEIEILIRRFIQAR 2818
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A433PRH5_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PRH5_9FUNG) HSP 1 Score: 55.5 bits (132), Expect = 2.500e-6 Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = 1
Query: 112 VIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRR--FADRRKRNEGYNPTSTTTAPSSCDEGIFVIADVHRLDYSSQAMLLNHVR 375
V V+LS+Y G +PEP +++ C+P TT+EEL+L +RR FA +K N +F I +V L Y Q L+ +R
Sbjct: 242 VPNVLLSLYANHGTVPEPSQILLCSPTTTTEELDLLLRRCFFASSQKFGGHANQ-------------LFCIGNVQNLSYERQLTLVRSIR 318
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Match: A0A433DMA4_9FUNG (HTH araC/xylS-type domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DMA4_9FUNG) HSP 1 Score: 54.7 bits (130), Expect = 5.100e-6 Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 79 LFATCATAEDEVIRVVLSIYVRRGRLPEPGEVIFCTPNTTSEELELTVRRFADRRKRNEGYNPTSTTTAPSSCDEG-IFVIADVHRLDYSSQAMLLNHVR 375
LF V V++S+YV G +PEP +++ CTP+TT EEL+L ++R ++ +G +F IA V L + +Q++L+ +R
Sbjct: 1531 LFVAVCNDRGLVPNVIISLYVNNGHVPEPSQLLLCTPSTTEEELDLLLKRCT-----------WASCQKNQLAGKGQLFCIAGVQYLPFETQSILVRKIR 1619 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197.5492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig197.5492.1 >prot_H-elongata_contig197.5492.1 ID=prot_H-elongata_contig197.5492.1|Name=mRNA_H-elongata_contig197.5492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=130bp LVASQKRIKTLRPYPDETHPNRGEQCLFATCATAEDEVIRVVLSIYVRRGback to top mRNA from alignment at H-elongata_contig197:24319..24708- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig197.5492.1 ID=mRNA_H-elongata_contig197.5492.1|Name=mRNA_H-elongata_contig197.5492.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=390bp|location=Sequence derived from alignment at H-elongata_contig197:24319..24708- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig197:24319..24708- >mRNA_H-elongata_contig197.5492.1 ID=mRNA_H-elongata_contig197.5492.1|Name=mRNA_H-elongata_contig197.5492.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=780bp|location=Sequence derived from alignment at H-elongata_contig197:24319..24708- (Himanthalia elongata Himel1 dioecious)back to top |