mRNA_H-elongata_contig196160.5467.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: D8LEY3_ECTSI (Serine/threonine-protein phosphatase 6 regulatory subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY3_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 4.400e-18 Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 22 PPPSST--NASARFPYMSCEIICCEVADILTAVANDTDTG----PLKKLFSMLDQEGDIDAHRAGYLEKV 213
PPP N +FPYMSCEIICCEV +IL A+A+D G PL+KLFS+LD EGDID+HRAGYLEKV
Sbjct: 60 PPPEGAPDNRVFKFPYMSCEIICCEVPEILKAIASDGAGGGDDCPLRKLFSILDGEGDIDSHRAGYLEKV 129
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: A0A6H5LCR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCR6_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.290e-13 Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 22 PPPSST--NASARFPYMSCEIICCEVADILTAVANDT----DTGPLKKLFSMLDQEGDIDAHRAG 198
PPP N +FPYMSCEIICCEV +IL A+A D D PL+KLFS+LD EGDID+HRAG
Sbjct: 30 PPPEGAPDNRVFKFPYMSCEIICCEVPEILKAIAFDGVGGGDDCPLRKLFSILDGEGDIDSHRAG 94
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: A0A024G6J8_9STRA (Uncharacterized protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024G6J8_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.280e-10 Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 10 VTTSPPPSS-TNASARFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQEGDIDAHRAGYLEKVG 216
++TSP SS + ++PYMSCE+ICC+V ILT + D ++ LFS LD G +D AGY EKVG
Sbjct: 75 ISTSPSDSSDVLRTFKYPYMSCEVICCDVESILTTIVTTGDGQLIESLFSFLDPPGALDTRLAGYFEKVG 144
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: W7TD98_9STRA (Sit4 phosphatase-associated family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD98_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.150e-10 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 22 PPPSSTNASA--RFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQEGDIDAHRAGYLEKV 213
PPP + +FPYM+CE ICCE +L A+ + D L+++FS+LD+EGD+D GY EKV
Sbjct: 74 PPPDGADDKRVHKFPYMACEAICCENDHVLDALVSTRDGEMLRRMFSLLDKEGDLDDRLTGYFEKV 139
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: F0WEH4_9STRA (Serine/threonineprotein phosphatase 6 regulatory subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEH4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.480e-9 Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 52 RFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQEGDIDAHRAGYLEKV 213
++PYMSCE+ICC+V IL+A+ D ++ LFS+LDQ+ +D AGY EKV
Sbjct: 90 KYPYMSCEVICCDVDSILSAIIKTGDGQLIETLFSLLDQQEALDTRLAGYFEKV 143
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: K3WM88_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM88_GLOUD) HSP 1 Score: 57.0 bits (136), Expect = 1.180e-7 Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 28 PSSTNASARFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQEGDIDAHRAGYLEKV 213
PS + ++PYMSCE+ICC++ I +A ++ ++ LF L Q G +D+ AGY EK+
Sbjct: 81 PSDDMRTLKYPYMSCEVICCDIMSITETLAGASEGKIVETLFEFLYQSGPLDSRLAGYFEKI 142
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: A0A7S1BSS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSS7_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.820e-7 Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 52 RFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLD-QEGDIDAHRAGYLEKV 213
R+P+M+CE+ICC V I+ + + D G L KLF +L+ +EG +D AGY E+V
Sbjct: 178 RYPFMACEVICCNVDCIIDGLMEEMDGGVLAKLFEILEWEEGTMDVRLAGYFERV 232
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: A0A835YR29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR29_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.060e-6 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 52 RFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQE-GDIDAHRAGYLEKV 213
++PYM+CEI+CCEV +L A+A L +L SMLDQ G +D AGYLE+
Sbjct: 92 KYPYMACEIVCCEVDRVLAAIAEQP--SHLAQLLSMLDQPPGGLDHRHAGYLEEA 144
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: A0A2R5GLA3_9STRA (Serine/threonine-protein phosphatase 6 regulatory subunit 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLA3_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.070e-6 Identity = 23/54 (42.59%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 52 RFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQEGDIDAHRAGYLEKV 213
RFP+++CE+ICC + I+ + N D L K FS+LD+E +D+ AGY K+
Sbjct: 213 RFPFIACEVICCNLTQIIEPLVNSADL--LSKFFSLLDREPPLDSRLAGYFFKI 264
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Match: A0A6A3YR10_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YR10_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.970e-6 Identity = 24/68 (35.29%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 10 VTTSPPPSSTNASARFPYMSCEIICCEVADILTAVANDTDTGPLKKLFSMLDQEGDIDAHRAGYLEKV 213
V +S PS + ++PYM+CE+ICC++ I + +D ++ L LDQ +D AGY EK+
Sbjct: 76 VESSEDPSDDLRTLKYPYMACEVICCDITSITETLVTASDGAIVETLLGFLDQPALLDPRLAGYFEKI 143 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig196160.5467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig196160.5467.1 >prot_H-elongata_contig196160.5467.1 ID=prot_H-elongata_contig196160.5467.1|Name=mRNA_H-elongata_contig196160.5467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp FVSVTTSPPPSSTNASARFPYMSCEIICCEVADILTAVANDTDTGPLKKLback to top mRNA from alignment at H-elongata_contig196160:297..530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig196160.5467.1 ID=mRNA_H-elongata_contig196160.5467.1|Name=mRNA_H-elongata_contig196160.5467.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=234bp|location=Sequence derived from alignment at H-elongata_contig196160:297..530- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig196160:297..530- >mRNA_H-elongata_contig196160.5467.1 ID=mRNA_H-elongata_contig196160.5467.1|Name=mRNA_H-elongata_contig196160.5467.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=468bp|location=Sequence derived from alignment at H-elongata_contig196160:297..530- (Himanthalia elongata Himel1 dioecious)back to top |