mRNA_H-elongata_contig196.5462.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 669 bits (1727), Expect = 4.170e-215 Identity = 348/730 (47.67%), Postives = 470/730 (64.38%), Query Frame = 1
Query: 1786 DGGAVGSRALDSELTTSDNGRVRIVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNECYDN-DECDFGEKGAPSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNK-DRNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQEE 3969
DGG +GS + DS V+++GS++ + G T FV NTC A+GG +A++ LAV+ +ENV+F+ N A ++GG VFV+GTG G IF F NSAQ + D NPT F C ++GQD F S+F+ N+A GG LRLAGTAS+D CSFV+N+S+ G AVSN+G L ++ F NVFDC +L + S N + A C C D C F P+C + +EH S GG TL++L +E GYWRA+ +S VF C+N AC GGVTG YC +GY+GPYC+VC Y L+F C +CS I +A V ++ + A+ SY +S G G+V + ++IP+QSVKI++VAWQILTQF SVANVT+P+VY+ FL+G+D+ NFDLSW++S GC +++FH RLL +T++P++ + FL TY AV N E+ +Q KHVS+ LLLTF +YSSVS+ +F+ F CE L+D YLRADY+I+CDSS H FQ+YAG M+++Y VGIPA YA LLFR+R L + DR QT +STSDLW+PYKP FYYEVIEC RR+LLAGVVVFI+PNTAAQIA+TL +A FV +SEG+AP+ S+WD+W++R GH VVF SMY+ALLLKV+VS E SQ ++EI LVAAH M++AV+ E ++ S++ E+++E
Sbjct: 536 DGGVIGSFSTDS------------VSNQGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLK--ENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPPVPPTCTDV----MEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAES----LQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQE 1243
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 656 bits (1693), Expect = 6.610e-213 Identity = 354/734 (48.23%), Postives = 468/734 (63.76%), Query Frame = 1
Query: 1783 SDGGAVGSRALDSELTTSDNGRVRIVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNEC-YDNDECDFGEKG-APSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNK-DRNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQEEDP 3975
+DGG VGS LDS + N +GS + + +A++ L+V+ +EN F+ N A+++GG +FV+GT +G F N++ NSAQ + ++ PT F C ++GQD+F S FE N A GGALRLAGTA ++NCSFVEN+S+ G AVSN+G++S+++ F NV+ CQ FL+ E S + A+C+ C + + C F E P C SDA +EH+ S GG TLD L IE GYWRA +S NV EC+N AC GGVTG YC EGY+GPYC+VC Y L C KCS + SI + + ++ + F +A++SY VS E+ G RG+V+ R++P+QSVKI++VAWQILTQF SVAN+ FP+VYQ FL+ ++L NFDL W++S GC +++FH RLL +TIAP+V + FL Y A +HRS E +Q KHVS+ LLLTF VY+SVS+V+FQ FACE LDD K YLRADY IECDS H FQ+YAG MI+LY VGIPA Y LFR+ L +++ DR Q ++ T+DLW+PY+P FYYEVIECARR+LLAGVVVFIYPNTAAQIAV L IA+VF +SE +APY S+WD+W+ R+GHAVV SMY+ALLLKV+VSDE SSQ +FE LVAAH MV V+LE ++ A+S+ EK+ + P
Sbjct: 255 ADGGVVGSFVLDS-----------LYNPQGSYLIVXXXXXXXXXXXXXXXXALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPA---PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKC---SDA-LEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSED----LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQP 966
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 1.830e-202 Identity = 358/747 (47.93%), Postives = 470/747 (62.92%), Query Frame = 1
Query: 1786 DGGAVGSRALDSELTTSDNGRVRIVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSL-AVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNECYDNDE-CDFGEKG-APSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNKDRNQTLV--VSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQ-----EEDPRPRLRRS 3996
DGGA+ S D EL N E S+I I G T F N C +GG + ++ + V + +V F N A+++GG VFV+G G G F N TFT NSAQ + V +++ NPT F C ++G D F ++FE N A GGALRLAGTASI++CSFVEN S+ + G AVSN+G + + F N FDC FL + S + F AVCN C C F + P+C L +EH+ S G TL+ L I++GYWRA + V C++ AC GGVTG YC EGY+GPYC++C Y +SFTCR CS I +A ++ + +A++SY+ S E G GRGIV+ + R+IP+QSVKI+VVAWQI+TQF +VANVT+P+VYQ FL G+++ NFDLSW++S GC ++++FH RLL TI P+ + L TY AV R HR A ++ R KHV M LLLTFFVYSSVS+ +F+ FACE+L+D K YL ADY IECDSS H F++YAG M+LLY GIPA Y+ LLFR+R L + Q L +STSDLW+PYKP FYYEV+ECARR+LLAGVVVFIYPN++AQIA+TL +A FV +SEG+APY S+WD+WI+R+GH VV ASMYLALLLKV+VS E +SSQ +FE LV AH MV+ + E +++AL++R E++ +ED PR R S
Sbjct: 888 DGGAIVSPEFDDEL-----------NLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPP--NPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDL----LEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAV-RIHRG---ATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSS 1613
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 624 bits (1610), Expect = 1.200e-200 Identity = 334/712 (46.91%), Postives = 459/712 (64.47%), Query Frame = 1
Query: 1855 IVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNECYDNDECDFGEKGAPSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNKD-RNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQEEDPRPRL 3987
+++ E S++ I G T FV NT +GG +A++ L++S + +F+ N+A+++GG V+V+ T IG F++V F NSAQ V E DQ + PT F C +SGQD F + F N+A GGALRLAG AS+ NCSFVEN+S+ EG AVSNVG +S I+ T F NVF+C + FL + S + C+ C CD + P + L + H+ S GG+ TL+ L I+ GYWRA N+S V C+N AC GG+TG +YC EGY+GPYC++C +Y L FTC KC ++ I++A ++ + +A++SY+ G + + R++P+Q++KI+VVAWQI+TQF S ANVT+P+VYQ FL G+D+ NFD+SW++S GC ++L+FH RLL +TI P++++ FL TY N + T +Q +HVSM LLL F VYS VSSVVFQ FAC+ L+ YLRADY IECDSS H GF++YAG MILLYPVGIPAFY +LL R+R L K+ D R V+S S+LW+PY+P +YYEVIEC RRILL G+VVFIYPNTAAQIA+TL + +VF LSE + PY WD+W+SRV HAVVF S+Y+ALLLKV+VS+E SSQ++FE LVAAH M++AV++E +++ R ++Q+E P PR+
Sbjct: 311 VLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGN-VKGGENDQLL--PTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYT-SGDALDEACSGCQTT--CDGCVQ--PPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAAT----LQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDE-PAPRV 1009
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 634 bits (1635), Expect = 4.150e-199 Identity = 358/731 (48.97%), Postives = 462/731 (63.20%), Query Frame = 1
Query: 1786 DGGAVGSRALDSELTTSDNGRVRIVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNECYDN-DECDFGEKG-APSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVS-IIIAIVSTLLAIAFGLAILSYLVSAEAG-GAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLL-KNKDRNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQ 3963
DGGAV + AL + S +FI G TIF N+ +GGGMA+ +A++ + +V+FL N+A ++G +FV+ IG FN XXXX ++ D+ D PT F C ++G+D S FE N A GGALRLAG A I NCSF EN S+ EG AVSN+G++S+IT F N FDC F S + F A+CN C D C F E AP C + D H+ S GG TL L I+ G+WRA+ +S V C++ AC GGVTG YC EGY+GPYC +C Y LSF C KCS + I +A+V LL + +A++SY+ S E G G GIV+ +TR+IP+QS+KI++V+WQILTQF SVANVT+P+VYQ L+ +D+ NFDLSW++S GC +++NFH RLL +TI+P+V++ L TY A N E + KHV++ LLLTFFVYSSVSS +F+ FAC+ LD +K YLRADYSIEC+SS H G Q+YAG MI++Y VGIPA YA LLF++R L ++ DR + V S S+LWEPYKP FYYEVIEC RR+LLAGVVVFIYPNTAAQIAVTL IA F LSEG+APY S+WD+WISRVGH VVF SMY+ALLLKV+VSDE SSQE+FE LVA H M++ V++EA + A S+R+E++
Sbjct: 797 DGGAVATNAL---------------STSNSILFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXI-------SIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMD----HSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEK----LNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERR 1497
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 616 bits (1589), Expect = 2.950e-195 Identity = 523/1195 (43.77%), Postives = 655/1195 (54.81%), Query Frame = 1
Query: 709 CSAGVKAEWTIENTQQARALAEAVRCPDGLFNVSWKGKVIIDEPISIGNGTVLIVTSIDADAAIDGDGTTRLFTVQGASLHLRNITLTNG-NASNGGAIFASRSRLTFNHVPFVNNTASKRGGALYISNGAIVSFGGETAF---INXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANASRSGGDTLLSVNDD---VCSGSXXXXXXXXXXXXXXTAI-------------------------------SYFVSNSAESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-AAYGXXXXXXXXXXXXXXXXXXXXXXXADSDGGA---------VGSRALDSELTTS--------------DNGRVRIVNDEG----------------------------------SSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNEC-YDNDECDFGEKG--APSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVS-IIIAIVSTLLAIAFGLAILSYLVSAEA-GGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNK-DRNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQEEDPRPRL 3987
CSA V+ W + ++ +A ALA AV C G F V W+G V+++ PI + +GT++ VT + + A IDG TRLFTV ASLHLRN+ ++ G + + GG I A+ SR+T NH V N A+ GGA+Y SNG+ VS G+TAF XXXXXXXXXXXXXXXXX A +G + +S +DD V SG XXXXXXXXXXXXXX + F +NSA XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX +A G G VG + S T + G V +VN S++ I G T FV NTC SGGG+A L+V ++ VTF N A ++GG VFV+G G+G +F XXX D + +PT F C+ ++GQD F + F NKA GGALR+AGTAS++NCSFV+N+S+ EG A+SN+G++S + + F DNVFDC FL S + F AVC C D C F E+G P+C + + H+ S GG TTL E+ I+ GYWRA + S V ECF AC GGVTG YC EGY+GPYCS+C Y + L F+C KCS I++ SY++S + GGA G+V+ M R IP+QSVKI++V+WQILTQF SVANVT+P+VYQ FL+ +D+ NFDLSW+ STGC +++FH RLL +TI+PLV++ FL T AV R +R ++ QKHVSM LLLTF VYS+VSSV+FQ FACE L D K YLR+DY IECDSS H FQ+YAG MI+LYPVGIPA YA LLFR+R L K++ +R V+STS LWEPYKP FYYE+ AVTL IA+ F LSE + PY S+WD+W SR+GH VV SMY+ALLLKV+VSDE SSQ +FE LVA H MV V++E +I+++S+R K+ E PRPRL
Sbjct: 39 CSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGSTAVIDGHAATRLFTVVDASLHLRNVNISYGASRAVGGGIAAAGSRVTLNHTSIVGNRATGHGGAVYASNGSTVSCLGDTAFNXXXXXXXXXXXXXXXXXXXXXGAAWLGNVAGDSGGAIYAGNGSSVSWSDDAVFVESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTFTNNSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVYVQTASSISWAGHAESVFDGNQALIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEVGSGCNASFGGNXXXXXXSAVGDPGILESGFGGALLVVGRELPAGVFLGGSTAFVGNFAEKVGGGLVASYATAAWGXXXXXXXXXXXXXXGAVFVVNGSSVXXXXXXXXXXXXXXXXXXXVASPILDSVYNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGF--FDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVF-EQGLVGPACSEV----MAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACT-NAAVARTNRGSPQNLQ--NNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPRL 1199
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 595 bits (1534), Expect = 5.640e-186 Identity = 322/686 (46.94%), Postives = 425/686 (61.95%), Query Frame = 1
Query: 1786 DGGAVGSRALDSELTTSDNGRVRIVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESE-NVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNECYDNDECD-FGEKGAPSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNKDRNQTLV---VSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLK 3828
DGGA+ S LDSE S+ S++ G T F N C +GGGMA+ A+ ++E ++F+ N A++SGG VFV+ G G+ F +F NSAQ + V++++ NPT F C ++G D F ++FE N A GGALRLAGTASI NCSFVEN S G AVSN+G +S+ F N FDC FL + S + F VC+ C F E P + + +EH+ SP G TL+ L I+ GYWRA S V C++ AC GGVTG YC EGY+GPYC+VC + FTCR+CS I++A+ + I + ++SY+ S + G G+GIV+ + +IP+QSVKI+VVAWQ++TQF VAN+T+P+VYQTFL+G+ L NFDL WI+S GC +++FH RLL +TI P++++ L TY A + + +T + Q KHV + LLL+FFVYSSVSS +F+ FACE+L D K YLRADY IECDSS H GF++YAGIM+L+Y VGIP Y LL+R+R LK +D Q V+STSDLW+PY+P FYYEVIEC RR+LLAGVVVFIYPN+ AQIA+TL IA VFV +SE ++PY S+WD+WISR GH VV SMY+ALLLK
Sbjct: 697 DGGAIVSPQLDSEYNPSE-----------STLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPP--NPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAE---PLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTL---QNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRD-FLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 587 bits (1513), Expect = 2.980e-182 Identity = 322/722 (44.60%), Postives = 440/722 (60.94%), Query Frame = 1
Query: 1786 DGGAVGSRALDSELTTSDNGRVRIVNDEGSSIFIKGATIFVQNTCRASGGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKN-TFSAVCNEC-YDNDECDFGEKGA-PSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNK-DRNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMA 3939
+GGA+ S + DSE N SS+ I G T F NTC +GG +A+ + ++ + +V+F N+A +GG VFV+G GIG F++V+F N AQ D PTKF C ++GQD S F+ N A VGGALRLAG +S EG AVSN+G +S + + F N F C + FL+++ + N TF AVC+ C D C F E A P+C + D H S GG TL+ L I+ GYWRA ++S + C+N AC GGVTG YC E Y+GPYCS+C Y +L ++C KC S++ I+ A+ +LA+ + ++ Y++S EAG +++ + ++P+QSVKI++V+WQILTQFAS ANV +P VYQ FL+G+ + FDL W++S GC L++ FH RLL TI P+ ++ L TY A N + E ++ KHV + LLLTF VYSSVSS +F+ FAC+ L+D K YLR DY IECDSS H FQ+YAG MILLYP+GIP Y+ LLF++R L K+K DR+ + V STS+LW+PYKP FYYEVIEC RRILL G+VVFIYPNTAAQ+A+TL +A F LSE ++PY S+W++W++R+GH VV SMY+ALLLKV+VSDE SQ +FE LV H M+++V++E ++A
Sbjct: 706 EGGAMMSPSYDSEY-----------NPLESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGN----DRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMD----HGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEK----LRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 597 bits (1540), Expect = 4.630e-181 Identity = 321/677 (47.42%), Postives = 428/677 (63.22%), Query Frame = 1
Query: 1930 GGGMAIVQSLAVSFESENVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQFEPSKNTFSAVCNECY---DNDECDFGEKGAPSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQTVSIIIAIVSTLLAIAFGLAILSYLVSAEAGGAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKN-KDRNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSV 3948
GGG L V F + V F N A+++GG VFV+G +G + ++V F N AQ + NPT F C ++GQD F F GGALRLAGTA+++NCSFVEN+SE G AVSN+G +S + +R NVF C L FL F S + A C+ C D+D C F E P + + +EH S GG + L ++ G+WRA +++V C+N AC GVT C +GY+GPYCS+C Y LSF C +CS II+A ++A+ +A++SY+VS + G RG V+ + R+IP+QS KI+VV+WQILTQF +VANVT+P+VYQ FL+G+ + NFDLSW++S GC + ++FH RLL +TI P+V++ FL TY A N + ET +Q +HVSM LLLT FVYSSVSS +FQ FACESL D + YLRADY I CDSS H Q+YAG+M+++Y VGIPA Y LLFR+R L ++ DR +T V STS+LW+PYKP FYYEVIEC RR+LLAGVVVFIYPNTA QIA+TL +A FV +SEG+APY S+WD+W+SR+GHAVVF SMY+ALLLKV+VS+E SQ +FE+ LVAAH M++ +++E V++ ++
Sbjct: 1387 GGG------LHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLK--EYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-FEE---PPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATET----LQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 588 bits (1517), Expect = 4.640e-181 Identity = 328/672 (48.81%), Postives = 427/672 (63.54%), Query Frame = 1
Query: 1981 NVTFLRNNASISGGGVFVTGTGIGVIFNNVTFTENSAQXXXXXXXXXXXXAVTVDEVDQQVDNPTKFIGCTXXXXXXXXXXXXXXXSSGQDEFTQSSFERNKARVGGALRLAGTASIDNCSFVENMSEPDEGPAVSNVGYLSAITYTVFRDNVFDCQLEEFLQF-EPSKNTFSAVCNECYDNDE-CDFGEKG-APSCISLSDANVEHAMSPGGITTLDELEIESGYWRAANNSLNVFECFNGGACNGGVTGEPKYCNEGYKGPYCSVCERNYVRSLSFTCRKCSSQT----VSIIIAIVSTLLAIAFGLAILSYLVSAEAG-GAGRGIVDSMTRWIPMQSVKIIVVAWQILTQFASVANVTFPNVYQTFLEGVDLLNFDLSWIVSTGCFLELNFHHRLLWTTIAPLVSMCFLGVTYTIAVHRNHRSFETAIRAIQTARQKHVSMALLLTFFVYSSVSSVVFQMFACESLDDNKRYLRADYSIECDSSTHHGFQIYAGIMILLYPVGIPAFYASLLFRNRSQLLKNKD-RNQTLVVSSTSDLWEPYKPQRFYYEVIECARRILLAGVVVFIYPNTAAQIAVTLAIAIVFVFLSEGMAPYESQWDSWISRVGHAVVFASMYLALLLKVNVSDEANSSQEMFEITLVAAHGFMVIAVILEAVIMALSVRKEKQEE 3969
+++F+ N+A ++GG +F++G G IF V FT N A+ + DNPT F C ++G+D F S FE N A GGALRLAG A NCSFV N ++ EG AVSN+GY+SA+ F N FDC+ +L F + S + F +C+ C E C F E P+C + +EHA S GG TL+ L I+SGYWRA +S +V C++ AC GGVT YC EGY+GPYCSVC Y L F C KC + V +++ V T + +A AI SY+ S E G G G G ++ +TR+IP+QSVKI++ AWQILTQF S+ANVT+P+VY+ FL +D+ NFDL W +S C ++++FH RLL +TI+P+ ++ FL TY A R +T + A+Q KH SM LLLTFFVYSSVSS++F+ FACE L D K YLR+DY IECDSS H GFQ+YA MIL+Y VGIPA YA LLFR+R L ++ R V+S +DLWEPY FYYEVIEC RR+LLAGVVVFIYPNTAAQIAVTL IA FV +SE + PY+S WD WI+R+GH VVF+SM+L LLLKVNVSDE +SQ +FEI LVA H MV+A+++E V++ +R E ++E
Sbjct: 956 DISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGIEPSGG------DNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEV----MEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLA---AIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDT-LGAVQ---HKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLRAELKKE 1610 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig196.5462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig196.5462.1 >prot_H-elongata_contig196.5462.1 ID=prot_H-elongata_contig196.5462.1|Name=mRNA_H-elongata_contig196.5462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1332bp MVGSKTAYAFLLLGLVDAGTRAEDAYCNGLSDTIGDGVCDMENNNEVCGYback to top mRNA from alignment at H-elongata_contig196:5862..11987- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig196.5462.1 ID=mRNA_H-elongata_contig196.5462.1|Name=mRNA_H-elongata_contig196.5462.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6126bp|location=Sequence derived from alignment at H-elongata_contig196:5862..11987- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig196:5862..11987- >mRNA_H-elongata_contig196.5462.1 ID=mRNA_H-elongata_contig196.5462.1|Name=mRNA_H-elongata_contig196.5462.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7992bp|location=Sequence derived from alignment at H-elongata_contig196:5862..11987- (Himanthalia elongata Himel1 dioecious)back to top |