mRNA_H-elongata_contig19519.5439.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: D8LK18_ECTSI (Aldehyde dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK18_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 5.230e-126 Identity = 252/498 (50.60%), Postives = 298/498 (59.84%), Query Frame = 1
Query: 1 SAGELRDELNPLGVHVEPFVEGVEDSRDEGQAE-ITEEEKQRRAAEHFSMFRLDGATGNVVWSHVARAHLEDQRRGPRGRGTGXXXXXXXXXXXGRQGIQPFPPGRQNPSVADDRRGRA------------GVGGGGRSVKAVVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKPNSRLAP-NFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSL---------------------AKRGSRSDVVFAVSSGVVSCYDDEGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVPFRLRVDDAAEGNAAA---SFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAM 1380
S G D +PLGVHVE FVEG EDSRD + E ++EEEK RRAAEHFS+F LDG TG V WSH AH Q + XXXX G PG + + + G A G GGG RTR+GLEAVELSTGKPLS+V LP A AG Y DLNGDGVVDHVQAVGTRG +GWGH+H G+A+GH S + PS Q AR R LPPCYALAV+GLPPREQLFN S+CH GAL E+ ERL+KPNSR + + + +VGA++PA++ R +A + +R D VFAVSSGVVS YDDEGRLKWQDRRGPKW+ NGG GYVVPF L V G S AEERI+VVG +K+CVYDR GRL+G + + PSQ PV+GDFDGDG+ D++V+G G AGY LAPDPG+RA+FVAVL L+ AM
Sbjct: 201 SGGSPVDGADPLGVHVEAFVEGEEDSRDTVEEEKMSEEEKGRRAAEHFSLFALDGETGEVRWSHGGGAHHGAQDKXXXXXXXXXXXXGIRDYDYFDFGFDLDYPGFGDDLLYNQTEGAAAALAFEGLAAVAGAVGGGSG-----QRTRDGLEAVELSTGKPLSAVALPAAAGTDAG-VYVDLNGDGVVDHVQAVGTRGGQGWGHLHEGVAMGHLSEEPTPS-QPAR--RFLPPCYALAVSGLPPREQLFNASLCHDAGALFEVQERLSKPNSRSSSRSLDLEVGAASPAIIPRDSAGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWGEGPARFDAVFAVSSGVVSSYDDEGRLKWQDRRGPKWTRKDTEGGDPSNGG-----GYVVPFTLEVGWPGRGRGRIINPSPGAEERILVVGQDKMCVYDRGGRLAGSTPLAAPPSQRPVLGDFDGDGVADVLVVGWSGAVAGYALAPDPGVRAMFVAVLALVAAM 684
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A6H5JP99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP99_9PHAE) HSP 1 Score: 314 bits (804), Expect = 4.410e-93 Identity = 239/626 (38.18%), Postives = 293/626 (46.81%), Query Frame = 1
Query: 1 SAGELRDELNPLGVHVEPFVEGVEDSRDEGQAE-ITEEEKQRRAAEHFSMFRLDGATGNVVWSHVARAHLEDQRRGPRGRGTGXXXXXXXXXXX---------------------------------------GRQG----IQPFPPGRQNPS------VADDRRG----RAGVGGGG---------------------------------RSVKAVVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKPNSRLAP-NFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAK---------------------------------------------------------------------RGSRSDVVFAVSSGVVSCYDDEGRLKWQDR-----RGPKWSFPQEVPTAAGNGGDDFAGGYVVPFRLRVDDAAEGNAAASFL---AEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAML 1383
S G + D +PLGVHVE FVEG EDSRD + E ++ EEK +RAAEHFS+F LDG TG V WSH AH Q + G G+G GRQ + P PS A RRG R GV GG V+ V+ARTR+GLEAVELSTGKPLS+V LP AT AG Y DLNGDGVVDHVQAVGTRG +GWGH+H G+A+G+ S + PS Q R LPPCYALAV+GLPPREQLFN S+CH GAL E+ ERL+KPNSR + + + +VG ++PA++ RG A A G RGSR A+ GV C + G + + R G W+ A G GGYVVPF L V G + AEERI+V+G +K+CVYDR GRL+G + + PSQ PV+GDFDGDG+ D++++G G AGY LAPDPG+RA+FVAVL L+ AML
Sbjct: 233 SGGSVVDGADPLGVHVEAFVEGEEDSRDTAEEEKMSAEEKGKRAAEHFSLFALDGETGEVRWSHGGGAHHGAQDK-QNGGGSGIRDYDYFDFGFDLDYPGFGGDLLSNQTEGTAAALAFEGLAAVAGAVGGGGGRQYRRSLLNHLPHAWSAPSDTRLEITALHRRGTGDRRNGVSAGGVVGEGGGEDHPXXXXXXXXXXXXXXXXXXXXXXGLVRVVLARTRDGLEAVELSTGKPLSAVALPAATGTDAG-VYVDLNGDGVVDHVQAVGTRGGQGWGHLHEGVAMGYLSEEPTPS-QPQPARRFLPPCYALAVSGLPPREQLFNASLCHDAGALFEVQERLSKPNSRSSSRSLDLEVGVASPAIIQRGSAGAGAATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGXXXXXXXXXXXXXXXXRGSR-----ALRRGV--CREQRGSEQLRRRGAAKVAGSPWAQVDPERWGAEGGDPSNGGGYVVPFTLEVGWLGRGRRRITNPPPGAEERILVLGQDKMCVYDRGGRLAGSIPLAAPPSQRPVLGDFDGDGVADVLIVGWSGAVAGYALAPDPGVRAMFVAVLALVAAML 848
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A7S2B999_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B999_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.500e-30 Identity = 112/379 (29.55%), Postives = 175/379 (46.17%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRR----LPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKP-NSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYDDEGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVPFRLRVDDAAEGNAAASFLAE----ERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALF---VAVLVLIGAMLVVAAVYVPPPSSSVRGLGWGGGRRRVVWKSKRATD 1488
V A + G+EAV L GKP+ ++ LP GG YAD+NGD ++DH+ V H+ S SG A R LPPC A+A++G+P REQLFNGS+C G+LL + +R + N + + +V + P + R ++LG ++ D +FAVSSGVV+ Y +G L WQ ++ P W G A F+++ + I+V G+++V ++ G + +++ AP + P++ D +GDG +D+V++ +G + GY L+ PG F V +L L +L + V P+S G RVV KS R+TD
Sbjct: 128 VFAYSEHGVEAVTLHHGKPVFALALP------KGGLYADVNGDNLIDHLSVVEQH--------HANQDNPASPTLSHLSGSAVHARVRDHGLLPPCSAVALSGIPAREQLFNGSLCDHHGSLLSLRDRQERVFNRKRRMSNHEEVRGAEPITVERP------QFLGRLVAQHAVTSAPKFYDTIFAVSSGVVTSYRSDGELNWQVQKAPVW----------------------------------GENALGFISQLPRQDEILVTGEDQVMLFSPTGSILASSKLAQAPLRRPLLVDANGDGAIDVVIVTEGAVW-GYALSYSPGGGGAFRLLVTLLALCMVLLFFMTLEVDDPTSRK-------GHTRVV-KSHRSTD 443
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A6U3ESI5_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A6U3ESI5_9CHLO) HSP 1 Score: 124 bits (312), Expect = 1.710e-27 Identity = 98/307 (31.92%), Postives = 138/307 (44.95%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGER-LN-KPNSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYDDEGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVPFRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGL 1302
VVA EG+E + L +G+ L + LP G + D+NGDGVVDH++A G+ G +G GH G G +P C+A A +G+P RE LFNGSIC G + G R +N +P+ A N +V +APAVL RG +V SL R + D+VF S G V+CY G +W R W+ GG D A +P R G A E ++ VG + + G ++ + P P + D DGDG+ DLV+ + G+
Sbjct: 80 VVAHQEEGIEVLHLFSGRTLCKMLLPPP------GLHVDVNGDGVVDHIEAHGSAGGDGGGHAAVGA-----------------DGHAVPACWAQATSGVPAREHLFNGSICRGASGVTRHGSRHMNGEPSGGYAANAHVEV--AAPAVLRRGEET----------VVRSL--RRAVKDMVFLNSRGEVTCYTHAGHRRWLQRTEASWA----------RGGGDHASLTTLPLR-------PGGAV------EVVLAVGASHATLLTPSGYKLASLRLPAPPIAPATIADVDGDGLHDLVLRTRTGV 326
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A7I8K498_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K498_SPIIN) HSP 1 Score: 123 bits (309), Expect = 6.140e-26 Identity = 108/342 (31.58%), Postives = 162/342 (47.37%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKPNSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYD-----DEGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVPFRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAMLVVAAV 1398
VVA +EG+EA+ L++G+ L + LP GG +AD+NGDGV+DHVQAVG RG+E Q+ SG L PC+A+A +G+P REQLFN SIC L + +F G +A A ++ + +A+ L + G ++GS DV+F + G ++ Y ++ +WQ G W+ P P+ AG + FRLR D E +I GD + V G + + +AP+ V+GDF GDG+ D+++ GG+ G+V PG A+F + LV G ++VV V
Sbjct: 399 VVAHEKEGIEAIHLASGRTLCKLHLP------EGGLHADINGDGVLDHVQAVGGRGVE----------------QTVVSGSM----EVLRPCWAVATSGVPVREQLFNVSICQHAHFNLFYH----------SGDFARTFGRAAAAADTQSLEVATPILL--PRPDGHRHRKGSHGDVIFLNNRGEMTAYSPGLHGEDAVWRWQITTGASWTNP---PSPAGMAEAAAVVPTLKAFRLRAGDQ-----------REVVIAAGDQEAAVVSPGGVVLASVDLPAAPTHALVLGDFSGDGLADIILQTSGGVY-GFVQTRQPG--AIFFSGLV--GCLIVVMGV 683
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A5P1F657_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F657_ASPOF) HSP 1 Score: 123 bits (308), Expect = 7.240e-26 Identity = 115/346 (33.24%), Postives = 162/346 (46.82%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKPNSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYDD----EGRL-KWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVP----FRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAMLVVAAV 1398
VVA +EG+EAV L++G+ + + LP GG +AD+NGDGV+DHVQ VG GH + Q +G L PC+A+A +G+P REQLFN SICH AL + + ++ R DVG L P+ + G KR S DVVF + G V+ Y EG + +WQ G WS +P+ +G D VVP FRLR+ D E II GD + + G + ++ +P+ V+ DF GDG+ D+V+L GG+ G+V PG ALF + LV G ++V+ V
Sbjct: 366 VVAHQKEGIEAVHLASGRTICKLHLP------EGGLHADINGDGVLDHVQVVG----------------GHGAEQRVVTGSM----EVLKPCWAIATSGVPVREQLFNASICHH--ALFNLFQHDSRSFGR-----SVDVG-----TLEVATPIL------VHRDDGQKHKRRSHGDVVFLTNRGEVTSYSPGLHGEGAIWRWQLTSGATWS---NLPSPSGMMEDA-----VVPTLKSFRLRIHDH-----------HEVIIAGGDQEAVIISPRGSMLATIELPESPTHSLVLEDFTGDGLTDIVLLTSGGVY-GFVQVRQPG--ALFFSTLV--GCLIVIMGV 643
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A836CMR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMR8_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.660e-25 Identity = 105/311 (33.76%), Postives = 147/311 (47.27%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAA-RQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKPNSRLAP---NFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRS--DVVFAVSSGVVSCYDDEGRLKWQDRRGPKWSFPQEVPTAAGNGGDDF---AGGYVVPFRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYD-RDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLG 1290
V+ T G+EAV L TG+P+ + LP+A G A+AD+NGDGV+D V A G+ + S AA R+G C A+A++G+PP LFNG+IC A+ P++R A A+ +APA L VP A+ R+ D VFA+S G VS Y +GRL WQ R GP+W + G+GG GGY+ L G + I+V G+ +V VY R GR+ G+A + P+ PPVVGD D DG D++++G
Sbjct: 423 VLTHTAHGVEAVALDTGRPVCA--LPLAAPRGQAAAFADVNGDGVIDRVGAA--EGVAAXXXXXXXXXXXXXXXHNLASDVAALRRG-----CTAVALSGVPPATPLFNGTICADAAAV---------PSARAAAAAFTRGAERVVAAPA-LPLLVPRAAXXXXXXXXXXXXXXXXPPRAPMDTVFAMSEGTVSSYAPDGRLNWQARNGPRWRAGDD-----GDGGSATPPGTGGYLALLPL-ARGFIGGXXXXXXAGDVGIVVAGEAEVVVYAARTGRVLGRAALPEPPALPPVVGDLDNDGAADVLLVG 708
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A2I0KNH0_PUNGR (uncharacterized protein LOC116199188 n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0KNH0_PUNGR) HSP 1 Score: 120 bits (300), Expect = 8.070e-25 Identity = 116/359 (32.31%), Postives = 167/359 (46.52%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSIC-HGGGALLEIGERLNKPNSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYDD-----EGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVP----FRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAMLVVAAV-YVPPPSSSVRG 1431
VVA +EG+EAV L++G+ + + L GG +AD+NGDGV+DHVQAVG G E Q+ SG L PC+A+A +G+P REQLFN SIC H L + G+ + N A + + L P+ K G +RGS DVVF + G VSCY + +WQ + G W+ +P+ +G GG VVP F LR DA +E I+ GD + V G + + + P+ V+ DF DG+ DL+++ G+ G+V PG ALF + LV G ++VV V +V +S++G
Sbjct: 396 VVAHQKEGIEAVHLASGRTVCKLHLQ------EGGLHADINGDGVLDHVQAVGGYGAE----------------QTVVSGSM----EVLRPCWAVATSGVPVREQLFNVSICRHSPLNLFQYGDIVR--NFGRAHDLNS---------LEVATPIL------IPKNDGHKHRRGSHGDVVFLTNRGEVSCYKPGIHGHDAIWQWQLQTGATWT---NLPSPSGM----MEGGNVVPTLKPFALRSHDA-----------QEFILAAGDQEAVVLSSGGSIQATIDLPAPPTHAIVMEDFSNDGLTDLILVTSNGVY-GFVQTRQPG--ALFFSTLV--GCLIVVMGVIFVTQHLNSIKG 688
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: A0A5A7Q8L4_STRAF (FG-GAP repeat-containing protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7Q8L4_STRAF) HSP 1 Score: 119 bits (298), Expect = 1.680e-24 Identity = 108/342 (31.58%), Postives = 151/342 (44.15%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGALLEIGERLNKPNSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYDD-----EGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVPFRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAMLVVAAV 1398
VVA +EG+EA+ L+TG+ L + L GG +AD+NGDGV+DHVQ VG G E Q+ SG L PC+A+A +G+P REQLFN SICH L ++ R +V + P ++ R G ++GSR DVVF + G V+ Y + WQ G WS +P+ +G + PF LR D +AE I+ GD + V G + + P+ V DF GDG+ D+V++ G+ G+V PG ALF + LV G +LVV V
Sbjct: 467 VVAHEKEGIEAIHLATGRTLCQLHLQ------EGGLHADINGDGVLDHVQVVGANGAE----------------QTVVSGSM----EVLRPCWAVATSGVPVREQLFNASICHHSPFNLFQHGDFSRSYGRHVDTSSLEV--ATPILIPR--------------KDGHRHRKGSRGDVVFLTNRGEVTSYSPGLHGHDAIWNWQISTGATWS---NLPSLSGLVESPAVVPTLKPFPLRTHDT---------VAEPLILAAGDQEAVVLSPGGSTLAAFDLPAPPTHALVCQDFSGDGLTDIVLVTSSGIY-GFVQTRQPG--ALFFSTLV--GCLLVVMGV 749
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Match: UPI000C1CE79E (uncharacterized protein LOC111373976 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE79E) HSP 1 Score: 119 bits (297), Expect = 1.910e-24 Identity = 111/347 (31.99%), Postives = 156/347 (44.96%), Query Frame = 1
Query: 388 VVARTREGLEAVELSTGKPLSSVTLPVATTLGAGGAYADLNGDGVVDHVQAVGTRGMEGWGHVHSGMAIGHPSAQSWPSGQAARQGRRLPPCYALAVTGLPPREQLFNGSICHGGGA-LLEIGERLNKPNSRLAPNFEADVGASAPAVLSRGVPLASAKYLGTAKMVGSLAKRGSRSDVVFAVSSGVVSCYDD-----EGRLKWQDRRGPKWSFPQEVPTAAGNGGDDFAGGYVVP----FRLRVDDAAEGNAAASFLAEERIIVVGDNKVCVYDRDGRLSGQAQIVSAPSQPPVVGDFDGDGIMDLVVLGKGGLAAGYVLAPDPGIRALFVAVLVLIGAMLVVAAV 1398
VVA REG+EAV L++G+ L + L GG +AD+NGDGV+DHVQ VG G+E V M + H C+A+A +G+P REQLFN SICH L + GE + L N + + P +++R G ++GS DVVF S G V+ Y + WQ G WS P P+ +G G VVP F LRV D+ +E I+ GD + V G L + + P+ V DF DG+ D++++ G+ G+V PG ALF + LV G +++V AV
Sbjct: 396 VVAHQREGIEAVHLASGRTLCKLHLQ------EGGLHADINGDGVLDHVQVVGRNGVE---TVSGSMEVLHR-------------------CWAVATSGVPVREQLFNASICHYSPFNLFQHGEFSRSFSQNLDVN---SLEVATPILVARND--------------GHRHRKGSHGDVVFLTSRGEVTSYSPGVHGHDAEWNWQLLTGATWSNP---PSPSGM----MEAGAVVPTLKAFPLRVHDS-----------QELILAAGDQEAVVLSPGGSLLTSFDLPAPPTHALVCDDFSNDGLTDVILVTSNGVY-GFVQTRQPG--ALFFSTLV--GCLIIVMAV 674 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19519.5439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19519.5439.1 >prot_H-elongata_contig19519.5439.1 ID=prot_H-elongata_contig19519.5439.1|Name=mRNA_H-elongata_contig19519.5439.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp MFRLDGATGNVVWSHVARAHLEDQRRGPRGRGTGGDGRDGGGNGNGRQGIback to top mRNA from alignment at H-elongata_contig19519:1007..6841- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19519.5439.1 ID=mRNA_H-elongata_contig19519.5439.1|Name=mRNA_H-elongata_contig19519.5439.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5835bp|location=Sequence derived from alignment at H-elongata_contig19519:1007..6841- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19519:1007..6841- >mRNA_H-elongata_contig19519.5439.1 ID=mRNA_H-elongata_contig19519.5439.1|Name=mRNA_H-elongata_contig19519.5439.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2694bp|location=Sequence derived from alignment at H-elongata_contig19519:1007..6841- (Himanthalia elongata Himel1 dioecious)back to top |